Metagenome / Metatranscriptome Family F098479

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098479
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	98 residues
Representative Sequence	VVLAAGTAALDLTLRDTSTSLIAILMVSMIVGYLGPRRAWRWGLLFGAFLPLGHLVMHRSGELAGLLAFLPSFVGAYLGAFLEKMVRELRGSP
Number of Associated Samples	57
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	42.16 %
% of genes near scaffold ends (potentially truncated)	32.04 %
% of genes from short scaffolds (< 2000 bps)	76.70 %
Associated GOLD sequencing projects	53
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (74.757 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland (36.893 % of family members)
Environment Ontology (ENVO)	Unclassified (54.369 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.107 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 71.07% β-sheet: 0.00% Coil/Unstructured: 28.93%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00725	3HCDH	35.92
PF02737	3HCDH_N	19.42
PF12706	Lactamase_B_2	15.53
PF00753	Lactamase_B	12.62
PF01180	DHO_dh	2.91
PF00401	ATP-synt_DE	1.94
PF01593	Amino_oxidase	0.97
PF13672	PP2C_2	0.97
PF00481	PP2C	0.97
PF13565	HTH_32	0.97
PF02823	ATP-synt_DE_N	0.97
PF07228	SpoIIE	0.97
PF02882	THF_DHG_CYH_C	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	55.34
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	19.42
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	19.42
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	19.42
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	19.42
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	19.42
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	19.42
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	2.91
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	2.91
COG0167	Dihydroorotate dehydrogenase	Nucleotide transport and metabolism [F]	2.91
COG0355	FoF1-type ATP synthase, epsilon subunit	Energy production and conversion [C]	2.91
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	2.91
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	2.91
COG0190	5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase	Coenzyme transport and metabolism [H]	0.97
COG0631	Serine/threonine protein phosphatase PrpC	Signal transduction mechanisms [T]	0.97
COG0686	Alanine dehydrogenase (includes sporulation protein SpoVN)	Amino acid transport and metabolism [E]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.76 %
Unclassified	root	N/A	25.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.76 %
Unclassified	root	N/A	25.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.76 %
Unclassified	root	N/A	25.24 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	40.78 %
Unclassified	root	N/A	25.24 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	31.07 %
Unclassified	root	N/A	25.24 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	9.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	31.07 %
Unclassified	root	N/A	25.24 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	31.07 %
Unclassified	root	N/A	25.24 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.24 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	14.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.24 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	12.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10018177	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4421	Open in IMG/M
3300000567\|JGI12270J11330_10037267	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2763	Open in IMG/M
3300001356\|JGI12269J14319_10041853	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2857	Open in IMG/M
3300004091\|Ga0062387_100030094	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2385	Open in IMG/M
3300004092\|Ga0062389_104438285	Not Available	528	Open in IMG/M
3300004152\|Ga0062386_101708386	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300009520\|Ga0116214_1007385	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3920	Open in IMG/M
3300009522\|Ga0116218_1036004	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2230	Open in IMG/M
3300009522\|Ga0116218_1323393	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300009525\|Ga0116220_10146233	Not Available	1014	Open in IMG/M
3300009672\|Ga0116215_1270546	Not Available	741	Open in IMG/M
3300009698\|Ga0116216_10304986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	970	Open in IMG/M
3300009824\|Ga0116219_10585598	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300009839\|Ga0116223_10061823	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2418	Open in IMG/M
3300010343\|Ga0074044_10064911	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2479	Open in IMG/M
3300010379\|Ga0136449_100205020	All Organisms → cellular organisms → Bacteria	3742	Open in IMG/M
3300010379\|Ga0136449_101296419	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300010379\|Ga0136449_101363396	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300010379\|Ga0136449_102496276	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	741	Open in IMG/M
3300014156\|Ga0181518_10034548	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3219	Open in IMG/M
3300016750\|Ga0181505_10686817	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300017821\|Ga0187812_1072876	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1138	Open in IMG/M
3300017821\|Ga0187812_1104303	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	925	Open in IMG/M
3300017821\|Ga0187812_1201767	Not Available	635	Open in IMG/M
3300017822\|Ga0187802_10169693	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	835	Open in IMG/M
3300017823\|Ga0187818_10105118	Not Available	1222	Open in IMG/M
3300017823\|Ga0187818_10191641	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300017926\|Ga0187807_1124375	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300017932\|Ga0187814_10208118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300017932\|Ga0187814_10248161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300017933\|Ga0187801_10036795	All Organisms → cellular organisms → Bacteria	1740	Open in IMG/M
3300017934\|Ga0187803_10042641	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1796	Open in IMG/M
3300017934\|Ga0187803_10148756	Not Available	921	Open in IMG/M
3300017939\|Ga0187775_10051966	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1254	Open in IMG/M
3300017939\|Ga0187775_10378292	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300017942\|Ga0187808_10064973	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1560	Open in IMG/M
3300017942\|Ga0187808_10098943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1267	Open in IMG/M
3300017942\|Ga0187808_10433668	Not Available	603	Open in IMG/M
3300017943\|Ga0187819_10011107	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5101	Open in IMG/M
3300017943\|Ga0187819_10090292	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1829	Open in IMG/M
3300017943\|Ga0187819_10219374	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300017943\|Ga0187819_10272193	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300017955\|Ga0187817_10043418	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2755	Open in IMG/M
3300017955\|Ga0187817_10050793	All Organisms → cellular organisms → Bacteria	2556	Open in IMG/M
3300017961\|Ga0187778_10093641	Not Available	1862	Open in IMG/M
3300017961\|Ga0187778_10104130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1766	Open in IMG/M
3300017961\|Ga0187778_10727651	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	672	Open in IMG/M
3300017966\|Ga0187776_10797321	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300017966\|Ga0187776_11295644	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300017972\|Ga0187781_10515133	Not Available	859	Open in IMG/M
3300017972\|Ga0187781_10782801	Not Available	692	Open in IMG/M
3300017972\|Ga0187781_10834900	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300017972\|Ga0187781_11067854	Not Available	592	Open in IMG/M
3300017973\|Ga0187780_10091506	All Organisms → cellular organisms → Bacteria	2094	Open in IMG/M
3300017973\|Ga0187780_10416501	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300017975\|Ga0187782_10001180	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	18694	Open in IMG/M
3300017975\|Ga0187782_10313611	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1184	Open in IMG/M
3300017999\|Ga0187767_10290096	Not Available	554	Open in IMG/M
3300018001\|Ga0187815_10357245	Not Available	621	Open in IMG/M
3300018001\|Ga0187815_10467264	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300018006\|Ga0187804_10137495	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1023	Open in IMG/M
3300018006\|Ga0187804_10335342	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	663	Open in IMG/M
3300018007\|Ga0187805_10427976	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300018012\|Ga0187810_10225776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300018032\|Ga0187788_10127332	Not Available	943	Open in IMG/M
3300018058\|Ga0187766_10617874	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300018062\|Ga0187784_10900634	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300018064\|Ga0187773_10393901	Not Available	800	Open in IMG/M
3300018085\|Ga0187772_10266248	Not Available	1167	Open in IMG/M
3300018085\|Ga0187772_10701512	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300018085\|Ga0187772_11247105	Not Available	549	Open in IMG/M
3300018085\|Ga0187772_11433684	Not Available	513	Open in IMG/M
3300018086\|Ga0187769_10258813	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1296	Open in IMG/M
3300018086\|Ga0187769_10264402	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300018086\|Ga0187769_10717409	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300018086\|Ga0187769_11409673	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300018088\|Ga0187771_10671067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300018088\|Ga0187771_10684463	Not Available	870	Open in IMG/M
3300018088\|Ga0187771_10798246	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300018088\|Ga0187771_11478737	Not Available	576	Open in IMG/M
3300018088\|Ga0187771_11623657	Not Available	549	Open in IMG/M
3300018088\|Ga0187771_11908017	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300018090\|Ga0187770_10250423	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1372	Open in IMG/M
3300018090\|Ga0187770_10406609	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300018090\|Ga0187770_10995139	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300018090\|Ga0187770_11212106	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300027625\|Ga0208044_1107529	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	807	Open in IMG/M
3300027696\|Ga0208696_1024258	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2252	Open in IMG/M
3300027783\|Ga0209448_10014336	All Organisms → cellular organisms → Bacteria	2568	Open in IMG/M
3300027854\|Ga0209517_10063896	Not Available	2662	Open in IMG/M
3300027905\|Ga0209415_10999297	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300032160\|Ga0311301_10154046	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4141	Open in IMG/M
3300032160\|Ga0311301_10820659	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1272	Open in IMG/M
3300032261\|Ga0306920_101006014	Not Available	1214	Open in IMG/M
3300032783\|Ga0335079_10022483	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7219	Open in IMG/M
3300032783\|Ga0335079_10070340	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3984	Open in IMG/M
3300032783\|Ga0335079_10284078	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1810	Open in IMG/M
3300032892\|Ga0335081_11008127	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	969	Open in IMG/M
3300032893\|Ga0335069_10013325	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	11548	Open in IMG/M
3300033158\|Ga0335077_10198007	Not Available	2261	Open in IMG/M
3300033158\|Ga0335077_11598008	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300033808\|Ga0314867_046308	Not Available	1020	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.99%
Aquatic	Environmental → Aquatic	33.01%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.99%
Freshwater	Environmental → Aquatic → Freshwater	33.01%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	45.63%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	33.01%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	21.36%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	45.63%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	27.18%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.39%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.97%

Habitat	Taxonomy	Distribution
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	36.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	27.18%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	20.39%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.80%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.97%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.97%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033808	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100181772	3300000567	Peatlands Soil	VVLAAGTTALDLTLRDTSTSLIAILLASMIVGYLGPRRAWRWGLLFGAFFPLGHLLMRRSGELAGLLAFLPSFVGAYLGAFLEKMVRELRGSP*
JGI12270J11330_100372672	3300000567	Peatlands Soil	VVLAAGTAALDLTLRDTSTSLIAILMVSMIVGYLGPRRAWRWGLLFGAFLPLGHLVMHRSGELAGVLAFLPSFVGAYLGAFLEKMVRELRGSP*
JGI12269J14319_100418532	3300001356	Peatlands Soil	VVLAAGTAALDLTLRDTSTSLIAILMVSMIVGYLGPRRAWRWGLLFGAFLPLGHLVMHRSGELAGLLAFLPSFVGAYLGAFLEKMVRELRGSP*
Ga0062387_1000300944	3300004091	Bog Forest Soil	ALDLTLRDTSTSLIAILMVSMIVGYLGPPRAWRWGLLFGAFLPLGHLVMRRGGELAGVLAFLPSFVGAYLGAFLEKMVRELRGSP*
Ga0062389_1044382852	3300004092	Bog Forest Soil	ALDLTLRDTSTSLIAILMVSMIVGYLGPRRPWRWGLLFGAFLPLGHLVMHRSGELAGVLAFLPSFVGAYLGAFLEKMVRELRGSP*
Ga0062386_1017083861	3300004152	Bog Forest Soil	VVLAAGTAALDLTLRDTSTSLIAILMVSMIAGYLGPRRAWRWGLLFGAFLPLGHLVMHRSGELAGLLAFLPSFVGAYLGAFLEKMVRELRGAP*
Ga0116214_10073855	3300009520	Peatlands Soil	LAAGTAALDLTLRDTSTSLIAILMVSMIVGYLGPRRAWRWGLLFGAFLPLGHLVMHRSGELAGVLAFLPSFVGAYLGAFLEKMVRELRGSP*
Ga0116218_10360044	3300009522	Peatlands Soil	LAAGTVALDLTLRDTSTSLIAILMVSMIVGYLGPRRAWRWGLLFGAFLPLGHLVMHRSGELAGVLAFLPSFVGAYLGAFLEKMVRELRGSP*
Ga0116218_13233932	3300009522	Peatlands Soil	VVLAAGTTALDLTLRDTSTSLIAILLASMIVGYLGPRRAWRWGLLFGAFLPLSHLVMRRGGELAGVLAFLPSFVGAYLGAFLEKMVRELRGSP*
Ga0116220_101462332	3300009525	Peatlands Soil	LAAGTAALDLTLRDTSTSLIAILMVSMIVGYLGPRRAWRWGLLFGAFLPLGHLVMHRSGELEGLLAFLPSFVGAYLGAFLEKMVRELRGSP*
Ga0116215_12705461	3300009672	Peatlands Soil	VVLAAGTAALDLALRDTSTSLIAILLASMIVGYLGPRRAWRWGLLFGAFLPLGHLLMHRSGELAGVLAFLPSFVGAYLGAFLEKMVRELRGAP*
Ga0116216_103049861	3300009698	Peatlands Soil	LLVAVVLAAGTAALDLALRDTSTSLIAILLASMIVGYLGPRRAWRWGLLFGAFFPLGHLLMRRSGELAGLLAFLPSFVGAYLGAFLEKMVRELRGSP*
Ga0116219_105855982	3300009824	Peatlands Soil	VVLAAGTAALDLALRDTSTSLIAILLASMIVGYLGPRRAWRWGLLFGAFLPLGHLVMHRSGELAGVLALLPSFVGAYLGAFLEKMVRELRG
Ga0116223_100618231	3300009839	Peatlands Soil	RDTSTSLIAILMVSMIVGYLGPRRAWRWGLLFGAFLPLGHLVMRRSGELAGVLAFLPSFVGAYLGAFLEKMVRELRGSP*
Ga0074044_100649113	3300010343	Bog Forest Soil	VLDLTLRDTSTSLIAILFFCTVVGYFGPRRAWRWGLLFGAFLPLGHLVMHRSGELAGVLAFLPSFVGAYLGAFLEKMVRELRGSP*
Ga0136449_1002050203	3300010379	Peatlands Soil	VVLAAGTAALDLTLRDTSTSLIAILLVSMIVGYLGPRRAWRWGLLFGAFLPLSHLVMRRGGELAGVLAFLPSFVGAYLGAFLEKMVRELRGSP*
Ga0136449_1012964192	3300010379	Peatlands Soil	VVLAAGTAALDLALRDTSTSLIAILLASMIVGYLGPRRAWRWGLLFGAFFPLGHLVMRRGGELAGVLAFLPSFVGAYLGAFLEKMVRELRGSP*
Ga0136449_1013633961	3300010379	Peatlands Soil	TAALDLTLRDTSTSLIAILMVSMIVGYLGPRRAWRWGLLFGAFLPLGHLVMHRSGELAGLLAFLPSFVGAYLGAFLEKMVRELRGSP*
Ga0136449_1024962761	3300010379	Peatlands Soil	DTEVARPTRTWLVAVVLAAGTAALDLTLRDTSTSLIAILMVSMIAGYLGPRRAWRWGLLFGAFLPLSHLVMRRSGELAGVLAFLPSFVGAYLGAFLEKMVRELRGSP*
Ga0181518_100345485	3300014156	Bog	VVLAAGTAALDLTLGDTSTSLIAILMVSMIVGYLGPRRAWRWGLLFGAFLPLGHLVMHRSGELAGLLAFLPSFVGAYLGAFLEKMVRELRGSP*
Ga0181505_106868171	3300016750	Peatland	VVLAAGTAALDLTLGDTSTSLIAILMVSMIVGYLGPRRAWRWGLLFGAFLPLGHLVMHRSGELAGLLAFLPSFVGAYLGAFLEKMVRELRGSP
Ga0187812_10728762	3300017821	Freshwater Sediment	VVLAAGTAALDLALRDTSTSLIAILMVSMIVGYLGPRRAWRWGLLFGAFLPLGHLAMRRSGELAGLLAFLPSFVGAYLGAFLEKMVRELRGSP
Ga0187812_11043032	3300017821	Freshwater Sediment	MVAVVLAAATAALDLTLRDTSTSLIAILFVSMVIGYFGPQRAWRWGLLFGAFLPLGHFVAHRGGELSGLLAFVPSFVGAYLGAFLEKMVRELRGPP
Ga0187812_12017672	3300017821	Freshwater Sediment	NQIRSTFGMRAPAPSRGEISLWIIAVIFAAALAALDLTLRDTSTSLIAILFVSMVIGYFGPKRAWRWGLLFGAFLPLGHLVMRRSGEFSGLLALVPSFVGAYLGSFLDKMVQELRGPR
Ga0187802_101696932	3300017822	Freshwater Sediment	VVLAAGTAALDLALRDTSTSLIAILVVSMIAGYLGPRRAWRWGLLFGAFLPLGHLAMRRSGELAGLLAFLPSFVGAYLGAFLEKMVRELRGSP
Ga0187818_100558181	3300017823	Freshwater Sediment	SRPDGRGRPSPRDPFGREAVLWIVAIALATGTAALDLTLRDTSTSLIAILMVAMIVGYLGPRRAWRWGLLVGAFLPLGHLVMRRSGELAGLLAFLPSFVGAYLGAFLEKMVRELRGSP
Ga0187818_101051181	3300017823	Freshwater Sediment	VRLFSRGEFSLWIVAVSLAAATAALDLALRDTSTSLIAILMVSMIVGYLGPRRAWRWGLLFGAFLPLGHLAMRRSGELAGLLAFLPSFVGAYLGAFLEKMVRELRGSP
Ga0187818_101916411	3300017823	Freshwater Sediment	MRAPAPSRREISLWITAVLLAAALAALDLTLRDTSTSLIAILFVSMVIGYFGPKRAWRWGLLFGAFLPLGHLVMRRSGEFSGLLALVPSFVGAYLGSFLDKMVQELRGPR
Ga0187807_11243752	3300017926	Freshwater Sediment	MRAPAPSRGEISLWIIAVILAAALAALDLTLRDTSTSLIAILCVSMVIGYFGPKRAWRWGLLFGAFLPLGHLVMRRSGEFSGLLALVPSFVGAYLGSFLDKMVQELRGPR
Ga0187814_102081181	3300017932	Freshwater Sediment	MRAPAPSRGEISLWIIAVIFAAALAALDLTLRDTSTSLIAILFVSMVIGYFGPKRAWRWGLLFGAFLPLGHLVMRRSGEFSGLLALVPSFVGAYLGSF
Ga0187814_102481612	3300017932	Freshwater Sediment	TLRDTSTSLIAILLVSMVIGYFGPRRAWRWGLLFGAFLPLGHFVMGRGGELSGLMAFVPAFVGAYLGAFLEKMVRELRGSP
Ga0187801_100367952	3300017933	Freshwater Sediment	VVLAAGTAALDLALRDTSTSLIAILMVSLIVGYLGPRRAWRWGLLFGAFLPLGHLAMRRSGELAGLLAFLPSFVGAYLGAFLEKMVRELRGSP
Ga0187803_100426413	3300017934	Freshwater Sediment	VVLAAGTAALDLKLRDTSTSLIAILMASMIVGYLGPRRAWRWGLLFGAFLPLGHLAMRRSGELAGLLAFLPSFVGAYLGAFLEKMVRELRGAP
Ga0187803_101487562	3300017934	Freshwater Sediment	MVAVILAACTAALDLKLADTSTSLIAILLVATIVGYFGPRHAWRWGLLLGAFLPLGHLVMRRGGELSGLLAFVPSFVGAYLGSFLEKMVRELRGSP
Ga0187775_100519662	3300017939	Tropical Peatland	LLWTVAIVLATATAALDLTLRDTSTSLIAILFASMVIGYFGPRRVWRWGLLFGAFFPLGHLLAHRGGQLSGVFAFLPSFVGAYLGAFLEKMVRELIGSK
Ga0187775_103782922	3300017939	Tropical Peatland	MAAVVFAAGTAVLDLTLRDISTSLIAILFLAMLIGYFGPRRAWRWGLLFGAFLPLGHFLAHRSGELSGLFAFLPSFVGAYLGAFLEKMVRELRGSE
Ga0187808_100649731	3300017942	Freshwater Sediment	VVLAAGTAALDLALRDTSTSLIAILMVSMIVGYLGPRRAWRWGLLFGAFLPLGHLAMRRSGELAGLLAFLPSFVGAYLGAFLEKMVR
Ga0187808_100989432	3300017942	Freshwater Sediment	MRAPVPSRGEISLWIIAVILAAALAALDLTLRDTSTSLIAILFVSMVIGYFGPKRAWRWGLLFGAFLPLGHLVMRRSGEFSGLLALVPSFVGAYLGSFLDKMVQELRGPR
Ga0187808_104336682	3300017942	Freshwater Sediment	WLVAVVLAAGAAALDLTLRDTSTSLIAILLGSMIVGYLGPRRAWRWGLLFGAFLPLGHLVMRRSGELSGLLAFLPSFVGAYLGAFLEKMVRELRGSP
Ga0187819_100111075	3300017943	Freshwater Sediment	MRAPVPSRGEISLWIIAVIFAAALAALDLTLRDTSTSLIAILFVSMVIGYFGPKRAWRWGLLFGAFLPLGHLVMRRSGEFSGLLALVPSFVGAYLGSFLDKMVQELRGPR
Ga0187819_100902922	3300017943	Freshwater Sediment	MVAVVLAAATAALDLTLRDTSTSLIAILFVSMVIGYFGPHRAWRWGLLFGAFLPLGHFVAHRGGELSGLLAFVPSFVGAYLGAFLEKMVRELRGPP
Ga0187819_102193742	3300017943	Freshwater Sediment	VVLAAGTATLDLTLRDTSTSLIAILLASMIVGYLGPRRAWRWGLLFGAFFPLGHLVMRRGGELAGLLAFLPSFVGAYLGAFLEKMVRELRGAP
Ga0187819_102721931	3300017943	Freshwater Sediment	TSTSLIAILMVSMIVGYLGPRRAWRWGLLFGAFLPLGHLAMRRSGELAGLLAFLPSFVGAYLGAFLEKMVRELRGSP
Ga0187817_100434182	3300017955	Freshwater Sediment	MVAVVLAAATAALDLTLRDTSTSLIAILFVSMVIGYFGPHRAWRWGLLFGAFLPLGHFVAHRGGELSGLLAFVPSFVGAIWGHSLRKWCAS
Ga0187817_100507933	3300017955	Freshwater Sediment	MRAPAPSRREISLWIIAVFLAAALAALDLTLRDTSTSLIAILFVSMVIGYFGPKRAWRWGLLFGAFLPLGHLVMRRSGEFSGLLALVPSFVGAYLGSFLDKMVQELRGPR
Ga0187778_100936411	3300017961	Tropical Peatland	MGGKSRGQFLVWIVAIALAAGTAALDVRLGDTSTSLIAILFFATVIGYFGPQRAWRWGLLFGAFLPLGHLVTHRSGELSGVLAFLPSFIGAYLGAFLEKMLRELRGSP
Ga0187778_101041301	3300017961	Tropical Peatland	MRAPGPSRREISIWIIAVFLAAALAALDLTLRDTSTSLIAILFVAMVIGYFGPKRAWRWGLLFGAFLPLGHLVMRRSGEFSGLLALVPSFVGAYLGSFLDKMVQELRGPR
Ga0187778_107276512	3300017961	Tropical Peatland	MGAVVLAAGTTALDLILRDTSTSLIAILFVSMVIGYFGPRRAWRWGLLFGAFLPLGHLLWRRAGEFSGVLAFLPSFVGAYLGAFLEKMVRELIGPP
Ga0187776_107973212	3300017966	Tropical Peatland	MRAPAPSRREISIWIIAVFLAAATAVLDLTLCDTSTSLIAILFVSMVIGYIGPRRAWRWGLLCGAFCPLGHFLVHRGGELSGVFAFLPSFVGAYLGAFLEKMVRELRG
Ga0187776_112956441	3300017966	Tropical Peatland	VVIVAAGTATLDLTLRDTSTSLIAILFVSMVIGYFGPRRAWRWGLLFGAFLPVGHLVARRGGELSGLLAFVPSFVGAYLGAFLEKMVRELI
Ga0187781_105151331	3300017972	Tropical Peatland	MLRDTSTSLIAILFVSMLIGYFGPRRAWRWGLLFGAFLPLGHFVTHRSGELSGVLAFLPSFIGAYLGAFLEKMVRELKGSP
Ga0187781_107828012	3300017972	Tropical Peatland	GRPRPSGRDFVAPAFNWRMGLSASAGKSRGEFLLWFVAVVLAAGTAALDVMLGDTSTSLIAILFFATVIGYFGPRRAWQWGLLFGAFLPLGHLVMRRSGELSGVLAFLPSFIGAYLGAFLEKMVRELRGSP
Ga0187781_108349002	3300017972	Tropical Peatland	MALTSRLRQTLVVTAALVLAAATAALDVTLGDTSTSLIAILFFATVIGYFGPRRAWRWGLLFGAFLPLGHLVARRSGELSGVLAFLPSFIGAYLGAFLEKMVRELRGSP
Ga0187781_110678542	3300017972	Tropical Peatland	MLGDTSTSLIAILFFATLIGYFGPRRAWRWGLLFGAFLPVGHLVTRRSGELSGVLAFLPSFIGAYLGAFLEKMVRELRGSP
Ga0187780_100915062	3300017973	Tropical Peatland	MRAPGPSRREISIWIIAVFLAAALAALDLTLRDTSTSLIAILFVAIVIGYLGPKRAWRWGLLFGAFLPLGHLVMRRSGEFSGLLALVPSFVGAYLGSFLDKMVQELRGPR
Ga0187780_104165012	3300017973	Tropical Peatland	MRARREISIWIIAVFLAALLAALDLTLRDTSTSLLAILFVAMVIGYFGPKRAWRWGLLFAAFLPLGHLVTHRSGEFSGLLALVPSFVGAYLGSFLEKMVRELRAPR
Ga0187782_1000118014	3300017975	Tropical Peatland	MRAPAPSRREISLWIIAVFLAAALAALDLTLRDTSTSLIAILFVAMAIGYFGPKRAWRWGLLFGAFLPLGHLVMRRSGEFSGLLALVPSFVGAYLGSFLDKMVQELRGPR
Ga0187782_103136112	3300017975	Tropical Peatland	MLLWTAAVVLAAGTAALDVMLGDTSTSLIAILFFATLIGYFGPRRAWRWGLLFGAFLPVGHLVTRRSGELSGVLAFLPSFIGAYLGAFLEKMVRELRGSP
Ga0187767_102900962	3300017999	Tropical Peatland	MRARREISIWIIAVFLAALLAALDLTLRDTSTSLLAILFVAMVIGYFGPKRAWRWGLLFGAFLPLGHLVMRRSGEFSGLLALVPSFVGAYLGSFLDKMVQELRGPR
Ga0187815_103572451	3300018001	Freshwater Sediment	TAALDLTLRDTSTSLIAILLVSMVIGYFGPRRAWRWGLLFGAFLPLGHLMMHRSGELAGLLAFLPAFVGAYLGAFLEKMVRELRGSP
Ga0187815_104672642	3300018001	Freshwater Sediment	MRAPVPSRGEISLWIIAVILAAALAALDLTLRDTSTSLIAILFVSMVIGYFGPKRAWRWGLLFGAFLPLGHLVMRRSGEFSGLLALVPSFVGAYLGSF
Ga0187804_101374952	3300018006	Freshwater Sediment	VVLAAGTATLDLTLRDTSTSLIAILLASMIVGYLGPRRAWRWGLLLGASLPLGHLAMRRSGELAGLLAFLPSFVGAYLGAFLEKMVRELRGSP
Ga0187804_103353422	3300018006	Freshwater Sediment	VVAVVLTAGTATLDLTLRDTSTSLIAILLASMIVGYLGPRRAWRWGLLFGAFFPLGHLVMRRGGELAGLLAFLPSFVGAYLGAFLEKMVRELRGAP
Ga0187805_104279761	3300018007	Freshwater Sediment	VVLAAGTAALDLALRDTSTSLIAILMVSMIVGYLGPRRAWRWGLLFGAFLPLGHLMMHRSGELAGLLAFLPAFVGAYLVA
Ga0187810_102257761	3300018012	Freshwater Sediment	LTLQDTSTSLIAILLVSMIVGYFGPQRAWRWGLLFGAFLPLGHLLWRRGGELSGLLAFVPSFVGAYLGAFLEKMVRELRGSP
Ga0187788_101273322	3300018032	Tropical Peatland	MSRREVILWVIAVILAGSTAALDLILRDTSTSLIAILLASLVVGYLGPRRAWRWGLLFGSFLPIGHLVTRRGGELAGVLGLLPSFVGAYLGAFLEKMVR
Ga0187766_106178742	3300018058	Tropical Peatland	MRARREISIWIIAVFLAAALAALDLTLRDTSTSLIAILFVAIVIGYLGPKRAWRWGLLFGAFLPLGHLVMRRSGEFSGLLALVPSFVGAYLGSFLDKMVQELRGPR
Ga0187784_109006341	3300018062	Tropical Peatland	MLVWAAAVLLAAGTAALDVVLGDTSTSLIAILFFATVIGYFGPRRAWRWGLLFGAFLPLGHLVSRRSGELSGVLAFLPSFIGAYLGAFLEKMVRELRGT
Ga0187773_103939012	3300018064	Tropical Peatland	MRAMSRREVILWVIAVILAGSTAALDLILRDTSTSLIAIVLASLVVGYLGPQRAWRWGLLFGAFLPIGHLVTRRGGELAGVLGLLPSFVGAYLGAFLEKMVRELRGAP
Ga0187772_102662481	3300018085	Tropical Peatland	PPPANPARLAFRMALTSRLRQTLVVTAALVLAAATAALDVTLGDTSTSLIAILFFATVIGYFGPRRAWRWGLLFGAFLPLGHLVARRSGELSGVLAFLPSFIGAYLGAFLEKMVRELRGS
Ga0187772_107015122	3300018085	Tropical Peatland	MRAPAPSRREISLWIIAVVLAAALAALDLTLRDTSTSLIAILFVAMVVGYFGPKRAWRWGLLFGAFLPLGHLVMRRSGEFSGLLALVPSFVGAYLGSFLDKMVQELRGPR
Ga0187772_112471051	3300018085	Tropical Peatland	LVSSRSETLVWAMAVILAAATTTLDLILRDTSTSLIAILFFATLIAYFGPRRAWRWGLLFGAFLPLGHLLTRRSGELSGVLAFLPSFIGAYLGAFLEKMVRELRGT
Ga0187772_114336841	3300018085	Tropical Peatland	NWRMGLSAISGKSRGESILWFVAIVLAAGTAALDVVLGDTSTSLIAILFFATLIAYFGPRRAWRWGLLFGAFLPLGHLLTRRSGELSGVLAFLPSFIGAYLGAFLEKMVRELRGSP
Ga0187769_102588132	3300018086	Tropical Peatland	MALTSRLRQTLVVTAALVLAAGTATLDLTLRDTSTSLIAILFASMVIGYLGPRDAWRWGLLFGAFLPLGHLLAHRGGELSGVLAFLPSFIGAYLGAFLEKMVRELRASP
Ga0187769_102644022	3300018086	Tropical Peatland	LRAEVSLWIIAIALAVGIAALDLTLRDTSTSLIAILFASMVMGYFGPKRAWRWGLLFGAFLPLGHLVMRRSGEFSGLLALVPSFVGAYLGSFLEKMVRELRAPR
Ga0187769_107174091	3300018086	Tropical Peatland	MLLWTAAVVLAAGTAALDVMLGDTSTSLIAILFFATLIGYFGPRRAWRWGLLFGAFLPVGHLVTRRSGELSGVLAFLPSFIGAYLGAFLEKMVRELRGT
Ga0187769_114096731	3300018086	Tropical Peatland	LWTAAVVLASTTAALDVTLGDTSTSLIAILFFATVMGYFGPQRAWRWGLLFGAFLPLGHLLAHRGGELSGVLAFLPSFIGAYLGSFLEKMLRELRKSP
Ga0187771_106710671	3300018088	Tropical Peatland	NLARLAFRMALTSRLRQTFVVTAALVLAAATAMLDVTLRDTSTSLIAILFASMVIGYLGPRDAWRWGLLFGAFLPLGHLLAHRGGELSGVLAFLPSFIGAYLGAFLEKMVRELRASP
Ga0187771_106844631	3300018088	Tropical Peatland	IAVVLAAALAALDLTLRDTSTSLIAILFVAMVVGYFGPKRAWRWGLLFAAFLPLGHLVTHRSGEFSGLLALVPSFVGAYLGSFLEKMVRELRAPR
Ga0187771_107982462	3300018088	Tropical Peatland	MGLSAIAGKSRGEFLLWIVAIALATGTAALDVALRDTSTSLIAILFLAMIMGYFGPQRAWRWGLLFGAFLPLGHLVMHRSGELSGVLAFLPSFVGAYLGAFLEKMVRELRGT
Ga0187771_114787372	3300018088	Tropical Peatland	AAGTAALDLTLRDTSTSLIAILMVSMVVGYWGPRRAWRWGLLFGAFLPLGHLLWHRTGELSGLLAFVPSFVGAYLGAFLEKMVRELRGSP
Ga0187771_116236571	3300018088	Tropical Peatland	RLRDTSTSLIAILFVSMVIGYFGPRRAWRWGLLIGAFLPLGHLLAHRSGELSGVLAFLPSFVGAYLGAFLEKMVRGLRGRE
Ga0187771_119080172	3300018088	Tropical Peatland	MPEPAPSRKEIFLWIIAVILASATAALDLTLRDTSTSLIAILFVSMVIGYFGPQRAWRWGLLIGAFLPLGHLLAHRSGELSGVLAFLPSFVGAYLGAFLE
Ga0187770_102504232	3300018090	Tropical Peatland	VAIALAGATAALDVVLGDTSTSLIAILFCATVIGYFGPRRAWRWGLLFGVFLPLGHLVARRSGELSGVLAFLPSFIGAYLGAFLEKMVRELRGSP
Ga0187770_104066092	3300018090	Tropical Peatland	LDLTLQDTSTSLIAILFVSMVIGYFGPWRAWRWGLLFGAFLPLGHLLWRRTGEFSGVLAFLPSFVGAYLGAFLEKMVRELIGSP
Ga0187770_109951392	3300018090	Tropical Peatland	VGTAALGRDYVAPALSGRIGLSAIAGKSREQFFVWIVAIALAAGTAALDVVLGDTSTSLIAILSFATGIAYFGPRRAWRWGLLFGAFLPLGHLVTRRSGELSGVLAFLPSFIGAYLGAFLEKMVRELKGSP
Ga0187770_112121062	3300018090	Tropical Peatland	VHPFSRGEFSLWIAAVVLAAGAAALDLTLRDTSTSLIAILVASMIVGYLGPRRAWRWGLLFGAFLPFGHLLWHRTGELSGLLAFVPSFVGAYLGAFLEKMVRELRGSP
Ga0208044_11075292	3300027625	Peatlands Soil	VVLAAGTAALDLTLRDTSTSLIAILMVSMIVGYLGPRRAWRWGLLFGAFLPLGHLVMHRSGELAGVLAFLPSFVGAYLGAFLEKMVRELRGSP
Ga0208696_10242582	3300027696	Peatlands Soil	VVLAAGTTALDLTLRDTSTSLIAILLASMIVGYLGPRRAWRWGLLFGAFFPLGHLLMRRSGELAGLLAFLPSFVGAYLGAFLEKMVRELRGSP
Ga0209448_100143363	3300027783	Bog Forest Soil	VVLAAGTAALDLTLRDTSTSLIAILMVSMIVGYLGPPRAWRWGLLFGAFLPLGHLVMRRGGELAGVLAFLPSFVGAYLGAFLEKMVRELRGSP
Ga0209517_100638961	3300027854	Peatlands Soil	VVLAAGTAALDLTLRDTSTSLIAILMVSMIVGYLGPRRAWRWGLLFGAFLPLGHLVMHRSGELAGLLAFLPSFVGAYLGAFLEKMVRELRGSP
Ga0209415_109992971	3300027905	Peatlands Soil	VVLAAGTAALDLTLRDTSTSLIAILLVSMIVGYLGPRRAWRWGLLFGAFLPLSHLVMRRGGELAGVLAFLPSFVGAYLGAFLEKMV
Ga0311301_101540463	3300032160	Peatlands Soil	VVLAAGTAALDLTLRDTSTSLIAILLVSMIVGYLGPRRAWRWGLLFGAFLPLSHLVMRRGGELAGVLAFLPSFVGAYLGAFLEKMVRELRGSP
Ga0311301_108206592	3300032160	Peatlands Soil	VVLAAGTAALDLALRDTSTSLIAILLASMIVGYLGPRRAWRWGLLFGAFFPLGHLVMRRGGELAGVLAFLPSFVGAYLGAFLEKMVRELRGSP
Ga0306920_1010060141	3300032261	Soil	LRREVSVTIIAIVFAAATATLDLVLGDTSTSLIAILLFGMTIGYVGPQRVWRWGLLFGASLPLAHLAMRRGGELWGLLGLVPAFVGAYLGLFLEKMIRELRASPHRD
Ga0335079_100224837	3300032783	Soil	VGSKPTGAPQSRKPLLWVVAIALAAATSVLDVLLRDTSTSLIAILFFAMIIAYFGPRRAWRWGLLFGAFLPLGHLVARRGGELSGVLAFLPAFIGAYLGAFLEKMVRELRGSP
Ga0335079_100703405	3300032783	Soil	VVLAAGTAALDLILRDTSTSLIAILFVAMVIGYFEPRRAWRWGLLLGASLPLGHLVLHRSGELAGLLAFVPAFVGAYLGAFLEKMVRELRGSP
Ga0335079_102840782	3300032783	Soil	LTATETQKQGALWIAAVVLAAGTAALDLSLRDTSTSLIAILLVSMIVGYLGPRRAWRWGLLFGAFLPLAHLLWHRGGELSGLLAFMPSFVGAYLGSFLEKMVRELMRAP
Ga0335081_110081272	3300032892	Soil	MRAPAPSRREISIWIIAVFLAAALAALDLTLRDTSTSLIAILFVSMVIGYFGPNRAWRWGLLFGGFLPLGHLVMHRSGEFSGLLALVPSFVGAYLGSFLDKMVQELRGPR
Ga0335069_1001332511	3300032893	Soil	MRAAAPLSREIFIWIIAIVLAAATAVLDLTLRDTSTSLIAILFVSMVVGYFGPRRAWHWGLLFGAFFPLGHLLAHRGGELSGVFGFLPAFVGAYLGAFLEKMVRELLGP
Ga0335077_101980071	3300033158	Soil	VWAAAVVLAAGTAALDLTLRDTSTSLIAILLVAIIVGYFGPQRAWRWGLLLGAFLPLAHLAMRRAGELSGLLAFVPAFVGAYLGSFLEKMVRELLRSP
Ga0335077_115980082	3300033158	Soil	VGSKPTGAPQSRKPLLWVVAIALAAATSVLDVLLRDTSTSLIAILFFAMIIAYFGPRRAWRWGLLFGAFLPLGHLVARRGGELSGVLAFLPAFIGAYLGAFLE
Ga0314867_046308_600_938	3300033808	Peatland	VGSKPTGAAQARKRLLWVVAIALAAATAALDVALRDTSTSLIAILFFAMIIAYFGPRRAWRWGILFGALLPLAHLLARRSGELSGVLAFLPSFIGAYLGAFLEKMVRELRSS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098479

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences