NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F098888

Metagenome / Metatranscriptome Family F098888

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F098888
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 91 residues
Representative Sequence MEHEPYGFMERELAFKLLASHALVDSEFFSWLRDDPENAAAHLHIRLTDSDIDYLKNQVEWGRIEEIADPIRESLHLDLVTNSW
Number of Associated Samples 91
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 82.52 %
% of genes near scaffold ends (potentially truncated) 29.13 %
% of genes from short scaffolds (< 2000 bps) 83.50 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(13.592 % of family members)
Environment Ontology (ENVO) Unclassified
(28.155 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(33.981 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 55.36%    β-sheet: 0.00%    Coil/Unstructured: 44.64%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.78
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Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.104.1.0: automated matchesd6dcda_6dcd0.60549
d.163.1.1: Lambda integrase-like, catalytic cored1a0pa21a0p0.60328
a.104.1.1: Cytochrome P450d1jfba_1jfb0.57678
a.104.1.0: automated matchesd6kfwa16kfw0.57593
a.104.1.0: automated matchesd5hdia_5hdi0.57449

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF06094GGACT 4.85
PF01244Peptidase_M19 4.85
PF04075F420H2_quin_red 3.88
PF12680SnoaL_2 2.91
PF11716MDMPI_N 2.91
PF04542Sigma70_r2 1.94
PF07661MORN_2 1.94
PF02824TGS 1.94
PF12840HTH_20 1.94
PF00072Response_reg 0.97
PF02604PhdYeFM_antitox 0.97
PF12802MarR_2 0.97
PF08281Sigma70_r4_2 0.97
PF01522Polysacc_deac_1 0.97
PF00486Trans_reg_C 0.97
PF07466DUF1517 0.97
PF11796DUF3323 0.97
PF05088Bac_GDH 0.97
PF02954HTH_8 0.97
PF12724Flavodoxin_5 0.97
PF01850PIN 0.97
PF08020DUF1706 0.97
PF01161PBP 0.97
PF01135PCMT 0.97
PF11159DUF2939 0.97
PF12186AcylCoA_dehyd_C 0.97
PF09339HTH_IclR 0.97
PF07883Cupin_2 0.97
PF02706Wzz 0.97
PF04073tRNA_edit 0.97
PF07732Cu-oxidase_3 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG2355Zn-dependent dipeptidase, microsomal dipeptidase homologPosttranslational modification, protein turnover, chaperones [O] 4.85
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 1.94
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 1.94
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 1.94
COG2849Antitoxin component YwqK of the YwqJK toxin-antitoxin moduleDefense mechanisms [V] 1.94
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 1.94
COG0726Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 familyCell wall/membrane/envelope biogenesis [M] 0.97
COG1881Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) familyGeneral function prediction only [R] 0.97
COG2132Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)Cell cycle control, cell division, chromosome partitioning [D] 0.97
COG2161Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM familyDefense mechanisms [V] 0.97
COG2226Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenGCoenzyme transport and metabolism [H] 0.97
COG2518Protein-L-isoaspartate O-methyltransferasePosttranslational modification, protein turnover, chaperones [O] 0.97
COG2519tRNA A58 N-methylase Trm61Translation, ribosomal structure and biogenesis [J] 0.97
COG2902NAD-specific glutamate dehydrogenaseAmino acid transport and metabolism [E] 0.97
COG3206Exopolysaccharide export protein/domain GumC/Wzc1Cell wall/membrane/envelope biogenesis [M] 0.97
COG3524Capsule polysaccharide export protein KpsE/RkpRCell wall/membrane/envelope biogenesis [M] 0.97
COG3765LPS O-antigen chain length determinant protein, WzzB/FepE familyCell wall/membrane/envelope biogenesis [M] 0.97
COG3944Capsular polysaccharide biosynthesis protein YveKCell wall/membrane/envelope biogenesis [M] 0.97
COG4118Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressorDefense mechanisms [V] 0.97
COG4122tRNA 5-hydroxyU34 O-methylase TrmR/YrrMTranslation, ribosomal structure and biogenesis [J] 0.97
COG4283Uncharacterized conserved protein DfsB/IRC4, DUF1706 (PF08020) domainGeneral function prediction only [R] 0.97

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908032|Perma_A_C_ConsensusfromContig22788All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium910Open in IMG/M
