NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F098857

Metagenome Family F098857

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F098857
Family Type Metagenome
Number of Sequences 103
Average Sequence Length 82 residues
Representative Sequence MRHFAVLLAVLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPQGERVRPITVRVGGRTHRYIFGNAAAVVGPSA
Number of Associated Samples 81
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 47.06 %
% of genes near scaffold ends (potentially truncated) 96.12 %
% of genes from short scaffolds (< 2000 bps) 97.09 %
Associated GOLD sequencing projects 77
AlphaFold2 3D model prediction Yes
3D model pTM-score0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (91.262 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(19.417 % of family members)
Environment Ontology (ENVO) Unclassified
(30.097 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(50.485 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 13.51%    β-sheet: 17.12%    Coil/Unstructured: 69.37%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.29
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF01810LysE 26.21
PF16363GDP_Man_Dehyd 9.71
PF06724DUF1206 2.91
PF12840HTH_20 2.91
PF01370Epimerase 2.91
PF00106adh_short 1.94
PF08240ADH_N 1.94
PF13191AAA_16 0.97
PF12802MarR_2 0.97
PF12680SnoaL_2 0.97
PF13578Methyltransf_24 0.97
PF01243Putative_PNPOx 0.97
PF13396PLDc_N 0.97
PF12770CHAT 0.97
PF08327AHSA1 0.97
PF13386DsbD_2 0.97
PF00563EAL 0.97
PF00248Aldo_ket_red 0.97
PF13950Obsolete Pfam Family 0.97
PF13673Acetyltransf_10 0.97
PF04545Sigma70_r4 0.97
PF08447PAS_3 0.97
PF00561Abhydrolase_1 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG2200EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)Signal transduction mechanisms [T] 0.97
COG3434c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domainsSignal transduction mechanisms [T] 0.97
COG4943Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domainsSignal transduction mechanisms [T] 0.97
COG5001Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domainSignal transduction mechanisms [T] 0.97

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms91.26 %
UnclassifiedrootN/A8.74 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000033|ICChiseqgaiiDRAFT_c0851094Not Available900Open in IMG/M
3300003373|JGI25407J50210_10124055All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → environmental samples → uncultured Corynebacteriales bacterium636Open in IMG/M
3300004153|Ga0063455_101310700All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani552Open in IMG/M
3300004479|Ga0062595_102178249All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani542Open in IMG/M
3300004480|Ga0062592_102148882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani555Open in IMG/M
3300004778|Ga0062383_10481725All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani619Open in IMG/M
3300005093|Ga0062594_100381499All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1127Open in IMG/M
3300005093|Ga0062594_101257811All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani739Open in IMG/M
3300005093|Ga0062594_101926628All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300005328|Ga0070676_10820152All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300005343|Ga0070687_101506555All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia506Open in IMG/M
3300005356|Ga0070674_102061646All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300005549|Ga0070704_102130523All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani521Open in IMG/M
