Metagenome Family F098305

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F098305
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	102 residues
Representative Sequence	MNRRIGRQRGFLGLIVILIALLIVAWLSMDALKAYGVMSGVGPSPKSAPAAEPARGPGVAGTESRDVTTATPAPIDALDKARGLESAVREQAADQSRRIDEVTK
Number of Associated Samples	80
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.88 %
% of genes near scaffold ends (potentially truncated)	36.54 %
% of genes from short scaffolds (< 2000 bps)	75.00 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (54.808 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen (47.115 % of family members)
Environment Ontology (ENVO)	Unclassified (26.923 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.462 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 40.91% β-sheet: 0.00% Coil/Unstructured: 59.09%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF02666	PS_Dcarbxylase	28.85
PF01450	IlvC	25.96
PF07991	IlvN	13.46
PF13710	ACT_5	4.81
PF01066	CDP-OH_P_transf	3.85
PF00892	EamA	3.85
PF02775	TPP_enzyme_C	1.92
PF10369	ALS_ss_C	1.92
PF00535	Glycos_transf_2	0.96
PF00132	Hexapep	0.96
PF02350	Epimerase_2	0.96
PF06271	RDD	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0059	Ketol-acid reductoisomerase	Amino acid transport and metabolism [E]	78.85
COG0688	Phosphatidylserine decarboxylase	Lipid transport and metabolism [I]	28.85
COG0499	S-adenosylhomocysteine hydrolase	Coenzyme transport and metabolism [H]	13.46
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	3.85
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	3.85
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	3.85
COG0381	UDP-N-acetylglucosamine 2-epimerase	Cell wall/membrane/envelope biogenesis [M]	0.96
COG0707	UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase	Cell wall/membrane/envelope biogenesis [M]	0.96
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.65 %
Unclassified	root	N/A	41.35 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.65 %
Unclassified	root	N/A	41.35 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.81 %
Unclassified	root	N/A	41.35 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	3.85 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	52.88 %
Unclassified	root	N/A	41.35 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	3.85 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	50.00 %
Unclassified	root	N/A	41.35 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	3.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.35 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	9.62 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	3.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.92 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.35 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	3.85 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.92 %
Nitrosomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae	0.96 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.35 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	3.85 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.92 %
Nitrosospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira	0.96 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.35 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	3.85 %
Mesorhizobium delmotii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium delmotii	1.92 %
Nitrosospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira	0.96 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.35 %
Nematoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda	3.85 %
Mesorhizobium delmotii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium delmotii	1.92 %
Nitrosospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira	0.96 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.35 %
Chromadorea	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea	3.85 %
Mesorhizobium delmotii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium delmotii	1.92 %
Nitrosospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira	0.96 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.35 %
Rhabditida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida	3.85 %
Mesorhizobium delmotii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium delmotii	1.92 %
Nitrosospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira	0.96 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.35 %
Tylenchina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina	3.85 %
Mesorhizobium delmotii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium delmotii	1.92 %
Nitrosospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira	0.96 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.35 %
Panagrolaimomorpha	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha	3.85 %
Mesorhizobium delmotii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium delmotii	1.92 %
Nitrosospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira	0.96 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.35 %
Strongyloidoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea	3.85 %
Mesorhizobium delmotii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium delmotii	1.92 %
Nitrosospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira	0.96 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.35 %
Strongyloididae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae	3.85 %
Mesorhizobium delmotii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium delmotii	1.92 %
Nitrosospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira	0.96 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.35 %
Parastrongyloides	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides	3.85 %
Mesorhizobium delmotii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium delmotii	1.92 %
Nitrosospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira	0.96 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.35 %
Parastrongyloides trichosuri	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	3.85 %
Mesorhizobium delmotii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium delmotii	1.92 %
Nitrosospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira	0.96 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.96 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459015\|G14TP7Y02HMEBZ	Not Available	736	Open in IMG/M
3300001213\|JGIcombinedJ13530_103754206	Not Available	645	Open in IMG/M
3300002128\|JGI24036J26619_10136042	Not Available	513	Open in IMG/M
3300005093\|Ga0062594_101346406	Not Available	720	Open in IMG/M
3300005331\|Ga0070670_100189872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1785	Open in IMG/M
3300005338\|Ga0068868_100000956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	19655	Open in IMG/M
3300005354\|Ga0070675_101404560	Not Available	644	Open in IMG/M
3300005355\|Ga0070671_100102418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2403	Open in IMG/M
3300005436\|Ga0070713_101310863	Not Available	702	Open in IMG/M
3300005445\|Ga0070708_100000095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	58224	Open in IMG/M
3300005456\|Ga0070678_100000282	All Organisms → cellular organisms → Bacteria → Proteobacteria	23627	Open in IMG/M
3300005615\|Ga0070702_100279219	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300005618\|Ga0068864_100837423	Not Available	906	Open in IMG/M
3300005718\|Ga0068866_10140656	All Organisms → cellular organisms → Bacteria	1385	Open in IMG/M
3300005719\|Ga0068861_100081716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2531	Open in IMG/M
3300005841\|Ga0068863_100011826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	8437	Open in IMG/M
3300006057\|Ga0075026_100180958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1099	Open in IMG/M
3300009177\|Ga0105248_10182380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2365	Open in IMG/M
3300013297\|Ga0157378_10121952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2404	Open in IMG/M
3300013306\|Ga0163162_12455099	Not Available	599	Open in IMG/M
3300014325\|Ga0163163_10515017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1258	Open in IMG/M
3300015371\|Ga0132258_13446952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1085	Open in IMG/M
3300015371\|Ga0132258_13833285	Not Available	1024	Open in IMG/M
3300017792\|Ga0163161_10010634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6372	Open in IMG/M
3300018078\|Ga0184612_10015061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3945	Open in IMG/M
3300018083\|Ga0184628_10099513	Not Available	1495	Open in IMG/M
3300018481\|Ga0190271_10007359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	7490	Open in IMG/M
3300021081\|Ga0210379_10226223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	809	Open in IMG/M
3300021344\|Ga0193719_10405884	Not Available	560	Open in IMG/M
3300025903\|Ga0207680_10005666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5978	Open in IMG/M
3300025925\|Ga0207650_10417938	Not Available	1112	Open in IMG/M
3300025931\|Ga0207644_10079989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2413	Open in IMG/M
3300025931\|Ga0207644_10125402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1959	Open in IMG/M
3300025936\|Ga0207670_10661816	Not Available	862	Open in IMG/M
3300025960\|Ga0207651_10120796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1986	Open in IMG/M
3300026118\|Ga0207675_100103256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2686	Open in IMG/M
3300026320\|Ga0209131_1016619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4481	Open in IMG/M
3300027902\|Ga0209048_10056347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3179	Open in IMG/M
3300028380\|Ga0268265_10241486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1594	Open in IMG/M
3300028650\|Ga0302170_10099037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	743	Open in IMG/M
3300028651\|Ga0302171_10089806	Not Available	738	Open in IMG/M
3300028652\|Ga0302166_10068032	Not Available	765	Open in IMG/M
3300028665\|Ga0302160_10038626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	939	Open in IMG/M
3300028665\|Ga0302160_10048406	Not Available	856	Open in IMG/M
3300028674\|Ga0302161_10168867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	575	Open in IMG/M
3300028739\|Ga0302205_10144305	Not Available	609	Open in IMG/M
3300028741\|Ga0302256_10060078	Not Available	978	Open in IMG/M
3300028743\|Ga0302262_10068153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1225	Open in IMG/M
3300028743\|Ga0302262_10239227	Not Available	618	Open in IMG/M
3300028777\|Ga0302290_10078133	Not Available	841	Open in IMG/M
3300028855\|Ga0302257_1109616	Not Available	615	Open in IMG/M
3300028856\|Ga0302295_1026591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1134	Open in IMG/M
3300028861\|Ga0302259_1139739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	599	Open in IMG/M
3300028868\|Ga0302163_10153256	Not Available	617	Open in IMG/M
3300028870\|Ga0302254_10125901	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	939	Open in IMG/M
3300029923\|Ga0311347_10201469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1224	Open in IMG/M
3300029980\|Ga0302298_10045991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1292	Open in IMG/M
3300029984\|Ga0311332_10174322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1608	Open in IMG/M
3300029984\|Ga0311332_10826916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	739	Open in IMG/M
3300029984\|Ga0311332_11340860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	578	Open in IMG/M
3300029987\|Ga0311334_10008134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	7106	Open in IMG/M
3300029987\|Ga0311334_11337396	Not Available	603	Open in IMG/M
3300029989\|Ga0311365_11104064	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	684	Open in IMG/M
3300029989\|Ga0311365_11920204	Not Available	506	Open in IMG/M
3300030000\|Ga0311337_10885602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	776	Open in IMG/M
3300030002\|Ga0311350_10073783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2981	Open in IMG/M
3300030014\|Ga0302175_10069015	Not Available	781	Open in IMG/M
3300030014\|Ga0302175_10072762	Not Available	763	Open in IMG/M
3300030014\|Ga0302175_10116090	Not Available	618	Open in IMG/M
3300030050\|Ga0302255_1027100	Not Available	1099	Open in IMG/M
3300030050\|Ga0302255_1060986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium delmotii	748	Open in IMG/M
3300030052\|Ga0302217_10096580	Not Available	670	Open in IMG/M
3300030114\|Ga0311333_10043941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3174	Open in IMG/M
3300030114\|Ga0311333_10157086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1742	Open in IMG/M
3300030114\|Ga0311333_10311220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1255	Open in IMG/M
3300030294\|Ga0311349_11299602	Not Available	677	Open in IMG/M
3300030294\|Ga0311349_11851161	Not Available	556	Open in IMG/M
3300030339\|Ga0311360_10761205	Not Available	770	Open in IMG/M
3300030339\|Ga0311360_11179622	Not Available	602	Open in IMG/M
3300030838\|Ga0311335_10066342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2274	Open in IMG/M
3300030838\|Ga0311335_10107365	Not Available	1805	Open in IMG/M
3300031232\|Ga0302323_100261790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1777	Open in IMG/M
3300031722\|Ga0311351_10125096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1960	Open in IMG/M
3300031722\|Ga0311351_10545369	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	881	Open in IMG/M
3300031726\|Ga0302321_100176136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2218	Open in IMG/M
3300031902\|Ga0302322_100215568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2107	Open in IMG/M
3300031902\|Ga0302322_100410828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium delmotii	1555	Open in IMG/M
3300031902\|Ga0302322_100570187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1328	Open in IMG/M
3300031918\|Ga0311367_10048648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4569	Open in IMG/M
3300031918\|Ga0311367_10272765	Not Available	1758	Open in IMG/M
3300032143\|Ga0315292_11043024	Not Available	678	Open in IMG/M
3300032164\|Ga0315283_12121105	Not Available	555	Open in IMG/M
3300032256\|Ga0315271_10121396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2015	Open in IMG/M
3300032256\|Ga0315271_10478225	Not Available	1053	Open in IMG/M
3300032256\|Ga0315271_11572379	Not Available	566	Open in IMG/M
3300032397\|Ga0315287_11135701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	903	Open in IMG/M
3300032397\|Ga0315287_11518514	Not Available	757	Open in IMG/M
3300034115\|Ga0364945_0137281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	730	Open in IMG/M
3300034115\|Ga0364945_0287202	Not Available	512	Open in IMG/M
3300034127\|Ga0370489_0002293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira	4160	Open in IMG/M
3300034129\|Ga0370493_0002193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5042	Open in IMG/M
3300034149\|Ga0364929_0296270	Not Available	552	Open in IMG/M
3300034156\|Ga0370502_0156017	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	729	Open in IMG/M
3300034358\|Ga0370485_0050080	Not Available	1088	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.92%
Host-Associated	Host-Associated	22.12%
Engineered	Engineered	0.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.42%
Plants	Host-Associated → Plants	22.12%
Aquatic	Environmental → Aquatic	12.50%
Solid Waste	Engineered → Solid Waste	0.96%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	49.04%
Soil	Environmental → Terrestrial → Soil	12.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.54%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.62%
Freshwater	Environmental → Aquatic → Freshwater	8.65%
Sediment	Environmental → Aquatic → Sediment	2.88%
Floodplain	Environmental → Terrestrial → Floodplain	2.88%
Marine	Environmental → Aquatic → Marine	0.96%
Roots	Host-Associated → Plants → Roots	0.96%
Grass	Engineered → Solid Waste → Grass	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	49.04%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.69%
Lake	Environmental → Aquatic → Freshwater → Lake	6.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	4.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.85%
Loam	Environmental → Terrestrial → Soil → Loam	3.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.88%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.96%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.96%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.96%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.96%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.96%
Composting	Engineered → Solid Waste → Grass → Composting	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	49.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.69%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	6.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.88%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.88%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.96%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.96%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.96%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.96%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	47.12%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	6.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.81%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	3.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.88%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.92%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.96%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.96%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.96%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.96%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028650	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_1	Environmental	Open in IMG/M
3300028651	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_2	Environmental	Open in IMG/M
3300028652	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_3	Environmental	Open in IMG/M
3300028665	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_3	Environmental	Open in IMG/M
3300028674	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_1	Environmental	Open in IMG/M
3300028739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E1_3	Environmental	Open in IMG/M
3300028741	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_4	Environmental	Open in IMG/M
3300028743	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_4	Environmental	Open in IMG/M
3300028777	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_3	Environmental	Open in IMG/M
3300028855	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_4	Environmental	Open in IMG/M
3300028856	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N2_4	Environmental	Open in IMG/M
3300028861	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_4	Environmental	Open in IMG/M
3300028868	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_3	Environmental	Open in IMG/M
3300028870	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_4	Environmental	Open in IMG/M
3300029923	II_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029980	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_3	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030014	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_3	Environmental	Open in IMG/M
3300030050	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_4	Environmental	Open in IMG/M
3300030052	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N3_3	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030339	III_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031722	II_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034127	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_16	Environmental	Open in IMG/M
3300034129	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_16	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034156	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_01D_18	Environmental	Open in IMG/M
3300034358	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_01D_16	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4PV_00746580	2170459015	Switchgrass, Maize And Mischanthus Litter	MDRRIGRQRGFLGLIVLLVALLIVAWLSMDALKAYGVMSGLGPAPKFAPAAEPARGPDVVGTDSQEVTTVTPAPMNALDKARGLESAVREQAADQSRRIDE
JGIcombinedJ13530_1037542062	3300001213	Wetland	MNRRIGRQRGFLGLVVILIALLIVAWLAMDGLKQYGMLSGAAPPTKAATAPERVRGPGAGVTEAAPDVSTATPAPMDALGKARGLEGAVREQAAENARRIDEGTK*
JGI24036J26619_101360422	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	RGFLGLIVILIALLIVAWLSMDALKAYGVMSGVGPAPKSVPAVEPARGPGVAGTDSREVTSATPAPMNALDKARGLESAVREQAADQSRRIDDATK*
Ga0062594_1013464061	3300005093	Soil	MNRRIGRQRGFLGLIVILIALLIVAWLSMDALKAYGVMSGVGPAPKSVPAVEPARGPGVAGTDSREVTSATPAPMNALDKARGLESAVREQAADQSRRIDDATK*
Ga0070670_1001898722	3300005331	Switchgrass Rhizosphere	MNRRIGRQRGFLGLIVILIALLIVAWLSMDALKAYGVMSGVGPSSSKSAPAAEPARGPGVAGTDSREVSTVTPAPMDALDKVRGLESAVREQAADQSRRIDEVTK*
Ga0068868_10000095616	3300005338	Miscanthus Rhizosphere	MNRRIGRQRGFLGLIVILIALLIVAWLSMDALKAYGVMSGVGPAPKSVPAVEPARGPGVAGTDSREVTTATPAPMNALDKARGLESAVREQAADQSRRIDDATK*
Ga0070675_1014045601	3300005354	Miscanthus Rhizosphere	MYRRIGRQRGFLGLIVILVALLIVAWLSMDALKAYGVVSGVGPPPKSALGAEPARGPGIAGTDSREVSTATPAPMDALDKARGLESAVREQAADQ
Ga0070671_1001024181	3300005355	Switchgrass Rhizosphere	MNRRIGRQRGFLGLVVILIALLIVAWLSMDALKAYGVMSGVGPSPKSAPAAEPARGPGVAGTESRDVTTATPAPIDALDKARGLESAVREQAADQSRRIDEVTK*
Ga0070713_1013108632	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRRHHGRQRGWVGLVVILIALLIVAWLSMDALKQYGMMSGVGPADKTAPATERVRGPGVGVTEASPDVTTTTPAPINALERARGVEGMVKDQAAENAKRIDDATK*
Ga0070708_1000000953	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRMRSDQRGWVGLLAILIALAIVAWLSKDALKQYGLLSGLEPSTKAAPATGGVRGPGVGTTEAPADLSTATPAPINALERARAVEGMVKEQAADNARRIDDATK*
Ga0070678_10000028222	3300005456	Miscanthus Rhizosphere	MNRRIGRQRGFLGLIVILIALLIVAWLSVDALKAYGVMSGVGPAPKSVPAVEPARGPGVAGTDSREVTTATPAPMNALDKARGLESAVREQAADQSRRIDDATK*
Ga0070702_1002792192	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MNRRIGRQRGFLGLIVILIALLIVAWLSMDALKAYGVMSGVGPAPKSVPAVEPARGPGVAGTDSREVTSATPAPMNALDKARGLESAVREQA
Ga0068864_1008374232	3300005618	Switchgrass Rhizosphere	MNRRIGRQRGFLGLIVILIALLIVAWLSMDALKAYGVMSGVGPSSSKSAPAAEPARGPGVAGTDSREVSTVTPAPMDALDKARGLESAVREQAADQSRRIDEVTK*
Ga0068866_101406561	3300005718	Miscanthus Rhizosphere	MNRRIGRQRGFLGLIVILIALLIVAWLSMDALKAYGVMSGVGPAPKSVPAVEPARGPCVAGTDSREVTSATPAPMNALDKARGLESAVREQAA
Ga0068861_1000817161	3300005719	Switchgrass Rhizosphere	MNRRIGRQRGFLGLIVILIALLIVAWLSVDALKAYGVMSGVGPAPKSVPAVEPARGPGVAGTDSREVTSATPAPMNALDKARGLESAVREQAADQSRRIDDATK*
Ga0068863_1000118261	3300005841	Switchgrass Rhizosphere	MNRRIGRQRGFLGLIVILIALLIVAWLSMDALKAYGVMSGVGPAPKSVPAVEPARGPGVAGTDSREVTSATPAPMNALDKARGLESAVREQAADQSRRIDDA
Ga0075026_1001809582	3300006057	Watersheds	MGMDRRIGRQGGWVGLIVILLALVIVAWLSKDALKKYGLMSDLEKQPKATSTTESVRGAGIGVSGAAPDITTATPAPLNALEKARGVEGMLKEQAAEQSRRIDEGTK*
Ga0105248_101823802	3300009177	Switchgrass Rhizosphere	MNRRIGRQRGFLGLIVILIALLIVAWLSMAALKAYGVMSGVGPAPKSVPAVEPARGPGVAGTDSREVTSATPAPMNALDKARGLESAVREQAADQSRRIDDATK*
Ga0157378_101219523	3300013297	Miscanthus Rhizosphere	MNRRIGRQRGFLGLIVILIALLIVAWLSVDALKAYGVMSRVGPAPKSVPAVEPARGPGVAGTDSREVTSATPAPMNALDKARGLESAVREQAADQSRRIDDATK*
Ga0163162_124550991	3300013306	Switchgrass Rhizosphere	MNRRIGRQRGFLGLIVILIALLIVAWLSMDALKAYGVMSGVGPSPKSAPAAEPARGPGVAGTESRDVTTATPAPIDALDKARGL
Ga0163163_105150171	3300014325	Switchgrass Rhizosphere	RRIGRQRGFLGLIVILIALLIVAWLSMDALKAYGVMSGVGPAPKSVPAVEPARGPGVAGTDSREVTTATPAPMNALDKARGLESAVREQAADQSRRIDDATK*
Ga0132258_134469522	3300015371	Arabidopsis Rhizosphere	MNGRIGRQRGFLGLIVVLIALLIVAWLSMDALKAYGVMSGAGPNPKSAPAAESARGPGIAGTDSPEVTTVTPAPMNALDKARGLESAVREQAADQARRIDEATK*
Ga0132258_138332852	3300015371	Arabidopsis Rhizosphere	LGLIVLLIALLIVAWLSMDALKEYGVMSGVGPTPKAAPAAEPARGPGIAGTDSREVTTATPAPMSALDKAHGLEGVVREQAADQSRRIDEATK*
Ga0163161_100106346	3300017792	Switchgrass Rhizosphere	MNRRIGRQRGFLGLIVILIALLIVAWLSMDALKAYGVMSGVGPAPKSVPAVEPARGPGVAGTDSREVTSATPAPMNALDKARGLESAVRAPAADQSRRIDDATK
Ga0184612_100150614	3300018078	Groundwater Sediment	MRRRQRGWVGLVAILIALLIVAWLSMDALKQYGLGPTVKPVPAAERARGPGVGVTESSPDITTATPAPLEALQRARGVESMVKQQAAENAKRIDDATR
Ga0184628_100995132	3300018083	Groundwater Sediment	LDRLIGRQRGFLGLIVILVALLIVAWLSMDALKAYGVMSGVGPSPKPAPAAEPARGPGIAGTDSREITPATPAPMNALDKARGLESAVREQAADQSRRIDEATK
Ga0190271_100073594	3300018481	Soil	LDRLIGRQRGFLGLIVILIALLIVAWLSMDALKSYGVMSGAGPGPRPAPVAEPARGPGIAGTDSQEVTTATPAPMNALDKARGVESAVREQAADQSRRIDEVTK
Ga0210379_102262232	3300021081	Groundwater Sediment	MNRRIGRQRGFLGLIVILIALLIVAWLSMDALKEYGVMSGTGPSPKSAPAAERARGPGVGSSESREVPTATPAPVNALDKARGLEGAVREQAADQSQRIDEATK
Ga0193719_104058842	3300021344	Soil	MRQRIGRQRGWVGLVAILIALLIVAWLSMDALKQYGLMSGLGPTVKPVPAAERVRGPGAGVTGASPDVTTATPAPFEALERARGVEGMVKEQAAENARRIDDATK
Ga0207680_100056667	3300025903	Switchgrass Rhizosphere	MNRRIGRQRGFLGLIVILIALLIVAWLSMDALKAYGVMSGVGPAPKSVPAVEPARGPGVAGTDSREVTSATPAPMNALDKARGLESAVREQAADQSRRIDDATK
Ga0207650_104179382	3300025925	Switchgrass Rhizosphere	MNRRIGRQRGFLGLIVILIALLIVAWLSMDALKAYGVMSGVGPSSSKSAPAAEPARGPGVAGTDSREVSTVTPAPMDALDKVRGLESAVREQAADQSRRIDEVTK
Ga0207644_100799891	3300025931	Switchgrass Rhizosphere	MNRRIGRQRGFLGLIVILIALLIVAWLSMDALKAYGVMSGVGPSPKSAPAAEPARGPGVAGTESRDVTTATPAPIDALDKARGLESAVREQAADQSRRIDEVTK
Ga0207644_101254023	3300025931	Switchgrass Rhizosphere	MNRRIGRQRGFLGLIVILIALLIVAWLSMDALKAYGVMSGVGPAPKSVPAVEPARGPGVAGTDSREVTTATPAPMNALDKARGLESAVREQAADQSRRIDDATK
Ga0207670_106618162	3300025936	Switchgrass Rhizosphere	IVILIALLIVAWLSMDALKAYGVMSGVGPAPKSVPAVEPARGPGVAGTDSREVTSATPAPMNALDKARGLESAVREQAADQSRRIDDATK
Ga0207651_101207962	3300025960	Switchgrass Rhizosphere	MYRRIGRQRGFLGLIVILIALLIVAWLSMDALKAYGVMSGVGPAPKSVPAVEPARGPGVAGTDSREVTSATPAPMNALDKARGLESAVREQAADQSRRIDDATK
Ga0207675_1001032564	3300026118	Switchgrass Rhizosphere	MNRRIGRQRGFLGLIVILIALLIVAWLSVDALKAYGVMSGVGPAPKSVPAVEPARGPGVAGTDSREVTSATPAPMNALDKARGLESAVREQAADQSRRIDDATK
Ga0209131_10166192	3300026320	Grasslands Soil	VRTNVSRQRGWVGLLAILIALAIVAWLSKDALKQYGLLSGLEPSTKAVPATERVRGPGLGVSEAPADLSTATPAPINALERARAVEGMVKEQAADNAKRIDDATK
Ga0209048_100563474	3300027902	Freshwater Lake Sediment	MTGMHRRIGRQGGWVGLIVILLALVIVAWLSKDALKQYGLMSGLGTAAKTAPAAERVRGAGVGVTEASPDLSSAAPAPLNALERARGVEGMVKEQAAEQSRRIDEGTK
Ga0268265_102414861	3300028380	Switchgrass Rhizosphere	MNRRIGRQRGFLGLIVILIALLIVAWLSMDALKAYGVMSGVGPAPKSVPAVEPARGPGVAGTDSREVTSATPAPMNALDKARGLESA
Ga0302170_100990372	3300028650	Fen	MKRRIGRQRGFLGLVVILIGLLIVAWLSMDALKQYGMPTGTAAPAKVAPATERMRGPGEGGTQAAPDVTTVTPAPMDALGKARGLENAVREQAAETSRRIDEGSK
Ga0302171_100898062	3300028651	Fen	LVVILIALLIVAWLSMDALKQYGMLPGAAAPSKSAPASERVRGPGPGVTEASPDVTTVTPAPLDALGKARGLESAVREQAAETSRRIDEGSK
Ga0302166_100680322	3300028652	Fen	MGRRRGRQRGFLGLVVILIALLIVAWLSMDALKQYGMLPGAAAPSKSAPASERVRGPGPGVTEASPDVTTVTPAPLDALGKARGLESAVREQAAETSRRIDEGSK
Ga0302160_100386262	3300028665	Fen	VTGMHRRIGRQGGWVGLIVILLALAIVAWLSKDALKQYGLMSGLGTPPKASQAAERVRGPGVGVTEASPDLSTATPAPMNALEKARGVESMVKEQAAEQSRRIDEGTK
Ga0302160_100484062	3300028665	Fen	RRRGRQRGFLGLVVILIALLIVAWLSMDALKQYGMLPGAAAPSKSAPASERVRGPGPGVTEASPDVTTVTPAPLDALGKARGLESAVREQAAETSRRIDEGSK
Ga0302161_101688672	3300028674	Fen	MGRRRGRQGGFLGLVVILIALLIVAWLSMDALKQYGMLPGAAAPSKSAPASERVRGPGPGVTEASPDVTTVTPAPLDALGKARGLESAVREQAAETSRRIDEGSK
Ga0302205_101443051	3300028739	Fen	TRRIGRQRGFLGLVVILIALLIVAWLSMDALKQYGMLSGTSAPAKPAPASERVRGPGEGVTQAAPDVTTVTPAPMDALSKARGLENAVKEQATETSRRIDEGSK
Ga0302256_100600782	3300028741	Fen	RGRQRGFLGLVVILIALLIVAWLSMDALKQYGMLPGAAAPSKSAPASERVRGPGPGVTEASPDVTTVTPAPLDALGKARGLESAVREQAAETSRRIDEGSK
Ga0302262_100681531	3300028743	Fen	GRQGGWVGLIVILLALAIVAWLSKDALKQYGLMSGVGTPAKTAPAAERVRGPGVGVTEASPDLTSAAPAPLNALEKARGVESMVKEQAAEQARRIDEGAK
Ga0302262_102392271	3300028743	Fen	VTGMHRRIGRQGGWVGLIVILLALAIVAWLSKDALKQYGLMSGLGTPPKASQAAERVRGPGVGVTEASPDLSTATPAPMNALEKARGVESMVKEQAA
Ga0302290_100781331	3300028777	Fen	MKRRIGRQRGFLGLVVILIGLLIVAWLSMDALKQYGMLSGTTAPAKVAPAAERVRGPGEGVTQAAPDATTVTPAPMDALSKARGLENAVREQAAETSRRIDEGSK
Ga0302257_11096161	3300028855	Fen	MHRRIGRQGGWVGLIVILLALAIVAWLSKDALKQYGLMSGLGTPPKASQAAERVRGPGVGVTEASPDLSTATPAPMNALEKARGVESMVKEQAAEQSRRIDEGTK
Ga0302295_10265912	3300028856	Fen	MTRRIGRQRGFLGLVVILIALLIVAWLSMDALKQYGMLSGTSAPAKPAPASERVRGPGEGVTQAAPDVTTVTPAPMDALSKARGLENAVKEQATETSRRIDEGSK
Ga0302259_11397392	3300028861	Fen	MKRRIGRQRGFLGLVVILIGLLIVAWLSMDALKQYGMPTGTAEPAKVAPATERMRGPGEGGTQAAPDVTTVTPAPMDALGKARGLENAVREQAAETSRRIDEGSK
Ga0302163_101532562	3300028868	Fen	MTGMHRRIGRQGGWVGLIVILLALAIVAWLSKDALKQYGLMSGVGTPAKTAPAAERVRGPGVGVTEASPDLSSAAPAPLNALEKARGVESMVKEQAAEQSRRIDEGAK
Ga0302254_101259011	3300028870	Fen	MTGMHRRIGRQGGWVGLIVILLALAIVAWLSKDALKQYGLMSGMGTPAKTAPAAERVRGPGVGVTEASPDLTSAAPAPLNALEKARGVESMVKEQAAEQARRIDEGAK
Ga0311347_102014692	3300029923	Fen	MGRRKGRQGGFLGLVVILIVLLIVAWLSMDALKQYGMLSGAAAPSKDAPAAPRVRGPGEGVTQATPDVTTATPAPMDAMSKARGLENAVKEQAAETSRRIDDGSK
Ga0302298_100459912	3300029980	Fen	MTGMHRRIGRQGGWVGLIVILLALAIVAWLSKDALKQYGLMSGVGTPAKTAPAAERVRGPGVGVTEASPDLTSAAPAPLNALEKARGVESMVKEQAAEQARRIDEGAK
Ga0311332_101743223	3300029984	Fen	MGRRKGRQGGFLGLVVILIVLLIVAWLSMDALKQYGMLSGAAAPSKAAPAAPRVRGPGEGVTQATPDVTTATPAPMDAMSKARGLENA
Ga0311332_108269162	3300029984	Fen	MNRRKGRQGGFLGLVVILIALLIVAWLSMDALKAYGLMSGTTPPKSAPAAGSVRGPGVGVTEAAPDVTTVTPAPMDALGKARGLESAVREQAAETSRRVDAGSK
Ga0311332_113408602	3300029984	Fen	MRHRIGRQGGWVGLIVILLALLIVAWLSKDALKRYGLMSGLGESPGAAQSKESVRGPGVGVTGVAPDVTTVTPAPFEALQRARGLESAVKEQAAENTKRIDDGLK
Ga0311334_100081349	3300029987	Fen	VTGMHRRIGRQGGWVGLIVILLALAIVAWLSKDALKQYGLMSGLGTPPKDSPAAERVRGPGVGVTEASPDMSTATPAPMNALEKARGVESMVKEQAAEQSRRIDEGTK
Ga0311334_113373962	3300029987	Fen	VLLIVAWLSMDALKQYGMLSGAAAPSKDAPAAPRVRGPGEGVTQATPDVTTATPAPMDAMSKARGLENAVKEQAAETSRRIDDGSK
Ga0311365_111040642	3300029989	Fen	MTRRIGRQGGFLWLVVVLIALLIVAWLSMAALKEYGVMSGVGTEPKPAPAERVRGPGEGVTQPSPDVSTATPAPMNALEKARGLESAVHEQAAEQSRRIDQ
Ga0311365_119202042	3300029989	Fen	GFLGLVVILIALLIVAWLSMDALKAYGLMSGTTPPKSAPAAGSVRGPGVGVTEAAPDVTTVTPAPMDALGKARGLESAVREQAAETSRRVDAGSK
Ga0311337_108856022	3300030000	Fen	MKRRIGRQGGFLGLVIVLIALLIVAWLSMEALKEYGLMSGVGTQPKSAPAERVRGPGEGVTQPSPDVSTATPAPMNALEKARGLESAVHEQAAEQSRRIDQVGK
Ga0311350_100737831	3300030002	Fen	KRRIGRQRGFLGLVVILIGLLIVAWLSMDALKQYGMPTGTAAPAKVAPATERMRGPGEGGTQAAPDVTTVTPAPMDALGKARGLENAVREQAAETSRRIDEGSK
Ga0302175_100690151	3300030014	Fen	GRQRGFLGLVVILIALLIVAWLSMDALKQYGMLPGAAAPSKSAPASERVRGPGPGVTEASPDVTTVTPAPLDALGKARGLESAVREQAAETSRRIDEGSK
Ga0302175_100727622	3300030014	Fen	MTRRIGRQRGFLGLVVILIALLIVAWLSMDALKQYGMLSGTSAPAKPAPASERVRGPGEGVTQAAPDVTTVTPAPMDALSKARGLENAVKEQATETSRRIDEGS
Ga0302175_101160901	3300030014	Fen	MTGMHRRIGRQGGWVGLIVILLALAIVAWLSKDALKQYGLMSGVGTPAKTAPAAERVRGPGVGVTEASPDLTSAAPAPLNALEKARGVESMVKEQAAE
Ga0302255_10271003	3300030050	Fen	RGFLGLVVILIGLLIVAWLSMDALKQYGMPTGTAEPAKVAPATERMRGPGEGGTQAAPDVTTVTPAPMDALGKARGLENAVREQAAETSRRIDEGSK
Ga0302255_10609862	3300030050	Fen	MKRRIGRQRGFLGLVVILIGLLIVAWLSMEALKQYGMPSGTAAPAKAAPAAERMRGPGEGVTQAAPDVTTVTPAPMDALGKARGLENAVREQAAETSRRIDEGS
Ga0302217_100965802	3300030052	Fen	VAWLSMDALKQYGMLSGTSAPAKPAPASERVRGPGEGVTQAAPDVTTVTPAPMDALSKARGLENAVKEQATETSRRIDEGSK
Ga0311333_100439412	3300030114	Fen	VTGMHRRIGGQGGWVGLIVILLALAIVAWLSKDALKQYGLMSGLGTPPKASQAAERVRGPGVGVTEASPDLSTATPAPMNALEKARGVESMVKEQAAEQSRRIDEGTK
Ga0311333_101570863	3300030114	Fen	MGRRIGRQGGFLGLVVILIVLLIVAWLSMDALKQYGMLSGAAAPSKDAPAAPRVRGPGEGVTQATPDVTTATPAPMDAMSKARGLENAVKEQAAETSRRIDDGSK
Ga0311333_103112202	3300030114	Fen	MKRRIGRQGGFLGLVIVLIALLIVAWLSMEALKEYGLMSGVGTQPKSAPAERVRGPGEGVTQASPDVSTATPAPMNALEKARGLESAVQEQAAEQSRRIDQVGK
Ga0311349_112996021	3300030294	Fen	GRQGGFLGLVVILIVLLIVAWLSMDALKQYGMLSGAAAPSKAAPAAPRVRGPGEGVTQATPDVTTATPAPMDAMSKARGLENAVKEQAAETSRRIDDGSK
Ga0311349_118511612	3300030294	Fen	MGRRKGRQGGFLGLVIILIALLIVAWLSMDALKQYGMLSGTSAPSKAAPAAERVRGPAEGVTQAAPDVTTVTPAPMDALSKARGLENAVREQAAETSRRIDEGSK
Ga0311360_107612052	3300030339	Bog	FLGLVVILIALLIVAWLSMDALKAYGLMSGTTPPKSAPAAGSVRGPGVGVTEAAPDVTTVTPAPMDALGKARGLESAVREQAAETSRRVDAGSK
Ga0311360_111796222	3300030339	Bog	VTGMHRRIGRQGGWVGLIVILLALAIVAWLSKDALKRYGLMSGLGTPPKASQAAERVRGPGVGVTEASPDLSTATPAPMNALEKARGVESMVKEQAAEQSRRIDEGTK
Ga0311335_100663421	3300030838	Fen	TGMHRRIGRQGGWVGLIVILLALAIVAWLSKDALKQYGLMSGVGTPAKTAPAAERVRGPGVGVTEASPDLTSAAPAPLNALEKARGVESMVKEQAAEQARRIDEGAK
Ga0311335_101073652	3300030838	Fen	MGRRKGRQGGFLGLVVILIVLLIVAWLSMDALKQYGMLSGAAAPSKAAPAAPRVRGPGEGVTQATPDVTTATPAPMDAMSKARGLENAVKEQAAETSRRIDDGSK
Ga0302323_1002617903	3300031232	Fen	MTRRIGRQGGFLGLVVVLIALLIVAWLSMAALKEYGVMSGVGTEPKPAPAERVRGPGEGVTQPSPDVSTATPAPMNALEKARGLESAVHEQAAEQSRRIDQVGK
Ga0311351_101250961	3300031722	Fen	VTGMHRRIGRQGGWVGLIVILLALAIVAWLSKDALKQYGLMSGLGTPPKASQAAERVRGPGVGVTEASPDLSTATPAPMNALEKARGVESMVKEQA
Ga0311351_105453692	3300031722	Fen	MTGMHRRIGRQGGWVGLIVILLALAIVAWLSKDALKQYGLMSGVGTPAKTAPAAERVRGPGVGVTEASPDLSSAAPAPLNALEKARGVESMVKE
Ga0302321_1001761362	3300031726	Fen	MGRRKGRQGGFLGLVVILIVLLIVAWLSMDALKQYGMLSGAAAPSKAAPAAPRVRGPGEGVTQATPDVTTATPAPMDAMGKARGLENAVKEQAAETSRRIDDGSK
Ga0302322_1002155683	3300031902	Fen	MGRSKGRQGGFLGLVVILIVLLIVAWLSMDALKQYGMLSGAAAPSKDAPAAPRVRGPGEGVTQATPDVTTATPAPMDAMSKARGLENAVKEQAAETSRRIDDGSK
Ga0302322_1004108282	3300031902	Fen	MTGMHRRIGRQGGWVGLIVILLALAIVAWLSKDALKQYGLMSGVGTPAKTAPAAERVRGPGVGVTEASPDLSSAAPAPLNALEKARGVESMVKEQAAEQSRRIDEGTK
Ga0302322_1005701871	3300031902	Fen	MNRRKGRQGGFLGLVVILIALLIVAWLSMDALKAYGLMSGTTPPKSAPAAGSVRGPGVGVTEAAPDVTIVTPAPMDALGKARGLESAVREQAAETSRRVDAGSK
Ga0311367_100486482	3300031918	Fen	MTGMHRRIGRQGGWVGLIVILLALAIVAWLSKDALKQYGLMSGVGTPAKTAPAAERVRGPGVGVTEASPDLSSAAPAPLNALEKARGVESMVKEQAAEQARRIDEGAK
Ga0311367_102727653	3300031918	Fen	MTRRIGRQGGFLGLVIVLIALLIVAWLSMAALKEYGVMSGVGTEPKPAPAERVRGPGEGVTQPSPDVSTATPAPMNALEKARGLESAVHEQAAEQSRRIDQVGK
Ga0315292_110430241	3300032143	Sediment	MTGMHRRIGRQGGWVGLIVILLALAIVAWLSKDALKQYGLMSGLGTPPKASPAAERVRGPGVGVTEASPDLSTATPAPFNALEKARGVESMVKEQAAEQSRRIDEGTK
Ga0315283_121211051	3300032164	Sediment	LALVIVAWLSKDALKQYGLMSGLEKQPKATSATEHVRGAGIGVSGAAPDITTATPAPLNALEKARGVESMVKEQAAEQSRRIDEGTK
Ga0315271_101213963	3300032256	Sediment	MRQRSRQAGYLGLVVILIAVLIVAWLSVDALKRYGLMSGVGTPAKTAPSAERARGPGVGVTDAAPDVSAVTPAPLDALDKARGLESAVREQAAEQSRRIDQGVK
Ga0315271_104782251	3300032256	Sediment	MRQRSKQAGYLGLVVILIAVLIVAWLSVDALKRYGLMSGVGAPAKTAPAAERVRGPGVGATDAARDVSTVTPAPMEALERARGLESAVREQAAEQSRRIDQGTK
Ga0315271_115723792	3300032256	Sediment	MAGMHRRIGRQGGWVGLVVILLALAIVAWLSKDALKQYGVMSGLEKQPKATSATESVRGAGIGVSGAAPDITTATPAPLNALEKARGVESMVKEQAAEQSRRIDEGTK
Ga0315287_111357012	3300032397	Sediment	MTGMHRRIGRQGGWVGLIVILLALAIVAWLSKDALKQYGLMSGLGTPPKASPAAEHVRGPGVGVTEASPDLSTATPAPFNALEKARGVESMVKEQAAEQSRRIDEGTK
Ga0315287_115185142	3300032397	Sediment	MTGTHRSIRRQGGWVGLIVILLALAIVAWLSKDALKQYGLMSGPGKPPTASPAEENVRGPGVGVTGASPDLSTATPAPLNALERARGVESMVREQATQQSLRIDEGTK
Ga0364945_0137281_239_553	3300034115	Sediment	MNRRIGRQRGFLGLIVILIALLIVAWLSMDALKEYGVMSGTGPSPKSAPAAERARGPGVGSSESREVPTATPAPVNALDKARGLEGAVREQAADQSRRIDEATK
Ga0364945_0287202_52_330	3300034115	Sediment	LVVILIALLIVAWLSMDALKQYGMMSGLGPTVKPVPAAERARGPGVGVTEASPDITTVTPAPLEALERARGVESMVKEQAAENARRIDDATK
Ga0370489_0002293_2491_2808	3300034127	Untreated Peat Soil	MGRRKGRQGGFLGLVIILIALLIVAWLSMDALKQYGMLSGTSAPSKAAPAADRVRGPGEGVTQAAPDVTTVTPAPMDALGKARGLENAVKEQAAETSRRIDEGSK
Ga0370493_0002193_1947_2264	3300034129	Untreated Peat Soil	MNRRKRRQGGFLGLVVILIALLIVAWLSMDALKEYGMLSGTSAPSKPAPASERLRGPGEGVTQAAPDVTSVTPAPMDALDKARGLESAVREQAAETSRRIDEGSK
Ga0364929_0296270_3_290	3300034149	Sediment	MNRRIGRQRGFLGLIVILVALLIVAWLSMDALKAYGVMSGVGPNPKSAPAAEPARGPGIAGTSSQEVTSAAPAPMNALDKAHGLESAVREQAADQS
Ga0370502_0156017_397_708	3300034156	Untreated Peat Soil	MNRRIGRQRGFLGLIVILIALLIVAWLSMDALKEYGVKSGVGPPPKAPAAEPARGPGIAGTDAREVTTATPAPMNALDKARGLEGAVREQAADQSRRIDEATK
Ga0370485_0050080_43_318	3300034358	Untreated Peat Soil	VIILIALLIVAWLSMDALKQYGMLSGTSAPSKAAPAADRVRGPGEGVTQAAPDVTTVTPAPMDALGKARGLENAVKEQAAETSRRIDEGSK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F098305

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences