Metagenome Family F098346

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098346
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	47 residues
Representative Sequence	MNNHEKALYTYAAIQKRKAKENKLKEQDIEIYLKKRLGKLGFIKNSAKVY
Number of Associated Samples	4
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	33.98 %
% of genes near scaffold ends (potentially truncated)	23.30 %
% of genes from short scaffolds (< 2000 bps)	90.29 %
Associated GOLD sequencing projects	2
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.136 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified → Hypersaline (100.000 % of family members)
Environment Ontology (ENVO)	Unclassified (88.350 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Hypersaline (saline) (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 88.00% β-sheet: 0.00% Coil/Unstructured: 12.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF03796	DnaB_C	22.33
PF00436	SSB	7.77
PF11753	DUF3310	2.91
PF07659	DUF1599	2.91
PF13481	AAA_25	0.97
PF01807	zf-CHC2	0.97
PF13392	HNH_3	0.97
PF02796	HTH_7	0.97
PF03819	MazG	0.97
PF00772	DnaB	0.97
PF01844	HNH	0.97
PF06356	DUF1064	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	23.30
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	22.33
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	7.77
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	7.77
COG0358	DNA primase (bacterial type)	Replication, recombination and repair [L]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
All Organisms	root	All Organisms	37.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
cellular organisms	root	All Organisms → cellular organisms	26.21 %
Viruses	superkingdom	All Organisms → Viruses	11.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	26.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	23.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	23.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	21.36 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	21.36 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	21.36 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Clostridium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	21.36 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Clostridium algoriphilum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium algoriphilum	11.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.65 %
Clostridium botulinum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium botulinum	2.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.94 %
Clostridium estertheticum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium estertheticum	0.97 %
Clostridium tagluense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium tagluense	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000405\|LV_Brine_h2_0102DRAFT_1008481	Not Available	2259	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1009799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2067	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1009828	Not Available	2062	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1012225	All Organisms → Viruses → Predicted Viral	1813	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1013246	All Organisms → cellular organisms → Bacteria → Proteobacteria	1715	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1014885	All Organisms → Viruses → Predicted Viral	1586	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1014897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	1586	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1017386	Not Available	1433	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1021923	Not Available	1233	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1022656	Not Available	1205	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1024338	Not Available	1151	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1025302	Not Available	1122	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1027111	Not Available	1073	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1032404	Not Available	954	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1035633	Not Available	896	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1037397	Not Available	868	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1037794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium algoriphilum	862	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1038453	Not Available	852	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1039943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	830	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1043955	Not Available	778	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1044497	Not Available	771	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1044569	Not Available	771	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1046052	Not Available	753	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1046362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium tagluense	750	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1048837	Not Available	724	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1049296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium botulinum	718	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1050423	Not Available	707	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1050644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium algoriphilum	705	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1051529	Not Available	697	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1053968	Not Available	675	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1055809	Not Available	659	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1066004	Not Available	586	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1066009	Not Available	586	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1075363	Not Available	533	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1078769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium botulinum	517	Open in IMG/M
3300000405\|LV_Brine_h2_0102DRAFT_1080700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium algoriphilum	508	Open in IMG/M
3300000525\|JGI1221J11331_1020400	All Organisms → Viruses → Predicted Viral	1579	Open in IMG/M
3300000525\|JGI1221J11331_1023221	Not Available	1428	Open in IMG/M
3300000525\|JGI1221J11331_1026973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium algoriphilum	1277	Open in IMG/M
3300000525\|JGI1221J11331_1043300	Not Available	897	Open in IMG/M
3300000525\|JGI1221J11331_1044271	Not Available	882	Open in IMG/M
3300000525\|JGI1221J11331_1057751	Not Available	721	Open in IMG/M
3300000525\|JGI1221J11331_1062402	Not Available	680	Open in IMG/M
3300000525\|JGI1221J11331_1067077	Not Available	643	Open in IMG/M
3300000525\|JGI1221J11331_1074345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium algoriphilum	595	Open in IMG/M
3300000525\|JGI1221J11331_1080185	Not Available	562	Open in IMG/M
3300000525\|JGI1221J11331_1086293	Not Available	532	Open in IMG/M
3300000525\|JGI1221J11331_1087243	Not Available	528	Open in IMG/M
3300000525\|JGI1221J11331_1091869	Not Available	508	Open in IMG/M
3300001097\|JGIcombinedJ13537_10045885	All Organisms → Viruses → Predicted Viral	1127	Open in IMG/M
3300001097\|JGIcombinedJ13537_10068203	Not Available	844	Open in IMG/M
3300001097\|JGIcombinedJ13537_10073009	Not Available	802	Open in IMG/M
3300001097\|JGIcombinedJ13537_10073376	Not Available	800	Open in IMG/M
3300001097\|JGIcombinedJ13537_10075026	Not Available	786	Open in IMG/M
3300001097\|JGIcombinedJ13537_10076943	Not Available	772	Open in IMG/M
3300001097\|JGIcombinedJ13537_10088932	Not Available	693	Open in IMG/M
3300001097\|JGIcombinedJ13537_10090823	Not Available	683	Open in IMG/M
3300001097\|JGIcombinedJ13537_10111198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium algoriphilum	587	Open in IMG/M
3300001097\|JGIcombinedJ13537_10130590	Not Available	521	Open in IMG/M
3300001097\|JGIcombinedJ13537_10132902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium botulinum	514	Open in IMG/M
3300001097\|JGIcombinedJ13537_10134117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium algoriphilum	511	Open in IMG/M
3300023301\|Ga0209414_1008630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium estertheticum	3884	Open in IMG/M
3300023301\|Ga0209414_1011211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3272	Open in IMG/M
3300023301\|Ga0209414_1011631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	3193	Open in IMG/M
3300023301\|Ga0209414_1012712	All Organisms → Viruses → Predicted Viral	3010	Open in IMG/M
3300023301\|Ga0209414_1012767	All Organisms → Viruses → Predicted Viral	3001	Open in IMG/M
3300023301\|Ga0209414_1012913	Not Available	2980	Open in IMG/M
3300023301\|Ga0209414_1020911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	2161	Open in IMG/M
3300023301\|Ga0209414_1026014	All Organisms → Viruses → Predicted Viral	1861	Open in IMG/M
3300023301\|Ga0209414_1029180	All Organisms → cellular organisms → Bacteria → Proteobacteria	1718	Open in IMG/M
3300023301\|Ga0209414_1029941	All Organisms → Viruses → Predicted Viral	1686	Open in IMG/M
3300023301\|Ga0209414_1031244	Not Available	1634	Open in IMG/M
3300023301\|Ga0209414_1036187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium algoriphilum	1471	Open in IMG/M
3300023301\|Ga0209414_1039596	All Organisms → Viruses → Predicted Viral	1376	Open in IMG/M
3300023301\|Ga0209414_1045876	Not Available	1235	Open in IMG/M
3300023301\|Ga0209414_1046187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium algoriphilum	1228	Open in IMG/M
3300023301\|Ga0209414_1046462	All Organisms → Viruses → Predicted Viral	1223	Open in IMG/M
3300023301\|Ga0209414_1047197	Not Available	1209	Open in IMG/M
3300023301\|Ga0209414_1050935	Not Available	1142	Open in IMG/M
3300023301\|Ga0209414_1053789	Not Available	1097	Open in IMG/M
3300023301\|Ga0209414_1056882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium algoriphilum	1054	Open in IMG/M
3300023301\|Ga0209414_1057611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium algoriphilum	1044	Open in IMG/M
3300023301\|Ga0209414_1058466	All Organisms → Viruses → Predicted Viral	1033	Open in IMG/M
3300023301\|Ga0209414_1060577	All Organisms → Viruses → Predicted Viral	1007	Open in IMG/M
3300023301\|Ga0209414_1062812	Not Available	981	Open in IMG/M
3300023301\|Ga0209414_1066900	Not Available	937	Open in IMG/M
3300023301\|Ga0209414_1066964	Not Available	936	Open in IMG/M
3300023301\|Ga0209414_1067603	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300023301\|Ga0209414_1068901	Not Available	917	Open in IMG/M
3300023301\|Ga0209414_1077056	Not Available	845	Open in IMG/M
3300023301\|Ga0209414_1079225	Not Available	827	Open in IMG/M
3300023301\|Ga0209414_1080321	Not Available	818	Open in IMG/M
3300023301\|Ga0209414_1080469	Not Available	817	Open in IMG/M
3300023301\|Ga0209414_1080669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium algoriphilum	815	Open in IMG/M
3300023301\|Ga0209414_1084206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	789	Open in IMG/M
3300023301\|Ga0209414_1087766	Not Available	764	Open in IMG/M
3300023301\|Ga0209414_1089149	Not Available	755	Open in IMG/M
3300023301\|Ga0209414_1101691	Not Available	682	Open in IMG/M
3300023301\|Ga0209414_1106357	Not Available	658	Open in IMG/M
3300023301\|Ga0209414_1140154	Not Available	524	Open in IMG/M
3300023301\|Ga0209414_1143263	Not Available	514	Open in IMG/M
3300023301\|Ga0209414_1144963	Not Available	509	Open in IMG/M
3300023301\|Ga0209414_1147460	Not Available	501	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	100.00%

Habitat	Taxonomy	Distribution
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified → Hypersaline	100.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000405	Hypersaline microbial communities from Lake Vida, Antarctica - sample: Brine Hole Two 0.1-0.2 micron	Environmental	Open in IMG/M
3300000525	Hypersaline microbial communities from Lake Vida, Antarctica - Brine Hole Two >0.2 micron	Environmental	Open in IMG/M
3300001097	Saline microbial communities from Lake Vida, Antarctica (Lake Vida Brine Hole Two - Combined Assembly 2 samples, Mar 2013 Assem)	Environmental	Open in IMG/M
3300023301	Hypersaline microbial communities from Lake Vida, Antarctica - Brine Hole Two >0.2 micron (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LV_Brine_h2_0102DRAFT_10084811	3300000405	Hypersaline	MNNKEKALYTYATIQKRKAKENKAKFMDAEIYMKKR
LV_Brine_h2_0102DRAFT_10097992	3300000405	Hypersaline	MNNHDKALYTYAAIKKRKAKENRLKEQNIEIYLKKRLGKLGFIKNSAKVY*
LV_Brine_h2_0102DRAFT_10098287	3300000405	Hypersaline	MNNREKALYTYATIQKRKAKENKLKEQDIEIYLKKRLGKLGFIKNSAKVY*
LV_Brine_h2_0102DRAFT_10122252	3300000405	Hypersaline	LNNHEKALEMYAAIKKRKAKENRLKEQDIEIYLKKRLGKLGFIKNSAKVY*
LV_Brine_h2_0102DRAFT_10132465	3300000405	Hypersaline	MNNHDKALYTYAAIKKRKSKENKAKFMDAEIYMKKKLGKLSYIKSGK*
LV_Brine_h2_0102DRAFT_10148855	3300000405	Hypersaline	LNNHDKALEMYAAIKKRKAKENKAKFMDAEIYMKKRLGKLSYIKSGR*
LV_Brine_h2_0102DRAFT_10148971	3300000405	Hypersaline	MNNHDKALYTYAAIQKRKAKENKDKYMDAEIYMKKRLGKLSYIKSGK*
LV_Brine_h2_0102DRAFT_10173865	3300000405	Hypersaline	MNNHEKALYTYAAIQKRKAKENKLKEQDIEIYLKKRLGKLGFVKNSAKVY*
LV_Brine_h2_0102DRAFT_10219235	3300000405	Hypersaline	MNNHDKALYTYAAIKKRKAKENKLKEQDIEIYLKKRLGKLGFIKNSAKVY*
LV_Brine_h2_0102DRAFT_10226564	3300000405	Hypersaline	MNNHEKALYTYATIKKRKAKENKLKEQDIEIYLKKRLGKLGFIKNSAKVY*
LV_Brine_h2_0102DRAFT_10243382	3300000405	Hypersaline	MNNHEKALEMYAAIQKRKAKENKAKFMDAEIYMKKRLGKLGFIKNSAKVY*
LV_Brine_h2_0102DRAFT_10253025	3300000405	Hypersaline	MNNHEKALYTYAAIQKRKAKENKLKEQDIEIYLKKRLGKLGFIKNSAKVY*
LV_Brine_h2_0102DRAFT_10271113	3300000405	Hypersaline	MNNHDKALYTYAAIQKRKAKENKAKFMDAEIYMKKRLGKLSFIKSSK*
LV_Brine_h2_0102DRAFT_10324042	3300000405	Hypersaline	MNNHEKALEMYAAIQKRKAKENKAKFMDAEIYMKKRLGKLSYIKSSK*
LV_Brine_h2_0102DRAFT_10356334	3300000405	Hypersaline	MNNHDKALYTYAAIQKRKAKENKLKEQDIEIYLKKRLGKLGFIKNSAKVY*
LV_Brine_h2_0102DRAFT_10373972	3300000405	Hypersaline	MNNHEKALYTYATIQKRKAKENKAKFMDAEIYMKKRLGKLSFIKSGK*
LV_Brine_h2_0102DRAFT_10377942	3300000405	Hypersaline	MNNHEKALEMYAAIQKRKAKENKLKEQDIEIYLKKRLGKLGFIKNSAK
LV_Brine_h2_0102DRAFT_10384531	3300000405	Hypersaline	ALEMYAAIKKRKAKENKAKFMDAEIYMKKRLGKLSYIKSNK*
LV_Brine_h2_0102DRAFT_10399432	3300000405	Hypersaline	MNNHEKALEMYAAIQKRKAKENKLKEQDIEIYLKKRLGKLGFIKNSAKVY*
LV_Brine_h2_0102DRAFT_10439554	3300000405	Hypersaline	MNNHDKALEMYAAIKKRKAKENKAKFMDAEIYMKKRLGKLSFIKSGK*
LV_Brine_h2_0102DRAFT_10444974	3300000405	Hypersaline	MNNHDKALYTYAAIQKRKAKENKAKFMDAEIYMKKRLGKLSYIKSGK*
LV_Brine_h2_0102DRAFT_10445694	3300000405	Hypersaline	MNNHEKALEMYAAIQKRRAKENKAKYMDAEIYMKKRLGKLSYIKSGK*
LV_Brine_h2_0102DRAFT_10460522	3300000405	Hypersaline	MNNHEKALYTYAAIQKRKAKENKAKFMDTEIYMKKG*
LV_Brine_h2_0102DRAFT_10463622	3300000405	Hypersaline	MNNHEKALEMYAAIQKXKAKENKLKEQDIEIYLKKRLGKLGFIKNSAKVY*
LV_Brine_h2_0102DRAFT_10488374	3300000405	Hypersaline	MNNHEKALYTYATIQKRKAKENKAKFMDAEIYMKKRLGKIGFVKNSAKVH*
LV_Brine_h2_0102DRAFT_10492962	3300000405	Hypersaline	MNNXEKALYTYAAIQKRKAKEXKLXEQDIEIYLKKRLGKLGFIKNSAKVY*
LV_Brine_h2_0102DRAFT_10504232	3300000405	Hypersaline	MNNHEKALYTYATIQKRKAKENKLKEQDIEIYLKKRLGKLGFIKNSAKVY*
LV_Brine_h2_0102DRAFT_10506441	3300000405	Hypersaline	MNNHEKALYTYATIQKRKAKENKAKFMDAEIYMKKRLGKLSFIK
LV_Brine_h2_0102DRAFT_10515293	3300000405	Hypersaline	MNNHEKALYTYATIQKRKAKENKAKFMDAEIYMKKRLGKLSXIKSGK*
LV_Brine_h2_0102DRAFT_10539683	3300000405	Hypersaline	MNNHDKALEMYAAIKKRKAKENKLKEQDIEIYLKKRLGKLGFIKNSAKVY*
LV_Brine_h2_0102DRAFT_10558092	3300000405	Hypersaline	MGLNNHDKALEMYAAIKKRKAKENKAKFMDAEIYMKKRLGKLSYIKSGK*
LV_Brine_h2_0102DRAFT_10660043	3300000405	Hypersaline	MNNHEKALYTYAAIQKRKAKESKLKEQDIEIYLKKRLGKLGFIKNSAKVY*
LV_Brine_h2_0102DRAFT_10660092	3300000405	Hypersaline	MNNHEKALYTYAAIQKRKAKENKAKFMDAEIYMKKRLGKLSYIKSGK*
LV_Brine_h2_0102DRAFT_10753633	3300000405	Hypersaline	MNNHDKALEMYAAIKKRKAKENKAKFMDAEIYMKKRLGKLSYIKSGK*
LV_Brine_h2_0102DRAFT_10787691	3300000405	Hypersaline	AIQKRKAKENKLKEQDIEIYLKKRLGKLGFIKNSAKVY*
LV_Brine_h2_0102DRAFT_10807002	3300000405	Hypersaline	MNNHEKALYTYATIQKRKAEENKLKEQDIEIYLKKRLGKLGFIKNSAKVY*
JGI1221J11331_10204001	3300000525	Hypersaline	LNNHEKALYTYATIKKRKAKENKLKEQDIEIYLKKRLGKLGF
JGI1221J11331_10232214	3300000525	Hypersaline	MGLNNHDKALEMYAAIKKRKAKENKAKFMDAEIYMKKRLGKLSFIKSGK*
JGI1221J11331_10269732	3300000525	Hypersaline	MNNHEKALYTYATIQKRKAKENKAKFMDAEIYMKKRXGKLSYIKSGK*
JGI1221J11331_10433002	3300000525	Hypersaline	MNNHDKALYTYVAIQKRKAKENKLKEQDIEIYLKKRLGKLGFIKNSAKVY*
JGI1221J11331_10442711	3300000525	Hypersaline	LNNHEKALYTYAAIQKRKAKENKAKFMDAEIYMKKRLGKLSYIKSGK*
JGI1221J11331_10577511	3300000525	Hypersaline	MNNHEKALEMYAAIQKRRAKENKAKYMDAEIYMKKRLGK
JGI1221J11331_10624021	3300000525	Hypersaline	MNNHEKALYTYSAIKKRKAKENKLKEQDIEIYLKKRLGKLGFVKNSAKVY*
JGI1221J11331_10670771	3300000525	Hypersaline	NNHDKALYTYAAIKKRKAKENRLKEQNIEIYLKKRLGKLGFIKNSAKVY*
JGI1221J11331_10743451	3300000525	Hypersaline	MNNHEKALEMYAAIQKRKAKENKAKYMDAEIYMKKRLGKLSYIKSGK*
JGI1221J11331_10801852	3300000525	Hypersaline	MNNHEKALEMYAAIQKKKAKENKLKEQDIEIYLKKRLGKLGFIKNSAKVY*
JGI1221J11331_10862932	3300000525	Hypersaline	MNNHDKAIYTYAAIQKRKAKENKAKFMDAEIYMKKRLGKLSCIKSGK*
JGI1221J11331_10872431	3300000525	Hypersaline	EKALEMYAAIQKRKAKENKLKEQDIEIYLKKRLGKLGFIKNSAKVY*
JGI1221J11331_10918692	3300000525	Hypersaline	MNNHDKALYTYATIQKRKAKENKAKYMDAEIYMKKRLGK*
JGIcombinedJ13537_100458852	3300001097	Hypersaline	LNNHEKALEMYAAIKKRKAKENRLKEQDIEIYLKKRLGKLGF
JGIcombinedJ13537_100682032	3300001097	Hypersaline	MNNHEKALYTYATIQKRKAKENKAKFMDAEIYMKKRLGKLSYIKSNK*
JGIcombinedJ13537_100730092	3300001097	Hypersaline	MNNHDKALYTYAAIQKKKAKENKLKEQDIEIYLKKRLGKLGFIKNSAKVY*
JGIcombinedJ13537_100733761	3300001097	Hypersaline	TYAAIQKRKAKENKLKEQDIEIYLKKRLGKLGFIKNSAKVY*
JGIcombinedJ13537_100750263	3300001097	Hypersaline	RKAKENKLKEQDIEIYLKKRLGKLGFIKNSEKVY*
JGIcombinedJ13537_100769431	3300001097	Hypersaline	QYFIERGRVMNNHEKALYTYAAIQKRKAKENKAKFMDAEIYMKKRLGKLSYIKSGK*
JGIcombinedJ13537_100889323	3300001097	Hypersaline	MNNKEKALYTYATIQKRKTKENKLKEQDIEIYFKKRLGKLGFIKNSAKVY*
JGIcombinedJ13537_100908234	3300001097	Hypersaline	MNNREKALYTYATIQKRKAKENKLKEQDIEIYFKKRLGKLGFVKNSAKVY*
JGIcombinedJ13537_101111981	3300001097	Hypersaline	MNNHEKALEMYAAIQKRKAKENKLKEQDIEIYLKKRLGKLGFIKNSAKAY*
JGIcombinedJ13537_101305903	3300001097	Hypersaline	MNNHDKALEMYAAIKKRKAKENKAKFMDAEIYMKKRXGKLSYIKSXK*
JGIcombinedJ13537_101329022	3300001097	Hypersaline	IQKRKAKENKLKEQDIEIYLKKRLGKLGFIKNSAKVY*
JGIcombinedJ13537_101341171	3300001097	Hypersaline	MNNHDKALEMYAAIKKRKAKENKAKFMDAEIYMKKRLGK*
Ga0209414_10086302	3300023301	Hypersaline	MNNHDKALYTYAAIQKRKAKENKLKEQDIEIYFKKRLGKLGFIKNSAKVY
Ga0209414_10112113	3300023301	Hypersaline	LNNHEKALYTYAAIQKRKAKENKAKYMDAEIYMKKRLGK
Ga0209414_10116313	3300023301	Hypersaline	MNNHEKALEMYAAIQKRKAKENKLKEQDIEIYLKKRLGKLGFIKNSAKVF
Ga0209414_10127127	3300023301	Hypersaline	MNNHDKALEMYAAIKKRKAKENKAKFMDAEIYMKKRLGKLSYIKSGK
Ga0209414_10127675	3300023301	Hypersaline	LNNHDKALEMYAAIKKRKAKENKAKFMDAEIYMKKRLGKLSYIKSGR
Ga0209414_10129132	3300023301	Hypersaline	MNNHEKALYTYATIKKRKAKENKLKEQDIEIYLKKRLGKLGFIKNSAKVY
Ga0209414_10209112	3300023301	Hypersaline	MNNHEKALYTYAAIQKRKAKENKLKEQDIEIYLKKRLGKLGFIKNSAKVY
Ga0209414_10260143	3300023301	Hypersaline	MNNHEKALEMYAAIQKRKAKENKAKFMDAEIYMKKRLGKLSFIKSSK
Ga0209414_10291805	3300023301	Hypersaline	MNNHDKALYTYAAIKKRKSKENKAKFMDAEIYMKKKLGKLSYIKSGK
Ga0209414_10299412	3300023301	Hypersaline	MNNHEKALEMYAAIQKRRAKENKAKYMDAEIYMKKRLGKLSFIKNGI
Ga0209414_10312444	3300023301	Hypersaline	MNNHDKALYTYAAIQKRKAKENKLKEQDIEIYLKKRLGKLGFIKNSAKVY
Ga0209414_10361873	3300023301	Hypersaline	MNNHEKALYTYATIQKRKAKENKAKFMDAEIYMKKRLGKLSYIKSGK
Ga0209414_10395962	3300023301	Hypersaline	MNNHEKALYTYAAIQKRKAKESKLKEQDIEIYLKKRLGKLGFIKNSAKVY
Ga0209414_10458766	3300023301	Hypersaline	MNNHEKALYTYAAIQKRKAKENKAKFMDAEIYMKKRLGKLSYIKSGK
Ga0209414_10461872	3300023301	Hypersaline	MNNHEKALYTYATIQKRKAEENKLKEQDIEIYLKKRLGKLGFIKNSAKVY
Ga0209414_10464624	3300023301	Hypersaline	MNNHEKALYTYATIQKRKAKENKAKFMDAEIYMKKRLGKLSFIKSGK
Ga0209414_10471971	3300023301	Hypersaline	GTLNNHEKALYTYAAIKKRKAKENRLKEQNIEIYLKKRLGKLGFIKNSAKVY
Ga0209414_10509354	3300023301	Hypersaline	MNNHDKAIYTYAAIQKRKAKENKAKFMDAEIYMKKRLGKLSCIKSGK
Ga0209414_10537892	3300023301	Hypersaline	MNNHDKALEMYAAIKKRKAKENKAKFMDAEIYMKKRLGKLSYIKSNK
Ga0209414_10568822	3300023301	Hypersaline	MNNHEKALEMYAAIQKRKAKENKAKYMDAEIYMKKRLGKIGFVKNSAKVY
Ga0209414_10576112	3300023301	Hypersaline	MNNHEKALYTYAAIQKRKAKENKAKFMDAEIYMKKRLGKLSCIKS
Ga0209414_10584662	3300023301	Hypersaline	LNNHEKALEMYAAIKKRKAKENRLKEQDIEIYLKKRLGKLGFIKNSAKVY
Ga0209414_10605773	3300023301	Hypersaline	MNNHEKALYTYAAIQKRKAKENKLKEQDIEIYLKKRLGKLGFVKNSAKVY
Ga0209414_10628121	3300023301	Hypersaline	MNNHEKALYTYATIQKRKAKENKAKFMDAEIYMKKRLGKIGFVKNSAKVH
Ga0209414_10669001	3300023301	Hypersaline	MNNHEKALYTYATIQKRKAKENKDKYMDAEIYMKKRLGKLSYIKSGK
Ga0209414_10669644	3300023301	Hypersaline	MNNHDKALEMYAAIQKRKAKENKAKFMDAEIYMKKRLGKLSYIKSGK
Ga0209414_10676031	3300023301	Hypersaline	MNNHDKALEMYAAIKKRKAKENKAKFMDAEIYMKKRLGKLSFIKSGK
Ga0209414_10689013	3300023301	Hypersaline	MNNKEKALYTYATIKKRKAKENKLKEQDIEIYLKKRLGKLGFIKNSAKVY
Ga0209414_10770562	3300023301	Hypersaline	MGLNNHDKALEMYAAIKKRKAKENKAKFMDAEIYMKKRLGKLSYIKSGK
Ga0209414_10792251	3300023301	Hypersaline	MNNHDKALYTYATIQKRKAKENKAKYMDAEIYMKKRLGK
Ga0209414_10803214	3300023301	Hypersaline	YAAIQKRKAKENRLKEQDIEIYLKKRLGKLGFVKNSAKVY
Ga0209414_10804692	3300023301	Hypersaline	MNNHEKALEMYAAIQKRKAKENKAKFMDAEIYMKKRLGKLSFIKSGK
Ga0209414_10806691	3300023301	Hypersaline	MNNHEKALEMYATIQKRKAKENKLKEQDIEIYLKKRLGK
Ga0209414_10842062	3300023301	Hypersaline	MNNHDKALYTYAAIQKRKAKENKAKFMDAEIYMKKRLGKLSFIKSSK
Ga0209414_10877663	3300023301	Hypersaline	MNNKEKALYTYAAIQKRKAKENKLKEQDIEIYLKKRLGKLGFIKNSAKVY
Ga0209414_10891493	3300023301	Hypersaline	MNNHEKALEMYAAIQKRKAKENKLKEQDIEIYLKKRLGKLGFIKNSAKVY
Ga0209414_11016913	3300023301	Hypersaline	MNNREKALYTYATIQKRKAKENKAKFMDAEIYMKKRLGKLSFIKSGK
Ga0209414_11063571	3300023301	Hypersaline	LEMYAAIQKRKAKENKLKEQDIEIYLKKRLGKLGFIKNSAKVY
Ga0209414_11401541	3300023301	Hypersaline	KRKAKENKLKEQDIEIYLKKRLGKLGFIKNSAKVY
Ga0209414_11432631	3300023301	Hypersaline	MNNKDKALYTYAAIQKRKAKENKLKEQDIEIYLKKRLGKLGFIKNSAKLY
Ga0209414_11449632	3300023301	Hypersaline	MNNHDKALEMYAAIQKRKAKENKAKYMDAEIYMKKRLGKLSYIKSGK
Ga0209414_11474602	3300023301	Hypersaline	MNNHDKALYTYAAIQKKKAKENKLKEQDIEIYLKKRLGKLGFIKNSAKVY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F098346

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences