Metagenome Family F098242

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F098242
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	122 residues
Representative Sequence	MLKNAAVILAFILLVSCGGTETWIPIAANRPAVTRVHVQYLENPPQRPHIVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK
Number of Associated Samples	82
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	17.31 %
% of genes near scaffold ends (potentially truncated)	35.58 %
% of genes from short scaffolds (< 2000 bps)	95.19 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (91.346 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (24.038 % of family members)
Environment Ontology (ENVO)	Unclassified (42.308 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.115 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 17.33% β-sheet: 22.00% Coil/Unstructured: 60.67%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF03734	YkuD	3.85
PF12951	PATR	1.92
PF13884	Peptidase_S74	1.92
PF01594	AI-2E_transport	0.96
PF00847	AP2	0.96
PF00884	Sulfatase	0.96
PF00211	Guanylate_cyc	0.96
PF14534	DUF4440	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	3.85
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	3.85
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.96
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.35 %
Unclassified	root	N/A	8.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.35 %
Unclassified	root	N/A	8.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.35 %
Unclassified	root	N/A	8.65 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	80.77 %
Unclassified	root	N/A	8.65 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.92 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	80.77 %
Unclassified	root	N/A	8.65 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.92 %

Name	Rank	Taxonomy	Distribution
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	60.58 %
Unclassified	root	N/A	8.65 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	6.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.92 %

Name	Rank	Taxonomy	Distribution
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	60.58 %
Unclassified	root	N/A	8.65 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	6.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.92 %

Name	Rank	Taxonomy	Distribution
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	60.58 %
Unclassified	root	N/A	8.65 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	6.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.92 %

Name	Rank	Taxonomy	Distribution
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	60.58 %
Unclassified	root	N/A	8.65 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	6.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.92 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17334996	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1177	Open in IMG/M
2088090014\|GPIPI_17334997	All Organisms → cellular organisms → Bacteria	6772	Open in IMG/M
2170459010\|GIO7OMY01EHSRM	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	547	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2070642	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	570	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_13989653	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	570	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101947481	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	2920	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101948012	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3532	Open in IMG/M
3300000789\|JGI1027J11758_12573269	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	909	Open in IMG/M
3300000891\|JGI10214J12806_10124585	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	805	Open in IMG/M
3300000955\|JGI1027J12803_100436011	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	582	Open in IMG/M
3300000955\|JGI1027J12803_100989712	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300001431\|F14TB_102961910	Not Available	541	Open in IMG/M
3300001431\|F14TB_108929996	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	507	Open in IMG/M
3300002245\|JGIcombinedJ26739_100218230	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1800	Open in IMG/M
3300002568\|C688J35102_120381815	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1028	Open in IMG/M
3300004157\|Ga0062590_100211325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1415	Open in IMG/M
3300004479\|Ga0062595_101452823	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	629	Open in IMG/M
3300004480\|Ga0062592_100890084	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	801	Open in IMG/M
3300004643\|Ga0062591_101674692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300005093\|Ga0062594_101873504	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	635	Open in IMG/M
3300005166\|Ga0066674_10190902	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	974	Open in IMG/M
3300005289\|Ga0065704_10144717	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1480	Open in IMG/M
3300005294\|Ga0065705_10150136	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1962	Open in IMG/M
3300005294\|Ga0065705_10251479	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1193	Open in IMG/M
3300005338\|Ga0068868_101880965	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	566	Open in IMG/M
3300005347\|Ga0070668_101924982	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	545	Open in IMG/M
3300005353\|Ga0070669_100555810	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	957	Open in IMG/M
3300005355\|Ga0070671_100791032	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	826	Open in IMG/M
3300005356\|Ga0070674_100315325	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1252	Open in IMG/M
3300005367\|Ga0070667_100679963	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	951	Open in IMG/M
3300005434\|Ga0070709_11286293	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	590	Open in IMG/M
3300005456\|Ga0070678_100915230	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	802	Open in IMG/M
3300005457\|Ga0070662_101046050	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	700	Open in IMG/M
3300005468\|Ga0070707_100294378	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1577	Open in IMG/M
3300005543\|Ga0070672_101910422	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	534	Open in IMG/M
3300005548\|Ga0070665_101497239	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	683	Open in IMG/M
3300005563\|Ga0068855_101113726	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	825	Open in IMG/M
3300010373\|Ga0134128_10630865	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1192	Open in IMG/M
3300010400\|Ga0134122_12350093	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	579	Open in IMG/M
3300011270\|Ga0137391_11298830	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	575	Open in IMG/M
3300012199\|Ga0137383_10789984	Not Available	693	Open in IMG/M
3300012951\|Ga0164300_10041155	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1772	Open in IMG/M
3300012951\|Ga0164300_10303498	Not Available	836	Open in IMG/M
3300012955\|Ga0164298_10312264	Not Available	979	Open in IMG/M
3300012957\|Ga0164303_10185321	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1138	Open in IMG/M
3300012957\|Ga0164303_10186094	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300012957\|Ga0164303_10830378	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	639	Open in IMG/M
3300012960\|Ga0164301_10057967	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2034	Open in IMG/M
3300012960\|Ga0164301_10708055	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	759	Open in IMG/M
3300012960\|Ga0164301_11528715	Not Available	551	Open in IMG/M
3300012961\|Ga0164302_10080211	All Organisms → cellular organisms → Bacteria	1736	Open in IMG/M
3300012961\|Ga0164302_10450164	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	894	Open in IMG/M
3300012961\|Ga0164302_10937168	Not Available	668	Open in IMG/M
3300012984\|Ga0164309_10216057	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300012984\|Ga0164309_11036892	Not Available	678	Open in IMG/M
3300012985\|Ga0164308_11641690	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	595	Open in IMG/M
3300012987\|Ga0164307_10641988	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300012987\|Ga0164307_11500050	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	570	Open in IMG/M
3300012988\|Ga0164306_10192318	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1426	Open in IMG/M
3300012989\|Ga0164305_10384085	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1070	Open in IMG/M
3300013296\|Ga0157374_10075957	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3176	Open in IMG/M
3300013296\|Ga0157374_11160766	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	793	Open in IMG/M
3300013297\|Ga0157378_11245427	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	784	Open in IMG/M
3300013306\|Ga0163162_10562584	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1268	Open in IMG/M
3300013307\|Ga0157372_13271928	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	516	Open in IMG/M
3300014969\|Ga0157376_11472236	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	713	Open in IMG/M
3300015077\|Ga0173483_10430922	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	685	Open in IMG/M
3300015371\|Ga0132258_11296126	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1841	Open in IMG/M
3300015371\|Ga0132258_13620584	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1056	Open in IMG/M
3300015374\|Ga0132255_103486462	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	669	Open in IMG/M
3300015374\|Ga0132255_104033782	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300015374\|Ga0132255_104625069	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	583	Open in IMG/M
3300015374\|Ga0132255_105038190	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	559	Open in IMG/M
3300016422\|Ga0182039_11930280	Not Available	542	Open in IMG/M
3300017792\|Ga0163161_10979896	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	721	Open in IMG/M
3300017792\|Ga0163161_11535560	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	585	Open in IMG/M
3300018468\|Ga0066662_12036763	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	601	Open in IMG/M
3300019362\|Ga0173479_10365667	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	683	Open in IMG/M
3300022756\|Ga0222622_10327163	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1062	Open in IMG/M
3300022756\|Ga0222622_10381062	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	989	Open in IMG/M
3300025906\|Ga0207699_10323803	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1082	Open in IMG/M
3300025907\|Ga0207645_11035024	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	555	Open in IMG/M
3300025916\|Ga0207663_10720040	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	791	Open in IMG/M
3300025922\|Ga0207646_10250626	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1600	Open in IMG/M
3300025926\|Ga0207659_10900268	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	761	Open in IMG/M
3300025929\|Ga0207664_11844682	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	527	Open in IMG/M
3300025930\|Ga0207701_10556003	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	979	Open in IMG/M
3300025931\|Ga0207644_10961755	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	716	Open in IMG/M
3300025933\|Ga0207706_11666557	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	514	Open in IMG/M
3300025972\|Ga0207668_11814754	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	550	Open in IMG/M
3300026023\|Ga0207677_11733421	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	579	Open in IMG/M
3300026121\|Ga0207683_10937806	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	804	Open in IMG/M
3300027537\|Ga0209419_1026201	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1085	Open in IMG/M
3300031231\|Ga0170824_114013536	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	813	Open in IMG/M
3300031446\|Ga0170820_12257990	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	892	Open in IMG/M
3300031474\|Ga0170818_108148034	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	880	Open in IMG/M
3300031716\|Ga0310813_10744094	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	879	Open in IMG/M
3300031740\|Ga0307468_100181846	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1397	Open in IMG/M
3300031890\|Ga0306925_10805030	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300032180\|Ga0307471_103392103	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	564	Open in IMG/M
3300032261\|Ga0306920_101645193	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300032421\|Ga0310812_10412799	Not Available	607	Open in IMG/M
3300032421\|Ga0310812_10486300	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	556	Open in IMG/M
3300033412\|Ga0310810_11247967	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	594	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.27%
Host-Associated	Host-Associated	31.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.35%
Plants	Host-Associated → Plants	31.73%
Aquatic	Environmental → Aquatic	1.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.42%
Sediment	Environmental → Aquatic → Sediment	1.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.50%
Loam	Environmental → Terrestrial → Soil → Loam	10.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.92%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	24.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.58%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.92%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.96%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03888780	2088090014	Soil	MKCVILTVTLWLAVLAVFSSCRGPEMWIPQGSPRAAVTIGHVQFLESPPQRAYALVGIITPPAGQYETEAEAVNAMRKEAAKHGADAIYIESVAKEGGWRFGFGRWGGSGGTFSDVQYRAKAIAWK
GPIPI_00390950	2088090014	Soil	MSKIAVSLLVAALLISCRGPEMWIPQGSPRAAVTIGHVQFLESPPQRAYALVGIITPPAGQYETEAEAVNAMRKEAAKHGADAIYIESVAKEGGWRFGFGRWGGSGGTFSDVQYRAKAIAWK
F62_10158710	2170459010	Grass Soil	MKNAVFIIALALFTSCGGPEVWIPQGSAHAAVTREHVQFWESPPQRPYVVIGIITPESGEYETEAEAVKAMRKEAAKYGADAIYIESATQQGGWRFGFSRFGGEGGSFSDVQYRAKAIVW
ICChiseqgaiiDRAFT_20706421	3300000033	Soil	MLKNAAVILAFXLLXSCGGTETWXPIAXNRPAVTRXHVQYLENPPQRPHTVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIYIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK*
ICChiseqgaiiFebDRAFT_139896531	3300000363	Soil	MRTSMLKNAAVILAFXLLXSCGGTETWXPIAXNRPAVTRXHVQYLENPPQRPHTVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIYIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK*
INPhiseqgaiiFebDRAFT_1019474812	3300000364	Soil	MKCVILTVTLWLAVLAVFSSCRGPEMWIPQGSPRAAVTIGHVQFLESPPQRAYALVGIITPPAGQYETEAEAVNAMRKEAAKHGADAIYIESVAKEGGWRFGFGRWGGSGGTFSDVQYRAKAIAWK*
INPhiseqgaiiFebDRAFT_1019480122	3300000364	Soil	MSKIAVSLLVAALLISCRGPEMWIPQGSPRAAVTIGHVQFLESPPQRAYALVGIITPPAGQYETEAEAVNAMRKEAAKHGADAIYIESVAKEGGWRFGFGRWGGSGGTFSDVQYRAKAIAWK*
JGI1027J11758_125732691	3300000789	Soil	MKCVILTVTLWLAVLAVFSSCRGPEMWIPQGSPRAAVTIGHVQFLESPPQRAYALVGIITPPAGQYETEAEAVNAMRKEAAKHGADAIYIESVAKEGGWRFGFGR
JGI10214J12806_101245852	3300000891	Soil	MRTSMLKNAAVILAFILLLSCGGTETWIPIAANRPAVTRVHVQYLENPPQRPHIVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK*
JGI1027J12803_1004360111	3300000955	Soil	SCRGPEMWIPQGSPRAAVTIGHVQFLESPPQRAYALVGIITPPAGQYETEAEAVNAMRKEAAKHGADAIYIESVAKEGGWRFGFGRWGGSGGTFSDVQYRAKAIAWK*
JGI1027J12803_1009897122	3300000955	Soil	VKNIVLILALGFLASCGGPEIWIPQGSSRPAVTREQIQFLDSLPQMPYRVVGIITPPTGEYETEAEAVKAMRKEAAKHGADAIYIESATKEGGWRFGFSRFGGEGGSFSDVQYRAKAIVWN*
F14TB_1029619101	3300001431	Soil	LGILTSCGGTETWIPLAPNRPAVTRQDVQFLEYPPQKPHIEIGIITPXXXEYETEAEAVKEMGKIAAKHGADAIYIESARKEGGWRFGFRRFGGEGGSFSDVQYRARAIVWR*
F14TB_1089299961	3300001431	Soil	TETITMKNAIFIITLALFTSCGGPEVWIPQGSAHAAVTREHVQFWESPPQRPYVVIGIITPESGKYETEAEAVKAMRKEAAKYGADAVYIESATQQGGWRFGFSRFGGEGGSFSDVQYRAKAIVWK*
JGIcombinedJ26739_1002182302	3300002245	Forest Soil	MMRNTPLIALVALFTSCGGPEMWIPQGSSRPAVAREHVQFLDSPPQRPYAVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAVYIESQTESGGWRFSVGGFGRPSGGSFREVTFRAKAIVWK*
C688J35102_1203818151	3300002568	Soil	MLKNAAVIFAFILLVSCGGTETWIPLSQNRPAVTRTDVQFLENPPQRPHIVIGIITPPAGEYETEAEAVRAMRKIAAKHGANAIYIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWR*
Ga0062590_1002113252	3300004157	Soil	VQAKQSVVLVALAILTSCGGTETWIPLAPNRPAVTREQVQYLEDRPQRAYIEIGIITPPSGEYETEAEAVKAMRKIAAQHGANAIYIESATKEGGWRFGFSRFGGEGCSFSDVQYRARAIVWR*
Ga0062595_1014528231	3300004479	Soil	MMIARRGVLVIAAAILTSCGGAETWIPLAANRPAVTRTDVQFLESPPQRPHIVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIYIESETQEGGWRFGMGTFGRMSGGSFNDVHFRAKAIVWK*
Ga0062592_1008900841	3300004480	Soil	MRTSMVKNTALILAFILLVSCGGTETWIPIAANRPAVTRVHVQYLENPPQRPHIVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK*
Ga0062591_1016746922	3300004643	Soil	LVQAKQSVVLVALAILTSCGGTETWIPLAPNRPAVTREQVQYLEDRPQRAYIEIGIITPPSGEYETEAEAVKAMRKIAAQHGADAIYIESATKEGGWRFGFSRFGGEGDF*
Ga0062594_1018735042	3300005093	Soil	MRRKSSRLNKDLFQMRTSMLKNAAVILAFILLVSCGGTETWIPIASNRPAVTREHVQYLENPPQRPHTVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIYIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK*
Ga0066674_101909022	3300005166	Soil	MLKNAPVIFAFILLVSCGGTETWIPLSQNRPAVTRTDVQFLENPPQRPHIVIGIITPPAGEYETEAEAVRAMRKMAAKHGANAIYIESATKEGGWRFGFSRFGGEGGSFRDVQYRARAIVWR*
Ga0065704_101447173	3300005289	Switchgrass Rhizosphere	MRTSMLKNAAVILAFILLVSCGGTETWIPIASNRPAVTREHVQYLENPPQRPHIVIGIITPPSGEYETEAEAVKAMRKEAAKHGADAVYIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK*
Ga0065705_101501363	3300005294	Switchgrass Rhizosphere	MKKNNSLLDKDLFQMRTSMLKNVAVILAFILLVSCGGTETWIPLAPNRPAVTRTVVQFLENPPQRPHIVIGIITPPSGEYETEAEAVKAMRKTAAQHGADAIYIESATKEGVWRFGFSRFGGEGGSFSDVQYRAKAIVWK*
Ga0065705_102514792	3300005294	Switchgrass Rhizosphere	MRTSMLKNAALILAFILLVSCGGTETWIPIAANRPAVTRVHVQYLENPPQRPHIVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK*
Ga0068868_1018809651	3300005338	Miscanthus Rhizosphere	AFVQAKQSVVLVALAILTSCGGTETWIPLAPNRPAITREQVQYLESPPQRPHIEIGIITPPSGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGWRFGFSRFGGEGGSFSDVQYRARAIVWR*
Ga0070668_1019249821	3300005347	Switchgrass Rhizosphere	RRRSYFTATCARPRLMRRKNSRLNKDLFQMRTSMLKNAAVILAFILLVSCGGTETWIPIASNRPAVTREHVQYLENPPQRPHTVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIYIESATKEGGWRFGFSRFGGEGGSFRDVQYRARAIVWK*
Ga0070669_1005558102	3300005353	Switchgrass Rhizosphere	MRTSMLKNGTVVLAFILLTSCCGTETWIPIASNGPNVTRVHVQYLENPPQRPHTVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK*
Ga0070671_1007910322	3300005355	Switchgrass Rhizosphere	MRTSMLKNAAVILAFILLVSCGGTETWIPIAANRPAVTRVHVQYLENPPQRPHIVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK*
Ga0070674_1003153254	3300005356	Miscanthus Rhizosphere	MLKIAAVILAFILLVSCGGTETWIPIASNRPAVTREHVQYLENPPQRPHTVIGIITPPSGEYETEAEAVKAMRKEAAKHGADAIYIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIIWK*
Ga0070667_1006799632	3300005367	Switchgrass Rhizosphere	VQAKQSVVLVALAILTSCGGTETWIPLAPNRPAITREQVQYLESPPQRPHIEIGIITPPSGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGWRFGFSRFGGEGGSFSDVQYRARAIVWR*
Ga0070709_112862931	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRTSMLKNAALILAFILLVSCGGTETWIPIAANRPAVTRVHVQYLENPPQRPHIVIGIITPPGGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK*
Ga0070678_1009152301	3300005456	Miscanthus Rhizosphere	GGTETWIPLAPNRPAITREQVQYLESPPQRPHIEIGIITPPSGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGWRFGFSRFGGEGGSFSDVQYRARAIVWR*
Ga0070662_1010460501	3300005457	Corn Rhizosphere	MRRKNSRLNKDLFQMRTSMLKNAAVILAFILLVSCGGTETWIPIASNRPAVTREHVQYLENPPQRPHTVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIYIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK*
Ga0070707_1002943782	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSKAVAFIVILAFVTSCGGPEVWIPQGPSRPAVAREQVQFLDSPPQRPYRVVGIITPPAGEYETEAEAVKAMRKEAAKRGADAIYIESATKEGGWRFGFSRFGGEGGSFSDVQYRAKAIVWK*
Ga0070672_1019104221	3300005543	Miscanthus Rhizosphere	VQAKQSVVLVALAILTSCGGTETWIPLAPNRPAITREQVQYLESPPQRPHIEIGIITPPSGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGWRFGFSRFGGEGGSFSDVQYRARAI
Ga0070665_1014972392	3300005548	Switchgrass Rhizosphere	VQAKQSVVLVALAILTSCGGTETWIPLAPNRPAITREQVQYLESPPQRPHIEIGIITPPSGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGWRFGFSRFGGEGGSFSDVQ
Ga0068855_1011137261	3300005563	Corn Rhizosphere	MLKNAAVILAFILLVSCGGTETWIPIAANRPAVTRVHVQYPDNPPQRPHIVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRFGFSRFGGEGGSF
Ga0134128_106308652	3300010373	Terrestrial Soil	MLKNAAVILAFILLVSCGGTETWIPIAANRPAVTRVHVQYLENPPQRPHIVIGIITPAAGEYDTEAEAVKAMRKEAAKHGADAIFIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK*
Ga0134122_123500931	3300010400	Terrestrial Soil	VQVKRSVLVVALAILTSCGGTETWIPLAPNRPAVVREQVQYLENPPQRPHIVIGIITPPSGEYETEAEAVKAMRKIAAKHGANAIYIESATKEGGWRFAFSRFGGEGGSFSDVQY
Ga0137391_112988301	3300011270	Vadose Zone Soil	MPKSLVLVGLLALVTSCGGPDVWIPQGSARAAVTREHVQFLESPLQRRYVVIGIITPPAGQYETEAEAVKAMRKEAAKHGADAIYIESATQEGGWRFGFGFSNVQY
Ga0137383_107899842	3300012199	Vadose Zone Soil	FVQVKRSVLVVALAILTSCGGTETWIPLAPNRTAVVREKVQSLEYRPQRPHIEIGIITLPSGEYETEAEAIKAMRKIAAKHGADAIYIESATKEGGWPIGFSRFGGEGGSFSDVQYRARAIVWR*
Ga0164300_100411552	3300012951	Soil	MLKNAAVILAFILLVSCGGTETWIPIAANRPAVPRVHVQYLENPPQRPHIVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK*
Ga0164300_103034981	3300012951	Soil	VKVKRSVLVVALAILTSCGGTETWIPLAPNRPALVREQVQYLEHPPQRPHVEIGIITPPSGEYETEAEAVKAMRKIAARHGADAIYIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWR*
Ga0164298_103122641	3300012955	Soil	VKVKRSVLVVALAILTSCGGTETWIPLAPNRPAIVREQVQYLEHPPQRPHVEIGIITPPSGEYETEAEAVKAMRKIAARHGADAIYIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWR*
Ga0164303_101853211	3300012957	Soil	ILLVSCGGTETWIPIAANRPAVPRVHVQYLENPPQRSHIVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK*
Ga0164303_101860942	3300012957	Soil	VQVKRSVLVAALALLASCGGTETWIPLAPNRPAVTRQEVQFLEYPPQRSHVVIGIITPPSGEYETEAEAVKAMRKIAAAHGANAIYIESATKEGGWKFGFNRFGGEGGSFSDVQYRAKAIVWR*
Ga0164303_108303782	3300012957	Soil	MLKNAAVILAFILLVSCGGTETWIPIAANRPAVPRVHVQYLENPPQRPHIVIGIITPAAGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGNWRIGFSRFGGEGGSFSDVQYRARAIV
Ga0164301_100579671	3300012960	Soil	VKVKRSVLVVALAILTSCGGTETWIPLAPNRPAIVREQVQYLEHPPQRPHVEIGIITPPSGEYETEAEAVKAMRKIAARHGADAIYIESATKEGGWRFGFSRFGGEGGSFSDVQYRARASVWR*
Ga0164301_107080552	3300012960	Soil	MLKNAAVILAFILLVSCGGTETWIPIAANRPAVSRVHVQYLENPPQRPHIVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK*
Ga0164301_115287151	3300012960	Soil	VLVVALTILTSCGGTETWIPLAPNRPAVTRQEVQFLEYPPQRSHVVIGIITPPSGEYETEAEAVKAMRKVAAVHGANAIYIESPTKEGGWKFGFNRFGGEGGSFSDVQYRAKAIVWR*
Ga0164302_100802113	3300012961	Soil	VKVKRSVLVVALAILTSCGGTETWIPLAPNRPAIVREQVQYLEHPPPRPHVEIGIITPPSGEYETEAEAVKAMRKIAARHGADAIYIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWR*
Ga0164302_104501642	3300012961	Soil	MLKNTALILAFILLVSCGGTETWIPIAANRPAVPRVHVQYLENPPQRPHIVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK*
Ga0164302_109371681	3300012961	Soil	VVKVKRSVLVVALTILTSCGGTETWIPLAPNRPAVKRQEIQFLEYPPQRPHVVIGIITPPSGEYETEAEAVKAMRKIAAAHGANAIYIESATKEGGWKFGFNRFGGEGGSFSDVQYRAKAIVWR*
Ga0164309_102160573	3300012984	Soil	MKNAVFIIALALFTSCGGPEIWIPQGSAHAAVRREHVQFWESPPQRPYVVIGIITPESGEYETEAEAVKAMRKEAAKYGADAIYIESATQQGGWRFGFSRFGGEGGSFSDVQYRAKAIVWK*
Ga0164309_110368921	3300012984	Soil	VSTLVFVQVKRSVLVAALALLASCGGTETWIPLAPNRPAVTRQEVQFLEYPPQRSHVVIGIITPPSGEYETEAEAVKAMRKIAAAHGANAIYIESATKEGGWKFGFNRFGGEGGSFSDVQYRAKAIVWR*
Ga0164308_116416902	3300012985	Soil	MLKNAAVILAFILLVSCGGTETWIPIAANRPAVTRVHVQYLENPPQRSHIVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRVGFSRFGGEGGSFSDVQYRARAIVWK*
Ga0164307_106419882	3300012987	Soil	VSTLVFVQVKRSVLVAALALLASCGGTETWIPLAPNRPAVTRQEVQFLEYPPQRSHVVIGIITPPSGEYETEAEAVKAMRKIAAAHGANAIYIESATKEGGWKLGFNRFGGEGGSFSDVQYRAKAIVWR*
Ga0164307_115000502	3300012987	Soil	MRRKNSRLNKDLFQMRTSMLKNAAVILAFILLVSCGGTETWIPIAANRPAVTRVHVQYLENPPQRPHIVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRVGFSRFGGEGGSVSDVQYHARAIVWK*
Ga0164306_101923183	3300012988	Soil	MLKNAAVILALILLVSCGGTETWIPIAANRPAVSRVHVQYLENPPQRPHIVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK*
Ga0164305_103840851	3300012989	Soil	MLKNAAVILALILLVSCGGTETWIPIAANRPAVTRVHVQYLENPPQRSHIVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRVGFSRFGGEGGSFSDVQYRARAIVWK*
Ga0157374_100759574	3300013296	Miscanthus Rhizosphere	VQAKQSVVLVALAILTSCGGTETWIPLAPNRPAITREQVQYLESPPQRPHIEIGIITPPSGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGWRCVFSRFGGEGGSFSDVQYRARAIVWR*
Ga0157374_111607662	3300013296	Miscanthus Rhizosphere	MRRKNSRLNKDLFQMRTSMLKNAAVILAFILLVSCGGTETWIPIASNRPAVTREHVQYLENPPQRPHTVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIYIESATKEGGWRFGFSRF
Ga0157378_112454272	3300013297	Miscanthus Rhizosphere	DKDLFQMRTSMLKNAAVILAFILLVSCGGTETWIPIAANRPAVSRVHVQYLENPPQRPHIVIGIITPAAGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRVGFSRFGGEGGSFSDVQYHARAIVWK*
Ga0163162_105625842	3300013306	Switchgrass Rhizosphere	AFILLVSCGGTETWIPIAANRPAVTRVHVQYLENPPQRPHIVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK*
Ga0157372_132719282	3300013307	Corn Rhizosphere	MRTSMLKNAAVILAFILLVSCGGTETWIPIAANRPAVSRVHVQYVENPPQRPHIVIGIITPAAGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK*
Ga0157376_114722362	3300014969	Miscanthus Rhizosphere	MLKNAAVILAFILLVSCGGTETCIPIAANRPAVTRVHVQYLENPPQRPHIVIGIITPPAGEYETEAVKAMRKEAAKHGADAIFIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK
Ga0173483_104309222	3300015077	Soil	MLKNAAVILAFILLVSCGGTETWIPIAANRPAVTRVHVQYLENPPQRSHIVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK*
Ga0132258_112961262	3300015371	Arabidopsis Rhizosphere	MLKNAAVILAFILLVSCGGTETWIPIAANRPAVTRVHVQYLENPPQRPHIVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK*
Ga0132258_136205842	3300015371	Arabidopsis Rhizosphere	MKILILGAAIALLLSSCGGPEMWIPQGSPRPAVTRDHVQFLESPPQRGYAVVGIITPPGGEYETEAEAVKAMCKEAAKHGADAIYIESATKEGGWRFGFSRWGGEGGSFSDIQYRAKAIVWK*
Ga0132255_1034864621	3300015374	Arabidopsis Rhizosphere	MKFLMPCAAIALLLSSCGGPEMWIPQGSPRPAVTRDHVQFLESPPQRGYAVVGIITPPGGEYETEAEAVKAMCKEAAKHGADAIYIESATKEGGWRFGFSRWGGEGGSFSDIQYRAKAIVWK*
Ga0132255_1040337822	3300015374	Arabidopsis Rhizosphere	IGKETWIPLAPNRPAITREQVQYLEGRPQRPYIEIGIITPPSGEYETEAEAIKAMRKIAAKHGADAIYVESAMKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWR*
Ga0132255_1046250692	3300015374	Arabidopsis Rhizosphere	VQVKRSVLVVALAILTSCGGTETWIPIAANRPAVTRVHVQYLENPPQRPHTVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRFGFSRFGGEGGSFSDVQYRA
Ga0132255_1050381901	3300015374	Arabidopsis Rhizosphere	VQAKQSVVLVTLAILTSCGGTETWIPLAPNRPAITREQVQYLESPPQRPHIEIGIITPPSGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWR*
Ga0182039_119302801	3300016422	Soil	TMKKTIFSCIAASLAVFSSCRGPEMWIPQGSPRAAVTTEHVQFLESPPQRPYILVGIITPPTGQYETEAEVVNAMRKEAAKHGADAIYIESATKEGGWRFGFGGFRGSGGSFSDVEYRAKAIAWR
Ga0163161_109798961	3300017792	Switchgrass Rhizosphere	MRTSMLKNAAVILAFILLVSCGGTETWIPIASNRPAVTREHVQYLENPPQRPHTVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIYIESATKDGGWRFGFSRFGGEGGSFSDVQYRARAIVWK
Ga0163161_115355602	3300017792	Switchgrass Rhizosphere	MRTSMLKNAAVILAFILLVSCGGTETWIPIAANRPAVSRVHVQYLENPPQRPHIVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRFGFSRFGGEGGSFSDVQ
Ga0066662_120367631	3300018468	Grasslands Soil	MLKNVVLFAALTLFVSCRGPETWIPQGNSRAAVTREHVQFLDSPPQRPYVVIGIITPPTGEYETEAEAVKAMRKEAAKHGADAVYIESQTKEGGWRFSVGGWGRPEG
Ga0173479_103656672	3300019362	Soil	MLKNAAVILAFILLVSCGGTETWIPIAANRPAVTRVHVQYLENPPQRPHIVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWR
Ga0222622_103271632	3300022756	Groundwater Sediment	MKPVIAATAIAALFCLTGCPSETWIQVSNDRAAVYPSVVQFLDAPPTRPHQVVGIITPPSGEYETEAEAVKAMRKQAAKHGADAIYIESQTEAGGWKFGSGWGGVSGGSFSELRFRAKAIVWK
Ga0222622_103810622	3300022756	Groundwater Sediment	TSMLKSAAVILAFILLVSCGGTETWIPIASNRPAVTREHVQYLENPPQRPHIVIGIITPPSGEYETEAEAVKAMRKEAAKHGADTIYIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK
Ga0207699_103238031	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MLKNAALILAFILLVSCGGTETWIPIAANRPAVTRVHVQYLENPPQRPHIVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK
Ga0207645_110350242	3300025907	Miscanthus Rhizosphere	MRTSMLKNAAVILAFILLVSCGGTETWIPIAANRPAVTRVHVQYLENPPQRPHIVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIYIESATKDGGWRFGF
Ga0207663_107200402	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MRTSMLKNAALILAFILLVSCGGTETWIPIAANRPAVTRVHVQYLENPPQRPHIVIGIITPAAGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK
Ga0207646_102506262	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSKAVAFIVILAFVTSCGGPEVWIPQGPSRPAVAREQVQFLDSPPQRPYRVVGIITPPAGEYETEAEAVKAMRKEAAKRGADAIYIESATKEGGWRFGFSRFGGEGGSFSDVQYRAKAIVWK
Ga0207659_109002682	3300025926	Miscanthus Rhizosphere	MLKNAAVILAFILLVSCGGTETWIPIAANRPAVTRVHVQYLENPPQRPHIVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIYIESATKEGGWRFGFSRFGGEGGSFRDVQYRARAIVWK
Ga0207664_118446821	3300025929	Agricultural Soil	LILAFILLVSCGGTETWIPIAANRPAVSRVHVQYLENPPQRPHIVIGIITPPSGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK
Ga0207701_105560033	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MRTSMLKNAAVILAFILLVSCGGTETWIPIASNRPAVTREHVQYLENPPQRPHTVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAVYIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK
Ga0207644_109617551	3300025931	Switchgrass Rhizosphere	MRTSMLKNAAVILAFILLVSCGGTETWIPIAANRPAVTRVHVQYLENPPQRPHIVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIYIESATKEGGWRFGFSRFGGEGGSFRDVQHRARAIVWK
Ga0207706_116665571	3300025933	Corn Rhizosphere	MRTSMLKNAAVILAFILLVSCGGTETWIPIASNRPAVTREHVQYLENPPQRPHTVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIYIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK
Ga0207668_118147541	3300025972	Switchgrass Rhizosphere	RRRSYFTATCARPRLMRRKNSRLNKDLFQMRTSMLKNAAVILAFILLVSCGGTETWIPIASNRPAVTREHVQYLENPPQRPHTVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIYIESATKEGGWRFGFSRFGGEGGSFRDVQYRARAIVWK
Ga0207677_117334211	3300026023	Miscanthus Rhizosphere	TLAFVQAKQSVVLVALAILTSCGGTETWIPLAPNRPAITREQVQYLESPPQRPHIEIGIITPPSGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGWRFGFSRFGGEGGSFSDVQYRARAIVWR
Ga0207683_109378062	3300026121	Miscanthus Rhizosphere	GGTETWIPLAPNHPAITREQVQYLESPPQRPHIEIGIITPPSGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGWRFGFSRFGGEGGSFSDVQYRARAIVWR
Ga0209419_10262011	3300027537	Forest Soil	MMRNTPLIALVALFTSCGGPEMWIPQGSSRPAVAREHVQFLDSPPQRPYAVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAVYIESQTESGGWRFSVGGFGRPSGGSFREVTFRAKAIVWK
Ga0170824_1140135361	3300031231	Forest Soil	MKNAVFIIALALFTSCGGPEVWIPQGSAHAAVTREHVQFWESPPQRPYVVIGIITPESGKYETEAEAVKAMRKEAAKYGADAVYIESATQQGGWRFGFSRFGGEGGSFSDVQYRAKAIVW
Ga0170820_122579901	3300031446	Forest Soil	MKNALFIIALALFTSCGGPEVWIPQGSAHAAVTREHVQFWESPPQRPYVVIGIITPESGKYETEAEAVKAMRKEAAKYGADAVYIESATQQGGWRFGFSRFGGEGGSFSDVQYRAKAIVW
Ga0170818_1081480342	3300031474	Forest Soil	VFIIALALFTSCGGPEVWIPQGSAHAAVTREHVQFWESPPQRPYVVIGIITPESGKYETEAEAVKAMRKEAAKYGADAVYIESATQQGGWRFGFSRFGGEGGSFSDVQYRAKAIVWK
Ga0310813_107440942	3300031716	Soil	MRTSMLKNAALISAFILLVSCGGTETWIPIAANRPAVPRVHVQYLENPPQRPHIVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRFGFSRFGGEGGSFSDVQYRARALV
Ga0307468_1001818462	3300031740	Hardwood Forest Soil	MRTSMLKIAAVILAFILLVSCGGTETWIPIASNRPAVTREHVQYLENPPQRPHTVIGIITPPAGEYETEAEAVKAMRKKAAKHGADAIYIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK
Ga0306925_108050302	3300031890	Soil	VKRAILAAVALLTAFSSCRGPEMWIPQGSPRAAVTTEHVQFLESPPQRPYILVGIITPPTGQYETEAEVVNAMRKEAAKHGADAIYIESATKEGGWRFGFGGFRGSGGSFSDVEYRAKAIAWR
Ga0307471_1033921031	3300032180	Hardwood Forest Soil	MRTSMLKNAAVILAFILLVSCGGTETWIPIAANRPAVTRVHVQYLENPPQRPHIVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK
Ga0306920_1016451932	3300032261	Soil	VKQAILAAVALLTAFSSCRGPEMWIPQGSPRAAVTTEHVQFLESPPQRPYILVGIITPPTGQYETEAEVVNAMRKEAAKHGADAIYIESATKEGGWRFGFGGFRGSGGSFSDVEYRAKAIAWR
Ga0310812_104127991	3300032421	Soil	VKVKRFLLAVALAILTSCGGTETWIPLAPNRPAITREQVQYLEDRPQRPYIEIGIITPPSGEYETEAEAVKAMRKIAARHGANAIYIESATKEGGWRFGFSRFGGEGGSFSDVQYRARALVWR
Ga0310812_104863001	3300032421	Soil	MRTSMLKNAAVILAFILLVSCGGAETWIPIASNRPAVTREHVQYLENPPQRPHTVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIYIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK
Ga0310810_112479672	3300033412	Soil	RENSSLVDKDLFQMRTSMLKNAALILAFILLVSCGGTETWIPIAANRPAVTRVHVQYLENPPQRPHIVIGIITPPAGEYETEAEAVKAMRKEAAKHGADAIFIESATKEGGWRFGFSRFGGEGGSFSDVQYRARAIVWK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F098242

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences