NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F098521

Metagenome / Metatranscriptome Family F098521

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Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F098521
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 44 residues
Representative Sequence LYFERFDVFFEKYKICQKSDKYWIDLESLKLKGPQVGIIFTNG
Number of Associated Samples 79
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.97 %
% of genes near scaffold ends (potentially truncated) 84.47 %
% of genes from short scaffolds (< 2000 bps) 99.03 %
Associated GOLD sequencing projects 77
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (96.117 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere
(39.806 % of family members)
Environment Ontology (ENVO) Unclassified
(70.874 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant surface
(64.078 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 2.33%    β-sheet: 58.14%    Coil/Unstructured: 39.53%
Feature Viewer
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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A96.12 %
All OrganismsrootAll Organisms3.88 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005330|Ga0070690_100146226Not Available1608Open in IMG/M
3300005335|Ga0070666_10735561Not Available724Open in IMG/M
3300005335|Ga0070666_10896438Not Available655Open in IMG/M
3300005340|Ga0070689_100509557Not Available1032Open in IMG/M
3300005355|Ga0070671_101299244Not Available642Open in IMG/M
3300005355|Ga0070671_102048967Not Available509Open in IMG/M
3300005440|Ga0070705_100408360Not Available1007Open in IMG/M
3300005467|Ga0070706_100141429Not Available2246Open in IMG/M
3300005468|Ga0070707_101201134Not Available724Open in IMG/M
3300005618|Ga0068864_100181155Not Available1926Open in IMG/M
3300005719|Ga0068861_101240510Not Available722Open in IMG/M
3300005719|Ga0068861_102463743Not Available523Open in IMG/M
3300005841|Ga0068863_101759479Not Available629Open in IMG/M
3300005841|Ga0068863_102082569Not Available577Open in IMG/M
3300005842|Ga0068858_100866435Not Available882Open in IMG/M
3300005843|Ga0068860_101151536Not Available795Open in IMG/M
3300005843|Ga0068860_101238985Not Available766Open in IMG/M
3300005844|Ga0068862_100650708Not Available1016Open in IMG/M
3300009177|Ga0105248_10845438Not Available1033Open in IMG/M
3300009553|Ga0105249_11990246Not Available654Open in IMG/M
3300010371|Ga0134125_11167814Not Available842Open in IMG/M
3300010396|Ga0134126_13043972Not Available506Open in IMG/M
3300010397|Ga0134124_10851938Not Available914Open in IMG/M
3300010397|Ga0134124_11518994Not Available698Open in IMG/M
3300014326|Ga0157380_11548948Not Available717Open in IMG/M
3300014486|Ga0182004_10169987Not Available787Open in IMG/M
3300014486|Ga0182004_10294055Not Available510Open in IMG/M
3300015270|Ga0182183_1019468Not Available813Open in IMG/M
3300015278|Ga0182099_1051092Not Available560Open in IMG/M
3300015280|Ga0182100_1084416Not Available534Open in IMG/M
3300015297|Ga0182104_1050547Not Available683Open in IMG/M
3300015301|Ga0182184_1046017Not Available658Open in IMG/M
3300015301|Ga0182184_1078523Not Available549Open in IMG/M
3300015306|Ga0182180_1069032Not Available564Open in IMG/M
3300015310|Ga0182162_1056194Not Available683Open in IMG/M
3300015310|Ga0182162_1131833Not Available500Open in IMG/M
3300015311|Ga0182182_1076794Not Available596Open in IMG/M
3300015313|Ga0182164_1096989Not Available577Open in IMG/M
3300015318|Ga0182181_1093681Not Available542Open in IMG/M
3300015320|Ga0182165_1088299Not Available616Open in IMG/M
3300015326|Ga0182166_1034012Not Available841Open in IMG/M
3300015326|Ga0182166_1119817Not Available542Open in IMG/M
3300015328|Ga0182153_1094526Not Available608Open in IMG/M
3300015329|Ga0182135_1156697Not Available500Open in IMG/M
3300015334|Ga0182132_1146664Not Available535Open in IMG/M
3300015335|Ga0182116_1068102Not Available754Open in IMG/M
3300015335|Ga0182116_1112496Not Available617Open in IMG/M
3300015338|Ga0182137_1107445Not Available628Open in IMG/M
3300015348|Ga0182115_1207542Not Available627Open in IMG/M
3300015349|Ga0182185_1203416Not Available599Open in IMG/M
3300015349|Ga0182185_1269570Not Available519Open in IMG/M
3300015350|Ga0182163_1261191Not Available542Open in IMG/M
3300015350|Ga0182163_1294917Not Available507Open in IMG/M
3300017408|Ga0182197_1129842Not Available534Open in IMG/M
3300017408|Ga0182197_1143974Not Available513Open in IMG/M
3300017411|Ga0182208_1072432Not Available604Open in IMG/M
3300017432|Ga0182196_1036185Not Available827Open in IMG/M
3300017432|Ga0182196_1106976Not Available575Open in IMG/M
3300017435|Ga0182194_1009904Not Available1376Open in IMG/M
3300017435|Ga0182194_1110280Not Available571Open in IMG/M
3300017440|Ga0182214_1122734Not Available565Open in IMG/M
3300017682|Ga0182229_1092032Not Available533Open in IMG/M
3300017692|Ga0182210_1116977Not Available581Open in IMG/M
3300020031|Ga0182119_105410Not Available552Open in IMG/M
3300020033|Ga0182146_102499Not Available679Open in IMG/M
3300025711|Ga0207696_1038158Not Available1419Open in IMG/M
3300025900|Ga0207710_10478664Not Available645Open in IMG/M
3300025903|Ga0207680_10724920Not Available713Open in IMG/M
3300025923|Ga0207681_10250682Not Available1382Open in IMG/M
3300026095|Ga0207676_11656395Not Available638Open in IMG/M
3300028049|Ga0268322_1050104Not Available525Open in IMG/M
3300028055|Ga0268338_1038008Not Available530Open in IMG/M
3300028058|Ga0268332_1067496Not Available534Open in IMG/M
3300028140|Ga0268334_1013369Not Available569Open in IMG/M
3300028141|Ga0268326_1000487Not Available1374Open in IMG/M
3300028141|Ga0268326_1001754Not Available918Open in IMG/M
3300028141|Ga0268326_1006157Not Available644Open in IMG/M
3300028141|Ga0268326_1006529Not Available632Open in IMG/M
3300028142|Ga0268347_1000352All Organisms → Viruses → Predicted Viral1951Open in IMG/M
3300028142|Ga0268347_1022642Not Available576Open in IMG/M
3300028143|Ga0268348_1015899Not Available587Open in IMG/M
3300028149|Ga0268353_111446Not Available643Open in IMG/M
3300028150|Ga0268343_1009816Not Available639Open in IMG/M
3300028152|Ga0268336_1007262Not Available775Open in IMG/M
3300028246|Ga0268351_1009969Not Available902Open in IMG/M
3300028251|Ga0268324_1025969Not Available505Open in IMG/M
3300028253|Ga0268316_1003256Not Available903Open in IMG/M
3300028262|Ga0268310_1037723Not Available563Open in IMG/M
3300028466|Ga0268321_107136Not Available579Open in IMG/M
3300028467|Ga0268333_1001110All Organisms → Viruses → Predicted Viral1049Open in IMG/M
3300028468|Ga0268317_1004101Not Available703Open in IMG/M
3300028468|Ga0268317_1008294Not Available577Open in IMG/M
3300028472|Ga0268315_1007844Not Available738Open in IMG/M
3300028472|Ga0268315_1026641Not Available510Open in IMG/M
3300028475|Ga0268327_1005345Not Available804Open in IMG/M
3300028475|Ga0268327_1006893Not Available752Open in IMG/M
3300028525|Ga0268305_100995All Organisms → Viruses → Predicted Viral1109Open in IMG/M
3300028529|Ga0268311_1004651Not Available883Open in IMG/M
3300032697|Ga0214499_1057371All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum1154Open in IMG/M
3300032697|Ga0214499_1134244Not Available765Open in IMG/M
3300032781|Ga0314742_1078550Not Available561Open in IMG/M
3300032915|Ga0314749_1143902Not Available505Open in IMG/M
3300032934|Ga0314741_1086635Not Available726Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere39.81%
PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere27.18%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere9.71%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere5.83%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.88%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere3.88%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.91%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.94%
RootHost-Associated → Plants → Roots → Unclassified → Unclassified → Root1.94%
Miscanthus PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere1.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.97%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014486Endophyte microbial communities from Sorghum bicolor roots, Mead, Nebraska, USA - 072115-40_1 MetaGHost-AssociatedOpen in IMG/M
3300015270Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015278Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015280Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015297Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015301Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015306Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015310Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015311Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015313Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015318Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015320Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015326Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015328Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015329Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015334Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015335Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015338Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015348Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015349Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015350Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017408Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017411Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017432Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017435Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017440Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017682Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017692Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300020031Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_31MAY2016_LD2 MGHost-AssociatedOpen in IMG/M
3300020033Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_12JUL2016_LD2 MGHost-AssociatedOpen in IMG/M
3300025711Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028049Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_26JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028055Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028058Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028140Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028141Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_17JUL2017_LD1Host-AssociatedOpen in IMG/M
3300028142Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_28AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028143Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_18SEP2017_LD1Host-AssociatedOpen in IMG/M
3300028149Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_18SEP2017_LD1Host-AssociatedOpen in IMG/M
3300028150Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_28AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028152Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028246Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_18SEP2017_LD1Host-AssociatedOpen in IMG/M
3300028251Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_17JUL2017_LD1Host-AssociatedOpen in IMG/M
3300028253Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_26JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028262Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_05JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028466Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_26JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028467Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028468Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_26JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028472Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_05JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028475Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_17JUL2017_LD1Host-AssociatedOpen in IMG/M
3300028525Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_15MAY2017_LD1Host-AssociatedOpen in IMG/M
3300028529Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_05JUN2017_LD1Host-AssociatedOpen in IMG/M
3300032697Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_12SEP2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032781Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_17JUL2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032915Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_07AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032934Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_17JUL2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0070690_10014622643300005330Switchgrass RhizosphereMYFERFDVFFEKYKICQKSDKCWIDLESLKLKGPQVGIIVTSG*
Ga0070666_1073556113300005335Switchgrass RhizosphereMYVERFDVFFEKYKIYQKSDKCWIDLESLKLKGPQVGIIVTS
Ga0070666_1089643823300005335Switchgrass RhizosphereKISWQFNLYFERFDVFFEKYKICQKSDKYWIDLESLKLKGPQVGIIFTNS*
Ga0070689_10050955723300005340Switchgrass RhizosphereLYFERFDVFFEKYKICQKSDKYWIDLKSLKLKGPQVGIIFTSG*
Ga0070671_10129924423300005355Switchgrass RhizosphereYFERFDVFFEKYKICQKSDKYWIDLKSLKLKGPQVGIIFTNG*
Ga0070671_10204896713300005355Switchgrass RhizosphereNMYFERFDVFFEKYKICQKSDKYWIDLESLKLKGPQVEIIFTSG*
Ga0070705_10040836013300005440Corn, Switchgrass And Miscanthus RhizosphereLYFERFDVFFEKYKICQKSDKYWIDLESLKLKGPQVEIIFTSG*
Ga0070706_10014142933300005467Corn, Switchgrass And Miscanthus RhizosphereMYFERFDVFFEKYKICQKSDKYWIDLESLKLKGPQVGIIFTNG*
Ga0070707_10120113423300005468Corn, Switchgrass And Miscanthus RhizosphereLYFERFDVFFEKYKICQKSDKYWIDLESLKLKGPQVGIIVTSG*
Ga0068864_10018115533300005618Switchgrass RhizosphereLYFERFDVFFEKYKICQKSDKYWIDLKSLKLKGPQVGIIFTNG*
Ga0068861_10124051023300005719Switchgrass RhizosphereFERFDVFFEKYKICQKSDKYWIDLKSLKLKGPQVGIIFTNG*
Ga0068861_10246374323300005719Switchgrass RhizosphereFNMYFERFDVFFEKYKICQKSDKCWIDLESLKLKGPQVGIIVTSG*
Ga0068863_10175947913300005841Switchgrass RhizosphereLYFERFDVFFEKYKICQKSDKYWIDLESLKLKGPQVGIILTNG*
Ga0068863_10208256913300005841Switchgrass RhizosphereERFDVFFEKYKICQKSDKCWIDLESLKLKCPQVGIIVTSG*
Ga0068858_10086643513300005842Switchgrass RhizosphereLYYERFDVFFEKYKICQKSDKYWIDLESLKLKGPQVEIIFTSG*
Ga0068860_10115153623300005843Switchgrass RhizosphereLYFERFDIFFERYKICQKSDKYWIDLESLKLKGPQVEIIVTSG*
Ga0068860_10123898513300005843Switchgrass RhizosphereHKISWQFNLYFERFDVFFEKYKICQKSDKYWIDLKSLKLKGPQVGIIFTNG*
Ga0068862_10065070813300005844Switchgrass RhizosphereRFDVFFEKYKICQKSDKYWIDLESLKLKGPQVGIIFTSG*
Ga0105248_1084543813300009177Switchgrass RhizosphereMYFERFDVFFEKYKICQKSDKYWIDLESLKLKGPQVEIIFTSG*
Ga0105249_1199024623300009553Switchgrass RhizosphereDVFFEKYKICQKSDKYWIDLKSLKLNIPEVGIILTNG*
Ga0134125_1116781413300010371Terrestrial SoilFNLYFERFDVFFEKYKICQKSDKYWIDLESLKLKGHQVEIISTSG*
Ga0134126_1304397213300010396Terrestrial SoilFNLYFERFDVFFEKYKICQKSDKYWIDLKSLKLKGPQVGIIFTNG*
Ga0134124_1085193823300010397Terrestrial SoilDVFFEKYKICQKSDKYWIDLESLKLKGPQVEIIVTSG*
Ga0134124_1151899413300010397Terrestrial SoilKILWQFNLYSKRYDIFFERYKICQKSDKYWIDLESLKLKGTQVEIIFTIG*
Ga0157380_1154894813300014326Switchgrass RhizosphereKGLEAQIFMAAKCLSVTHLHKILWQFNLCSKRYDIFFERYKICQKSDKYWIELKSLKLKGPQVEIIFTSG*
Ga0182004_1016998713300014486RootMLWYLALYIVRYGYLFKGYRICQKSDNYWIDLESLQLKGPQV
Ga0182004_1029405523300014486RootLDLYIVRYGYFFKGYRICQKSDKYWIDLESLKLKGPQVGNMFISV*
Ga0182183_101946823300015270Switchgrass PhyllosphereVFFEKYKICQKSDKYWIDLKSLKLKGPQVGIIFTNG*
Ga0182099_105109213300015278Switchgrass PhyllosphereFDVFFEKYKICQKSDKYWIDLESLKLKGPQVEIIVTSG*
Ga0182100_108441623300015280Switchgrass PhyllosphereERFDVFFEKYKICQKSDKYWIDLESLKLKGPQVGIILTNG*
Ga0182104_105054713300015297Switchgrass PhyllosphereFDVFFEKYKICQKSDKCWIDLESLKLKGPQVGIIFTSG*
Ga0182184_104601713300015301Switchgrass PhyllosphereSKRYDIFFERYKICQKSDKYWIDLESLKLKGHQVEIIFTSG*
Ga0182184_107852313300015301Switchgrass PhyllosphereWQFNLYFERFDVFFEKYKICQKSDKYWIDLKSLKLKGPQVGIIFTNG*
Ga0182180_106903213300015306Switchgrass PhyllosphereDVFFEKYKICQKSDKYWIDLESLKLKGPQVGIILTNG*
Ga0182162_105619423300015310Switchgrass PhyllosphereFNLYFERFDVFFEKYKICQKSDKYWIDLESLKLKGPQVGIILTNG*
Ga0182162_113183313300015310Switchgrass PhyllosphereLSVTHLHKISWQFNLYFERFDVLFEKYKICQKSDKYWIDLKSLKLKGPQVEIIFTSG*
Ga0182182_107679423300015311Switchgrass PhyllosphereYFERFDVFFEKYKICQKSDKYWIDLESLKLKGPQVGIIIISG*
Ga0182164_109698923300015313Switchgrass PhyllosphereDVFFEKYKICQKSDKYWIDLKSLKLKGPQVGIIFTNG*GT*
Ga0182181_109368113300015318Switchgrass PhyllosphereLHKISWQFNLYFERFDVFFEKYKICQKSDKYWIDLESLKLKGPQVGIIFTSG*
Ga0182165_108829913300015320Switchgrass PhyllosphereFERYKICQKSDKYWIDLESLKLKGPQVEIIVTSG*
Ga0182166_103401213300015326Switchgrass PhyllosphereTHLHKISWQFNLNFERFDVFFEEYKICQKSDKYWIDLKSLKLKGPQVGIIFING*
Ga0182166_111981713300015326Switchgrass PhyllosphereMYFERFDVFFEKYKICQKSDKCWIDLESLKLKGPQVGIIVTSGCGT*
Ga0182153_109452613300015328Switchgrass PhyllosphereMYFERFDVFFEKYKIYQKSDKYWIDLESLKLKGPQVGIILTNG*
Ga0182135_115669713300015329Switchgrass PhyllosphereFFEKYKICQKSDKCWIDLESLKLKGPQVGIIITSG*
Ga0182132_114666413300015334Switchgrass PhyllosphereSNMYFERFDVFFEKYKICQKNDKYWIDLESLKLKGPQVGIILTNG*
Ga0182116_106810213300015335Switchgrass PhyllosphereDVFFEKYKICQKSDKYWIDLKSLKLKGPQVEIIVTSD*
Ga0182116_111249613300015335Switchgrass PhyllosphereFDVFFEKYKICQKSDKCWIDLESLKLKGPQVGIIITSG*
Ga0182137_110744513300015338Switchgrass PhyllosphereHLHKISWQFNLYFERFDVFFEKYKICQKSDKYWIDLESLKLKGPQVGIILTNG*
Ga0182115_120754223300015348Switchgrass PhyllosphereFNMYFERFDVFFEKYKICQKSDKCWIDLESLKLKGPQVGIIITSG*
Ga0182185_120341613300015349Switchgrass PhyllosphereFEKYKICQKSDKYWIDLESLKLKGPQVGIIVTSG*
Ga0182185_126957013300015349Switchgrass PhyllosphereMYVERFDVFFEKYKIYQKSDKCWIDLESLKLKGPQVGIIVTSG*
Ga0182163_126119113300015350Switchgrass PhyllosphereFDVFFEKYKICQKSDKYWIDLESLKLKGPQVGIILTNG*
Ga0182163_129491713300015350Switchgrass PhyllosphereLYFERFDVFFEKYKICQKSDKYWIDLESLKLIGPQVGIILING*
Ga0182197_112984213300017408Switchgrass PhyllosphereFDVFFEKYKICQKSDKYWIDLESLKLKGPQVGIILTNG
Ga0182197_114397423300017408Switchgrass PhyllosphereKISWQFNLYFERFGIFFERYKICQKSDKYWIDLEPLKLKGPQVGIIFTNG
Ga0182208_107243213300017411Miscanthus PhyllosphereAHLHQILWYLDLYFGRYAYFFEKYKICQKSDKCWIDLESLXLKGPQVENMFISNXGT
Ga0182196_103618523300017432Switchgrass PhyllosphereFDVFFEKYKICQKSDKYWIDLESLKLKGPQVGIIFTSG
Ga0182196_110697613300017432Switchgrass PhyllosphereDVFFEKYKICQKSDKYWIDLESLKLKGPQVGIILTNG
Ga0182194_100990413300017435Switchgrass PhyllosphereLYFERFDVFFEKYKICQKSDKYWIDLESLKLKGPQV
Ga0182194_111028013300017435Switchgrass PhyllosphereNLYFERFDVFFEKYKICQKSDKYWIDLESLKLKGSQVGIILTNG
Ga0182214_112273413300017440Switchgrass PhyllosphereERFDVFFEKYKICQKSDKYWIDLESLKLKGPQVGIILTNG
Ga0182229_109203223300017682Miscanthus PhyllosphereYLDLYFDRYAFFFEEYKICQKSDKCWIDLESLGLKGSQVGIMFISD
Ga0182210_111697713300017692Switchgrass PhyllosphereLYSKRYDIFFERYKICQKSDKYWIDLESLKLKGPQVEIIFNKWLRNLG
Ga0182119_10541013300020031Switchgrass PhyllosphereFFEKYKICQKSDKYWIDLESLKLKGPQVGIIFTSG
Ga0182146_10249913300020033Switchgrass PhyllosphereSKRYDIFFERYKIYQKSDKYWIDLESLKLKGPQVEIIFTSG
Ga0207696_103815813300025711Switchgrass RhizosphereMYFERFDVFFEKYKICQKSDKYWIDLESLKLKGPQVGIIFTSG
Ga0207710_1047866413300025900Switchgrass RhizosphereMYFERFDVFFEKYKICQKSDKYWIDLESLKLKGPQIEIIVTSG
Ga0207680_1072492023300025903Switchgrass RhizosphereFDVFFEKYKIWQKSDKYWIDLESLKLKGSQVGIIFTNG
Ga0207681_1025068213300025923Switchgrass RhizosphereMYFERFDVFFEKYKICQKSDKCWIDLESLKLKGPQVGIIV
Ga0207676_1165639513300026095Switchgrass RhizosphereSWQFNLYFERFDVFFEKYKICQKSDKYWIDLKSLKLKGPQVGIIFTNG
Ga0268322_105010413300028049PhyllosphereVFFEKYKICQKSDKYWIDLKSLKLKGPQVGIIFTNG
Ga0268338_103800813300028055PhyllosphereFFERYKVCQKSDKYWIDLESLKLKGPQVEIIFTSG
Ga0268332_106749623300028058PhyllosphereRFDVFFEKYKICQKSDKCWIDLESLKLKGPQVGIIVTSG
Ga0268334_101336913300028140PhyllosphereQFNLYFERFDVFFEKYKICQKSDKYWIDLESLKLKGPQVGIIFTSG
Ga0268326_100048723300028141PhyllosphereMYFERFDVFFEKYKICQKSDKCWIDLESLKLKGPQVGII
Ga0268326_100175423300028141PhyllosphereMYFERFDVFFEKYKICQKSDKYWIDLESLKLKGPQVGIIVTSG
Ga0268326_100615713300028141PhyllosphereLYFERFDVFFEKYKICQKSDKYWIDLESLKLKGPQVGIIFTNG
Ga0268326_100652913300028141PhyllosphereYFERFDVFFEKYKICQKSDKCWIDLESLKLKGPQVGIIITSG
Ga0268347_100035213300028142PhyllosphereRFDVFFEKYKICQKSDKYWIDLESLKLKGPQVEIIFTSG
Ga0268347_102264213300028142PhyllosphereFFEKYKICQKSDKYWIDLESLKLKGPQVGIIVTSD
Ga0268348_101589913300028143PhyllosphereDVFFEKYKICQKSDKYWIDLESLKLKGPQVGIIFTNG
Ga0268353_11144613300028149PhyllosphereHKILWQFNLYFERFDVFFEKYKICQKSDKYWIDLESLKLKGPQVGIILTNG
Ga0268343_100981613300028150PhyllosphereKILWQFNLYFERFDVFFEKYKICQKSDKYWIDLKSLKLKGPQVGIIFTNG
Ga0268336_100726213300028152PhyllosphereHLHKISWQFNLYFERFDVFFEKYKICQKSDKYWIDLKSLKLKGPQVGIIFTNG
Ga0268351_100996923300028246PhyllosphereNLYFERFDVFFEKYKICQKSDKYWIDLESLKLKGPQIGIIFTNG
Ga0268324_102596913300028251PhyllosphereERFDVFFEKYKICQKSDKYWIDLKSLKLKGPQVRIIFTNG
Ga0268316_100325613300028253PhyllosphereERFDVSFEKYKICQKSDKCWIDLESLKLKGPQVRIIVTSG
Ga0268310_103772313300028262PhyllosphereIFFERYKICQKSDKYWIDLESLKLKGPQVGIIFTNG
Ga0268321_10713613300028466PhyllosphereKISWQFNLYFERFDVFFEKYKICQKSDKYWIDLKSLKLKGPQVGIIFTNG
Ga0268333_100111013300028467PhyllosphereHLHKISWQFNLYFERCDVFFEKYKICQKSDKYWIDLESLKLKGPQVGIIVTSD
Ga0268317_100410123300028468PhyllosphereMYFERFDVFFEKYKICQKSDKCWIDLESLKLKGPQVGI
Ga0268317_100829413300028468PhyllosphereQFNLYFERFDVFFEKYKICQKSDKYWIDLESLKLKGPQVGIIFTNG
Ga0268315_100784423300028472PhyllosphereMYFERFDVFFEKYKICQKSDKCWIDLESLKLRGPQVGIIV
Ga0268315_102664113300028472PhyllosphereLHKFLWQFNMYFERFDVFFEKYKICQKSDKYWIDLESLKLKGPQVEIIFTSG
Ga0268327_100534513300028475PhyllosphereLYFERCDVFFEKYKICQKSDKYWIDLESLKLKGPQVGIIVTSD
Ga0268327_100689323300028475PhyllosphereSVTHLHKISWQFNLYFERFDVFFEKYKICQKSDKYWIDLKSLKLKGPQVGIIFTNG
Ga0268305_10099513300028525PhyllosphereLHKISWQFNLYFERCDVFFEKYKICQKSDKYWIDLESLKLKGPQVGIIVTSD
Ga0268311_100465113300028529PhyllosphereDVFFEKYKICQKSDKYWIDLESLKLKGPQVGIIVTSD
Ga0214499_105737113300032697Switchgrass PhyllosphereLYFERFDIFFERYKICQKSDKYWIDLESLKLKGPQVEII
Ga0214499_113424413300032697Switchgrass PhyllosphereMYFERFDVFFEKYKICRKSDKCWIDLESLKLKGPQVGII
Ga0314742_107855013300032781Switchgrass PhyllosphereVTHLYKILWQFNLYFERFDVFFEKYKISQKRDKYWIDLESLKLKGPQVGIIFTSGCGT
Ga0314749_114390213300032915Switchgrass PhyllosphereHKISWQFNLYFERFDVFFEKYKICQKSDKYWIDLESLKLKGPQVGVIITSG
Ga0314741_108663513300032934Switchgrass PhyllosphereMATRWLSATHLHKFLWQFNMYFERFDVFFEKYKFCQKSDKYWIDIESLKLKGPQVEIIFTSG


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