2199352025|deepsgr__Contig_79829All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1059Open in IMG/M
3300000956|JGI10216J12902_103084871All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300000956|JGI10216J12902_115783878All Organisms → cellular organisms → Bacteria856Open in IMG/M
3300000956|JGI10216J12902_123320892All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_69_14790Open in IMG/M
3300001664|P5cmW16_1076589All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300003319|soilL2_10127069All Organisms → cellular organisms → Bacteria2664Open in IMG/M
3300003993|Ga0055468_10130698All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300004114|Ga0062593_100649562All Organisms → cellular organisms → Bacteria1017Open in IMG/M
3300004463|Ga0063356_100339142All Organisms → cellular organisms → Bacteria1891Open in IMG/M
3300004479|Ga0062595_100533005All Organisms → cellular organisms → Bacteria893Open in IMG/M
3300004479|Ga0062595_100589861All Organisms → cellular organisms → Bacteria862Open in IMG/M
3300004479|Ga0062595_100820693All Organisms → cellular organisms → Bacteria769Open in IMG/M
3300004778|Ga0062383_10350922All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia718Open in IMG/M
3300004782|Ga0062382_10166293All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia943Open in IMG/M
3300005093|Ga0062594_100504717All Organisms → cellular organisms → Bacteria1024Open in IMG/M
3300005093|Ga0062594_100755999All Organisms → cellular organisms → Bacteria889Open in IMG/M
3300005179|Ga0066684_10261087All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1140Open in IMG/M
3300005343|Ga0070687_100543123All Organisms → cellular organisms → Bacteria789Open in IMG/M
3300005440|Ga0070705_100065052All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2181Open in IMG/M
3300005445|Ga0070708_100014153All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia6556Open in IMG/M
3300005445|Ga0070708_100096090All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2706Open in IMG/M
3300005467|Ga0070706_101045011All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium753Open in IMG/M
3300005468|Ga0070707_100484462All Organisms → cellular organisms → Bacteria1198Open in IMG/M
3300005468|Ga0070707_100853211All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium875Open in IMG/M
3300005518|Ga0070699_100169267All Organisms → cellular organisms → Bacteria1935Open in IMG/M
3300005535|Ga0070684_100805404All Organisms → cellular organisms → Bacteria878Open in IMG/M
3300005546|Ga0070696_100424533All Organisms → cellular organisms → Bacteria → Proteobacteria1044Open in IMG/M
3300005559|Ga0066700_10937216All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300005614|Ga0068856_100868735All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium921Open in IMG/M
3300005713|Ga0066905_101245176All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria667Open in IMG/M
3300006049|Ga0075417_10115287All Organisms → cellular organisms → Bacteria1229Open in IMG/M
3300006806|Ga0079220_10230802All Organisms → cellular organisms → Bacteria → Proteobacteria1093Open in IMG/M
3300006865|Ga0073934_10164827All Organisms → cellular organisms → Bacteria1555Open in IMG/M
3300006969|Ga0075419_10258129All Organisms → cellular organisms → Bacteria1166Open in IMG/M
3300007004|Ga0079218_12980672All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300009131|Ga0115027_10037449All Organisms → cellular organisms → Bacteria2365Open in IMG/M
3300010041|Ga0126312_11269471All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300010371|Ga0134125_11671738All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300010399|Ga0134127_10048597All Organisms → cellular organisms → Bacteria3501Open in IMG/M
3300010401|Ga0134121_11346225All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium722Open in IMG/M
3300010403|Ga0134123_10188639All Organisms → cellular organisms → Bacteria1744Open in IMG/M
3300012092|Ga0136621_1007096All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi4632Open in IMG/M
3300012212|Ga0150985_111185570All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300012360|Ga0137375_10836942All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium737Open in IMG/M
3300012681|Ga0136613_10726495All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300012931|Ga0153915_10181221All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2302Open in IMG/M
3300013297|Ga0157378_11298072All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium769Open in IMG/M
3300013772|Ga0120158_10254298All Organisms → cellular organisms → Bacteria877Open in IMG/M
3300013772|Ga0120158_10340984All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300014326|Ga0157380_12497839All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300015158|Ga0167622_1070342All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300015371|Ga0132258_10043377All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi10239Open in IMG/M
3300015371|Ga0132258_13309448All Organisms → cellular organisms → Bacteria1109Open in IMG/M
3300017787|Ga0183260_10010047All Organisms → cellular organisms → Bacteria7342Open in IMG/M
3300018059|Ga0184615_10003510All Organisms → cellular organisms → Bacteria8429Open in IMG/M
3300018077|Ga0184633_10172142All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1122Open in IMG/M
3300018082|Ga0184639_10111522All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1447Open in IMG/M
3300018429|Ga0190272_10274423All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1285Open in IMG/M
3300018432|Ga0190275_10958470All Organisms → cellular organisms → Bacteria925Open in IMG/M
3300018432|Ga0190275_12016365All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300018482|Ga0066669_10624435All Organisms → cellular organisms → Bacteria946Open in IMG/M
3300019377|Ga0190264_11823662All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300020012|Ga0193732_1056424All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium664Open in IMG/M
3300020068|Ga0184649_1402040All Organisms → cellular organisms → Bacteria749Open in IMG/M
3300021363|Ga0193699_10031063All Organisms → cellular organisms → Bacteria2001Open in IMG/M
3300024181|Ga0247693_1021413All Organisms → cellular organisms → Bacteria863Open in IMG/M
3300025159|Ga0209619_10318239All Organisms → cellular organisms → Bacteria824Open in IMG/M
3300025313|Ga0209431_10784361All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300025319|Ga0209520_10760869All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300025907|Ga0207645_10671175All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300025917|Ga0207660_11150610All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300025918|Ga0207662_10329073All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1022Open in IMG/M
3300025922|Ga0207646_11497652All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300025935|Ga0207709_10455554All Organisms → cellular organisms → Bacteria990Open in IMG/M
3300025942|Ga0207689_10518879All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium999Open in IMG/M
3300025960|Ga0207651_11802194All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300026078|Ga0207702_11761203All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium612Open in IMG/M
3300027831|Ga0209797_10065803All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1602Open in IMG/M
3300027840|Ga0209683_10122840All Organisms → cellular organisms → Bacteria1181Open in IMG/M
3300027843|Ga0209798_10085473All Organisms → cellular organisms → Bacteria1616Open in IMG/M
3300027880|Ga0209481_10498879All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300027909|Ga0209382_10043455All Organisms → cellular organisms → Bacteria5380Open in IMG/M
3300028381|Ga0268264_10702858All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1004Open in IMG/M
3300028705|Ga0307276_10132567All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300028803|Ga0307281_10012678All Organisms → cellular organisms → Bacteria2355Open in IMG/M
3300028807|Ga0307305_10048348All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1960Open in IMG/M
3300028828|Ga0307312_10197443All Organisms → cellular organisms → Bacteria1291Open in IMG/M
3300031226|Ga0307497_10626438All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300031421|Ga0308194_10182722All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300031720|Ga0307469_12436686All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300031918|Ga0311367_10560703All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1169Open in IMG/M
3300031965|Ga0326597_10030006All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria6931Open in IMG/M
3300031965|Ga0326597_11580170All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300032126|Ga0307415_101884466All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300032397|Ga0315287_12187330All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300033408|Ga0316605_11540351All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300033482|Ga0316627_100300339All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1318Open in IMG/M
3300033521|Ga0316616_100008919All Organisms → cellular organisms → Bacteria5689Open in IMG/M
3300033521|Ga0316616_100046297All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium3340Open in IMG/M
3300033557|Ga0316617_100856429All Organisms → cellular organisms → Bacteria876Open in IMG/M
3300034123|Ga0370479_0034855All Organisms → cellular organisms → Bacteria1223Open in IMG/M
3300034169|Ga0370480_0095759All Organisms → cellular organisms → Bacteria1024Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil13.59%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere8.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil5.83%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment4.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.85%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil4.85%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.88%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.88%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand2.91%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.91%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost2.91%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.94%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.94%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.94%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.94%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.94%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.94%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland0.97%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.97%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.97%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.97%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.97%
Hot Spring SedimentEnvironmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment0.97%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.97%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.97%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.97%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.97%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.97%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.97%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.97%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.97%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.97%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.97%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.97%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.97%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.97%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.97%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.97%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908032Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_allEnvironmentalOpen in IMG/M
2199352025Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOILEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001664Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembledEnvironmentalOpen in IMG/M
3300003319Sugarcane bulk soil Sample L2EnvironmentalOpen in IMG/M
3300003993Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004778Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3FreshEnvironmentalOpen in IMG/M
3300004782Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2FreshEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006865Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaGEnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009131Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012092Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ445A (23.06)EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012681Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)EnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015158Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G1A, Ice margin)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300017787Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)EnvironmentalOpen in IMG/M
3300018059Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coexEnvironmentalOpen in IMG/M
3300018077Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1EnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300020012Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1EnvironmentalOpen in IMG/M
3300020068Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021363Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2EnvironmentalOpen in IMG/M
3300024181Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34EnvironmentalOpen in IMG/M
3300025159Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3EnvironmentalOpen in IMG/M
3300025313Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)EnvironmentalOpen in IMG/M
3300025319Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1EnvironmentalOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027831Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027840Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027843Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028705Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115EnvironmentalOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031918III_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300032397Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0EnvironmentalOpen in IMG/M
3300033408Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCTEnvironmentalOpen in IMG/M
3300033482Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_CEnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M
3300034123Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_01D_15EnvironmentalOpen in IMG/M
3300034169Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_15EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Perma_A_C_033756302124908032SoilMAHESYGFMERELAFKLLASHALVDEEFFFALRKDPESAAAELHIRLTDEDINYIKNHVEWDKLEDRAVTFRDALHLELVTNSW
deepsgr_011383002199352025SoilDLPYGYMEREIKFKLLAAHAMVDRKFFDRLRKDPEGAAAELHVHLTDNDLIYLRELVDWDRIEKVADDIRASLSLEMVTNSW
JGI10216J12902_10308487123300000956SoilVTMDQSEEPQYPNETNPELEEYGFMERELAFKLIASHAMVDPQYFDYLRENPVAAAAHLHIALEESDIAYLQNDVDWETLASLAE
JGI10216J12902_11578387823300000956SoilVTMDQYENNEPEYPNETNPEHERYGFMERELAFKLLASHAMVDPGFFEYLRKDPVAAAAHLHVALEPKDIEYLTNDVDWDRLSEMAEPVRASLKLELVTNSW*
JGI10216J12902_12332089213300000956SoilMDNKHDPREDMYDYGFMERELAFKLLASHALVDAEYFEWLRTDPEAAAAQLHIRLTANDLEYLRDVVEWDGIQAVADGVRERLHLDQVTNSW*
P5cmW16_107658923300001664PermafrostMDETQDGSYEEHEPYGFMERELIFKLLASHALVDADFFDWLREDPESAAAELHIRLTDEDLDYLKNVVEWDRITEIAKPCLLYTSDAADER
soilL2_1012706933300003319Sugarcane Root And Bulk SoilMKDGTGEHEPYGFMERELAFKLLASHALVDREFFYWLKDDPENAAAHLHIRLTESDLDYLRKEVQWDEIERVADPIRESLRLEKVTNSW*
Ga0055468_1013069813300003993Natural And Restored WetlandsDPREDYLPYGFMERELAFKLLAAHALVDAEFFDWLRSDPENAAAQLHIRLTNADIEYLSKVVEWDAISASAPDIRERLHLDMVTNSW*
Ga0062593_10064956223300004114SoilMSEDQWFGKREHREPYGFTEREIAFKLMATHAMVDAEYFERLRNDPVGAAAELHIALTDRDIEYLLNEVEWDRIAENADPIRESLHLEIVTNSW*
Ga0063356_10033914223300004463Arabidopsis Thaliana RhizosphereMSHEPYGFMERELAFKLLASHALVDRDFFEYLRRDPEAAAAELHIRLTERDLEYLRNDVEWDVLAQTNSRGLRSDDTIRDALHLDRVTNSW*
Ga0062595_10053300523300004479SoilMSEDQWFGQHEHREPYGFTEREIAFKLLASHAMVDAEFFSWLRSDPVAAAAQLHIALTERDVEYLKNEVDWDRIAENADPIRESLHLDIVTNSW*
Ga0062595_10058986123300004479SoilMNEDQWFGKREHREPYGFTEREIAFKLLASHAMVDAEFFEKLRNDPVGAAADLHIALTERDVQYLRTEVEWDRIAENAEPIRESLHLEIVTNSW*
Ga0062595_10082069313300004479SoilMDNYEVPPHIDLPYGYMEREIKFKLLAAHAMVDREFFEHLRDDPDGAAAELHIRLSDNDLIYLRELVDWDRIAKVADDIRESLNLEMVTN
Ga0062383_1035092213300004778Wetland SedimentEHERYGFMERELAFKLLASHAMVDGDFFEYLRRDPVAAAAHLHVALEPKDVEYLTNEVDWDRLAEMAEPVRASLKLELVTNSW*
Ga0062382_1016629323300004782Wetland SedimentVTTDPYANNGEPQYPNETNPEHERYGFMERELAFKLLASHAMVDGDFFEYLRRDPVAAAAHLHVALEPKDIEYLTNEVDWDRLAEMAEPVRASLKLELVTNSW*
Ga0062594_10050471723300005093SoilMDNKHDPREDTMPYGFMERELAFKLLASHALVDPDFYEWLKSDPENAANQLHIRLTNDDITYLSKTVEWDAIDKVAEDIRARLHLDLVTNSW*
Ga0062594_10075599923300005093SoilMSEDQWFGKREHREPYGFTEREIAFKLLASHAMVDAEFFEKLRNDPVGAAADLHIALTERDVQYLRTEVEWDRIAENAEPIRESLHLEIVTNSW*
Ga0066684_1026108723300005179SoilMARQNVPPHDERPYGFMERELAFKLMAAHALVDHEYFEHLRRDPETAAAELHIRLTAEDLDYLRNQVDWEHLAGNAPHIRRSLKLEMVTNSW*
Ga0070687_10054312323300005343Switchgrass RhizosphereMDNYEVPPHIDLPYGYMEREIKFKLLAAHAMVDREFFEHLRDDPDGAAAELHIRLSDNDLIYLRELVDWDRIAKVADDIRESLNLEMVTNSW*
Ga0070705_10006505223300005440Corn, Switchgrass And Miscanthus RhizosphereMDNKHDPREDTMPYGFMERELAFKLLASHALVDPDFYEWLKSDPENAANQLHIRLTNDDITYLSKTVEWDSIDKVAEDIRARLHLDLVTNSW*
Ga0070708_10001415333300005445Corn, Switchgrass And Miscanthus RhizosphereMDVDQVPGEEPYGFMERELIFKLLASHALVDAEYFEWLRKDPESAAAELHIRLTDEDLDYLRNVVEWDRIASVAPSIRESLNLKMVTHSW*
Ga0070708_10009609043300005445Corn, Switchgrass And Miscanthus RhizosphereMDNYEVPPHIDLPYGYMEREVAFKLLAAHAMVDPEFHAWLRKDPEGAAAHLHIRLTENDLIYLREIVDWDRIDKVADDIRESLRLEMVTNSW*
Ga0070706_10104501123300005467Corn, Switchgrass And Miscanthus RhizosphereRDEPYGFMERELVYKLLASHAMVDSAFHARLRDDPEGAAAELHIQLTKNDLIYLREIVDWDRIDKVADDIRESLRLEMVTNSW*
Ga0070707_10048446233300005468Corn, Switchgrass And Miscanthus RhizosphereMDNYEVPPHIDLPYGYMEREVAFKLLAAHAMVDPEFHAWLRKDPEGAAAHLHIRLTENDLTYLREIVDWDRIDKVADDIRESLRLEMVTNSW*
Ga0070707_10085321123300005468Corn, Switchgrass And Miscanthus RhizosphereMDNYEVPPHIDLPYGYMEREVAFKLLAAHAMVDPEFHAWLRKDPEGAAAHLHIRLTENDLIYLREMVDWDRIDKVADDI
Ga0070699_10016926723300005518Corn, Switchgrass And Miscanthus RhizosphereMSEDQWFGKHEHREPYGFTEREIAFKLLASHALVDAEFFERLRNDPVGAAAELHIALTERDVEYLRTEVEWDRISENADPIRESLHLDIVTNSW*
Ga0070684_10080540413300005535Corn RhizospherePHIDLPYGYMEREIKFKLLAAHAMVDREFFEHLRDDPDGAAAELHIRLSDNDLIYLRELVDWDRIAKVADDIRESLNLEMVTNSW*
Ga0070696_10042453323300005546Corn, Switchgrass And Miscanthus RhizosphereMDNYEVPPHIDLPYGYMEREVAFKLLAAHAMVDPEFHAWLRKDPEGAAAHLHIRLTENDLIYLREMVDWDRIDKVADDIRESLRLEMVTNSW*
Ga0066700_1093721613300005559SoilYGFMERELAFKLMAAHALVDHEYFEHLRRDPETAAAELHIRLTAEDLDYLRNQVDWEHLAGNAPHIRRALSLEMVTNSW*
Ga0068856_10086873513300005614Corn RhizosphereQWFGKREHREPYGFTEREIAFKLLASHAMVDAEFFEKLRNDPVGAAADLHIALTERDVQYLRTEVEWDRIAENAEPIRESLHLEIVTNSW*
Ga0066905_10124517623300005713Tropical Forest SoilMSTDQWFGKKEHREPYGFTEREIAFKLMASHAMVDAEYFDRLRRDPVGAAAELHIALTDRDVEYLLNEVEWDRIAENADPIRAALKLEIVTNSW*
Ga0075417_1011528723300006049Populus RhizosphereMKDDNGNTGEHEPYGFMERELAFKLLASHALVDHEFFNWLRDDPENAAAHLHIRLTDADLEYLRKEVAWDEIAKVAEPVRRSLKLEMVTNSW*
Ga0079220_1023080233300006806Agricultural SoilMGEDRWFGKKEHREPYGFTEREMAFKLLASHALVDAEYFEWLRKDPVAAAAELHVALTERDVEYLRNEVEWDRIAENAFPIRESLHLD
Ga0073934_1016482733300006865Hot Spring SedimentMDDMHDPREDREPYGFMERELAFKLLASHALVDAEFFEWLRSDPENAAAQLHIRLTDRDVEYLTKTVEWDAIATVADDIRARLHLDQVTNSW*
Ga0075419_1025812923300006969Populus RhizosphereMTVGNGNSGEHEPYGFMERELAFKLLASHALVDHEFFNWLRDDPENAAAHLHIRLTDADLEYLRKEVAWDEIAKVAEPVRRSLKLEMVTNSW*
Ga0079218_1298067223300007004Agricultural SoilMDEKHDPREDYLPYGFMERELAFKLLAAHALVDAEFFDWLRSDPENAAAQLHIRLTNADIEYLSKVVEWESIATDAPAIRDRLHLDQVTNSW*
Ga0115027_1003744933300009131WetlandMAVQEHEPYGFMERELVFKLLASHALVDEEFFHWLRDDPENAAAHLHIRLTDADIDYLRNSVEWDRIEERAGSIRESLHLDLVTNSW*
Ga0126312_1126947123300010041Serpentine SoilQQTDEEQIPPHPDEPYGFMEREVAFKLLASHAMVDKEYFFWLRKDPRAAAAQLHIALTEKDLDYLQNIVEWNRINEQADMIRESLHLDQVTNSW*
Ga0134125_1167173813300010371Terrestrial SoilMSEDQWFGRREHREPYGFSEREVAFKLLASHALVDAEFFSWLRTDPVAAAAQLHIALTERDVEYLKNEVEWERIAENADPIRESLHLDIVTNSW
Ga0134127_1004859753300010399Terrestrial SoilMSEDQWFGRREHREPYGFSEREVAFKLLASHALVDAEFFSWLRTDPVAAAAQLHIALTERDVEYLKNEVEWDRIAENADPIRESLHLDIVTNSW*
Ga0134121_1134622513300010401Terrestrial SoilQWFGKREQREHYGFPEREIAFKLLESHAMVDAEFFEKLRNDPVGAAADLHIALTERDVQYLRTEVEWDRIAENAEPIRESLHLEIVTNSW*
Ga0134123_1018863913300010403Terrestrial SoilGKHEHREPYGFTEREIAFKLLASHALVDAEFFERLRNDPVGAAAELHIALTERDVEYLRTEVEWDRISENADPIRESLHLDIVTNSW*
Ga0136621_100709673300012092Polar Desert SandMTMQMGDEMSGNVQGGGTEPDGTEHEPYGFMERELIFKLLASHAMVDRDFYFWLRKDPRGAAAELHIALTDEDVDYIQNQVEWDRLDEIADPVRAALHLELVTNSW*
Ga0150985_11118557013300012212Avena Fatua RhizosphereERRRTGMSTDQWFGKHEHREPYGFTEREIAFKLMAAHAMVDPAYFDRLRKDPVGAAAELHVALTERDVDYLLNEVDWDRIAENADPIRASLKLEVVTNSW*
Ga0137375_1083694223300012360Vadose Zone SoilMRMQSNDGNEHEPYGFMERELAFKLLASHALVDGDYFSWLRDDPEGAAAHLHIRLTDADLEYLRKEVQWDAIAKMAEPIRGSLRLEKVTNSW*
Ga0136613_1072649513300012681Polar Desert SandGNVQGGGTEPEGTEHEPYGFMERELAFKLLASHAMVDRDFYFSLRNDPRGAAAELHIALTDEDVDYIQNQVEWDRLDEIADPVRAALHLELVTNSW*
Ga0153915_1018122133300012931Freshwater WetlandsVRPGNENPYQTHDEPYGFMERELAFKLMASHALVDEAYFRWLREDPVAAADQLHIRLTDEDVKYLKGIVDWDSIEKVAFSVRESLHLDMVTNSW*
Ga0157378_1129807213300013297Miscanthus RhizosphereMSTDPWFGQHEHREPYGFTEREIAFKLMATHAMVDAEYFERLRKDPVGAAAELHIALTDRDVEYLLNEVEWDRIAENAVPIRESLHLEIVTNSW*
Ga0120158_1025429823300013772PermafrostMERELIFKLLASHALVDADFHGRLRDDPESAAAELHIRLTDKDLDYLKNIVEWDRIEGVADDIRGTLHLDMVTNSW*
Ga0120158_1034098423300013772PermafrostMERELAFKLLASHALVDAEFHAWLREDPASAAAQLHIPLTDKDLEYLRGIVEWDRIDENAKTIRDSLHLDSVVNSSW*
Ga0157380_1249783923300014326Switchgrass RhizosphereMPYGFMERELAFKLLASHALVDPDFYEWLKSDPENAANQLHIRLTNDDITYLSKTVEWDAIDKVAEDIRARLHLDLVTNSW*
Ga0167622_107034213300015158Glacier Forefield SoilMEGSAMDETQDGSFEEHEPYGFMERELIFKLLASHALVDAEFFDWLREDPESAAAELHIRLTDEDLDYLKNVVEWDRITKIAEPIRESLHLDMVTNSW*
Ga0132258_1004337793300015371Arabidopsis RhizosphereMSTDPWFGQHEHREPYGFTEREIAFKLMATHAMVDAEYFERLRKDPVGAAAELHIALTDRDVEYLLNEVEWDRIAENAVPIRESLHLDIVTNSW*
Ga0132258_1330944823300015371Arabidopsis RhizosphereMDNQHAPREDTEPYGFMERELAFKLLASHALVDSEFYEWLKRDPENAAAQLHIRLTDKDIDYIQNTVEWGQIDEMAADIRERLHLDLVTNSW*
Ga0183260_1001004763300017787Polar Desert SandMTMQMGDEMSGNVQGGGTEPEGTEHEPYGFMERELAFKLLASHAMVDRDFYFSLRNDPRGAAAELHIALTDEDVDYIQNEVNWDRLDEIADPVRESLQLKLITNSW
Ga0184615_1000351023300018059Groundwater SedimentMMDNKHDPREDTEPYGFMERELAFKLLASHALVDAEFYEWLRRDPENAAGQLHIRLTDKDIDYIQNVVEWESIDHMAPDIRERLHLDLVTNSW
Ga0184633_1017214213300018077Groundwater SedimentMDNERPEHEPYGFMERELSFKLLASHALVDKEFFDWLRDDPENAAAHLHIRLTDADIDYIKNTVEWERIEETADPIRESLHLDLVTNSW
Ga0184639_1011152233300018082Groundwater SedimentMDNEKPEHEPYGFMERELAFKLLASHALVDKEFFDWLRDDPENAAAHLHIRLTDADIDYIKNTVEWERIEETADPIRESLHLDLVT
Ga0190272_1027442323300018429SoilMDEKHDPREDYLPYGFMERELAFKLLAAHALVDAEFFDWLRSDPENAAAQLHIRLTNADIEYLSKVVEWDSIGTDAPAIRERLHLDQVTNSW
Ga0190275_1095847023300018432SoilMDEKHDPREDYLPYGFMERELAFKLLAAHALVDAEFFDWLRTDPENAAAQLHIRLTNADIEYLSKVVEWDSIGTDAPAIRDRLHLDQVTNSW
Ga0190275_1201636523300018432SoilVTTDQSGNEEPIQYPNPTNPEHERYGFMEREVAFKLLASHGMVDPDFFEYLRNDPVAAAAHLHIALEPKDIEYLTNEVDWERLAEMAEPVRASLKLELVTNSW
Ga0066669_1062443523300018482Grasslands SoilMARQNVPPHDERPYGFMERELAFKLMAAHALVDHEYFEHLRRDPETAAAELHIRLTAEDLDYLRNQVDWEHLAGNAPHIRRSLKLEMVTNSW
Ga0190264_1182366213300019377SoilMTMDQYPNETNREPEEYGFMERELAFKLLASHAMVDAGFFEYLRNDPVAAAAHLHIALEPNDIEYLTNEVDWDRLTEMAEPVRESLKLELVTHSW
Ga0193732_105642413300020012SoilMMDKDYTEEGGSEPNTTEHEPYGFMERELIFKLLASHALVDRDFYFWLRKDPRGAAEELHIALTDEDVDYIQNEVEWDRIDAVADSIRESLRLELVTNSW
Ga0184649_140204023300020068Groundwater SedimentMDNKHDPREDTEPYGFMERELAFKLLASHALVDAEFYEWLRRDPENAAGQLHIRLTDKDIDYIQNVVEWESIDHMAPDIRERLHLDLVTNSW
Ga0193699_1003106343300021363SoilMDQNQDAADQEHEPYGFMERELIFKLLASHALVDADFYDWLREDPESAAAELHIRLTDEDLEYLKNVVEWDRITELSKPIRDSLHLDMVTNSW
Ga0247693_102141333300024181SoilIDLPYGYMEREIKFKLLAAHAMVDREFFEHLRDDPDGAAAELHIRLSDNDLIYLRELVDWDRIAKVADDIRESLNLEMVTNSW
Ga0209619_1031823913300025159SoilMEHEPYGFMERELAFKLLASHALVDSEFFSWLRDDPENAAAHLHIRLTDSDIDYLKNQVEWGRIEEIADPIRESLHLDLVTNSW
Ga0209431_1078436123300025313SoilMDNKHDPREDYLPYGFMERELAFKLLAAHALVDAEFYDRLRTDPENAAAQLHIRLTDKDIDYIQNVVEWDALGLRADDIRERLHLDMVTNSW
Ga0209520_1076086913300025319SoilMEHEPYGFMERELAFKLLASHALVDSEFFSWLRDDPENAAAHLHIRLTDSDIDYLKNQVEWGRIEEIADPIRESLHLDLVTN
Ga0207645_1067117523300025907Miscanthus RhizosphereMNEDQWFGKREHREPYGFTEREIAFKLLASHAMVDAEFFEKLRNDPVGAAADLHIALTERDVQYLRTEVEWDRIAENAEPIRESLHLEIVTNSW
Ga0207660_1115061023300025917Corn RhizosphereMSEDQWFGKHEHREPYGFTEREIAFKLLASHALVDAEFFERLRNDPVGAAAELHIALTERDVEYLRTEVEWDRISENADPIRESLHLDIVTNSW
Ga0207662_1032907323300025918Switchgrass RhizosphereMSEDQWFGKREHREPYGFTEREIAFKLLASHAMVDAEFFEKLRNDPVGAAADLHIALTERDVQYLRTEVEWDRIAENAEPIRESLHLEIVTNSW
Ga0207646_1149765223300025922Corn, Switchgrass And Miscanthus RhizosphereMDNYEVPPHIDLPYGYMEREVAFKLLAAHAMVDPEFHAWLRKDPEGAAAHLHIRLTENDLIYLREMVDWDRIDKVADDIRESLRLEMVTNSW
Ga0207709_1045555423300025935Miscanthus RhizosphereMDNKHDPREDTMPYGFMERELAFKLLASHALVDPDFYEWLKSDPENAANQLHIRLTNDDITYLSETVEWDAIDKVAEDVRARLHLDLVTNSW
Ga0207689_1051887923300025942Miscanthus RhizosphereMSEDQWFGKREHREPYGFTEREIAFKLLASHAMVDAEFFEKLRNDPVGAAADLHIALTERDVQYLRTEVEWDRIAENAEPIRESLHLEIVT
Ga0207651_1180219423300025960Switchgrass RhizosphereMSEDQWFGKREHREPYGFTEREIAFKLLASHAMVDAEFFEKLRNDPVGAAADLHIALTERDVQYLRTEVEWDRIAENA
Ga0207702_1176120323300026078Corn RhizosphereQWFGKREHREPYGFTEREIAFKLLASHAMVDAEFFEKLRNDPVGAAADLHIALTERDVQYLRTEVEWDRIAENAEPIRESLHLEIVTNSW
Ga0209797_1006580333300027831Wetland SedimentVTMDQYGSYEEPVYPNETNPEHERYGFMERELAFKLLASHAMVDGDFFEYLRRDPVAAAAHLHVALEPKDVEYLTNEVDWDRLAEMAEPVRASLKLELVTNSW
Ga0209683_1012284023300027840Wetland SedimentVTTDPYANNGEPQYPNETNPEHERYGFMERELAFKLLASHAMVDGDFFEYLRRDPVAAAAHLHVALEPKDIEYLTNEVDWDRLAEMAEPVRASLKLELVTNSW
Ga0209798_1008547323300027843Wetland SedimentMDQYGNNEEPVYPNETNPEHERYGFMERELAFKLLASHAMVDGDFFEYLRRDPVAAAAHLHVALEPKDVEYLTNEVDWDRLAEMAEPVRASLKLELVTNSW
Ga0209481_1049887913300027880Populus RhizosphereGFMERELAFKLLASHALVDHEFFNWLRDDPENAAAHLHIRLTDADLEYLRKEVAWDEIAKVAEPVRRSLKLEMVTNSW
Ga0209382_1004345593300027909Populus RhizosphereMKDDNGNTGEHEPYGFMERELAFKLLASHALVDHEFFNWLRDDPENAAAHLHIRLTDADLEYLRKEVAWDEIAKVAEPVRRSLKLEMVTNSW
Ga0268264_1070285823300028381Switchgrass RhizosphereMDNYEVPPHIDLPYGYMEREIKFKLLAAHAMVDREFFEHLRDDPDGAAAELHIRLSDNDLIYLRELVDWDRIAKVADDIRESLNLEMVTNSW
Ga0307276_1013256713300028705SoilMDDSTNSWVDQDQADDDPIPPHPDKPYGFMEREVAFKLLASHAMVDKEFFFRLREDPAGAAKDLHIALTEKDLNYLQNVVEWDRVNEHAETIRDALHLEEVT
Ga0307281_1001267823300028803SoilMDNKHDPREDTQPYGFMERELAFKLLASHALVDAEFFGWLRSDPERAAAQLHIQLTEQDIYYLQSVVEWESIASVADDIRERLHLDLVTNSW
Ga0307305_1004834833300028807SoilMTVDQDQYPNETNPEHERYGFMEREVAFKLLASHAMVDPDYFEYLRKDPVAAAAHLHIALEPKDIEYLTNEVDWDRLADMADPVRASLKLEIVTNSW
Ga0307312_1019744323300028828SoilMDQNQDAADQEHEPYGFMERELIFKLLASHALVDAEFYDWLREDPESAAAELHIRLTDEDIEYLRNVVEWDRITDLAKPIRDSLHLDMVTNSW
Ga0307497_1062643813300031226SoilMDPEKGSPEQDEHEPYGFMERELVFKLLASHALVDRDFFYELQNDPEAAAAGLHIRLTDKDIDYIANKVEWSVLSASADEIREALHLDLVTNSW
Ga0308194_1018272213300031421SoilDAADQEHEAYGFMERELIFKLLASHALVDAEFYDWLREDPESAAAELHIRLTDEDIEYLRNVVEWDRITDLAKPVRDSLHLDMVTNSW
Ga0307469_1243668623300031720Hardwood Forest SoilMTMDQDQYPNENNPEHELYGFVERELAFKLIAAHAMVDPGYFEYLRKDPVAAAAHLHIALEPKDIDYLTNKVDWDRLADVAEPVRKSLKLEVVTNSW
Ga0311367_1056070323300031918FenMENETREHEPYGFMEREVAFKLLASHALVDEEFYFLLRDDPEVAAEQLHIRLTDADIDYIKNVVEWDRIEETAGSIRESLHLPLVTHSW
Ga0326597_1003000673300031965SoilMDNKHDPREDYLPYGFMERELAFKLLAAHALVDAEFYAWLRSDPENAAAQLHIRLTDQDIDYIQNVVEWDSIDLSAADIRERLHLDMVTNSW
Ga0326597_1158017023300031965SoilMDNKHDPREDYLPYGFMERELAFKLLAAHALVDAEFYARLRSDPENAAAQLHIRLTDQDIDYIQNVVEWDSIDLSAEDIRERLHLDMVTNSW
Ga0307415_10188446613300032126RhizosphereMDEKHDPREDYLPYGFMERELAFKLLAAHALVDAEFFDWLRSDPENAAAQLHIRLTNADIEYLSKVVEWESIATDAPAIRDRLHLDQVTNSC
Ga0315287_1218733023300032397SedimentMMEDTRMEDEKMGHESKEHEPYGFMEREVAFKLLASHALVDKDFFYRLRDDPENAAGQLHIRLTDADIDYLRNVVEWERIEGSADSIRDWLHLDLVTSSW
Ga0316605_1154035113300033408SoilMAVQEHEPYGFMERELIFKLLASHALVDEEFFYWLRDDPENAAAHLHIRLTDADIDYLRNSVEWARIEETAGSIRESLHLDLVTNSW
Ga0316627_10030033923300033482SoilMADQEHEPYGFMERELVFKLLASHALVDEEFFYWLRDDPENAAAHLHIRLTDADIDYLRNSVEWARIEETAGSIRESLHLDLVTNSW
Ga0316616_10000891943300033521SoilMAVQEHEPYGFMERELVFKLLASHALVDEEFFHWLRDDPENAAAHLHIRLTDADIDYLRNSVEWDRIEERAGSIRESLHLDLVTNSW
Ga0316616_10004629743300033521SoilMADQEHEPYGFMERELIFKLLASHALVDEEFFYWLRDDPENAAAHLHIRLTDADIDYLRNSVEWARIEETAGSIRESLHLDLVTNSW
Ga0316617_10085642923300033557SoilMAPQEHEPYGFMERELIFKLLASHALVDEEFFQWLRDDPENAAAHLHIRLTDADIDYLRNSVEWARIEETAGSIRESLHLDLVTNSW
Ga0370479_0034855_206_5053300034123Untreated Peat SoilVAYDDDPTQDEEPIPQHQEPYGFMERELIFKLLASHAMVDAEFFDELRRNPEAAAAQLHIRLTDRDIRYLNNDVDWELIARHADDIRVALSLELVTNSW
Ga0370480_0095759_491_7753300034169Untreated Peat SoilVSYQNVPDEPKPHEPYGFMERELTFKLLASHAMVDAEFFEELRRDPEAAAAQLHIRLTDRDLDYLNHEVDWAVISRHADEIRDALKLELVTNSW

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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