Metagenome Family F098628

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098628
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	93 residues
Representative Sequence	MSNEENNGKLKVDIYVPLDACACEWDKFMNRVFVELTPYIKHIDYDTKNLNSVEARNLNLHNKCIVVDGEKKFSSSITLKRELPRLLKAKGLI
Number of Associated Samples	47
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	41.18 %
% of genes near scaffold ends (potentially truncated)	16.50 %
% of genes from short scaffolds (< 2000 bps)	47.57 %
Associated GOLD sequencing projects	37
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (69.903 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface (32.039 % of family members)
Environment Ontology (ENVO)	Unclassified (46.602 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Sediment (saline) (37.864 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.06% β-sheet: 17.36% Coil/Unstructured: 49.59%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
c.47.1.15: KaiB-like	d1t4za1	1t4z	0.74059
c.47.1.0: automated matches	d2wz9a_	2wz9	0.72532
c.47.1.0: automated matches	d6x0ba_	6x0b	0.72508
c.47.1.0: automated matches	d2rema_	2rem	0.71642
c.47.1.1: Thioltransferase	d1gh2a_	1gh2	0.71347

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF01758	SBF	14.56
PF13187	Fer4_9	14.56
PF04307	YdjM	13.59
PF01451	LMWPc	3.88
PF01966	HD	3.88
PF00005	ABC_tran	2.91
PF01022	HTH_5	2.91
PF13847	Methyltransf_31	1.94
PF00037	Fer4	1.94
PF08241	Methyltransf_11	1.94
PF13458	Peripla_BP_6	0.97
PF14691	Fer4_20	0.97
PF13426	PAS_9	0.97
PF13589	HATPase_c_3	0.97
PF04191	PEMT	0.97
PF00004	AAA	0.97
PF04304	DUF454	0.97
PF12675	DUF3795	0.97
PF01208	URO-D	0.97
PF13649	Methyltransf_25	0.97
PF03599	CdhD	0.97
PF03358	FMN_red	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG1988	Membrane-bound metal-dependent hydrolase YbcI, DUF457 family	General function prediction only [R]	13.59
COG0407	Uroporphyrinogen-III decarboxylase HemE	Coenzyme transport and metabolism [H]	0.97
COG1456	CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein)	Energy production and conversion [C]	0.97
COG2069	CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein)	Energy production and conversion [C]	0.97
COG2832	Uncharacterized membrane protein YbaN, DUF454 family	Function unknown [S]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.90 %
All Organisms	root	All Organisms	30.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.90 %
cellular organisms	root	All Organisms → cellular organisms	30.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.90 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	22.33 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	7.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.90 %
Asgard group	clade	All Organisms → cellular organisms → Archaea → Asgard group	18.45 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.90 %
Candidatus Lokiarchaeota	phylum	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota	17.48 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.97 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.90 %
unclassified Lokiarchaeota	no rank	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota	6.80 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	0.97 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.90 %
Candidatus Lokiarchaeota archaeon Loki_b32	species	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon Loki_b32	3.88 %
Candidatus Lokiarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	2.91 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	0.97 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001749\|JGI24025J20009_10111575	Not Available	750	Open in IMG/M
3300001752\|JGI2173J19968_10021748	Not Available	2241	Open in IMG/M
3300001782\|WOR52_10019564	All Organisms → cellular organisms → Archaea	7228	Open in IMG/M
3300002052\|SMTZ1_10001237	Not Available	41857	Open in IMG/M
3300002053\|SMTZ23_10000664	Not Available	47284	Open in IMG/M
3300002053\|SMTZ23_10004889	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota	19363	Open in IMG/M
3300002053\|SMTZ23_10016654	Not Available	10458	Open in IMG/M
3300002053\|SMTZ23_10024813	Not Available	15077	Open in IMG/M
3300002053\|SMTZ23_10032028	Not Available	10697	Open in IMG/M
3300002180\|JGI24724J26744_10135021	Not Available	839	Open in IMG/M
3300003142\|Ga0052242_1016703	Not Available	907	Open in IMG/M
3300004029\|Ga0055442_10059660	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon Loki_b32	1048	Open in IMG/M
3300005253\|Ga0073583_1135492	All Organisms → cellular organisms → Bacteria	35795	Open in IMG/M
3300005346\|Ga0074242_11709941	Not Available	826	Open in IMG/M
3300005663\|Ga0073582_170472	Not Available	1052	Open in IMG/M
3300005782\|Ga0079367_1151874	Not Available	916	Open in IMG/M
3300005821\|Ga0078746_1062813	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon Loki_b32	818	Open in IMG/M
3300005832\|Ga0074469_11001963	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota	1991	Open in IMG/M
3300008516\|Ga0111033_1214438	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota	1653	Open in IMG/M
3300009034\|Ga0115863_1001916	Not Available	32896	Open in IMG/M
3300009034\|Ga0115863_1042758	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	5891	Open in IMG/M
3300009034\|Ga0115863_1062486	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	4737	Open in IMG/M
3300009034\|Ga0115863_1079710	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota	4123	Open in IMG/M
3300009034\|Ga0115863_1106182	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	3494	Open in IMG/M
3300009034\|Ga0115863_1130945	Not Available	3089	Open in IMG/M
3300009034\|Ga0115863_1187630	Not Available	2500	Open in IMG/M
3300009034\|Ga0115863_1201067	Not Available	2401	Open in IMG/M
3300009034\|Ga0115863_1219412	All Organisms → cellular organisms → Archaea	2279	Open in IMG/M
3300009150\|Ga0114921_10005489	All Organisms → cellular organisms → Bacteria	6452	Open in IMG/M
3300009150\|Ga0114921_10083891	Not Available	2083	Open in IMG/M
3300009150\|Ga0114921_11194838	Not Available	569	Open in IMG/M
3300009150\|Ga0114921_11421572	Not Available	520	Open in IMG/M
3300009488\|Ga0114925_10030026	Not Available	3171	Open in IMG/M
3300009488\|Ga0114925_10036158	Not Available	2918	Open in IMG/M
3300009488\|Ga0114925_10060910	Not Available	2302	Open in IMG/M
3300009488\|Ga0114925_10094506	Not Available	1880	Open in IMG/M
3300009488\|Ga0114925_10098817	Not Available	1842	Open in IMG/M
3300009488\|Ga0114925_10148006	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon Loki_b32	1527	Open in IMG/M
3300009488\|Ga0114925_10226341	Not Available	1249	Open in IMG/M
3300009488\|Ga0114925_10325336	Not Available	1048	Open in IMG/M
3300009488\|Ga0114925_10348111	Not Available	1015	Open in IMG/M
3300009488\|Ga0114925_10977550	Not Available	615	Open in IMG/M
3300009488\|Ga0114925_11434711	Not Available	512	Open in IMG/M
3300009499\|Ga0114930_10012123	Not Available	6367	Open in IMG/M
3300009499\|Ga0114930_10348887	Not Available	696	Open in IMG/M
3300009788\|Ga0114923_10080821	Not Available	2255	Open in IMG/M
3300009788\|Ga0114923_10620505	Not Available	813	Open in IMG/M
3300009788\|Ga0114923_10702678	Not Available	764	Open in IMG/M
3300010413\|Ga0136851_10176544	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota	2215	Open in IMG/M
3300010413\|Ga0136851_10272750	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota	1723	Open in IMG/M
3300010413\|Ga0136851_10942948	Not Available	841	Open in IMG/M
3300010413\|Ga0136851_11109989	Not Available	767	Open in IMG/M
3300011118\|Ga0114922_11275543	Not Available	593	Open in IMG/M
3300017963\|Ga0180437_10002377	Not Available	30156	Open in IMG/M
3300017963\|Ga0180437_10015840	Not Available	8588	Open in IMG/M
3300017963\|Ga0180437_10031044	All Organisms → cellular organisms → Bacteria	5423	Open in IMG/M
3300017991\|Ga0180434_10881120	Not Available	674	Open in IMG/M
3300018080\|Ga0180433_10003117	Not Available	24690	Open in IMG/M
3300018080\|Ga0180433_10096379	Not Available	2566	Open in IMG/M
3300024263\|Ga0209978_10007899	All Organisms → cellular organisms → Bacteria	4998	Open in IMG/M
3300024265\|Ga0209976_10011621	Not Available	4685	Open in IMG/M
3300024265\|Ga0209976_10761668	Not Available	504	Open in IMG/M
3300024353\|Ga0209979_1010919	Not Available	6083	Open in IMG/M
3300024432\|Ga0209977_10000361	Not Available	17701	Open in IMG/M
3300024432\|Ga0209977_10001128	All Organisms → cellular organisms → Bacteria	11461	Open in IMG/M
3300024432\|Ga0209977_10001256	Not Available	11073	Open in IMG/M
3300024432\|Ga0209977_10028422	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota	2686	Open in IMG/M
3300024432\|Ga0209977_10047549	Not Available	2086	Open in IMG/M
3300024432\|Ga0209977_10172215	Not Available	1059	Open in IMG/M
3300024432\|Ga0209977_10187061	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon Loki_b32	1012	Open in IMG/M
3300027742\|Ga0209121_10017492	All Organisms → cellular organisms → Bacteria	4933	Open in IMG/M
3300027852\|Ga0209345_10031692	All Organisms → cellular organisms → Bacteria	3808	Open in IMG/M
(restricted) 3300027881\|Ga0255055_10376253	Not Available	765	Open in IMG/M
3300027888\|Ga0209635_10003512	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota	12231	Open in IMG/M
3300027888\|Ga0209635_10021579	Not Available	5173	Open in IMG/M
3300027888\|Ga0209635_10033554	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	4162	Open in IMG/M
3300027888\|Ga0209635_10042420	All Organisms → cellular organisms → Archaea	3706	Open in IMG/M
3300027888\|Ga0209635_10099267	Not Available	2385	Open in IMG/M
3300027888\|Ga0209635_10278093	Not Available	1337	Open in IMG/M
3300027888\|Ga0209635_10608419	Not Available	815	Open in IMG/M
3300027888\|Ga0209635_10797328	Not Available	678	Open in IMG/M
3300027888\|Ga0209635_10864255	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota	641	Open in IMG/M
3300027893\|Ga0209636_10217189	Not Available	1743	Open in IMG/M
3300027893\|Ga0209636_10424517	Not Available	1123	Open in IMG/M
3300027901\|Ga0209427_10000514	Not Available	41086	Open in IMG/M
3300027901\|Ga0209427_10333032	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota	1199	Open in IMG/M
3300027901\|Ga0209427_10727409	Not Available	712	Open in IMG/M
3300027917\|Ga0209536_100041421	All Organisms → cellular organisms → Archaea → Asgard group	6127	Open in IMG/M
3300027917\|Ga0209536_100172536	Not Available	2723	Open in IMG/M
3300027917\|Ga0209536_100727583	Not Available	1232	Open in IMG/M
3300027917\|Ga0209536_102240322	Not Available	650	Open in IMG/M
3300031255\|Ga0315554_1010228	Not Available	4635	Open in IMG/M
3300031280\|Ga0307428_1071172	Not Available	966	Open in IMG/M
3300031337\|Ga0307430_1179690	Not Available	514	Open in IMG/M
3300031379\|Ga0307434_1129598	Not Available	703	Open in IMG/M
3300031511\|Ga0307424_1211946	Not Available	601	Open in IMG/M
3300031539\|Ga0307380_10026358	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota	6810	Open in IMG/M
3300031566\|Ga0307378_10002019	Not Available	31897	Open in IMG/M
3300031585\|Ga0315534_1014659	Not Available	4001	Open in IMG/M
3300031698\|Ga0315537_1115305	Not Available	1284	Open in IMG/M
3300032020\|Ga0315296_10373246	Not Available	786	Open in IMG/M
3300032046\|Ga0315289_10240951	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1929	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.06%
Terrestrial	Environmental → Terrestrial	1.94%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	84.47%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	6.80%
Sediment	Environmental → Aquatic → Sediment	4.85%
Freshwater	Environmental → Aquatic → Freshwater	1.94%
Soil	Environmental → Terrestrial → Soil	1.94%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	53.40%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	21.36%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	5.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.85%
Oil Seeps	Environmental → Aquatic → Marine → Oil Seeps	3.88%
Coastal	Environmental → Aquatic → Marine → Coastal	2.91%
Lake	Environmental → Aquatic → Freshwater → Lake	1.94%
Clay	Environmental → Terrestrial → Soil → Clay	1.94%
Inlet	Environmental → Aquatic → Marine → Inlet	0.97%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.97%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.97%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.97%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	53.40%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	14.56%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	6.80%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	5.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.85%
Unclassified	Environmental → Aquatic → Marine → Oil Seeps → Unclassified	3.88%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	2.91%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.94%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.97%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.97%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.97%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	0.97%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	32.04%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	21.36%
Sediment, Intertidal	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Sediment, Intertidal	8.74%
Marine Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Sediment	5.83%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	5.83%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	3.88%
Marine	Environmental → Aquatic → Marine → Oil Seeps → Unclassified → Marine	3.88%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	3.88%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	2.91%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	2.91%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.94%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	1.94%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.97%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.97%
Marine Sediment	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Sediment	0.97%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment	0.97%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001749	Oil polluted marine microbial communities from Coal Oil Point, Santa Barbara, California, USA - Sample 3	Environmental	Open in IMG/M
3300001752	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-36_30	Environmental	Open in IMG/M
3300001782	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR_deep_samples	Environmental	Open in IMG/M
3300002052	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-36_30	Environmental	Open in IMG/M
3300002053	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR_SMTZ	Environmental	Open in IMG/M
3300002180	Oil polluted marine microbial communities from Coal Oil Point, Santa Barbara, California, USA - Sample 7	Environmental	Open in IMG/M
3300003142	Marine sediment microbial communities from deep subseafloor - Sample from 5.1 mbsf	Environmental	Open in IMG/M
3300004029	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Bullhead_CordB_D2	Environmental	Open in IMG/M
3300005253	Marine sediment microbial community near Loki's castle	Environmental	Open in IMG/M
3300005346	Saline sediment microbial community from Etoliko Lagoon, Greece	Environmental	Open in IMG/M
3300005663	Marine sediment microbial community near Loki's castle	Environmental	Open in IMG/M
3300005782	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 125 cmbsf, PM3	Environmental	Open in IMG/M
3300005821	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 25 cmbsf, PM1	Environmental	Open in IMG/M
3300005832	Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.41_BBB	Environmental	Open in IMG/M
3300008516	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 125 cmbsf. Combined Assembly of MM3PM3	Environmental	Open in IMG/M
3300009034	Intertidal mud flat sediment archaeal communities from Garolim Bay, Chungcheongnam-do, Korea	Environmental	Open in IMG/M
3300009150	Deep subsurface microbial communities from South Atlantic Ocean to uncover new lineages of life (NeLLi) - Benguela_00093 metaG	Environmental	Open in IMG/M
3300009488	Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaG	Environmental	Open in IMG/M
3300009499	Deep subsurface microbial communities from Anholt, Denmark to uncover new lineages of life (NeLLi) - Anholt_01485 metaG	Environmental	Open in IMG/M
3300009788	Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00157 metaG	Environmental	Open in IMG/M
3300010413	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_9	Environmental	Open in IMG/M
3300011118	Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaG	Environmental	Open in IMG/M
3300017963	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaG	Environmental	Open in IMG/M
3300017991	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_2 metaG	Environmental	Open in IMG/M
3300018080	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaG	Environmental	Open in IMG/M
3300024263	Deep subsurface microbial communities from South Atlantic Ocean to uncover new lineages of life (NeLLi) - Benguela_00093 metaG (SPAdes)	Environmental	Open in IMG/M
3300024265	Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00157 metaG (SPAdes)	Environmental	Open in IMG/M
3300024353	Deep subsurface microbial communities from Anholt, Denmark to uncover new lineages of life (NeLLi) - Anholt_01485 metaG (SPAdes)	Environmental	Open in IMG/M
3300024432	Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaG (SPAdes)	Environmental	Open in IMG/M
3300027742	Oil polluted marine microbial communities from Coal Oil Point, Santa Barbara, California, USA - Sample 3 (SPAdes)	Environmental	Open in IMG/M
3300027852	Oil polluted marine microbial communities from Coal Oil Point, Santa Barbara, California, USA - Sample 7 (SPAdes)	Environmental	Open in IMG/M
3300027881 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_27	Environmental	Open in IMG/M
3300027888	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-30_32 (SPAdes)	Environmental	Open in IMG/M
3300027893	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-52-54 (SPAdes)	Environmental	Open in IMG/M
3300027901	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-36_30 (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300031255	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1603-70	Environmental	Open in IMG/M
3300031280	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-240	Environmental	Open in IMG/M
3300031337	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-130	Environmental	Open in IMG/M
3300031379	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-220	Environmental	Open in IMG/M
3300031511	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-20	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031566	Soil microbial communities from Risofladan, Vaasa, Finland - UN-1	Environmental	Open in IMG/M
3300031585	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-40	Environmental	Open in IMG/M
3300031698	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-70	Environmental	Open in IMG/M
3300032020	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_18	Environmental	Open in IMG/M
3300032046	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24025J20009_101115752	3300001749	Marine	MTQQHDNKLKVDIYVPLDACACVWDDFMNRMFEVLTPYMKHIDYNTKNLNSEEARKLKLHGNCVVIDGKIKFTSSYMLKDKLPNFLKEKDLM*
JGI2173J19968_100217482	3300001752	Marine Sediment	MSDMNNEENNGKLKVDIWLPLDACSCEYENFINRVFVELTPYIKYIDYDTKNLNSEEARNLNLHSKCIVVDGEKKFSSSYILKRELPKLLKAKELI*
WOR52_100195644	3300001782	Marine Sediment	MIKISDNLNLKKIKVDIYVPLDACACEWDKFMNRVFMELTPYIKYIDYDTKNLNSEEARQLNLRNNCIVVDRVKIFTSSFTLKKELPKILKEKGLI*
SMTZ1_1000123733	3300002052	Marine Sediment	MIMNKKDKEKLKVDVYVPLDACACEWDKFMNRVFMELTPYIKYINHETKNLNSDEGHQLNLHGKCVVIDGEIKISSSVMLKRELPKILKAKGLI*
SMTZ23_1000066452	3300002053	Marine Sediment	MSDLDNKLKVEIYVPLDACACEWDQFMNRIFTILTPYMKYIKYDTKNLNSDEARNLKLHGNCVLVEGNKKYTASYLLKRDLPDLLKKKGLISF*
SMTZ23_1000488916	3300002053	Marine Sediment	MDNKEDNKKLKVDIFVPLNACACEWDKFMNRIFTVLTPYIKYIKHDTKSLNSDEARELNLRSNCVVIDGEKKYTTSVSLKNDLPKLLKEKGLI*
SMTZ23_1001665414	3300002053	Marine Sediment	MKKEKDLEKIKVDIFVPLDACACEWDKFMNRVFIELTPYIKYIDHDTKNLNSEEARNLNLHNNCIVIDGEKRFSSAVALKKELPKLLKAKGLI*
SMTZ23_100248139	3300002053	Marine Sediment	MKSEELKSIFINDNKKTIESKKLQVDIYVPLDACACEWSQFMNLVFNAITPYIKHIKHETKSLNSEEAKKLNLHNKCVIVDGERKFSSSFNLKKELPKLLEAKGLI*
SMTZ23_1003202814	3300002053	Marine Sediment	MKSEELISIPIKDNKKYPKKLKVEIYVPLDACACEWSQFMNRVFAVLTPYINYIDYDTKNLNSEEARQLNLHNKSIVIDGHKKFSSSLTLKKELPKLLRAKGLI*
JGI24724J26744_101350212	3300002180	Marine	MTQQHENKLKVDIYVPLDACACVWDDFMNRMFEVLTPYMKNIDYNTKNLNSEEARKLKLHGNCVVIDRKKKFSASYLLKKELPNLLKEKNLM*
Ga0052242_10167032	3300003142	Marine Sediment	MTQQQENKLKVDIYVPLDACVCVWDDFMNRMFEVLTPYMKNIDYNTKNLNSEEARKLKLHGNCVVIDGKKKFNASYLLKKELPNLLKEKDIM*
Ga0055442_100596602	3300004029	Natural And Restored Wetlands	VIKISKEGESEKLKVDIYVPLDACACEWDKFMNRVFVELTPYIKYIDYDTKNLNSEQARQLNLRNKCIVIDGKSIFTSSFNLKKELPKLLKTKGLI*
Ga0073583_113549228	3300005253	Marine Sediment	VLEVNNEVNRKLKIDIYVPLDACTCEWDKFMNRIFMVLTPYIKHIDFETKNLNSNDARRLNIRSNCVVINGEQKIPSSVLLKKELPKLLKAKGLI*
Ga0074242_117099411	3300005346	Saline Water And Sediment	MDKSNEKLTVDIYVPLDACACEWDKFINRIFEALTPYIKHIDYDTKNLNSEEARNLNLHSKCALVDNDRIFTAPYLLKKELPNILKEKGLI*
Ga0073582_1704723	3300005663	Marine Sediment	DIYVPLDACTCEWDKFMNRIFMVLTPYIKHIDFETKNLNSNDARRLNIRSNCVVINGEQKIPSSVLLKKELPKLLKAKGLI*
Ga0079367_11518743	3300005782	Marine Sediment	VIKISDEIDSEKLKVDIYVPLDACACEWDKFMNRVFVELTPFIKHIDYDTKNLNSIEAKQLNLHNKCIVVDGKKIFSSSFTLKKELPKLLKAKGLI*
Ga0078746_10628133	3300005821	Marine Sediment	VLKISDEGDSEKLKVDIYVSLDACACEWDKFMNRVFVELTPYIKHIEYDTKNLNSKEARQLNLHNKCIIIDGEKKFSSSLNLKKELPKLLKAKGLI*
Ga0074469_110019634	3300005832	Sediment (Intertidal)	VIKISVEIKSEKLKVDIYVPLDACACEWDKFMNRVFVELTPYIKYINYDTKNLNSEEARNLNLHNNCVVIDGEKKFSSTIALKKELPNILKAKGLI*
Ga0111033_12144382	3300008516	Marine Sediment	VIKISDEPESENLKVDIYVPLDACACEWDKFMNRVFVELTPYIKYIDYDTKNLNSDEARQLNLHNNCVVIDGETKFSSSFILKKELPKLLKTKGFI*
Ga0115863_100191617	3300009034	Sediment, Intertidal	MEQNNKLRVDIYVPLDACACEWDKFMNRVFTVLTPYIKYINYDTKNLNSEEARNLNLHGNTIVVENKKKYTSSYSLKTDLPNLLREKGLI*
Ga0115863_10427588	3300009034	Sediment, Intertidal	MEENDKLKVDIYVPLDACVCEWDKFMNRVFTVLTPYIKYITYDTKNLNSEEARNLNLHGNTIIVDNKKKYTASYSLKTDLPNLLREKGLI*
Ga0115863_10624861	3300009034	Sediment, Intertidal	MEENDKLRVDIYVPLDACACEWDKFMNRVFTVLTPYIKYITYDTKNLNSEEARNLNLHGNTIVVENKKKYTSSYSLKTDLPNLLREKG
Ga0115863_10797104	3300009034	Sediment, Intertidal	VEKSNKLKVDIYVPLDSCACEWDKFMNRVFIVLTPYIKYIEHNTKNLSSEEARSLNLHGNTILVENERKYTAAFSLKRDLPTLLKEKGLI*
Ga0115863_11061824	3300009034	Sediment, Intertidal	MEQNNKLRVDIYVPLDACACEWDKFMNRVFTVLTPYIKYINYDTKNLNSEEARNLNLHGNTIVVENKKKYTSSYSLKTDLPNLLREKGX
Ga0115863_11309454	3300009034	Sediment, Intertidal	MRNEKNSEKLKVEIYVPLDACACEWDKFMNRVFVELTPYIKHIDYDTKNLNSKEARQLNLHNKCIVVDGEKKISSSFTLKKELPKLLKAKGLI*
Ga0115863_11876303	3300009034	Sediment, Intertidal	MSKEESNGKLKVDIYVPLDACACEWDKFINRVFVELTPYIKHIDYDTKNLNSVEARNLNLRNKCIIVDGEKKFSSSFILKRELPKLLKAKGLI*
Ga0115863_12010671	3300009034	Sediment, Intertidal	MEQNNKLRVDIYVPLDACACEWDKFMNRIFTVLTPYIKYINYDTKNLNSEEARNLNLHGNTIVVDNKKKYTSSYSLKTDLPNLLREKGLI*
Ga0115863_12194123	3300009034	Sediment, Intertidal	MKSEDLKSIPIKDNKNTIDSNKLQVDIYVPLDACACEWSQFMNLIFNAITPYIKHIKHETKSLNSEEAQKLNLHSKCVVVDGEKKFSSSFALKKELPKLLKAKGLI*
Ga0114921_100054893	3300009150	Deep Subsurface	MKSEELKNIPIKDNKKTIDSSKLQVDIYVPLDACVCEWSQFMNLIFNAITPYIKHIKHETKSINSDEAQKLNLHSICVIVDGEKKFSSSFTLKKELPKLLKAKGLI*
Ga0114921_100838914	3300009150	Deep Subsurface	MRKEENNGKLKVDIYVPLDACACEWDKFMNRAFIELTPYIKHIDYDSKNLNSEEARNLNIRSKCIVVDGEKKFSSSFVLKRELPKILKAKGLI*
Ga0114921_111948381	3300009150	Deep Subsurface	NGKLKVDIYVPLDACACEWDKFMNRVFVELTPYIKHIDFDTKNLNSEEAKKLNITGKCVVINGEKRFSSSFILKKELPKILRAKGLI*
Ga0114921_114215721	3300009150	Deep Subsurface	MNEEKTDGKLKVDIYVPLNACACEWDKFMNRVFEVLTQYIKHINYDTKNLNSEDARLLNLHGNCVVVDGGIKFTSSFALKKELPKILREKGFK*
Ga0114925_100300265	3300009488	Deep Subsurface	MVFGMSKEENNGKLKVDIYVPLDACTCEWDKFMNRTFIELTPYMKYIDYDTKNLNSKEVRNLNIRNKCIVIDGEKRFSSSLTLKRELPKLLKTKGLI*
Ga0114925_100361585	3300009488	Deep Subsurface	MIKGELFKMSEEETNGKLKVDIYVPLDACACEWDKFMNRVFVELTPYIKHINFDTKNLNSEEAKKLNISSKCVVINGEKKFTSSFILKKELPKILRAKGLI*
Ga0114925_100609102	3300009488	Deep Subsurface	MSKEEKNGKLKVDIYIPLDACACEWDKFMNRVFIELTPYIKHIDYDTKNLNSEEARDLNIRSKCIVVDGEKKFSSSFVLKRELPKILKAKGLI*
Ga0114925_100945062	3300009488	Deep Subsurface	MTQQHDNKLKVDIYVPLDACACIWDDFMNRMFEVLTPYMKKIDYDTKNLNSEEARKLKLHGNCVVIDGKKKFNTSYLLKKELPNLLKEKNLM*
Ga0114925_100988173	3300009488	Deep Subsurface	VIKISEDKASEKLKVDIYVPLDACACEWDKFMNRVFIELTPYIKHIEYDTKNLNSEEARQLNLHNKCIIIDGEKKFSSSLNLKKELPKLLKAKGLI*
Ga0114925_101480062	3300009488	Deep Subsurface	VIKISEDTTSEKLKVDIYVPLDACACEWDKFMNRIFIELTPYIKHIEYDTKNLNSKEARQLNLHNKCKIIDGEKKFSSSFNLKKELPKLLKAKGII*
Ga0114925_102263412	3300009488	Deep Subsurface	MTQQHDNKLKVDIYIPLDACTCVWDDFMNRMFEVLTPYMKKIDYKTKNLNSEEARKLNLHGNCVVIDGKMKFNASYLLKKELPNLLKEKNLI*
Ga0114925_103253362	3300009488	Deep Subsurface	MKSEELKSIHIKNNKKTIDSSKLQVDIYVPLDACACEWSQFMNLIFNAITPYIKHIKHETKSLNSEEAQKLNLHSNCVIVDGEKRFSSSFTLKKELPKLLKARGLI*
Ga0114925_103481112	3300009488	Deep Subsurface	MIKGELFKMSEEETNGKLKVDIYVPLDACACEWDKFMNRVFIELTPHIKHIDYDTKNLNSDEARNLNLRNKCIVVDGEKKFSSSFILKKELPKLLKAKGLI*
Ga0114925_109775502	3300009488	Deep Subsurface	VLKISDERDSEKLKVDIYVPLDACACEWDQFMNRIFVELTPYIKHIEYNTKNLNSKEARQLNLHNKCIIIDGEKKFSSSFNLKKELPNLLKAKGII*
Ga0114925_114347112	3300009488	Deep Subsurface	MSKEENNGKLKVDIYVPLDACACEWDKFMNRTFIELTPYIKHIDYDTKNLNSEEARNLNIRSQSIVVDGEKRFSSSFVLKRELPKLLKAKGLI*
Ga0114930_100121239	3300009499	Deep Subsurface	MSNEENNGKLKVDIYVPLDACACEWDKFMNRVFVELTPYIKHIDYDTKNLNSVEARNLNLHNKCIVVDGEKKFSSSITLKRELPRLLKAKGLI*
Ga0114930_103488871	3300009499	Deep Subsurface	MSNEKSNGKLKIDIYVPLDACACEWDKFMNRVFVELTPYIKHIDFDTKNLNSEEAKNLNISSKCVVVDGEKKFSSSFILKKELPKILRAKGLI*
Ga0114923_100808213	3300009788	Deep Subsurface	MRKENNRNLKVDIYVPLDACSCVWEKFMNRIFMVLTPHIKHIDHETKNLNSDEARRLNISSSCVVIDGKKKIPSSFLLEKELPKLLKAQGLI*
Ga0114923_106205052	3300009788	Deep Subsurface	LDACACEWDKYMNRIFMVLTPYIKYINHETKNINSDEGERLNIHGNCVVIDGEKKIPSSVLLKRELPKLLKAKGLI*
Ga0114923_107026782	3300009788	Deep Subsurface	YIPLDACACEWDKFMNRIFVELTPYIKYIEHNTKNLNSDEARRLNIRSKCVVIDGEKKISSSFLLKKELPKLLKAKGLI*
Ga0136851_101765441	3300010413	Mangrove Sediment	MAQQNNKLKVDIYVPLDACACEWDKFMNRVFEAITPFIKYIKYDTKNLNSDEARNLNLHGNCIVVDGQRKFTAAYLLKKELPNILREKGII*
Ga0136851_102727503	3300010413	Mangrove Sediment	MAQDNEKLKIDIYVPLDACACEWDKFMNRTFEAITPYIKYIKYDTKNLNSDEARKLNLHGNCIVIDGQIKFTATYLLKKELPDILRKKGLI*
Ga0136851_109429482	3300010413	Mangrove Sediment	MAQDDEKLKIDIYVPLDACACEWDKFMNRAFEAITPYIKYIKYDTKNLNSDEARKLNLHSNCIVVDDQIKFTATYLLKKELPNILRKKGII*
Ga0136851_111099893	3300010413	Mangrove Sediment	MENSKLKVDIYVPLDSCACEWDKFMNRVFIVLTPYIKHIDYSTKNLNSEEARNLNLHGNSIVVDNERKYTAAFLLKK
Ga0114922_112755431	3300011118	Deep Subsurface	SEKLKVDIYVPLDACACEWDKFMNRVFVELTPYIKHIDYDTKNLNSETARNLNIRNNCVVIDGEKKFSSSFTLKKELPKLLKAKGLI*
Ga0180437_1000237725	3300017963	Hypersaline Lake Sediment	MAQLNNKLKVDIYVPLDACACEWDKFMNRVFEAITPFIKYIKYDTKNLNSDEARNLNLHGNCIVVDGQRKFTAAYLLKKELPNILREKGII
Ga0180437_100158408	3300017963	Hypersaline Lake Sediment	MEQSDNKLKIDIYVPLDACACEWDKFMNRIFEIMTPYLKYIDYDTKNLNSDEARNLNLHEKCLVIDEQIIITASYLLKKELPNLLKEKGFI
Ga0180437_100310446	3300017963	Hypersaline Lake Sediment	MDQTNEKLKIDIYVPLDACACEWDKFINRIFETLTPYLKFIDYNTKNLNSEEARNLNLHGKCVVIEGKKVFSASYLLKKEITNILKEKGLI
Ga0180434_108811201	3300017991	Hypersaline Lake Sediment	MDHSTSKLKMDIYVPLDACPCEWDKFMNRIFQVITPYMKYIDYDTKNLNSDEARNLNLHNKCIVIDRRIIITASYLLKKELQNLLKEKGFI
Ga0180433_1000311714	3300018080	Hypersaline Lake Sediment	MEQSDNKLKIDIYVPLDACACEWDKFMNRIFEIMTPYLKYIDYDTKNLNSDEARNLNLHGKCLVIDEQIIITASYLLKKELPNLLKEKGFI
Ga0180433_100963792	3300018080	Hypersaline Lake Sediment	MDHSTSKLKMDIYVPLDACPCEWDKFMNRIFQVITPYLKYIDYDTKNLNSDEARNLNLHNKCIVIDRRIIITASYLLKKELQNLLKEKGFI
Ga0209978_100078996	3300024263	Deep Subsurface	MKSEELKNIPIKDNKKTIDSSKLQVDIYVPLDACVCEWSQFMNLIFNAITPYIKHIKHETKSINSDEAQKLNLHSICVIVDGEKKFSSSFTLKKELPKLLKAKGLI
Ga0209976_100116213	3300024265	Deep Subsurface	MSKEDNGKLNVDIFVPLDACACEWDKFMNRIFMVLTPYIKYINHETKNINSDEARRLNIRGNCVVIDGEKRISSSVLLKRELPKILKAKGLI
Ga0209976_107616682	3300024265	Deep Subsurface	MGEEETNGKLKVDIYVPLDACACEWDKFMNRVFIELTPHIKHIDYDTKNLNSDEARNLNLRNKCIVVDGEKKFSSSFILK
Ga0209979_10109198	3300024353	Deep Subsurface	MSNEENNGKLKVDIYVPLDACACEWDKFMNRVFVELTPYIKHIDYDTKNLNSVEARNLNLHNKCIVVDGEKKFSSSITLKRELPRLLKAKGLI
Ga0209977_1000036117	3300024432	Deep Subsurface	MSKEENNGKLKVDIYVPLDACTCEWDKFMNRTFIELTPYMKYIDYDTKNLNSKEARNLNIRNKCIVIDGEKKFSSSLTLKRELPKLLKTKGLI
Ga0209977_1000112811	3300024432	Deep Subsurface	MTQQHDNKLKVDIYIPLDACTCVWDDFMNRMFEVLTPYMKKIDYKTKNLNSEEARKLNLHGNCVVIDGKMKFNASYLLKKELPNLLKEKNLI
Ga0209977_100012562	3300024432	Deep Subsurface	MTQQHDNKLKVDIYVPLDACACIWDDFMNRMFEVLTPYMKKIDYDTKNLNSEEARKLKLHGNCVVIDGKKKFNTSYLLKKELPNLLKEKNLM
Ga0209977_100045471	3300024432	Deep Subsurface	DIYVPLDACACEWSQFMNLIFNAITPYIKHIKHETKSLNSEEAQKLNLHSNCVIVDGEKRFSSSFTLKKELPKLLKARGLI
Ga0209977_100284223	3300024432	Deep Subsurface	VIKISEDKASEKLKVDIYVPLDACACEWDKFMNRVFIELTPYIKHIEYDTKNLNSEEARQLNLHNKCIIIDGEKKFSSSLNLKKELPKLLKAKGLI
Ga0209977_100475492	3300024432	Deep Subsurface	VIKISEDTTSEKLKVDIYVPLDACACEWDKFMNRIFIELTPYIKHIEYDTKNLNSKEARQLNLHNKCKIIDGEKKFSSSFNLKKELPKLLKAKGII
Ga0209977_101722153	3300024432	Deep Subsurface	MIKGELFKMSEEETNGKLKVDIYVPLDACACEWDKFMNRVFVELTPYIKHINFDTKNLNSEEAKKLNISSKCVVINGENKFSSSFILKKELPKILRAKGLI
Ga0209977_101870612	3300024432	Deep Subsurface	VLKISDERDSEKLKVDIYVPLDACACEWDQFMNRIFVELTPYIKHIEYDTKNLNSKEARQLNLNNKCIIIDGEKKFSSSFNLKKELPNLLKAKGII
Ga0209121_100174925	3300027742	Marine	MTQQHDNKLKVDIYVPLDACACVWDDFMNRMFEVLTPYMKHIDYNTKNLNSEEARKLKLHGNCVVIDGKIKFTSSYMLKDKLPNFLKEKDLM
Ga0209345_100316924	3300027852	Marine	MTQQHENKLKVDIYVPLDACACVWDDFMNRMFEVLTPYMKNIDYNTKNLNSEEARKLKLHGNCVVIDRKKKFSASYLLKKELPNLLKEKNLM
(restricted) Ga0255055_103762531	3300027881	Seawater	VDIYVPLDACTCEWDKFMNRAFIELTPYIKNIDYDTKNLNSEEARNLNIQSKCIVVDGEKKFSSSFVLKRELPKILKTKGLI
Ga0209635_100035125	3300027888	Marine Sediment	MEQNNKLRVDIYVPLDACACEWDKFMNRIFTVLTPYIKYINYDTKNLNSEEARNLNLHGNTIVVDNKKKYTSSYSLKTDLPNLLREKGLI
Ga0209635_100215798	3300027888	Marine Sediment	MKSEELISIPIKDNKKYPKKLKVEIYVPLDACACEWSQFMNRVFAVLTPYINYIDYDTKNLNSEEARQLNLHNKSIVIDGHKKFSSSLTLKKELPKLLRAKGLI
Ga0209635_100335543	3300027888	Marine Sediment	MIKISDNLNLKKIKVDIYVPLDACACEWDKFMNRVFMELTPYIKYIDYDTKNLNSEEARQLNLRNNCIVVDRVKIFTSSFTLKKELPKILKEKGLI
Ga0209635_100424204	3300027888	Marine Sediment	MKSEELKSIFINDNKKTIESKKLQVDIYVPLDACACEWSQFMNLVFNAITPYIKHIKHETKSLNSEEAKKLNLHNKCVIVDGERKFSSSFNLKKELPKLLEAKGLI
Ga0209635_100992674	3300027888	Marine Sediment	MSDMNNEENNVKLKVDIWLPLDACSCEYENFINRVFVELTPYIKYIDYDTKNLNSEEARNLNLHSKCIVVDGEKKFSSSYILKRELPKLLKAKELI
Ga0209635_102780932	3300027888	Marine Sediment	MIMNKKDKEKLKVDVYVPLDACACEWDKFMNRVFMELTPYIKYINHETKNLNSDEGHQLNLHGKCVVIDGEIKISSSVMLKRELPKILKAKGLI
Ga0209635_106084192	3300027888	Marine Sediment	VITIKEPEKLNVDIYVPMDACACEWDKFMNRVFVELTPYIKHIDYDTKNLNSKEARELNIRGKCIVVDGEKRFSSSFILKRELPKLLKAKGLI
Ga0209635_107973281	3300027888	Marine Sediment	LKVDNYMPLDVCACEWDKFINRVFIELTPYIKHIDYDTKNLNSEEVRKLNLHDKCVILDGELKVSSSFTLKKELPKLLKAKGLI
Ga0209635_108642552	3300027888	Marine Sediment	VPLNACACEWDKFMNRIFTVLTPYIKYIKHDTKSLNSDEARELNLRSNCVVIDGEKKYTTSVSLKNDLPKLLKEKGLI
Ga0209636_102171894	3300027893	Marine Sediment	MEQNNKLRVDIYVPLDACACEWDKFMNRIFTVLTPYIKYINYNTKNLNSEEARNLNLHGNTIVVDNNKKYTSSYSLKTDLPNLLREKGLI
Ga0209636_104245172	3300027893	Marine Sediment	MKSQELKSISIKDNKNTIDPKKLKVDIYVPLDACACEWSQFMNRVFTVLTPYIKHINYDTKNLNSEEARQLNLHNISIVIDEQKKFSSSFTLKKELPKLLKTKGLI
Ga0209427_1000051436	3300027901	Marine Sediment	MSDMNNEENNGKLKVDIWLPLDACSCEYENFINRVFVELTPYIKYIDYDTKNLNSEEARNLNLHSKCIVVDGEKKFSSSYILKRELPKLLKAKELI
Ga0209427_103330322	3300027901	Marine Sediment	VVMIKEETNSKKLKVDIYVPLDACACEWDKYMNRVFVELTPYIKHIDYDTKNLNSEEARNLNLHNKCIVVDGEKKYSSTIALKKELPRLLKAKGLI
Ga0209427_107274092	3300027901	Marine Sediment	MDNKEDNKKLKVDIFVPLNACACEWDKFMNRIFTVLTPYIKYIKHDTKSLNSDEARELNLRSNCVVIDGEKKYTTSVSLKNDLPKLLKEKGLI
Ga0209536_1000414213	3300027917	Marine Sediment	MSKEETNGKLKVDIYVPLDACACEWDKFMNRVFVELTPYIKHIDFDTKNLNSEEAKALNISSKCVVINGERRFSSSFILKKELPKILRAKGLI
Ga0209536_1001725363	3300027917	Marine Sediment	LNAEENNGKLKVDIYVPLDACACEWDKFMNRVFAELTPYIKYIDYDTKNLNSLEARNLKLHNKCIVVDGEKKFSSSFTLKKELPKLLKAKGLI
Ga0209536_1007275833	3300027917	Marine Sediment	MSDIQENGKLKVDIYVPLDACACEWDKFVNRVFIELTPYIKYIDYDTKNLNSEEARNLNLRSKCIVVDRQKKFSSAFTLKRELPKLLHQKGLI
Ga0209536_1022403222	3300027917	Marine Sediment	MSNEEQNGKLKVEIYVPLDACACEWDKFMNRVFTEITPYIKHIDYETKNLNSDEARKLNIRSKCIVVDGEKKYSSSFVLKRELPKLLKAKGLI
Ga0315554_10102285	3300031255	Salt Marsh Sediment	LGVIKISEENSEKLKVDIYVPLDACACEWDKFMNRVFVELTPYIKYIDYDTKNLNSEEARELNLYNKCVVVDGQKKFSSSFTLKKELPNLLKAKGLI
Ga0307428_10711722	3300031280	Salt Marsh	VIKINNKPESEKLKVDIYVPLDACACEWDKFMNRVFVELTPYIKHIDYDTKNLNSDEARQLNLHNNCVVIEREIKFFSSFTLKKELPKLLKAKGLI
Ga0307430_11796901	3300031337	Salt Marsh	VIKISEENSEKLKVDIYVPLDACACEWDKFMNRVFVELTPYIKYIDYDTKNLNSEEARELNLYNKCVVVDGQKKFSSSFTLKKELPNLLKAKGLI
Ga0307434_11295981	3300031379	Salt Marsh	KINNKPEFEKLKVDIYVPLDACACEWDKFMNRVFVELTPYIKYIDYDTKNLNSEEARELNLYNKCVVVDGQKKFSSSFTLKKELPNLLKAKGLI
Ga0307424_12119461	3300031511	Salt Marsh	YVPLDACACEWDKFMNRVFVELTPYIKYIDYDTKNLNSEEARELNLYNKCVVVDGQKKFSSSFTLKKELPNLLKAKGLI
Ga0307380_1002635811	3300031539	Soil	VIKISDEKDSEKLKVDIYVPLDACACEWDKFMNRVFVELTPYIKYIDYDTKNLNSEEARNLNLHNKCVVIDGENKFSSTIALKKELPNILKAKGLI
Ga0307378_1000201929	3300031566	Soil	VIKISDEKDSEKLKVDIYVPLDACACEWDKFMNRVFVELTPYIKYIDYDTKNLNSEEARNLNLHNKCVVIDRENKFSSTIALKKELPNILKAKGLI
Ga0315534_10146594	3300031585	Salt Marsh Sediment	VIKISDNNALEKLKVDIYVPLDACACEWDKFMNRVFVELTPYMKHIDYNTKNLNSEEARKLNLRNNCVVIDGEKKFASSFTLKKELARLLKNKGLI
Ga0315537_11153052	3300031698	Salt Marsh Sediment	LGVIKISEENSEKLKVDIYVPLDACACEWDKFMNRVFVELTPYIKYIDYDTKNLNSEEARELNLYNKCVVVDGQKKFSSSFTLKKELP
Ga0315296_103732462	3300032020	Sediment	LSEQKSIKANKLKVDIYVPLDACSCVWDHFMNQVFAVLTPYIKYINQDTKNSNSEEARKLKIIGSCVVVDGKKIFNSSQALEQQLPDLLKEKGLI
Ga0315289_102409513	3300032046	Sediment	LSDPKSPKANKLKVDIYVPLDACSCVWDHFMNQVFAVLTPYIKYINQDTKNSNSEEARKLKIIGSCVVVDGKKIFNSSQTLEQQLPGLLKEKGMIS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters