Metagenome Family F098829

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098829
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	62 residues
Representative Sequence	MAGPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAADLGAQLGAKAGRNAGRPQLHIVRD
Number of Associated Samples	64
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	66.00 %
% of genes near scaffold ends (potentially truncated)	43.69 %
% of genes from short scaffolds (< 2000 bps)	90.29 %
Associated GOLD sequencing projects	56
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (65.049 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (43.689 % of family members)
Environment Ontology (ENVO)	Unclassified (66.019 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.107 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.45% β-sheet: 0.00% Coil/Unstructured: 43.55%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00589	Phage_integrase	4.85
PF09361	Phasin_2	4.85
PF04392	ABC_sub_bind	2.91
PF00313	CSD	1.94
PF04324	Fer2_BFD	1.94
PF02517	Rce1-like	1.94
PF00239	Resolvase	0.97
PF13565	HTH_32	0.97
PF01165	Ribosomal_S21	0.97
PF02566	OsmC	0.97
PF00211	Guanylate_cyc	0.97
PF00005	ABC_tran	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.91
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	1.94
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	1.94
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	0.97
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.97
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.97
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.97
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.97
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.05 %
All Organisms	root	All Organisms	34.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.05 %
cellular organisms	root	All Organisms → cellular organisms	34.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.05 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	34.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.05 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.21 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.05 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24.27 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.05 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	20.39 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.97 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.05 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10.68 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.05 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	9.71 %
Paracoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus	0.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.05 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.94 %
Paracoccus aestuariivivens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus aestuariivivens	0.97 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.97 %
Bradyrhizobium zhanjiangense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium zhanjiangense	0.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.05 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.94 %
Bradyrhizobium sp. 76	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 76	0.97 %
Paracoccus aestuariivivens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus aestuariivivens	0.97 %
Bradyrhizobium zhanjiangense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium zhanjiangense	0.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10007145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4314	Open in IMG/M
3300001867\|JGI12627J18819_10424913	Not Available	542	Open in IMG/M
3300005332\|Ga0066388_102560084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium zhanjiangense	928	Open in IMG/M
3300005434\|Ga0070709_10016288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4242	Open in IMG/M
3300005435\|Ga0070714_101854164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	589	Open in IMG/M
3300005436\|Ga0070713_101024840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	796	Open in IMG/M
3300005764\|Ga0066903_101251120	Not Available	1382	Open in IMG/M
3300005764\|Ga0066903_101567169	Not Available	1247	Open in IMG/M
3300005764\|Ga0066903_104118798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	779	Open in IMG/M
3300006852\|Ga0075433_10146808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2097	Open in IMG/M
3300006854\|Ga0075425_101553853	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300006903\|Ga0075426_10264821	All Organisms → cellular organisms → Bacteria → Proteobacteria	1253	Open in IMG/M
3300006914\|Ga0075436_100498451	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300007076\|Ga0075435_100098168	All Organisms → cellular organisms → Bacteria	2425	Open in IMG/M
3300009162\|Ga0075423_10161771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2350	Open in IMG/M
3300009792\|Ga0126374_11643576	Not Available	532	Open in IMG/M
3300010043\|Ga0126380_12213036	Not Available	508	Open in IMG/M
3300010047\|Ga0126382_12506353	Not Available	503	Open in IMG/M
3300010048\|Ga0126373_10226773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1826	Open in IMG/M
3300010360\|Ga0126372_13159072	Not Available	512	Open in IMG/M
3300010366\|Ga0126379_11239598	Not Available	852	Open in IMG/M
3300010371\|Ga0134125_12576773	Not Available	553	Open in IMG/M
3300010396\|Ga0134126_11657036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	703	Open in IMG/M
3300010400\|Ga0134122_11934216	Not Available	626	Open in IMG/M
3300012971\|Ga0126369_11636250	Not Available	733	Open in IMG/M
3300012971\|Ga0126369_12187520	Not Available	640	Open in IMG/M
3300016270\|Ga0182036_10398144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus aestuariivivens	1072	Open in IMG/M
3300016270\|Ga0182036_10901689	Not Available	725	Open in IMG/M
3300016270\|Ga0182036_11557471	Not Available	556	Open in IMG/M
3300016319\|Ga0182033_11352214	Not Available	641	Open in IMG/M
3300016341\|Ga0182035_10139320	All Organisms → cellular organisms → Bacteria	1845	Open in IMG/M
3300016341\|Ga0182035_11172280	Not Available	685	Open in IMG/M
3300016341\|Ga0182035_11869604	Not Available	544	Open in IMG/M
3300016357\|Ga0182032_10905991	Not Available	750	Open in IMG/M
3300016371\|Ga0182034_10169866	All Organisms → cellular organisms → Bacteria	1659	Open in IMG/M
3300016371\|Ga0182034_10537909	Not Available	979	Open in IMG/M
3300016371\|Ga0182034_11943443	Not Available	519	Open in IMG/M
3300016387\|Ga0182040_10122845	Not Available	1804	Open in IMG/M
3300016387\|Ga0182040_10472356	Not Available	998	Open in IMG/M
3300016404\|Ga0182037_10380034	Not Available	1158	Open in IMG/M
3300016404\|Ga0182037_10557684	Not Available	967	Open in IMG/M
3300016422\|Ga0182039_10760017	All Organisms → cellular organisms → Bacteria → Proteobacteria	858	Open in IMG/M
3300016445\|Ga0182038_10383613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1173	Open in IMG/M
3300016445\|Ga0182038_10771241	Not Available	841	Open in IMG/M
3300021560\|Ga0126371_10710963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1153	Open in IMG/M
3300021560\|Ga0126371_11151572	Not Available	913	Open in IMG/M
3300021560\|Ga0126371_11599847	Not Available	778	Open in IMG/M
3300025898\|Ga0207692_10145809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1351	Open in IMG/M
3300031545\|Ga0318541_10087782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1654	Open in IMG/M
3300031561\|Ga0318528_10317737	Not Available	836	Open in IMG/M
3300031573\|Ga0310915_10765167	Not Available	680	Open in IMG/M
3300031573\|Ga0310915_10939941	Not Available	605	Open in IMG/M
3300031573\|Ga0310915_11205139	Not Available	523	Open in IMG/M
3300031682\|Ga0318560_10260104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	933	Open in IMG/M
3300031718\|Ga0307474_10318344	Not Available	1200	Open in IMG/M
3300031719\|Ga0306917_11301264	Not Available	562	Open in IMG/M
3300031753\|Ga0307477_10509793	Not Available	817	Open in IMG/M
3300031754\|Ga0307475_10165892	Not Available	1759	Open in IMG/M
3300031779\|Ga0318566_10461086	Not Available	624	Open in IMG/M
3300031779\|Ga0318566_10579489	Not Available	547	Open in IMG/M
3300031793\|Ga0318548_10591886	Not Available	540	Open in IMG/M
3300031823\|Ga0307478_11095823	Not Available	664	Open in IMG/M
3300031835\|Ga0318517_10461818	Not Available	573	Open in IMG/M
3300031879\|Ga0306919_10874044	Not Available	690	Open in IMG/M
3300031879\|Ga0306919_11444201	Not Available	519	Open in IMG/M
3300031890\|Ga0306925_10650556	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300031890\|Ga0306925_11720663	Not Available	604	Open in IMG/M
3300031893\|Ga0318536_10135386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1249	Open in IMG/M
3300031893\|Ga0318536_10332301	Not Available	770	Open in IMG/M
3300031910\|Ga0306923_10236342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2090	Open in IMG/M
3300031910\|Ga0306923_10474473	Not Available	1417	Open in IMG/M
3300031910\|Ga0306923_10665705	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300031910\|Ga0306923_10705164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1123	Open in IMG/M
3300031910\|Ga0306923_11821352	Not Available	624	Open in IMG/M
3300031912\|Ga0306921_11963984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	624	Open in IMG/M
3300031912\|Ga0306921_12152631	Not Available	589	Open in IMG/M
3300031942\|Ga0310916_10699781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 76	857	Open in IMG/M
3300031942\|Ga0310916_11253705	Not Available	611	Open in IMG/M
3300031946\|Ga0310910_10880489	Not Available	703	Open in IMG/M
3300031947\|Ga0310909_11089572	Not Available	649	Open in IMG/M
3300031954\|Ga0306926_10350283	Not Available	1825	Open in IMG/M
3300031954\|Ga0306926_11362193	Not Available	825	Open in IMG/M
3300032001\|Ga0306922_10335122	All Organisms → cellular organisms → Bacteria	1623	Open in IMG/M
3300032001\|Ga0306922_10605851	Not Available	1160	Open in IMG/M
3300032001\|Ga0306922_10620958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1144	Open in IMG/M
3300032009\|Ga0318563_10442443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	703	Open in IMG/M
3300032009\|Ga0318563_10764413	Not Available	518	Open in IMG/M
3300032043\|Ga0318556_10677943	Not Available	537	Open in IMG/M
3300032060\|Ga0318505_10478298	Not Available	588	Open in IMG/M
3300032068\|Ga0318553_10491655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	643	Open in IMG/M
3300032076\|Ga0306924_11204176	Not Available	819	Open in IMG/M
3300032076\|Ga0306924_11574200	Not Available	694	Open in IMG/M
3300032091\|Ga0318577_10626135	Not Available	511	Open in IMG/M
3300032094\|Ga0318540_10453734	Not Available	619	Open in IMG/M
3300032174\|Ga0307470_11749587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	525	Open in IMG/M
3300032261\|Ga0306920_100183087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3125	Open in IMG/M
3300032261\|Ga0306920_100801670	Not Available	1382	Open in IMG/M
3300032261\|Ga0306920_100884270	Not Available	1307	Open in IMG/M
3300032261\|Ga0306920_104370819	Not Available	507	Open in IMG/M
3300032261\|Ga0306920_104378789	Not Available	506	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.17%
Host-Associated	Host-Associated	5.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.17%
Plants	Host-Associated → Plants	5.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.47%
Loam	Environmental → Terrestrial → Soil → Loam	9.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	70.87%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	43.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_100071452	3300001867	Forest Soil	MAGPADHWPPTVGAFWFHYWLDFWLQFWAASIAAQRAADLGARLGAKAGRNAGRPQLHIVRD*
JGI12627J18819_104249131	3300001867	Forest Soil	MTDYVITGAFWFHYWLQFWVEFWATSLAATRAAQLGAQLGARAGREAGRPQLRIVRD*
Ga0066388_1025600842	3300005332	Tropical Forest Soil	MAGPADHWPPTVGAFWFNYWLEFWLQFWAASIAAQRAAYLGAQLGAKAGRNAGRPQLHIVRD*
Ga0070709_100162887	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAGPADHWPPTVGAFWFHYWLEFWLQFWATSIAAQRAADLGAQLGAKAGHNAGRPQLHIVRD*
Ga0070714_1018541642	3300005435	Agricultural Soil	MAGPADHWPPTVGAFWFHYWLEFWLQFWATSIAAQRAADLGAQLGAKAGRNA
Ga0070713_1010248402	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAGPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAADLGAQLGAKAGHNAGRPQLHIVRD*
Ga0066903_1012511203	3300005764	Tropical Forest Soil	MAGPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAADLGAQLGAKAGRNAGRPQLHIVRD*
Ga0066903_1015671694	3300005764	Tropical Forest Soil	AEVPMAGPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAADLGAQLGAKAGRNAGRPQLHIVRD*
Ga0066903_1041187983	3300005764	Tropical Forest Soil	GPGDHWPPTVGAFWFHYWLEFWLQFWTASIAAQRAAVLGAQLGATAGRNAGRPQLHIVRD
Ga0075433_101468084	3300006852	Populus Rhizosphere	MAGPADHWPPTVGAFWFHYWLEFWLQFWTASIAAQRAAVLGAQLGAKAGRNAG
Ga0075425_1015538532	3300006854	Populus Rhizosphere	MAGPADHWPPTVGAFWFHYWLEFWRQFWAASIAAQRAADLGTQLGATAGRNAGRPQLHIVRD*
Ga0075426_102648212	3300006903	Populus Rhizosphere	MAGPADHWPSTVGAFWFHYWLEFWLQFWTASIAAQRAAVLGAQLGATAGRNAGRPQLHIVRD*
Ga0075436_1004984511	3300006914	Populus Rhizosphere	VPMAGPADHWPPTVGAFWFHYWLEFWRQFWAASIAAQRAADLGTQLGATAGRNAGRPQLHIVRD*
Ga0075435_1000981682	3300007076	Populus Rhizosphere	MAGPADHWPPTVGAFWFHYWLEFWLQFWTASIAAQRAAVLGAQLGATAGRNAGRPQLHIVRD*
Ga0075423_101617712	3300009162	Populus Rhizosphere	MAGPADHWPPTVGAFWFHYWLEFWRQFWAASIAAQRAADLGTQLGARAGRNAGRPQLHIVRD*
Ga0126374_116435761	3300009792	Tropical Forest Soil	MAGPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAADLGAHLGAKAGRNAGRPQLHIVKD*
Ga0126380_122130362	3300010043	Tropical Forest Soil	MAGPADHWPPTVGAFWFHYWLEFWLQFWTASIAAQRAAALGAQLGAKAGRNAGRPQLHIVGD*
Ga0126382_125063531	3300010047	Tropical Forest Soil	MAGPADHWPPTVGAFWFHYWLEFWLQFWTASIAAQRAAALGAQLGAKAGRKAGRPQLHIVREGEEE*
Ga0126373_102267731	3300010048	Tropical Forest Soil	MAGPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAAYLGAQLGAKAGRNAARPQLHIVRD*
Ga0126372_131590721	3300010360	Tropical Forest Soil	MAGLADHWPSTAGAFWFHYWLEFWLQFWTASIAAQRAAVLGAQLGATARRNAGRPQLHIVRD*
Ga0126379_112395981	3300010366	Tropical Forest Soil	MAGPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAADLGAHLGAKAGRNAGRPQLHIVRD*
Ga0134125_125767732	3300010371	Terrestrial Soil	MAGPADHWPPTVGVFRFHYWLEFWLQFWTASIAAQRAADLGAQLGAKVGRNAGRPQLHIVRD*
Ga0134126_116570362	3300010396	Terrestrial Soil	SIFAEVPMAGPADHWPSTVGAFWFHYWLEFWLQFWAASMAAQLAADLGAQLGAKAGRNAGRPQLHIVRD*
Ga0134122_119342163	3300010400	Terrestrial Soil	MAGPTDHWPSTVGAFWFHYWLEFWLQFWTASIAAQRAADLGAQLGATAGRNAGRPQLHIVRD*
Ga0126369_116362502	3300012971	Tropical Forest Soil	MAGPADHWPPTVGVFWFHYWLEFWLQFWAASIAAQRAAYLGAQLGAKAGRNAGRPQLHIVRD*
Ga0126369_121875201	3300012971	Tropical Forest Soil	MAGPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAAYLGAQLGAKAGRNAGRPRLHIVRD*
Ga0182036_103981441	3300016270	Soil	MAGPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAAYLGAQLGAKAGRATGRPQLHIVRD
Ga0182036_109016892	3300016270	Soil	MADPADHWPPTVGAFWFHYWLEFWLQFSAASIAAQRAAYLGAQLGAKAGRNAAR
Ga0182036_115574711	3300016270	Soil	VGAFWFHYWLEFWLQFWAASIAAQRAANLGAQLGAKAGRNAARPQLHIVRD
Ga0182033_113522141	3300016319	Soil	GPADHWPPTVGAFWFHYWLEFWLQFWAATIAAQRAADLGAQLGAKAGRNAGRPQLHIVRD
Ga0182035_101393202	3300016341	Soil	MSGPADHWPLTVGAFWFHYWLEFWLQFWAASIAAQRAAYLGAQLGAKVGRNAGRPQLHIVRD
Ga0182035_111722801	3300016341	Soil	GPADHWPPTVGAFWFHYWLEFWLQFWAASIALQRAADLGAQLGAKAGRNAGRPQLHIVRD
Ga0182035_118696041	3300016341	Soil	MAGPADHWPPTVGAFWFHYCFEFWLQFWVASIAAQRAALLGAQLGAKAGRNAGRPQLHIVRD
Ga0182032_109059912	3300016357	Soil	MAGPADHWPLTVGAFWFHYWLEFWLQFWAASIAAQRAAYLGAQLGAKAGRNAGRPQLHIVRD
Ga0182034_101698662	3300016371	Soil	MACPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAAYLGAQLGAKAGRNAARPQLHIVRD
Ga0182034_105379091	3300016371	Soil	EVPMAGPADHLPPTVGAFWFHYWLEFWLQYCAASIAAQRAADLGAQLGAKAGRNAGRPQLHIVRD
Ga0182034_119434431	3300016371	Soil	MAALADHGPPTAGAFWFHYWLEFWLQFWAASIAAQRAADLGAQLGVKAGRNFGRPRLRIVRD
Ga0182040_101228456	3300016387	Soil	SIFAEVPMAGLADHWPPTAGAFWFHYWLEFWLQFWAASIAAQRAADLGAQLGAKARNFGRPRLRIVRD
Ga0182040_104723561	3300016387	Soil	MAGPAYHWPPTVGAFWFHYWFEFWLQFGAASIAAQRAAYLGAQLGAKAGRNA
Ga0182037_103800341	3300016404	Soil	MAGLADHWPPTAGAFWFHYWLEFWLQFWAASIAAQRAADLGAQLGAKAGRNAGRPQLHIVRD
Ga0182037_105576841	3300016404	Soil	TFLSIRLKRPVSVSIFAEVPMAGPADHRPPTIGAFWFHYWLEFWLQFWAASIAAQRADLGAQLGAKAGRNAGRPQLHIVRD
Ga0182039_103052732	3300016422	Soil	MAGPADHWPPTVGAFWFHYWLEFWPQFWAASIAAHRAAYLGAQLGAKAGR
Ga0182039_107600173	3300016422	Soil	MAGPADHWPPTVGAFWFHYWLEFWLQFWAATIAAQRAADLGAQLGAKAGRNAGRP
Ga0182038_103836131	3300016445	Soil	MYAEVPIACPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAADLGAQLGAKAGRNAG
Ga0182038_107712412	3300016445	Soil	MSGPADHWPPTVGAFWFHYWLEFWLQFSAASIAAQRAAYLGAQLGAKVGRNAG
Ga0126371_107109631	3300021560	Tropical Forest Soil	MYAEVPMAGPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAADLGAQLGAKAGRNAGRPQLHIVRD
Ga0126371_111515721	3300021560	Tropical Forest Soil	MVGLADHWLSTVGAFWFHYWLEFWLQFWTASIAAQRAALIGAQLGAKAGRNAGRPQLHIVRD
Ga0126371_115998471	3300021560	Tropical Forest Soil	FMEVPMAGPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAAYLGAQLGAKAGRNAARPQLHIVRD
Ga0207692_101458094	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MAGPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAADLGAQLGAKAGHNAGRPQLHIVRD
Ga0318541_100877821	3300031545	Soil	MYAEVPIACPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAADLGAQLGAKAGRNAGRPQLHIVRD
Ga0318528_103177371	3300031561	Soil	TVGAFWFHYWLEFWLQFSAASIAAQRAAYLGAQLGAKVGRNAGRPQLHIVRD
Ga0310915_107651671	3300031573	Soil	MAGPADHWPPTVGAFWFHYWLEFWLQFWAATIAAQRAADLGAQLGAKAGRNAGRPQLHIVRD
Ga0310915_109399411	3300031573	Soil	MAGPADHRPPTIGAFWFHYWLEFWLQFWAASIAAQRADLGAQLGAKAGRNAGRPQLHIVR
Ga0310915_112051391	3300031573	Soil	MAGPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAADLGAQLGAKAGRNAGRPQLHIVRD
Ga0318560_102601042	3300031682	Soil	MAGPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQKRAAYLGAQLGAKAGRNAARPQLHIVRD
Ga0307474_103183442	3300031718	Hardwood Forest Soil	DHWPPTVGAFWFHYWLDFWLQFWAASIAAQRAADLGARLGAKAGRNAGRPQLHIVRD
Ga0306917_110769781	3300031719	Soil	MAGPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAADLGAQLGAKAGR
Ga0306917_113012641	3300031719	Soil	MSGPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAAYLGAQLGAKVGRNAGRPQLHIVRD
Ga0307477_105097931	3300031753	Hardwood Forest Soil	MAGPADHWPPTVGAFWFHYWLEFWLQFWAAIIAAQRAADLGAQLGAKAGRNAGRPQLHIVRD
Ga0307475_101658925	3300031754	Hardwood Forest Soil	ADHWPPTVGAFWFHYWLEFWLQFWATSIAAQRAADLGAQLGAKAGHNAGRPQLHIVRD
Ga0318566_104610861	3300031779	Soil	TMAGPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAADLGAQLGAKAGRIAGRPQLHIVRD
Ga0318566_105794891	3300031779	Soil	MAGPADRWPLTVGAFWFHYWLEFWLQFWAASIAAQRAADLGAQLGAKAGRNAGRPQLHIVRD
Ga0318548_105918862	3300031793	Soil	MAGLADHWPPTAGAFWFHYWLEFWLQFWAASIAAQRAADLGAQLGAKARNFGRPRLRIVR
Ga0307478_110958231	3300031823	Hardwood Forest Soil	MAGPADHWPPTVGAFWFHYWLDFWLQFWAASIAAQRAADLGARLGAKAGRNAGRPQLHIVRD
Ga0318517_104618181	3300031835	Soil	FLSIRLKRPVSVSIFAEVPMAGPADHWPPTVGAFWFHYWLEFWLQFWAASIDAQRAAYLGAKLGAKAGRNAGRPQLHIVRD
Ga0306919_108740442	3300031879	Soil	MAGPADHWPPTVGAFWFHYWLEFWLQFWAASIAGQRAADLGAQLGAKAGRNAGRPQLHIVRD
Ga0306919_114442011	3300031879	Soil	MAGLADHWPPTAGAFWFHYWLEFWLQFWAASIAAQRAADLGAQLGAKARNFGRPRLRIV
Ga0306925_106505561	3300031890	Soil	MAGPADHWPPTVGAFWFHYWLEFWLQFWAASIAAHRAAYLGAQLGAKAGREAGRPQLYIVRNREPT
Ga0306925_117206631	3300031890	Soil	SIYAEVPMAGPADHWPPTVGAFWFHYWLEFWLQLWAASIAAQRAADLGAQRGAKAGRATGRPQLHIVRD
Ga0318536_101353861	3300031893	Soil	MAGPTDHWPPTVGAFWFHYWFEFCLQFWAASIAAQRAAYLGAQLGAKAGRNAGRPQLHIVRD
Ga0318536_103323012	3300031893	Soil	MAGPADHWPPTVGAFWFHYWLEFWLQFWAATIAAQRAADLGAQLGAKAGRNAGRPQLH
Ga0306923_102363425	3300031910	Soil	MAGPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAAYLGAQLGAKAGRNAARPQLHIVRD
Ga0306923_104744731	3300031910	Soil	PTVGAFWFHYWLEFWLQFWAASIAAQRAADLGAQLGAKAGRNAGRPQLHIVRD
Ga0306923_106657051	3300031910	Soil	MSGPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAAYLGAQLGAKAGRNAGRPQLHIVRD
Ga0306923_107051642	3300031910	Soil	MAGLADHWPPTAGAFWFHYWLEFWLQFWAASIAAQRAADLGAQLGAKAGRNFGRPRLRIVSD
Ga0306923_118213522	3300031910	Soil	MAGPADHWPPTVGAFWFHYWLEFWLQLWAASIAAQRAADLGAQRGAKAGRATGRPQLHIVRD
Ga0306921_119639842	3300031912	Soil	MAGLADHWPPTAGAFWFHYWLEFWLQFWAASIAAQRAADLGAQLGAKAGRNFGRPRLRIVRD
Ga0306921_121526312	3300031912	Soil	PPTVGAFWFHYWLEFWLQFWAASIAAQRAAYLGAQLGAKVGRNAGRPQLHIVRD
Ga0310916_106997811	3300031942	Soil	FSIRLKRPVSVSIYAEVPMAGPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAADLGAQLGAKAGRNAGRPQLHIVRD
Ga0310916_112537052	3300031942	Soil	MAGPADHRPPTIGAFWFHYWLEFWLQFWAASVAAQRADLGAQLGAKAGRNAGRPQLHIVR
Ga0310910_108804891	3300031946	Soil	MAGPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAADLGAQLGAKAGRIAGRPQLHIVRD
Ga0310909_110895722	3300031947	Soil	MAGPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAADLGAQLGAKAGRNAGRPQLPIVRD
Ga0306926_103502831	3300031954	Soil	TIGAFWFHYWLEFWLQFWAASIAAQRADLGAQLGAKAGRNAGRPQLHIVRD
Ga0306926_113621931	3300031954	Soil	MAGPADPWPPTVGAFWFHYWLEFWLQFWAASIAAQRAADLGAQLGAKAGRATGRPQLHIVRD
Ga0306926_121365861	3300031954	Soil	MYAEVPIACPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAADLGAQLGAKAGR
Ga0306922_103351222	3300032001	Soil	SLTGENLSQHRLKRPVSLSIFAEVPMSGPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAAYLGAQLGAKVGRNAGRPQLHIVRD
Ga0306922_106058511	3300032001	Soil	ADHWPPTVGAFWFHYWLEFWLQFWAATIAAQRAADLGAQLGAKAGRNAGRPQLHIVRD
Ga0306922_106209581	3300032001	Soil	MSGPADHWPPTVGAFWFYCWLEFWLQFWAASIAAQRAADLGAQLGAKAGRNA
Ga0318563_104424432	3300032009	Soil	MYAEVPIACPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAADLGAQLGAKAGRNFGRPRLRIVRD
Ga0318563_107644131	3300032009	Soil	MSGPADHWPLTVGAFWFHYWLEFWLQFWAASIAAQRAAYLGAQLGAKVGRNAGR
Ga0318556_106779432	3300032043	Soil	VSDSIYAEMPMAGPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAADLGAQLGAKAGRNAGRPQLHIVRD
Ga0318505_104782982	3300032060	Soil	PFSLTGENLSQHRLKRPVSLSIFAEVPMSGPADHWPLTVGAFWFHYWLEFWLQFWAASIAAQRAAYLGAQLGAKVGRNAGRPQLHIIRD
Ga0318553_104916552	3300032068	Soil	PGRTFFSIRLKRPVSISIFAEVPMAGPADHWPPTAGAFWFHYWLEFWLQFWAASIAAQRAADLGAQLGAKAGRNAGRPQLHIVRD
Ga0306924_112041761	3300032076	Soil	MAGPADHRPPTIGAFWFHYWLEFWLQFWAASVAAQRADLGAQLGAKAGRNAG
Ga0306924_115742002	3300032076	Soil	RPVSLSIFVEVPMAGPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAAYLGAQLGAKAGRNAARPQLHIVRD
Ga0318577_106261351	3300032091	Soil	MAGPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRADLGAQLGAKAGRNAGRPQLHIVR
Ga0318540_104537342	3300032094	Soil	SGPADHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAAYLGAQLGAKVGRNAGRPQLHIVR
Ga0307470_117495872	3300032174	Hardwood Forest Soil	MAGPADHWPSTVGAFWFHYWLEFWLQFWAASIAAQRAAVLGAQLGAKAGRNAGRPQLH
Ga0306920_1001830871	3300032261	Soil	ADHRPPTIGAFWFHYWLEFWLQFWAASIAAQRADLGAQLGAKAGRNAGRPQLHIVRD
Ga0306920_1008016701	3300032261	Soil	VPMAGPADHWPPTVGAFWFHYWLEFWLQFWAATIAAQRAADLGAQLGAKAGRNAGRPQLHIVRD
Ga0306920_1008842701	3300032261	Soil	MAGPTDHWPPTVGAFWFHYWLEFWLQFWAASIAAQRAADLGAQLGAKAGRNAGRPQLHIVRD
Ga0306920_1043708191	3300032261	Soil	MAGPANHWPPTVGAFWLHYWLEFWLQFGAASIAAQRAADLGAQLGAKAGRNAGRPQLHIVRD
Ga0306920_1043787891	3300032261	Soil	MAGPADPWPPTVGAFWFHYWIEFWLQFWAASIAAQRAADLGAQLGAKAGRATGRPQLHIVRD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F098829

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences