NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F098746

Metagenome / Metatranscriptome Family F098746

Go to section:
Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F098746
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 78 residues
Representative Sequence VASGQRTARSGGRPGAKWSRRGSADHKRVLTWSAGRRPQTPAEAGLEASLEIQRPQGAGRPCYEAGNSACRGEWRREAGSQ
Number of Associated Samples 62
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 99.03 %
% of genes from short scaffolds (< 2000 bps) 99.03 %
Associated GOLD sequencing projects 62
AlphaFold2 3D model prediction Yes
3D model pTM-score0.15

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil
(62.136 % of family members)
Environment Ontology (ENVO) Unclassified
(68.932 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(80.583 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 3.67%    β-sheet: 0.00%    Coil/Unstructured: 96.33%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.15
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002660|Ga0005454J37223_102796Not Available566Open in IMG/M
3300003505|JGIcombinedJ51221_10253812Not Available715Open in IMG/M
3300003505|JGIcombinedJ51221_10315546Not Available636Open in IMG/M
3300004099|Ga0058900_1000973Not Available792Open in IMG/M
3300004099|Ga0058900_1013514Not Available657Open in IMG/M
3300004099|Ga0058900_1018965Not Available642Open in IMG/M
3300004100|Ga0058904_1014364Not Available680Open in IMG/M
3300004100|Ga0058904_1016008Not Available706Open in IMG/M
3300004102|Ga0058888_1016224Not Available711Open in IMG/M
3300004102|Ga0058888_1023866Not Available687Open in IMG/M
3300004102|Ga0058888_1029318Not Available752Open in IMG/M
3300004103|Ga0058903_1015175Not Available731Open in IMG/M
3300004103|Ga0058903_1017904Not Available714Open in IMG/M
3300004103|Ga0058903_1020651Not Available745Open in IMG/M
3300004103|Ga0058903_1021746Not Available608Open in IMG/M
3300004103|Ga0058903_1024418Not Available730Open in IMG/M
3300004104|Ga0058891_1022209Not Available675Open in IMG/M
3300004104|Ga0058891_1022323Not Available752Open in IMG/M
3300004116|Ga0058885_1008707Not Available630Open in IMG/M
3300004116|Ga0058885_1008831Not Available630Open in IMG/M
3300004116|Ga0058885_1009827Not Available750Open in IMG/M
3300004116|Ga0058885_1013038Not Available704Open in IMG/M
3300004117|Ga0058893_1002961Not Available558Open in IMG/M
3300004117|Ga0058893_1007957Not Available793Open in IMG/M
3300004118|Ga0058886_1002235Not Available789Open in IMG/M
3300004118|Ga0058886_1003134Not Available715Open in IMG/M
3300004119|Ga0058887_1021358Not Available730Open in IMG/M
3300004119|Ga0058887_1507539Not Available713Open in IMG/M
3300004120|Ga0058901_1025026Not Available725Open in IMG/M
3300004120|Ga0058901_1026443Not Available643Open in IMG/M
3300004121|Ga0058882_1012510Not Available827Open in IMG/M
3300004121|Ga0058882_1033676Not Available524Open in IMG/M
3300004130|Ga0058895_1003813Not Available668Open in IMG/M
3300004131|Ga0058898_1005105Not Available637Open in IMG/M
3300004131|Ga0058898_1013081Not Available755Open in IMG/M
3300004132|Ga0058902_1000862Not Available708Open in IMG/M
3300004132|Ga0058902_1008043Not Available794Open in IMG/M
3300004133|Ga0058892_1004925Not Available600Open in IMG/M
3300004133|Ga0058892_1011943Not Available650Open in IMG/M
3300004133|Ga0058892_1325074Not Available560Open in IMG/M
3300004134|Ga0058906_1011331Not Available670Open in IMG/M
3300004134|Ga0058906_1012259Not Available647Open in IMG/M
3300004134|Ga0058906_1013264Not Available600Open in IMG/M
3300004134|Ga0058906_1347646Not Available737Open in IMG/M
3300004135|Ga0058884_1405511Not Available501Open in IMG/M
3300004136|Ga0058889_1000462Not Available713Open in IMG/M
3300004136|Ga0058889_1037277Not Available593Open in IMG/M
3300004137|Ga0058883_1018572Not Available720Open in IMG/M
3300004137|Ga0058883_1022835Not Available757Open in IMG/M
3300004137|Ga0058883_1023441Not Available746Open in IMG/M
3300004138|Ga0058905_1000735Not Available567Open in IMG/M
3300004138|Ga0058905_1027276Not Available748Open in IMG/M
3300004140|Ga0058894_1021989Not Available638Open in IMG/M
3300004140|Ga0058894_1023640Not Available557Open in IMG/M
3300004294|Ga0068945_1013166Not Available641Open in IMG/M
3300004466|Ga0068982_1007952Not Available628Open in IMG/M
3300004469|Ga0068931_1019061Not Available797Open in IMG/M
3300004469|Ga0068931_1315941Not Available621Open in IMG/M
3300004473|Ga0068919_1013374Not Available757Open in IMG/M
3300004482|Ga0068936_1126673Not Available625Open in IMG/M
3300004499|Ga0068984_1000325Not Available691Open in IMG/M
3300004561|Ga0068921_1213391Not Available541Open in IMG/M
3300004610|Ga0068927_1003399Not Available628Open in IMG/M
3300004610|Ga0068927_1019984Not Available719Open in IMG/M
3300004631|Ga0058899_10036195Not Available645Open in IMG/M
3300004631|Ga0058899_10131390Not Available756Open in IMG/M
3300004631|Ga0058899_10132288Not Available747Open in IMG/M
3300004631|Ga0058899_10137091Not Available533Open in IMG/M
3300004631|Ga0058899_10142067Not Available542Open in IMG/M
3300004631|Ga0058899_10225084Not Available563Open in IMG/M
3300004631|Ga0058899_10236303Not Available647Open in IMG/M
3300004631|Ga0058899_12174734Not Available765Open in IMG/M
3300004800|Ga0058861_11908515Not Available774Open in IMG/M
3300004803|Ga0058862_12762325Not Available734Open in IMG/M
3300005644|Ga0075036_1781603Not Available547Open in IMG/M
3300007219|Ga0075025_1027364Not Available576Open in IMG/M
3300009230|Ga0103855_10052517Not Available748Open in IMG/M
3300009233|Ga0103856_10042540Not Available797Open in IMG/M
3300009247|Ga0103861_10045597Not Available667Open in IMG/M
3300010200|Ga0127507_1073248Not Available598Open in IMG/M
3300011063|Ga0138537_1079469Not Available755Open in IMG/M
3300011120|Ga0150983_15819447Not Available580Open in IMG/M
3300012385|Ga0134023_1076183Not Available704Open in IMG/M
3300012387|Ga0134030_1203131Not Available706Open in IMG/M
3300016698|Ga0181503_1198150Not Available919Open in IMG/M
3300016705|Ga0181507_1007680Not Available868Open in IMG/M
3300016730|Ga0181515_1338151Not Available555Open in IMG/M
3300019194|Ga0184586_108994Not Available684Open in IMG/M
3300019241|Ga0187793_1197940Not Available698Open in IMG/M
3300019258|Ga0181504_1521967Not Available631Open in IMG/M
3300021860|Ga0213851_1872028Not Available580Open in IMG/M
3300022505|Ga0242647_1033826Not Available561Open in IMG/M
3300022509|Ga0242649_1064757Not Available538Open in IMG/M
3300022513|Ga0242667_1007106Not Available932Open in IMG/M
3300030545|Ga0210271_10323070Not Available520Open in IMG/M
3300030583|Ga0210262_1114268Not Available669Open in IMG/M
3300030622|Ga0265391_10153105Not Available655Open in IMG/M
3300030842|Ga0075404_10034656Not Available649Open in IMG/M
3300030850|Ga0075387_11772485Not Available530Open in IMG/M
3300030945|Ga0075373_11657051Not Available515Open in IMG/M
3300030969|Ga0075394_10055252Not Available623Open in IMG/M
3300031446|Ga0170820_13393305Not Available570Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil62.14%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil10.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil9.71%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland3.88%
River WaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water2.91%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds1.94%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.94%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated1.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.97%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.97%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.97%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.97%
Host-AssociatedHost-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated0.97%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002660Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF103 (Metagenome Metatranscriptome, Counting Only)EnvironmentalOpen in IMG/M
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300004099Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF236 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004100Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF244 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004102Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF212 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004103Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF242 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004104Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004116Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF206 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004117Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF222 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004118Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF208 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004119Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF210 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004120Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004121Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004130Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF226 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004131Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF232 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004132Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF240 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004133Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF220 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004134Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF248 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004135Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF204 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004136Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF214 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004137Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF202 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004138Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF246 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004140Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF224 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004294Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 33 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004466Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 80 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004469Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 16 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004473Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004482Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 24 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004499Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 82 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004561Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 6 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004610Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 12 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004800Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300004803Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005644Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_053 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300007219Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaT_SC_2013 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009230Microbial communities of water from Amazon river, Brazil - RCM8EnvironmentalOpen in IMG/M
3300009233Microbial communities of water from Amazon river, Brazil - RCM9EnvironmentalOpen in IMG/M
3300009247Microbial communities of water from Amazon river, Brazil - RCM14EnvironmentalOpen in IMG/M
3300010200Peat moss associated microbial communities from Sphagnum species from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MT (Eukaryote Community Metatranscriptome)Host-AssociatedOpen in IMG/M
3300011063Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 15 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012385Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012387Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016698Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016705Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016730Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019194Soil microbial communities from Bohemian Forest, Czech Republic ? CSE1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019241Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019258Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021860Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022505Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022509Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022513Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300030545Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO142-VCO033SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030583Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO145-ARE023SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030622Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE044SO (Eukaryote Community Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300030842Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB3 SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030850Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB1 SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030945Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030969Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0005454J37223_10279613300002660Forest SoilVAPGKRTAKSGGRPGARWLRRGSAIHKRVLTWFASRRPQTPAEASLDASLKIQRPQGTGRPCYEADNSACRGEWRREAGSQCAPNASMGKREWRTPIP
JGIcombinedJ51221_1025381223300003505Forest SoilVAPGQRTAKSGGRPGARWLRRGSAIHKRVLTWFASRRPQTPAEASLDASLKIQRPQGTGRPCYEADNS
JGIcombinedJ51221_1031554613300003505Forest SoilVASGQRTARSGGRPGAKWSRRGSADHKRVLTWSAGRRPQTPAEAGLEASLEIQRPQGAGRPCYEAGNSACRGEWRREA
Ga0058900_100097313300004099Forest SoilVASGQRTARSGGRPGAKWSRRGSADHKRVLTWSAGRRPQTPAEAGLEASLEIQRPQGAGRPCYEAGNSACRGEWRREAGSQSAPNASPGKRVWRTPIP
Ga0058900_101351413300004099Forest SoilVAPGQRTAKNGGRPGANGKDADTQSKRVFTWFVSRRPQTPAEASLEASLEIQRPQGAGRPCYEAETTPLAVENGVGKLAA
Ga0058900_101896513300004099Forest SoilVAPGKRTAKSGGRPSARWSRRGSAIHKRVLTWFASRRPQTPAEASLDASLKIQRPQGTG
Ga0058904_101436423300004100Forest SoilVAPGKRTAKSGGRPSARWLRRGSAIHKRVLTWFASRRPQTPAEASLDASLKIQRPQGTGRPCYEADNSACRG
Ga0058904_101600813300004100Forest SoilVASGQRTAKNGGCPGARWLRRGSANHKRVLTWFASRRPQTPAEASLDASLKIQRPQGTGRPCYEADNSACRGEWRREAGS
Ga0058888_101622413300004102Forest SoilVAPGKRTAKNGGCPGARWLRRGSAIHKRVLTWFASRRPQTPAEASLDASLKIQRPQGTGRPCYEADNSACRG
Ga0058888_102386623300004102Forest SoilVASGQRTAKNGGCPGARWLRRGSANHKRVLTWFASRRPQTPAEASLDASLKIQRPQGTGRPCYEA
Ga0058888_102931823300004102Forest SoilVASGQRTARSGGRPGAKWSRRGSADHKRVLTWSAGRRPQTPAEAGLEASLEIQRPQGAGRPCYEAGNSACRGEWRREAGSQCAPN
Ga0058903_101517513300004103Forest SoilVASGQRAAKSGGRPGARRQRRGSADHKRVFARFADRRPQTPAKASLDASLKIQRPQGAGRPCYEADNSACRGEWRREAGSQCAPNASMGKRVWRAPIP
Ga0058903_101790423300004103Forest SoilVAPGQRTAKSGGRPGARWLRRGSAIHKRVLTWFASRRPQTPAEASLDASLKIQRPQGTGRPCYEADNSACRG
Ga0058903_102065123300004103Forest SoilVAPGKRAAKSGGRPGARWLRRGSAIHKRVLTWFASRRPQTPAEASLDASLKIQRPQGTGRPCYEADNSACRGEWRREAGSQ
Ga0058903_102174623300004103Forest SoilVASGQRTAKNGGCPGARWLRRGSANHKRVLTWFASRRPQTPAEASLDASLKIQRPQGTGR
Ga0058903_102377823300004103Forest SoilVAPGQRTAKSGGRPGANGKDADTQHKRVFTWFVSRRPQTSAEASLEASLKIQRPQGAGRPCYEADNPLAVENGVGKLAA
Ga0058903_102441813300004103Forest SoilVAPGQRTAKNGGRPGANGKDADTQSKRVFTWFVSRRPQTPAEASLEASLEIQRPQGAGRPCYEAETTPLAVEN
Ga0058891_102220913300004104Forest SoilVAPGQRTANSGGRPGAKWSRRGATDHKRVLTWFVSRRPQTPAEASLEASLKIQCPQGAGRPCYEAGNSACRGEWRREAGSQCAPNVSTGKRVRRTP
Ga0058891_102232313300004104Forest SoilVASGKRTAKSGGCPGAKRSRRGFANHKRVLIWSAGRRPQTPAGAGLEASLEIQRPQGAGRPCYEAGNSACRGEWRREAGSQCAPN
Ga0058885_100870713300004116Forest SoilVASGQRTAKNGGCPGARWLRRGSANHKRVLTWFASRRPQTPAEASLDASLKIQRPQGTGRPCYEADNSACRG
Ga0058885_100883113300004116Forest SoilVVPGKRAAKSGGCPGARWLRRGSAIHKRVLTWFASRRPQTPAEASLDASLKIQRPQGTGRPCYEADNSACRG
Ga0058885_100982723300004116Forest SoilVASGKRTAKSGGRPGAKRSRRGFANHKRVLIWSAGRRPQTPAGAGLEASLEIQRPQGAGRPCYEAGNSACRGEWRREAGSQCA
Ga0058885_101303813300004116Forest SoilVASGQRTARSGGRPGAKWSRRGSADHKRVLTWSAGRRPQTPAEAGLEASLEIQRPQGAGRPCYEAGNSACR
Ga0058893_100296113300004117Forest SoilVASGQRAAKSGGRPGARRQRRGSADHKRVFARFADRRPQTPAKASLDASLEIQRPQGAGRPCYEADNSACRGEWRREAGSQCAPNASMGKRVWRAPIP
Ga0058893_100795713300004117Forest SoilVASGQRTAKNGGCPGARWLRRGSANHKRVLTWFASRRPQTPAEASLDASLKIQRPQGTGRPCYEADNSACRGEWRREAGSQCAPNASMGKRAWRTP
Ga0058886_100223523300004118Forest SoilVASGQRTARSGGRPGAKWSRRGSADHKRVLTWSAGRRPQTPAEAGLEASLEIQRPQGAGRPCYEAGNSACRGEWRREAGSQSAPNASMGKRVRRTPI
Ga0058886_100313433300004118Forest SoilVAPGQRTANRGGRPGAKWSRRGSTGHKRVLTWFVSRRPQTPAEASLEASLEIQRPQGAGRPCYEAGDSACRGEWRREAGSQCAPNVS
Ga0058887_102135823300004119Forest SoilVASGQRTARSGGRPGAKWSRRGSADHKRVLTWSAGRRPQTPAEAGLEASLEIQRPQGAGRPCYEAGNSACRGEWRRE
Ga0058887_150753913300004119Forest SoilVASGQRTAKNGGCPGARWLRRGSANHKRVLTWFASRRPQTPAEASLDASLKIQRPQGTGRPCYEADNS
Ga0058901_102502613300004120Forest SoilVASGQRAAKSGGRPGARRQRRGSADHKRVFARFADRRPQTPAKASLDASLKIQRPQGAGRPCYEADNSACRGEWRREAGSQCAPNASMGKRVWRAPIPQFVP
Ga0058901_102644313300004120Forest SoilVASGQRTARSGGRPGAKWSRRGSADHKRVLTWSAGRRPQTPAEAGLEASLEIQRPQGAGRPCYEAGNSACRGEWRREAGSQSAPNAS
Ga0058882_101251013300004121Forest SoilVALGQRTVKSSGRPSAKWSRHGPCSHKRVLTWFASRRLQTPVQASQDASLEFQRTKVAERPCYEAGNSACRGEWRREAGSPGRVRLMPAWERESGELPAPNLPP
Ga0058882_103367623300004121Forest SoilVASGQRTAKNGGCPGARWLRRGSANHKRVLTWFASRRPQTPAEASLDASLKIQRPQGTGRPCYEADNSACRGEWRREAGSQCAPNASMGKREWRTPIP
Ga0058895_100381313300004130Forest SoilVASGQRAAKSGGRPGARRQRRGSADHKRVFARFADRRPQTPAQASLDASLEIQRPQGAGRPCYEADNSACRGEWRREAGSQCAPNASMGKRVWRAPIPQFV
Ga0058898_100510523300004131Forest SoilVVSGKRTAKSGGRPGAKRSRRGFANHKRVLIWSAGRRPQTPAVAGLEASLEIQRPQGAGRPCYEAGNSACRGEWRREA
Ga0058898_101308123300004131Forest SoilVASGQRTARSGGRPGAKWSRRGSADHKRVLTWSAGRRPQTPAEAGLEASLEIQRPQGAGRPCYEAGNSACRGEWRREAGSQRAPN
Ga0058902_100086213300004132Forest SoilVASGQRTARSGGRPGAKWSRRGSADHKRVLTWSAGRRPQTPAEAGLEASLEIQRPQGAGRPCYEAGNSACRGEWRREAGSQ
Ga0058902_100804313300004132Forest SoilVVPGQRTAKSGGRPGARWLRRGSAIHKRVLTWFASRRPQTPAEASLDASLKIQRPQGTGRPCYEADNSACRGKWRREAGSQCAPNASMGKREWRTPIP
Ga0058892_100492523300004133Forest SoilVAPGQRTANRGGRPGAKWSRRGSTGHKRVLTWFVSRRPQTSAEASLEASLEIQRP
Ga0058892_101194313300004133Forest SoilVASGKHTAKSGGRPGAKRSRRGFANHKRVLIWSAGRRPQTPAEVGLEASLEIQRPQGAGRPCYEAGNSACRGEWRREAGSQCAP
Ga0058892_132507423300004133Forest SoilVAPGKRTAKSGGRPSARWLRRGSAIHKRVLTWFASRRPQTPAEASLDASLKIQRPQGTGRPCYEADNSACRGKWRREAGS
Ga0058906_101133113300004134Forest SoilVVPGQRAAKSGGRPGARWLRRGSAIHKRVLTWFASRRPQTPAEASLDASLKIQRPQGTGRPCYEADNSACRGEWRREAGS
Ga0058906_101225923300004134Forest SoilVAPGQRTAKSGGRPGARWLRRGSAIHKRVLTWFASRRPQTPAEASLDASLKIQRPQGT
Ga0058906_101326413300004134Forest SoilVAPGQRTANRGGRPGAKWSRRGSTGHKRVLTWFVSRRPQTPAEASLEASLEIQ
Ga0058906_134764623300004134Forest SoilVASGQRTASSGGRPGAKWLRRGSADHKRVLAWSAGRRPQTPAEAGLEASLKIQRPQGAGRPCYEAGNSACRGEWRREAG
Ga0058884_140551113300004135Forest SoilVAPGKRTAKSGGRPSARWLRRGSAIHKRVLTWFASRRPQTPAEASLDASLKIQRPQGTGRPCYEADNSACRGEWRREAGS
Ga0058889_100046223300004136Forest SoilVASGQRAAKSGGRPGARRQRRGSADHKRVFARFADRRPQTPAQASLDASLEIQRPQGAGRPCYEADNSACRGEWRREAGSQCAPNASMGKRVWRAPIP
Ga0058889_103727713300004136Forest SoilVASGQRTARSGGRPGAKWSRRGSADHKRVLTWSAGRRPQTPAEAGLEASLEIQRPQGAGRPCYEAGNSAC
Ga0058883_101857213300004137Forest SoilVASGKRTAKSGGRPGAKRSRRGFANHKRVLIWSAGRRPQTPAGAGLEASLEIQRPQGAGRPCYEAGNSACRGEWRREAGSQCAPN
Ga0058883_102283523300004137Forest SoilVASGQRTARSGGRPGAKWSRRGSADHKRVLTWSAGRRPQTPAEAGLEASLEIQRPQGAGRPCYEAGNSACRGEWRREAGSQRAPNVSMGKRVWRTPIP
Ga0058883_102344113300004137Forest SoilVAPGQRTAKNGGRPGANGKDADTQSKRVFTWFVSRRPQTPAEASLEASLEIQRPQGAGRPCYEAETTPLAVENGVGKLA
Ga0058905_100073513300004138Forest SoilVAPGKRTAKSGGRPSARWSRRGSAIHKRVLTWFASRRPQTPAEASLDASLKIQRPQGTGRPCYEADNSACRGEWRREAGSQCAPNASMGKREWRTPIP
Ga0058905_102727623300004138Forest SoilVASGQRTARSGGRPGAKWSRRGSADHKRVLTWSAGRRPQTPAEAGLEASLEIQRPQGAGRPCYEAGNSACRGEWRREAGSQS
Ga0058894_102198913300004140Forest SoilVVSGQRAAKSGGRPGARRQRRGSADHKRVFARFADRRPQTPAKASLDASLEIQRPQGAG
Ga0058894_102364023300004140Forest SoilVVSGKHTATSGGRPGAKRSRRGFANHKRVLIWSAGRRPQTPAEVGLEASLEIQRPQGAGRPCYEAGNSACRGEWRREAGSQCA
Ga0068945_101316623300004294Peatlands SoilVAPGQRTAKSGGRPGARWQRRGSADHKRVFAWFAGRRPQTPVEASLEASLEIQRPQGAGRPCYEAGNSACRGEWRREAGSQC
Ga0068982_100795223300004466Peatlands SoilVAPGQRTAKSGGRPGARWQRRGSADHKRVFAWFAGRRPQTPVEASLEASLEIQRPQGAGRPCYEAGNSACRGEWRREAGS
Ga0068931_101906123300004469Peatlands SoilVAPGQRTVKSGGRPGAKWQRRGYAITNVCLPGLPVGDPQSPAEASQEASLKIQRPQGAGRPCYESGNSACRGEWRREAGSPARARLMSAWERESGELP
Ga0068931_131594123300004469Peatlands SoilVASGQRTAKSGGRPEAKGLTRNRSHKRVLTRFVSRRPQTPAEASLEASLKIQRPQGAGRPCYEAGNPLAVENGVGKLAA
Ga0068919_101337423300004473Peatlands SoilVAPGQRTVKSGGRPGAKWQRRGYAITNVCLPGLPVGDPQSPAEASQEASLKIQRPQGAGRPCYEAGNSACRGEWRREAGSQCA
Ga0068936_112667323300004482Peatlands SoilVASGQRTAKSGGRPEAKGKTRNRSHKRVLTRFVSRRPQTPAEASLEASLKIQRPQGAGRPCYEAGNPLAVENGVGKLAA
Ga0068984_100032523300004499Peatlands SoilVAPGQRTAKSGGRPGARWQRRGSADHKRVFAWFAGRRPQTPVEASLEASLEIQRPQGAGRPCYEAGNSACRGEWR
Ga0068921_121339123300004561Peatlands SoilVASGQRTAKSGGRPEAKGLTRNRSHKRVLTRFVSRRPQTPAEASLEASLKIQ
Ga0068927_100339923300004610Peatlands SoilVAPGQRTVKSGGRPGAKWQRRGYAITNVCLPGLPVGDPQSPAEASQEASLKIQRPQGAGRPCYEAGNSACRGEWRREAGSQ
Ga0068927_101998423300004610Peatlands SoilVAPGQRTAKSGGRPGARWQRRGSADHKRVFAWFAGRRPQTPVEASLEASLEIQRPQGAGRPCYEAGNSACRGEWRREAGSQ
Ga0058899_1003619523300004631Forest SoilVASGQRTASSGGRPGAKWSRRGSADHKRVLAWSAGRRPQTPAEAGLEASLKIQRPQGAGRPCYEAGNSACRGEWRREAGSQSA
Ga0058899_1013139033300004631Forest SoilVAPGQRTANRGGRPGAKWSRRGSTGHKRVLTWFVSRRPQTPAEASLEASLEIQCSKGAGRPCYEADNSACRGEWRREAGSRSAP
Ga0058899_1013228813300004631Forest SoilVVSGQRTAKSGGRPGAKRSRRGFANHKRVLIWSAGRRPQTPAGAGLEASLEIQRPQGAGRPCYEAGNSACRGEWRREAGSQSAPN
Ga0058899_1013709113300004631Forest SoilVAPGQRAAKSGGRPGARWQRRGSAGHKRVFTWFVSRRPQTPAEASLEASLEIQRPQGAGRPCYEAGNSACRGEW
Ga0058899_1014206733300004631Forest SoilVASGKRTAKSGGRPGAKRSRRGFANHKRVLIWSAGRRPQTPAGAGLEA
Ga0058899_1022508413300004631Forest SoilVAPGQRAAKSGGRPGAKRPRRGSPDHKRVLTWFARRRPQTPAEASLEASLEIQPPQGAGRPCYEAGDSACRGEWRREAGSQCAPNASMGKRAW
Ga0058899_1023630323300004631Forest SoilVVSGKRTAKSGGRPGAKRSRRGFANHKRVLIWSAGRRPQTPAVAGLEASLEIQRPQGAGRPCYEAGNSACRGEWRREAGSQCA
Ga0058899_1217473413300004631Forest SoilVALGQRTVKSSGRPSAKWSRHGPCSHKRVLTWFASRRLQTPVQASQDASLEFQRTKVAERPCYEAGNSACRGEWRREAGSPGRVRLMPAWERESGELPA
Ga0058861_1190851523300004800Host-AssociatedVAPGQRIARSDGRPGAKWSRRGSKGHKRVLTWFVSRRPQTPAEASLEASLEIQPPQGAERPCYEAGNSASPGEWRREAGSQRAPNASMGKRVWRTPIPH
Ga0058862_1276232513300004803Host-AssociatedVAPGQRIARSDGRPGAKWSRRGSKGHKRVLTWFVSRRPQTPAEASLEASLEIQPPQGAERPCYEAGNSASPGEWRREAGSQRAPNASMGKRVWRTPIPQ
Ga0075036_178160323300005644Permafrost SoilVASGQRTARNGGRPEANRSRRGDCSHKRVLTWFVSRRPQTSAEASLEASLKIQ
Ga0075025_102736423300007219WatershedsVAPGQRTTKSDGRPGAKWSRRGSTDHKRVLTWFVSRRPQTSAEASLEASLEIQ
Ga0103855_1005251713300009230River WaterVAPGKRTAKSGGCPGAKMVKTRIRSHKRVLPWLTDRRPQTSVQASQEASLEIQRPQGAGRPCYEAGNSACRGEWRREAGGLERRLTPARER
Ga0103856_1004254013300009233River WaterVAPGQRTAKSGGRPGAKKVKTRIRSHNRVFTWLTDRRLQTPVQASQEASLKIQRPQGAGRPCYEAENSASRGEWRREAGSRTSVRRLMLAWEREIG
Ga0103861_1004559713300009247River WaterVAPGQRTANSGGRPGAKWSRRGFAITNVFLTWFASRRPQTPAEASLDASLEMQRPQGAGR
Ga0127507_107324813300010200Host-AssociatedVAPGQRAAKSGGRPGANGKDADEQSHKRVFTWFASRRPQTPAEASLEASLKIQRPQGAGRPCYEA
Ga0138537_107946923300011063Peatlands SoilVAPGQRIAKSDGRPGANGKDADPQSQACLYLVPSRRPQTPAEASLEASLKIQRPQGAGRPCYEAGNSACRGEWRREAGSQCAPNVS
Ga0150983_1581944713300011120Forest SoilVAPGQRIANSDGRPGAKWSRRGSTDYKRVLTWFVSRRPQTPAEASLEASLEIQRPQGAGRPCYEA
Ga0134023_107618313300012385Grasslands SoilVAPGQRTAKSGGRPGAKWSRRESKCHKRVLTWFVSRRPQTPAEASLEASLKIQPPQGAGRPCYEAG
Ga0134030_120313113300012387Grasslands SoilVAPGQRAAKSGGRPGAKWSRRESKCHKRVLTWFVSRRPQTPAEASLEASLKIQPPQGAGRPCYEAGNSASRGEWRREAGSQRAPNVSAGK
Ga0181503_119815023300016698PeatlandVAPGQRTAKSGGRPGAKWSRRKRSRTYVLTWLAGWREQAPAQASQEASLEIQRPQGAERPCYEAGNSACRGEWRREADSPERARPMSAREREHGELPD
Ga0181507_100768023300016705PeatlandVAPGQRTAKSGGRPGAKWSRRKRSRTYVLTWLAGWREQAPAQASQEASLEIQRPQGAERPCYEAGNSACRGEWRREADSPERARPMSAREREHGELPDPNL
Ga0181515_133815113300016730PeatlandVAPGQRTVKNGGRPGAKWSRRGESHHKRVLTWFASRRLQTPAEASLEASLKIQRPQGAGRPCYE
Ga0184586_10899413300019194SoilVAPGQRTANNGGRPGAKWSRRGFANHKRVLTWFASRRLQTPAEASLEASLKIQRPQGAGRPCYEA
Ga0187793_119794013300019241PeatlandVAPGQRADKIGGRPGARWLRRGSLGHKRVFTWFVSRRPQTPAEASLEASLEIQCPQGAERPCYEA
Ga0181504_152196713300019258PeatlandVAPGQRTVKNGGRPGAKWSRRGESHHKRVLTWFASRRLQTPAEASLEASLKIQRPQGAGRPCYEAGNSACRGEWRREAGSQ
Ga0213851_187202813300021860WatershedsVAPGQRTAKSGGRPGAKRLRRGSTDHKRVFTWFVSRRPQTPAEASLEASLKIQRPQGAGRPCYEA
Ga0242647_103382613300022505SoilVAPGKRTAKSGGRPSARWLRRGSAIHKRVLTWFASRRPQTPAEASLEASLEIQRPQG
Ga0242649_106475713300022509SoilVAPGKRTAKSGGRPSARWLRRGSAIHKRVLTWFASRRPQTPAEASLDASLKIQRPQGTGRPCYEAENSACRGEWRREAGSPARVRLMSAWERESG
Ga0242667_100710613300022513SoilVAPGQRIAKSDGRPGAKWSRRGSTDHKRVLTWFVSRRPQTPAEASLEASLEIQRPQGAGRPCYEAGNSACRGEW
Ga0210271_1032307013300030545SoilVAPGQRTANNGGRPGAKWSRRGFANHKRVLTWFASRRLQTPAEASLEASLKIQRPQGTGRPCYEAGNSACRGEWRREAGSQ
Ga0210262_111426813300030583SoilVAPGQRIAKSDGRPGAKWSRRGFANHKRVLTWFASRRLQTPAEASLEASLK
Ga0265391_1015310513300030622SoilVAPGQRTANNGGRPGAKWSRRGFANHKRVLTWFASRRLQTPAEASLEAS
Ga0075404_1003465613300030842SoilVVSGKRTAKSGGRPGAKRSRRGFANHKRVLIWSAGRRPQTPAEVGLEASLEIQRPQGAGRPCYEAGNSACRGEWRREAG
Ga0075387_1177248513300030850SoilVVSGKRTAKSGGRPGAKRSRRGFANHKRVLIWSAGRRPQTPAEAGLEASL
Ga0075373_1165705113300030945SoilVAPGQRIARSDGRPGAKWSRRGSKGHKRVLTWFVSRRPQTPAEASLEASLEIQ
Ga0075394_1005525213300030969SoilVVSGKRTAKSGGRPGAKRSRRGFANHKRVLIWSAGRRPQTPAEVGLEASLEIQRPQGAGRPCYEAGNSACRGEWRREAGSQ
Ga0170820_1339330513300031446Forest SoilVAPGQRIAKSDGRPGAKWSRRGSKCHKRVLTWFVSRRPQTPAEASLEASLKIQPPQGAGRPCYEAGNSA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.