3300005562|Ga0058697_10622311All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani566Open in IMG/M
3300005564|Ga0070664_100359449All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae1326Open in IMG/M
3300005615|Ga0070702_101459570All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani561Open in IMG/M
3300005718|Ga0068866_11151626Not Available558Open in IMG/M
3300005841|Ga0068863_102627079All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani512Open in IMG/M
3300006058|Ga0075432_10579506All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani511Open in IMG/M
3300006844|Ga0075428_101517870All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria702Open in IMG/M
3300006847|Ga0075431_100602922All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium1082Open in IMG/M
3300006853|Ga0075420_100802340All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani811Open in IMG/M
3300006871|Ga0075434_102631081All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani503Open in IMG/M
3300006881|Ga0068865_101851036All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082546Open in IMG/M
3300006918|Ga0079216_10339306All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium911Open in IMG/M
3300006918|Ga0079216_10866014All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani675Open in IMG/M
3300009100|Ga0075418_10304459Not Available1699Open in IMG/M
3300009100|Ga0075418_11998658All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium631Open in IMG/M
3300009147|Ga0114129_11539311All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria816Open in IMG/M
3300009147|Ga0114129_11781235All Organisms → cellular organisms → Bacteria749Open in IMG/M
3300009147|Ga0114129_12039906All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300009148|Ga0105243_11695556All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani661Open in IMG/M
3300009156|Ga0111538_10452812All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces → Agromyces flavus1627Open in IMG/M
3300009156|Ga0111538_13228024All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani568Open in IMG/M
3300009162|Ga0075423_10700532All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1069Open in IMG/M
3300009789|Ga0126307_11078956All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani649Open in IMG/M
3300009840|Ga0126313_10644519All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani855Open in IMG/M
3300010037|Ga0126304_10078685All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2053Open in IMG/M
3300010037|Ga0126304_10927656All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani592Open in IMG/M
3300010038|Ga0126315_10595044Not Available714Open in IMG/M
3300010040|Ga0126308_10832651All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani640Open in IMG/M
3300010044|Ga0126310_10110851All Organisms → cellular organisms → Bacteria1682Open in IMG/M
3300010045|Ga0126311_10479129All Organisms → cellular organisms → Bacteria970Open in IMG/M
3300010045|Ga0126311_11210572All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria625Open in IMG/M
3300010166|Ga0126306_11124333All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani644Open in IMG/M
3300010403|Ga0134123_11993230All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani639Open in IMG/M
3300011119|Ga0105246_11789460All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani587Open in IMG/M
3300012985|Ga0164308_12085312Not Available528Open in IMG/M
3300013306|Ga0163162_12837273Not Available558Open in IMG/M
3300013307|Ga0157372_12151337All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300013308|Ga0157375_13622024All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani514Open in IMG/M
3300014263|Ga0075324_1052907All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani795Open in IMG/M
3300014268|Ga0075309_1058458All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia889Open in IMG/M
3300014302|Ga0075310_1007240All Organisms → cellular organisms → Bacteria1960Open in IMG/M
3300014325|Ga0163163_11710201All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria690Open in IMG/M
3300014745|Ga0157377_10815196All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani689Open in IMG/M
3300015372|Ga0132256_103645051All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium518Open in IMG/M
3300015374|Ga0132255_101970302All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani889Open in IMG/M
3300017965|Ga0190266_10808779All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium602Open in IMG/M
3300018432|Ga0190275_10289454All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani1600Open in IMG/M
3300018432|Ga0190275_10411986All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani1364Open in IMG/M
3300018466|Ga0190268_11926804All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani539Open in IMG/M
3300018469|Ga0190270_10850860All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani924Open in IMG/M
3300018469|Ga0190270_12263056All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia604Open in IMG/M
3300018481|Ga0190271_11238529All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria868Open in IMG/M
3300018920|Ga0190273_10714443All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani779Open in IMG/M
3300018920|Ga0190273_11334657All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani621Open in IMG/M
3300019377|Ga0190264_10089969All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani1402Open in IMG/M
3300025901|Ga0207688_10039931All Organisms → cellular organisms → Bacteria2607Open in IMG/M
3300025907|Ga0207645_10617565All Organisms → cellular organisms → Bacteria736Open in IMG/M
3300025918|Ga0207662_10541053All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani806Open in IMG/M
3300025918|Ga0207662_10953546All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani608Open in IMG/M
3300025932|Ga0207690_10430065All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1058Open in IMG/M
3300025932|Ga0207690_10649801All Organisms → cellular organisms → Bacteria864Open in IMG/M
3300025935|Ga0207709_11418723All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300025945|Ga0207679_11445718All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300025972|Ga0207668_11838814Not Available546Open in IMG/M
3300026035|Ga0207703_11981059All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani559Open in IMG/M
3300028587|Ga0247828_11084767All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani529Open in IMG/M
3300028596|Ga0247821_10794765All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani623Open in IMG/M
3300028597|Ga0247820_11061039All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium580Open in IMG/M
3300028597|Ga0247820_11221533All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani543Open in IMG/M
3300028608|Ga0247819_11081774All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani511Open in IMG/M
3300028771|Ga0307320_10125485All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium985Open in IMG/M
3300028876|Ga0307286_10387415All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani523Open in IMG/M
3300028878|Ga0307278_10328205All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani675Open in IMG/M
3300028881|Ga0307277_10342228All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium666Open in IMG/M
3300028889|Ga0247827_10296265All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium942Open in IMG/M
3300030006|Ga0299907_10698288All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani777Open in IMG/M
3300030006|Ga0299907_11020534All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708606Open in IMG/M
3300030336|Ga0247826_10320229All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani1119Open in IMG/M
3300030336|Ga0247826_11159309All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani619Open in IMG/M
3300031228|Ga0299914_10211731All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1718Open in IMG/M
3300031228|Ga0299914_11579736All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani508Open in IMG/M
3300031547|Ga0310887_10846232All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia577Open in IMG/M
3300031716|Ga0310813_12273735All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300031824|Ga0307413_10646446Not Available872Open in IMG/M
3300031824|Ga0307413_11284973All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani640Open in IMG/M
3300031824|Ga0307413_11906444All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300031995|Ga0307409_102664215All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani528Open in IMG/M
3300032080|Ga0326721_10666818All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria639Open in IMG/M
3300032080|Ga0326721_10843015All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria577Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil19.42%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere12.62%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil9.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil9.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.85%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere3.88%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.88%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands2.91%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.91%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.91%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.91%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil1.94%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.94%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment0.97%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.97%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.97%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.97%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.97%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.97%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere0.97%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.97%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.97%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.97%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.97%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave0.97%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300003373Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1Host-AssociatedOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004778Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3FreshEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005562Agave microbial communities from Guanajuato, Mexico - As.Ma.eHost-AssociatedOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014263Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1EnvironmentalOpen in IMG/M
3300014268Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1EnvironmentalOpen in IMG/M
3300014302Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D2EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028596Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14EnvironmentalOpen in IMG/M
3300028597Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14EnvironmentalOpen in IMG/M
3300028608Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028876Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031228Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032080Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiDRAFT_085109413300000033SoilMRCAALVIAACLLAPATASAQRVEDTFFNSVIPSXVDHLIXFTPTTFAIHPLGQRVVPITVRVGGRTHRYIFGNAAAA
JGI25407J50210_1012405523300003373Tabebuia Heterophylla RhizosphereMYRVAAVLAALLLLPATASAQRVEDTFFNSVIPSRIDHLIGFSTTTFAIHPQGQRVVPITVRVGGRTYRYIFGNAAAVVGPSAKL
Ga0063455_10131070023300004153SoilMRRPGVLLTVVISSLVLLPVSASEARVRYAFFNSSIPTRIDHLIGFTPTTYAIHPPGQRVTPITVRVGGRQYRYVFDNAAAGVGGSATMYLKM
Ga0062595_10217824913300004479SoilMRWPALLVAASLLVPAAASARPQSAFFNSIIPSRVDHLIGFTPTTFAIHPMGQRVVPITVTVGGRRYRYIFDNAAAAVGPSANIYIRNMLRARRYPS
Ga0062592_10214888213300004480SoilMRCAALVIAACLLAPATASAQRVEDTFFNSVIPSRVDHLIGFTPTTFAMYPPGQPIVPIKVRVGGRTYRYIFGNAAAAVGPTANIYMRNIPGAALPEPARNLPRPSAQGR*
Ga0062383_1048172513300004778Wetland SedimentMPRVTLALAVLLLAPAPASAREVEDTFFNSVIPSRVDHLIGFTPTTFAIHPRGERVVPITVRLGGRTYRYIFGNAS
Ga0062594_10038149913300005093SoilMRWPALIVAAVLALPAAASARPQSAFFNSIIPSRVDHLIGFTPTTFAIHPIGQRVVPITVRVGGRRYRFIFDNAAAVVGPSSG
Ga0062594_10125781113300005093SoilMRRPVLIILATSLLLPATASARAQSAFFNSAIPSRIDHLIGFTPTTFAIHPIGQRIVPITVNVGGRRYRYIFDNAAANVGPSVNFWVKNLLRDRRYPSPQ
Ga0062594_10192662813300005093SoilMRHFAVGLAFLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPPGQPLKPIVVKVGGRTHRYIFG
Ga0070676_1082015213300005328Miscanthus RhizosphereMRHFAVLLAVLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPQGERVRPITVRVGGRTHRYIFGNAAAVVGPSA
Ga0070687_10150655513300005343Switchgrass RhizosphereMRHFAVGLAFLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFVIHPPDQPVKPIVVRVGGRTHRYIFG
Ga0070674_10206164623300005356Miscanthus RhizosphereMRCTVLALALCLFAPATASARKAEDTFFNSVIPIRVDHLIGFTPTTFAIHPAGERVKPITVRVGGKTHRYIFG
Ga0070704_10213052313300005549Corn, Switchgrass And Miscanthus RhizosphereMRHFAVGLAFLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFVIHPPDQPVKPIVVRVGGRTHRYIFGSAAAVVGPSAGI
Ga0058697_1062231123300005562AgaveMRRLALAVAVVMLTPATASAQKVEDTFFNSVIPSRVDHLIGFTPTTFAMYPRGKRIVPITVRVGGRTYRYIFGDAAAAVGPSANIYLRNMIRM
Ga0070664_10035944933300005564Corn RhizosphereMRHFAVLLAVLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPQGERVRPITVRVGGRTHRYIFGNA
Ga0070702_10145957013300005615Corn, Switchgrass And Miscanthus RhizosphereMRLATFALAVLLLAPATASARKVEDTFFNSIIPTRVDHLIGFTPTTFAIHPRDQRVVPITVRVGGRTYRYTFGNAAAVVGPSAGIYLRNMIRMRRYPSPQGI
Ga0068866_1115162623300005718Miscanthus RhizosphereMRRLGLALALLLFAPATASARVEDAFFNSHIPIRVDHLIGFAPTTMAIHPPGQRLVPIKVRVGGRTY
Ga0068863_10262707913300005841Switchgrass RhizosphereMRILLGVVAGLLLVPASASAQRVEDAFFNSVIPSRVDHLIGFTPTTFAIHPRDQRLTPIKVRVGGRTHRYVFSNAAAVVGPSADIYLRNMIRGRRYPSPQGIFVD
Ga0075432_1057950613300006058Populus RhizosphereMRWPALIVAACLLLPATATAARPQSAFFNSIIPSRVDHLIGFTPTTFAIHPMGQRIVPITVRVGGRRYRYIFDNAAAAVGPSANIYIRNMLRARRY
Ga0075428_10151787023300006844Populus RhizosphereMRWPALVIAACLLLPATASARAQSAFFNSIIPSRVDHLIGFTPTTFAIHPMGQRIVPITVTVGGRRYRYIFDNAAAAVG
Ga0075431_10060292223300006847Populus RhizosphereMRWVALFIAAFLLAPATASAQRVEDTFFNSVIPSRVDHLIGFTPTTFAIHPLGQRVEPITVRVGGRTHRYTFGNAAAVVGPSANIYMRNMIRARRYPSP
Ga0075420_10080234013300006853Populus RhizosphereMRLVGLLIAAFLLAPATASAQRVEDTFFNSVIPARIDHLIGFTPTTFAIHPLGQRVEPITVRVGGRTHRYTFGNAAAAVGPSANIYMRNMIR
Ga0075434_10263108113300006871Populus RhizosphereMRWPALIVAACLLIPATASARPQSAFFNSVIPSRVDHLIGFTPTTYAIHPIGQRVVPITVRVGGRRYRYIFDNAAAGVGPSAGLILRNMIRNRRYPS
Ga0068865_10185103613300006881Miscanthus RhizosphereMRPLLIVLAVVLMAPATASARPVEDAYFNSFISSRVDHLIGFTPTTFAIHPAGKRVVPIKVRVGGRG
Ga0079216_1033930623300006918Agricultural SoilMRRLLAVFIAAFLLAPATASARGVEDTFFNSIIPSRVDHLIGFTPTTFAMYPPGQRIVPIRVRVGGRTYRYVFGNAAAAVGPSANIYLRNMIRMRRY
Ga0079216_1086601433300006918Agricultural SoilMRRATLALAVLLLAPATASARKVEDTFFNSVIPSRVDHLIGFTPTTFAIHPRGERVVPIT
Ga0075418_1030445953300009100Populus RhizosphereMRRATLALAILLLAPATASARKVEDTFFNSVIPSRVDHLIGFTPTTFAIHPLGKRVVPITVRFGGRTYRYTFGN
Ga0075418_1199865823300009100Populus RhizosphereMRPLALLIALLLLAPATASAQRAEDTFFNSVIPSRVDHLIGFTPTTFAIHPQGQRVVPITVRVGGRTHRYIFGNAAAVVGPSANIYLRNMI
Ga0114129_1153931123300009147Populus RhizosphereMRWVALSIAAFLLAPASASAQRVQDTFFNSVIPSRVDHLIGFTPTTFAIHPIGQRVEPITVRVGGRTYRYTFGNAAAAVGPSANI
Ga0114129_1178123513300009147Populus RhizosphereMRYFAVGLAVLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPVGKPIRPITVRVGGKTHRYIFGNAAAVVGPSPP*
Ga0114129_1203990623300009147Populus RhizosphereMRLVGLLIAAFLLAPATASAQRVEDTFFNSVIPARIDHLIGFTPTTFAIHPLGQRVEPITVRVGGRTHRYTFG
Ga0105243_1169555633300009148Miscanthus RhizosphereMRCAALFIAACLLAPATASAQRVEDTFFNSVIPSRVDHLIGFTPTTFAIHPLGQRVVPITVRVGGRT
Ga0111538_1045281233300009156Populus RhizosphereMRWPALVVAACLLIPATASARPQSAFFNSVIPSRVDHLIGFTPTTYAIHPLGQRVVPITVRVGGRRYRYIFDNAAAVVGPSARLY
Ga0111538_1322802413300009156Populus RhizosphereMRCAALVIAAFLLAPATASARRVEDTFFNSVIPSRVDHLIGFTPTTFAIHPPTQRVEPISVRVGGRNHRYTFGNAAAVVGPSANIYLR
Ga0075423_1070053233300009162Populus RhizosphereMRHFAVLLAVLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFVIHPPDQPVKPIVVRVGGRTHRYI
Ga0126307_1107895623300009789Serpentine SoilMRYFAVTLLACLLAPAAASAGKAEDTFFNSVIPLRVDHLIGFTPTTFAIHPAGKPLEPITVRIGGRTHRYVFGNASAAVGPSAGIYMRNMIEQRRHPSPQGI
Ga0126313_1064451913300009840Serpentine SoilMRWPALAVAALLLVPATASAQRVEDTLFNSIIPSRIDHVIGFTPTTFAIHPAGQRVRPITVRVGGRTYRYVFGNAAAAVGPSAGIYMRNMI
Ga0126304_1007868563300010037Serpentine SoilMRRATLALAVLLLAPAAASARKVEDTFFNSVIPSRVDHLIGFTPTTFAIHPLGERVVPITVQFGGRTYR
Ga0126304_1092765623300010037Serpentine SoilMRWPAVVVAAFLLAPTTASAQQVQDTFFNSLIPSRVDHLIGFTPTTFAMYPRGERVVPITVRVGGRRYRYIFDNAAAAVGPTA
Ga0126315_1059504413300010038Serpentine SoilVRVLPLVLATLLGAPATASAQRVEDTFFNSVIPSRIDHVIGFTPTTFAIHPVGERVVPIKVRVGGRTYRYIFGNASAAVGPSAD
Ga0126308_1083265123300010040Serpentine SoilMRRATLALAVLLLAPAAASARKVQDTFFNSVIPSRVDHLIGFTPTTFAIHPLGERVVPITVQF
Ga0126310_1011085113300010044Serpentine SoilMRWPTLIIVAALLVLPATASAGVEHAFYNSVIPMRIDHLIGFTPTTYAIHPPNQRVVPISVTVAGRRHRFIFDNAAAWVGPS
Ga0126311_1047912913300010045Serpentine SoilMRYFAVTLLACLLAPAAASARKAEDTFFNSVIPLRVDHLIGFTPTTFAIHPAGKPLEPITVRIGGR
Ga0126311_1121057223300010045Serpentine SoilMRWPVLLIAASLLVPTAASARPQSAFFNSVIPSRVDHLIGFTPTTFAIHPQGQRIVPITVRVGGRRYRYIFDNAAAAVGPSA
Ga0126306_1112433323300010166Serpentine SoilMVRIALALALVMLAPAAASAQKAEDTFFNSIIPSRVDHLIGFTPTTFAMYPRGQRIVPITVRVGGRTYRYIFGNAAAAVGPSANIYLRNMIRMRRYPSPQGIFLDR
Ga0134123_1199323023300010403Terrestrial SoilMRHFAVGLAFLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFVIHPPDQPVKPIVVRVGGRTHRYIFGSAAAVVGPSAGIYMRNMIKGRRH
Ga0105246_1178946023300011119Miscanthus RhizosphereMRHFAVLLAVLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPQGERVRPITVRVGGRTHRYIFGNAAAVVGPSAGIFMRNMIKGRRYPS
Ga0164308_1208531223300012985SoilMRILLGVVVALLSVPASASAQRVEDAFFNSVIPIRVDHLIGFTPTTFAIHPRDQQVVPIKVRVGGR
Ga0163162_1283727313300013306Switchgrass RhizosphereMRRLGLALAMLLLAPATASARKVEDASFNSVIPSRVDHLIGFTPTTFAIHPPGQRLVPIKVRFGGRTHRYVFGNASAVVG
Ga0157372_1215133723300013307Corn RhizosphereMRHFAVLLAVLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPQGERVRPITVRVGGRTHRYIFGNAAAVVGPSAG
Ga0157375_1362202423300013308Miscanthus RhizosphereMRHFAVLLAVLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPQGERVRPITVRVGGRTHRYIFGNAAAVVGPSAGIFMRNMIKGRRYP
Ga0075324_105290723300014263Natural And Restored WetlandsMRRPALALFVAAFLLAPATASAQRVEDTFFNSVIPNRVDHLIGFTPTTFAIHPRGQRVVPITVRVGGRKHRYIFGNAAAVVGPTADIYMRNMIRA
Ga0075309_105845813300014268Natural And Restored WetlandsMRRPAVALLVAAFLLAPATASAQRVEDTFFNSVIPSRVDHLIGFTPTTFAIHPRGQRVVPITVRVGG
Ga0075310_100724033300014302Natural And Restored WetlandsMRRPALALFVAAFLLAPATASAQRVEDTFFNSVIPSRVDHLIGFTPTTFAIHPRGQRVVPITVRVGGRKHRYIFGNAAAVVGPTADIYMRNMIRARRFPS
Ga0163163_1171020113300014325Switchgrass RhizosphereMRRPVLIILATSLLLPATASARAQSAFFNSAIPSRIDHLIGFTPTTFAIHPIGQRIVPITVNVGGRRYRYIFDNAAANV
Ga0157377_1081519613300014745Miscanthus RhizosphereMRCTVLAVALCLLAPATASARKAEDTFFNSVIPIRVDHLIGFTPTTFAIHPAGERIEPITVRTGGKTHRYIFGNAAAVVGPSAGIYLRNMIRQRR
Ga0132256_10364505113300015372Arabidopsis RhizosphereMRWPALIVAACLLLPATATAARPQSAFFNSIIPSRVDHLIGCTPTTFAIHPMGQRIVPITVRVGG
Ga0132255_10197030213300015374Arabidopsis RhizosphereMRWPAIVIAAFLVAPATASAQRVEHAFFNSAIPSRVDHLIGFTPTTFAIHPAGQRIVPITVLVGGRRHRFVFDNAAAAVGPS
Ga0190266_1080877923300017965SoilMRWPALVIGVFLLAPATASAQRVQDTFFNSIIPSRVDHLIGFTPTTFAMYPRGERVVPITVRVGGRRYR
Ga0190275_1028945423300018432SoilMRRLALALAVLLLAPATASAQKVEDTFFNSVIPTRVDHLIGFTPTTFAMYPRGERIVPVTVRVGGRTYRYIFGNAAVVVGPSANIYLRNPIRMRRYPS
Ga0190275_1041198613300018432SoilMLRPTLALAMLLIAPVTAEAAKVQDTFYNSVIPSRVDHLIGFAPTSFGIHPRDEPLRPLTVRVRGRTYRYLFSTASAV
Ga0190268_1192680413300018466SoilMRWPALVIAAFLLTPATASAQRVEDTFFNSIIPSRVDHLIGFTPTTFAIHPRGQRVVPITVRVGDRRYRYIFGNAAAAVGPSANIYLRN
Ga0190270_1085086023300018469SoilMRGAILAVAVTLLVPAPASARKAEDTFFNSVIPIRVDHLIGFTPTTFVIHPIGKPVVPITVRVGGRTYRYTFGNAAAAVGPSAGIYMRNMIGERRNPS
Ga0190270_1226305613300018469SoilMRWPALVIAAFLLAPATASAQRVEDTFFNSVIPSRVDHLIGFTPTTFAMYPRGERIVPITVRVGGR
Ga0190271_1123852913300018481SoilMRWPALVIAAFLLAPATASAQRVQDTFFNSIIPSRVDHLIGFTPTTFAMYPRGERIVPI
Ga0190273_1071444323300018920SoilMRRVTLALAVLLLAPATASARKVEDTFFNSIIPSRVDHLIGFTPTTFAIHPRGERVVPI
Ga0190273_1133465713300018920SoilVRSPALIVAALLLAPATASAQRVQDTFFNSVIPSRVDHLIGFTPTTFAMYPRGQRVVPITVRVGGRTYRYIFGNAAAVV
Ga0190264_1008996923300019377SoilMRWPALFIAAFLLAPATASAQRVEDTFFNSVIPSRVDHLIGFAPTTFGIHPSGQRVVPIAVRVGGRRYRYIFGNAQRGWARRPTST
Ga0207688_1003993143300025901Corn, Switchgrass And Miscanthus RhizosphereMRHFAVLLAVLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPQGERVRPITVR
Ga0207645_1061756513300025907Miscanthus RhizosphereMRHFAVLLAVLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPQGERVRPITVRVGGRTHRYIFGNAAAVVGPSAGIFMR
Ga0207662_1054105323300025918Switchgrass RhizosphereMRHFAVGLAFLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFVIHPPDQPVKPIVVRVGGRTHRYIFGNAAAVVGPSAGIYMRN
Ga0207662_1095354613300025918Switchgrass RhizosphereMRILLGVVAGLLLVPASASAQRVEDAFFNSVIPSRVDHLIGFTPTTFAIHPRDQRLTPIKVRVGGRTHRYVFSNAAAVVGPSADIYLRNMI
Ga0207690_1043006513300025932Corn RhizosphereMRWAALVVAACLLIPATASAARPQSAFFNSFIPTRVDHLIGFTPTTFAIHPIGQRVVPITVRVGGRRYRYIFDNAAAGVGP
Ga0207690_1064980123300025932Corn RhizosphereMRHFAVLLAVLLLAPASASAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPQGERVRP
Ga0207709_1141872313300025935Miscanthus RhizosphereMRHFAVLLAVLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPQGERVRPITVRVGGRTHRYIFGNAAAV
Ga0207679_1144571823300025945Corn RhizosphereMRHFAVVLAVLLLAPATATAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPPGQPLKPIVVKVG
Ga0207668_1183881413300025972Switchgrass RhizosphereMRRLGLALALLLFAPATASARVEDAFFNSHIPIRVDHLIGFAPTTMAIHPPGQRLVPIKVRVGGRTYRYVFGNAAAVVGPSG
Ga0207703_1198105913300026035Switchgrass RhizosphereMRHFAVLLAVLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPQGERVRPITVRVGGRTHRYIFGNAAAVVGPSAGIFMRNM
Ga0247828_1108476723300028587SoilMRRATLALAILLLAPATASARKVEDTFFNSVIPSRVDHLIGFTPTTFAIHPLGERVVPITVRFGGRTYRYTFGNAAAAVGPSADIYLRNMIRARRYPS
Ga0247821_1079476513300028596SoilMRLATFALAVLLLAPATASARKVEDTFFNSIIPTRVDHLIGFTPTTFAIHPRDQRVVPITVRVGGRTYRYTFGNAAAVVGPSAGIYLRNMIRMRRY
Ga0247820_1106103923300028597SoilMRWPALIVAACLLLPATATAARPQSAFFNSIIPSRVDHLIGFTPTTFAIHPMGQRIVPITVRVGGRRYRYIFDNAAAAVGPS
Ga0247820_1122153323300028597SoilMPRVTLALAILLLAPATASARKVEDTFFNSVIPSRVDHLIGFTPTTFAIHPLGERVVPITVRFGGRTYRYTFGNAAAAVGPSADIYLRNMIRARRYPSPQGIFLD
Ga0247819_1108177423300028608SoilMRCSVLAVALCLLAPATASARKAEDTFFNSVIPIRVDHLIGFTPTTFAIHPAGERVKPITVRVGGKTHRYIFGNAAAVVG
Ga0307320_1012548513300028771SoilMRWPVLIVAACLLIPATASAARPQSAFFNSIIPSRVDHLIGFTPTTFAIHPAGQRVVPITVRVGGR
Ga0307286_1038741513300028876SoilMRWPALVIAAFLLAPATASAQRVEDTFFNSVIPSRVDHLIGFTPTTFAMYPRGERIVPITVRVGGRRYRYIFGNAA
Ga0307278_1032820523300028878SoilMRCWPALVIAAFLLAPATASAQRVEDTFFNSVIPSRVDHLIGFTPTTFAIHPRGQRVVPITVRVGGRR
Ga0307277_1034222823300028881SoilMRWPVLLVAAWLLLPATASARPQSAFFNSVIPSRVDHLIGFTPTTFAIHPPGQRVVPITVRVGGRRYRYIFDNAAAVVGPSANIYLRNILRARRYPTPE
Ga0247827_1029626523300028889SoilMRWPALIVAACLLLPATATAARPQSAFFNSIIPSRVDHLIGFTPTTFAIHPMGQRIVPITVRVGGRRYRYIFDNAAAAVGPSAN
Ga0247827_1109726523300028889SoilMSTRLMRWPALIVAASLVLPAAASAQRPESTFFNSIIPSRVDHLIGFTPTTFGIHPAGQRVVPIAVQVGGRRYRFIFGNASAVVGPSAGLYLKN
Ga0299907_1069828813300030006SoilMRWLPLFILAFLIAPATASAQRVEDTFFNSVIPSRVDHLIGFTPTTFAIHPRGQRVVPITVRVGGRKHRYTFGNAAAAVGPTAN
Ga0299907_1102053423300030006SoilMRWSVLIVAALLLAPATASAQRVEDTFFNSVIPSRVDHLIGFTPTTFAIHPLDQRLVPIKVRVRGRTYRYVFGNAAAV
Ga0247826_1032022913300030336SoilMRWPALLVAACLLIPGTASAARPQSAFFNSIIPTRVDHLIGFTPTTFAIHPAGQRVVPITVRVGGRRYRYIFDNAAAVVGPSARLYL
Ga0247826_1115930923300030336SoilMLIAVAALVLAAPATASAQRVEDAFFNSVIPSRVDHLIGFATTTFAIHPPDEPLRPITVRVGGKT
Ga0299914_1021173113300031228SoilMRRPALALCVAAFLLAPASASAQRVEDTFFNSVIPSRVDPLIGFTPTTFAIHPRGQRVVPIT
Ga0299914_1157973613300031228SoilVRWPALLIAALVVAPSAASAQRAEDTFFNSVIPSRVDHLIGFTPTTFAIHPRGQRVVPIAVRVDGRSYRYVFGNAAAVVGPTADIYLRNMINQRRFP
Ga0310887_1084623223300031547SoilMRCTVLALALCLFAPATASARKAEDTFFNSVIPIRVDHLIGFTPTTFAIHPAGERIEPITVRTGGKTHRYIFGNA
Ga0310813_1227373513300031716SoilMRHFAVLLAVLLLAPATASAAKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPQGERVRPITVRVGGRTHRYIFGNAAA
Ga0307413_1064644613300031824RhizosphereMRVLPLVLATLLGAPATASAQRVEDTYFNSVIPSRIDHVIGFTPTTFAIHPVGERVVPIKVRVGGRTHRYIFG
Ga0307413_1128497323300031824RhizosphereMRHFAVVLVVCLLAPAAASARKAEDTFFNSVIPMRVDHLIGFIPTTFAIHPAGRRVVPITVRAGGKTHRYIFGNAAAAVGPTAGIYMRNMI
Ga0307413_1190644423300031824RhizosphereMRYFAVTLLACLLAPATASARKAEDTFFNSVIPLRVDHLIGFTPTTFAIHPAGKPLEPITVRIGGRTHRYVFGNASA
Ga0307409_10266421513300031995RhizosphereMRVLPLVLATLLGAPATASAQRVEDTYFNSVIPSRIDHVIGFTPTTFAIHPVGERVVPIKVRVGGRTHRYIFGNASAAVGPSADIYLRN
Ga0326721_1066681813300032080SoilMRWPALIVAASLLLIPATASARPQSAFFNSVIPTRVDHLIGFTPTTFAIHPAGQRVVPISVRVGGRRYRYIFDNAAAV
Ga0326721_1084301513300032080SoilMRRLTLALAVLLLAPATASARKAEDTFFNSVIPSRVDHLIGFTPTTFAIHPRGEPLVPITVRVGGRTYRYIFGSA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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