Metagenome / Metatranscriptome Family F098237

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098237
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	87 residues
Representative Sequence	MAKLRIAIAAALMLCAFIPVSAAALECKHTPAQYTEALRTLESQAAKARVLADRNPLYESDVAYYDSVLRDARACVKMLAPVVSASR
Number of Associated Samples	75
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.25 %
% of genes near scaffold ends (potentially truncated)	25.96 %
% of genes from short scaffolds (< 2000 bps)	73.08 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.154 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (18.269 % of family members)
Environment Ontology (ENVO)	Unclassified (37.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.269 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 66.96% β-sheet: 0.00% Coil/Unstructured: 33.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF02538	Hydantoinase_B	18.27
PF05719	GPP34	9.62
PF12697	Abhydrolase_6	2.88
PF01740	STAS	1.92
PF04280	Tim44	1.92
PF13787	HXXEE	0.96
PF12695	Abhydrolase_5	0.96
PF08237	PE-PPE	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0146	N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunit	Amino acid transport and metabolism [E]	36.54
COG4395	Predicted lipid-binding transport protein, Tim44 family	Lipid transport and metabolism [I]	1.92
COG5651	PPE-repeat protein	Function unknown [S]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.15 %
Unclassified	root	N/A	28.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.15 %
Unclassified	root	N/A	28.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.15 %
Unclassified	root	N/A	28.85 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	64.42 %
Unclassified	root	N/A	28.85 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	58.65 %
Unclassified	root	N/A	28.85 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	45.19 %
Unclassified	root	N/A	28.85 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	34.62 %
Unclassified	root	N/A	28.85 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	34.62 %
Unclassified	root	N/A	28.85 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.96 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	34.62 %
Unclassified	root	N/A	28.85 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	0.96 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	34.62 %
Unclassified	root	N/A	28.85 %
Sphingomonas sp. PAMC 26621	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. PAMC 26621	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001431\|F14TB_106568869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	640	Open in IMG/M
3300001661\|JGI12053J15887_10032055	All Organisms → cellular organisms → Bacteria → Proteobacteria	2955	Open in IMG/M
3300003911\|JGI25405J52794_10163661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. PAMC 26621	509	Open in IMG/M
3300004643\|Ga0062591_101326942	Not Available	709	Open in IMG/M
3300004780\|Ga0062378_10027472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1135	Open in IMG/M
3300004780\|Ga0062378_10256345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	506	Open in IMG/M
3300004808\|Ga0062381_10030432	All Organisms → cellular organisms → Bacteria	1440	Open in IMG/M
3300005181\|Ga0066678_10333005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	999	Open in IMG/M
3300005332\|Ga0066388_100094864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3424	Open in IMG/M
3300005332\|Ga0066388_100096383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3405	Open in IMG/M
3300005332\|Ga0066388_100225812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2503	Open in IMG/M
3300005332\|Ga0066388_100285679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2293	Open in IMG/M
3300005332\|Ga0066388_100341805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2143	Open in IMG/M
3300005332\|Ga0066388_100778972	All Organisms → cellular organisms → Bacteria	1552	Open in IMG/M
3300005332\|Ga0066388_100953815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1428	Open in IMG/M
3300005332\|Ga0066388_101968255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1046	Open in IMG/M
3300005332\|Ga0066388_102579491	Not Available	925	Open in IMG/M
3300005332\|Ga0066388_105242145	Not Available	658	Open in IMG/M
3300005458\|Ga0070681_11838264	Not Available	533	Open in IMG/M
3300005618\|Ga0068864_102126249	Not Available	568	Open in IMG/M
3300005713\|Ga0066905_100016531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3765	Open in IMG/M
3300005713\|Ga0066905_100325328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1218	Open in IMG/M
3300005713\|Ga0066905_100870137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	786	Open in IMG/M
3300005713\|Ga0066905_102090526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	527	Open in IMG/M
3300005764\|Ga0066903_100000452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	25572	Open in IMG/M
3300005764\|Ga0066903_101197083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1410	Open in IMG/M
3300005833\|Ga0074472_10373709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2161	Open in IMG/M
3300005833\|Ga0074472_10819980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6676	Open in IMG/M
3300005833\|Ga0074472_11147315	All Organisms → cellular organisms → Bacteria	2285	Open in IMG/M
3300005843\|Ga0068860_101425206	Not Available	714	Open in IMG/M
3300005937\|Ga0081455_10048621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3662	Open in IMG/M
3300005983\|Ga0081540_1020450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3979	Open in IMG/M
3300006046\|Ga0066652_101216283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	713	Open in IMG/M
3300006755\|Ga0079222_12332606	Not Available	535	Open in IMG/M
3300007788\|Ga0099795_10000321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8664	Open in IMG/M
3300007788\|Ga0099795_10381260	Not Available	637	Open in IMG/M
3300009137\|Ga0066709_102162017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	768	Open in IMG/M
3300009143\|Ga0099792_10000587	All Organisms → cellular organisms → Bacteria → Proteobacteria	13535	Open in IMG/M
3300009235\|Ga0103857_10121627	Not Available	545	Open in IMG/M
3300009809\|Ga0105089_1034200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	738	Open in IMG/M
3300009812\|Ga0105067_1103332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	520	Open in IMG/M
3300009814\|Ga0105082_1010902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1287	Open in IMG/M
3300010043\|Ga0126380_11335562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	626	Open in IMG/M
3300010046\|Ga0126384_10022692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4073	Open in IMG/M
3300010046\|Ga0126384_10062380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2617	Open in IMG/M
3300010046\|Ga0126384_11109732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	726	Open in IMG/M
3300010046\|Ga0126384_12346946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	516	Open in IMG/M
3300010047\|Ga0126382_10500837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	976	Open in IMG/M
3300010154\|Ga0127503_11263206	Not Available	511	Open in IMG/M
3300010159\|Ga0099796_10001006	All Organisms → cellular organisms → Bacteria → Proteobacteria	5324	Open in IMG/M
3300010359\|Ga0126376_10108969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2131	Open in IMG/M
3300010360\|Ga0126372_12214597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	599	Open in IMG/M
3300010362\|Ga0126377_10192805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1947	Open in IMG/M
3300010362\|Ga0126377_10478830	All Organisms → cellular organisms → Bacteria	1272	Open in IMG/M
3300010362\|Ga0126377_10614572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1133	Open in IMG/M
3300010362\|Ga0126377_10676561	Not Available	1083	Open in IMG/M
3300010362\|Ga0126377_11375912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	778	Open in IMG/M
3300010362\|Ga0126377_11663695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	713	Open in IMG/M
3300010366\|Ga0126379_10272467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1681	Open in IMG/M
3300010400\|Ga0134122_11383843	Not Available	716	Open in IMG/M
3300011444\|Ga0137463_1237780	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300012204\|Ga0137374_10834121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	681	Open in IMG/M
3300012206\|Ga0137380_10923453	Not Available	749	Open in IMG/M
3300012208\|Ga0137376_10730026	Not Available	854	Open in IMG/M
3300012210\|Ga0137378_10162489	All Organisms → cellular organisms → Bacteria → Proteobacteria	2072	Open in IMG/M
3300012212\|Ga0150985_104254795	Not Available	600	Open in IMG/M
3300012212\|Ga0150985_119127296	All Organisms → cellular organisms → Bacteria → Proteobacteria	1805	Open in IMG/M
3300012353\|Ga0137367_10816718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	647	Open in IMG/M
3300012355\|Ga0137369_10188598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1604	Open in IMG/M
3300012362\|Ga0137361_10261718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1577	Open in IMG/M
3300012469\|Ga0150984_110412489	Not Available	1140	Open in IMG/M
3300012469\|Ga0150984_119012404	Not Available	519	Open in IMG/M
3300012924\|Ga0137413_10005485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5788	Open in IMG/M
3300012924\|Ga0137413_11482691	Not Available	551	Open in IMG/M
3300012930\|Ga0137407_12416165	Not Available	502	Open in IMG/M
3300012944\|Ga0137410_11726129	Not Available	551	Open in IMG/M
3300012948\|Ga0126375_10674702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	801	Open in IMG/M
3300012948\|Ga0126375_10696794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	790	Open in IMG/M
3300012960\|Ga0164301_11415141	Not Available	569	Open in IMG/M
3300015242\|Ga0137412_10342571	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300018075\|Ga0184632_10230760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	811	Open in IMG/M
3300018078\|Ga0184612_10263426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	889	Open in IMG/M
3300018081\|Ga0184625_10070363	All Organisms → cellular organisms → Bacteria	1777	Open in IMG/M
3300018476\|Ga0190274_12208754	Not Available	647	Open in IMG/M
3300021086\|Ga0179596_10008980	All Organisms → cellular organisms → Bacteria → Proteobacteria	3189	Open in IMG/M
3300026557\|Ga0179587_11012479	Not Available	547	Open in IMG/M
3300027169\|Ga0209897_1073336	Not Available	509	Open in IMG/M
3300027512\|Ga0209179_1001423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2923	Open in IMG/M
3300027654\|Ga0209799_1055772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	885	Open in IMG/M
3300027669\|Ga0208981_1011085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2281	Open in IMG/M
3300027735\|Ga0209261_10017629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1777	Open in IMG/M
3300027778\|Ga0209464_10126728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	887	Open in IMG/M
3300027840\|Ga0209683_10015350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3123	Open in IMG/M
3300027843\|Ga0209798_10075166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1739	Open in IMG/M
3300031152\|Ga0307501_10260840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	519	Open in IMG/M
3300031720\|Ga0307469_10128659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1849	Open in IMG/M
3300031820\|Ga0307473_11351197	Not Available	535	Open in IMG/M
3300032174\|Ga0307470_11960846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	500	Open in IMG/M
3300032180\|Ga0307471_100802863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1108	Open in IMG/M
3300034818\|Ga0373950_0115197	Not Available	590	Open in IMG/M
3300034820\|Ga0373959_0228446	Not Available	501	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.50%
Host-Associated	Host-Associated	12.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.12%
Aquatic	Environmental → Aquatic	15.38%
Plants	Host-Associated → Plants	12.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.12%
Freshwater	Environmental → Aquatic → Freshwater	8.65%
Sediment	Environmental → Aquatic → Sediment	6.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.08%
Loam	Environmental → Terrestrial → Soil → Loam	20.19%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.81%
Sand	Environmental → Terrestrial → Soil → Sand	3.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.92%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.96%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	18.27%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.85%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.96%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	16.35%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	6.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.85%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.85%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	2.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.88%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.92%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.92%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	1.92%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.92%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.96%
River Water	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water	0.96%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004780	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh	Environmental	Open in IMG/M
3300004808	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009235	Microbial communities of water from Amazon river, Brazil - RCM10	Environmental	Open in IMG/M
3300009809	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40	Environmental	Open in IMG/M
3300009812	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60	Environmental	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027169	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027735	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh (SPAdes)	Environmental	Open in IMG/M
3300027778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh (SPAdes)	Environmental	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TB_1065688691	3300001431	Soil	MTKLRSAIAAAVMLGALVPVPAAALECKNTLAQHTEALRILEAEAAKARILADRNPLYESDVAYYASVLRDARSCVRMLGPVVSASR*
JGI12053J15887_100320552	3300001661	Forest Soil	MANMRIAIAAALMLCAFIPVGAEARDLSCNQSLARHVEALRILEDKAAKAEAMAQDNPLYESDVGYYKSVLRDARACVKNLSTVVSVSR*
JGI25405J52794_101636611	3300003911	Tabebuia Heterophylla Rhizosphere	MTKLAIAAAVMLGALIPFPAAALECKNTLAQHTEALRILEAEAAKARVLADRNPLYESDVAYYASVLRDARTCVRVLGPVVSASR*
Ga0062591_1013269421	3300004643	Soil	MAKIRIAIAVALMLCAFIPVSAAQAGTDQCKHELAQYTEALKILEAEAAQARAKADANPLYLADVGYYDAVLRDARQCLKTLTPLTTAARN*
Ga0062378_100274722	3300004780	Wetland Sediment	MVKLRVAIAAALMLSAFIPVSAVALECKHTPAQHTEALRILEAEAAKARVLADRNPLYESDVAYYNSVLRAARACVKMLAPVMSASR*
Ga0062378_102563451	3300004780	Wetland Sediment	MAKLRIAIAATLMLCAFIPVSIAQARDLECKHTLAQHTEAVRILEAEAARARVLADQNPLYESDVAYYASVLRDARQCVKTLAPMVSASR*
Ga0062381_100304323	3300004808	Wetland Sediment	MVKLRVAIAAALMLSAFIPVSAVALECKHTPAQHTEALRILEAEAAKARVLADRNPLYESDVAYYNSVLRDAQACVKMLAPVVSASR*
Ga0066678_103330051	3300005181	Soil	MAKLGIAIAAAALLGALIPVPAAALECKHMLAQHTDALRTLEAEVAKARVLADRNPLHESDVAYYDSVLRDARACVKMLGPVVSASR*
Ga0066388_1000948643	3300005332	Tropical Forest Soil	MAKFRIAIAAAVMLGALIPVPSAALECKHTLAQHTEALRILEAEAAKARVLADRNPLHESDVAYYDSVLRDARACVRMLGPVVSASR*
Ga0066388_1000963833	3300005332	Tropical Forest Soil	MAKFHIAIAAAVMLGALIPVPAAALECKHTLAQHTEALRILEAEAAKARVLADRNPLHESDVAYYDSVLRDARACVRMLGPVVSASR*
Ga0066388_1002258121	3300005332	Tropical Forest Soil	MAKIRIAIAAALVLCAFIPVSAEARDLQCNQSLARSIEALRILEDKAAKAEALAQQNPLYEADVGYYTSVLRDARQCVKNLTPVVAASR*
Ga0066388_1002856793	3300005332	Tropical Forest Soil	MTKFRSAIAAAVMLGALIPIPAAALECKNTLAQHTEALRILEAEAAKARVLADRNPLYESDVAYYASVLRDVRSCVRMLGPVVSASR*
Ga0066388_1003418051	3300005332	Tropical Forest Soil	MAKLRIAIAAVLMLCAFVPVAAARDLECNHMLAQHTEAVRILEAEAAQARARADRNPLYESDVAYYSSVLRDARQCVKMLSPVVSASR*
Ga0066388_1007789722	3300005332	Tropical Forest Soil	MLCAFIPAAAARDLECKHTLAQHTEAVRILEAEAAQARVLADRNPLYESDVAYYASVLRDARQCAKMLSPVLSASR*
Ga0066388_1009538153	3300005332	Tropical Forest Soil	MAKLRIAIAAAVMLGALVPVSAAALECKHTLAQHSEALRMLEAEAAKARGLADRNPLYESDVAYYDSVLRDARACVRMLGPVVSASR*
Ga0066388_1019682553	3300005332	Tropical Forest Soil	MAKLRIAIAAALMLCVFIPVSAAHAQECSQTLAQHSEALRMLEAHAAQARILADKNPLYESDVAYYDSVLRDARHCVKMLSPVVSAAR*
Ga0066388_1025794911	3300005332	Tropical Forest Soil	MAKLRIAIAAVLMLCVFIPVSAAQARDLACKHTLAQYTEALRILEIEAAQARTKAEQNPLYESDVAYYGSVLRDARACVQMLSPVVSASR*
Ga0066388_1052421452	3300005332	Tropical Forest Soil	MVKHGIAIATVLMMVWAVIPAPAAALECKHTPAEYAEALRHLEAAAAKARMLAEQNPLYESDVAYYVAVMRDTRACAKLLAPVVSASR*
Ga0070681_118382641	3300005458	Corn Rhizosphere	MAKLRIAIAAVLVLCVFIPVSAAQARDLECKHTLGQYTEVLRILEIEAAQARMKAEQNPLYEADIGYYGSVLRDARSCVKMLT
Ga0068864_1021262491	3300005618	Switchgrass Rhizosphere	MAKIRIAIAAALMLCAFIPVGAEARDRDCNQSLARQVEALRILEIKAANAQAMAQQNPLYEADVGYYNSVLRDARQCVKNLTPMMSASR*
Ga0066905_1000165313	3300005713	Tropical Forest Soil	MAKFRIAIAAAVMLGALIPVPAAALECKHTLAQHTEVLRILEAEAAKARVLADRNPLHESDVAYYDSILRDARACIRMLGPVVSASR*
Ga0066905_1003253281	3300005713	Tropical Forest Soil	MAKLRIAIAAAAMLGALIPVPAAAQGRDVVCKHTLAQHTEALRTLEAEAAKARVLADRNPLYESDVAYYDSVLRDARACVKMLGPVVSASR*
Ga0066905_1008701371	3300005713	Tropical Forest Soil	MTKFRIAIAAAVMLGALIPFPAAALECKNTLAQHTEALRILEAEAAKARVLADRNPLYESDVGYYASVLRDARACVRILGPVVSASR*
Ga0066905_1020905261	3300005713	Tropical Forest Soil	MAKLRITIAATLMLCMYLPVAGARDVVCTYTLAQHTEALRILESEAAQARILADKNPLYESDVAYYDSVLREARQCVKTLSPIVSASR*
Ga0066903_10000045219	3300005764	Tropical Forest Soil	MAKLRIAIAAVLMLCAFVPVAAARDLECKHTLAQHTEAVRILEAEAAQARVLADRNPLYESDVAYYASVLRDARQCVKMLSPVLSASR*
Ga0066903_1011970832	3300005764	Tropical Forest Soil	MAKLRIAIAALLMLCAFIPAAAARDLECKHTLAQHTEAVRILEAEAAQARVLADRNPLYESDVAYYASVLRDARQCAKMLSPVLSASR*
Ga0074472_103737093	3300005833	Sediment (Intertidal)	MARLRIAIAAALMLCGFIPVSAAAQGREVACRHTLAQHAEALRILEAEAMKARLLADKNPLHESDVAYYGSVLRDARACVKMLAPVVSASR*
Ga0074472_108199806	3300005833	Sediment (Intertidal)	MAKLRVAIAAALMLSAFIPVSAVALECKHTPAQHTEALRILEAEAAKARVLADRNPLYESDVAYYNSVLRAAQACVKML
Ga0074472_111473153	3300005833	Sediment (Intertidal)	MATRTVEGTMLRTAVATALMLCAFIPVSAVAQGREPVCKHTLAQHTEALRILEAEALKARLLADKNPLYESDVAYYGSVLRDARHCVKMLAPVVSASR*
Ga0068860_1014252061	3300005843	Switchgrass Rhizosphere	CAVIPAPAAALECKHTPAEYAEAVRHLEAEAAKARVLAEQNPLYESDVAYYGAVLRDTRACAKMLAPVVSASR*
Ga0081455_100486213	3300005937	Tabebuia Heterophylla Rhizosphere	MTKLRIAIAAAVMLGALVPVPAAALECKNTLAQHTEALRILEAEAAKARILADRNPLYESDVAYYASVLRDARSCVRMLGPVVSASR*
Ga0081540_10204501	3300005983	Tabebuia Heterophylla Rhizosphere	MAKFRIAIAAAVMLGALIPVPAAAQGRDVVCKHTLAQHTEALRILEAEAAKARALAERNPLHESDVAYYDSVLRDARACVKMLGPVVSASR*
Ga0066652_1012162831	3300006046	Soil	MANIRIAIAAALMLCAFIPVGAEARALSCNQSLARHVEALRILEDKAAKAEAMAQQNPLYEADVGYYRSVLRDARACVKNLSTVV
Ga0079222_123326061	3300006755	Agricultural Soil	ALMLCVFIPVSAAQAAECKHTLAQYGEALRVLAAEAAQARALADRNPLYIADLSYYDSVLRDAQNCVKTLTPLTTAAR*
Ga0099795_100003215	3300007788	Vadose Zone Soil	MGLVEGTMANMRIAIAAALMLCAFIPVGAEARDLSCNQSLARHVEALRILEDKAAKAEAMAQENPLYESDVGYYKSVLRDARACVKNLSTVVSVSR*
Ga0099795_103812601	3300007788	Vadose Zone Soil	MAKLRIAIAAALMLCAFIPVSAAQAGDLQCNHTLAQYGEALRVLESEAAQAQVLAQQNPLYEADVGYYASVLRDARQCVKNLSPVVSAAR*
Ga0066709_1021620172	3300009137	Grasslands Soil	AAMLGALIPLPAAAQGRDVVCKHTLAQHTEALRILEAEAAKARVLAERNPLYESDVAYYASVLRDARACVKMLGPVVSASR*
Ga0099792_100005878	3300009143	Vadose Zone Soil	MGLVEGTMANMRIAIAAALMLYAFIPVGAEARDLSCNQSLARHVEALRILEDKAAKAEAMAQDNPLYESDVGYYKSVLRDARACVKNLSTVVSVSR*
Ga0105248_106839701	3300009177	Switchgrass Rhizosphere	MAKLGIAIATALMICAVIPAPAAALECKHTPAEYAEAVRHLEAEAAKARVLAEQNPLYESDVAYYGAVL
Ga0103857_101216271	3300009235	River Water	LVEAIMVRISVVLAAVLMMSALAPTVAAARDLQCNQPLARYTEAVRLFEAEAAKALAMAEKNPLYEADVGYYESVLRDARQCVKTLRPLVSASR*
Ga0105089_10342002	3300009809	Groundwater Sand	VEGIMAKLRIAIAAALMLCVFIPVSAAQARECNYTLAQHTEALRTLETHAAQARILADKNPLYESDVAYYDSVLRDARHCVKMLSPVVSAAR*
Ga0105067_11033321	3300009812	Groundwater Sand	MLRIAIAAALMLCAFMPVSAAQAREPVCKHTLAQHTEALRILEAEAAQARILADQNPLYESDVGYYASVLRAAR
Ga0105082_10109022	3300009814	Groundwater Sand	MAKLRIAIAAALMLCVFIPVSAAQARECNYTLAQHTEALRTLETHAAQARILADKNPLYESDVAYYDSVLRDARHCVKMLSPVVSAAR*
Ga0126380_113355621	3300010043	Tropical Forest Soil	MAKFRIAIAAAVMLGALIPVPAAALECKYTLAQHTEALRILETEAAKARVLADRNPLYESDVAYYASVVRDARACVKMLGPVVSASR*
Ga0126384_100226924	3300010046	Tropical Forest Soil	MAKLRIAIAAVLMLCAFVPVAAAGDLECNHTLAQHTEAVRILEAEAAQARALADRNPLYESDVAYYSSVLRDARQCVKMLSPVVSASR*
Ga0126384_100623802	3300010046	Tropical Forest Soil	MAKLRIAIAAVLMLCAFVPVAAARDLECKHTLAQHTEAVRILEAEAAQARSLADRNPLYESDVAYYASVLRDARQCVKMLSPVLSASR*
Ga0126384_111097322	3300010046	Tropical Forest Soil	MAKFHIAIAAAVMLGAPIPVPAAALECKHTLAQHTEALRILEAEAAKARVLADRNPLHESDVAYYDSVLRDARVCVKLLGPVVSASR*
Ga0126384_123469461	3300010046	Tropical Forest Soil	MAKLRIAIAAAAMLGALIPVPAAAQGRDVVCKHTLAQHTEALRTLEAEAAKARVLADRNPLYESDVAYYDSVLRDA
Ga0126382_105008371	3300010047	Tropical Forest Soil	LALKVEGIMAKLRIAIAAALMLCVFIPVSAAQAQDCNQTLAQHSEALRTLEAHAAQARILADKNPLYESDVAYYDSVLRDARHCVKMLSPVVSAAR*
Ga0127503_112632061	3300010154	Soil	MAKLGIAIATILMICAVIPAPAAALECKHTPAEYAEAVRHLEEAAAKARVLAEQNPLYESDVAYYGAVLRDTRACAKMLAPVVSASR*
Ga0099796_100010063	3300010159	Vadose Zone Soil	MGLVEGTMANMRIAIAAALMLCAFIPVGAEARDLSCNQSLARHVEALRILEDKAAKAEAMAQDNPLYESDVGYYKSVLRDARACVKNLSTVVSVSR*
Ga0126376_101089692	3300010359	Tropical Forest Soil	MEKLRIAIAAVLMLCAFVPVAAARDLECNHTLAQHTEAVRILEAEAAQARALADRNPLYESDVAYYSSVLRDARQCVKMLSPVVSASR*
Ga0126372_122145971	3300010360	Tropical Forest Soil	MAKLRIAIAAALVLFAFVPVSAAARDTTCTHTLAQYTEALRMLEAEAAKAQALAEQNPLYESDVAYYESVLKDARACVRTLKPLVAASR*
Ga0126377_101928052	3300010362	Tropical Forest Soil	MAKFHIAIAAAMMLGALIPVPAAALECKHTLAQHTEALRILEAEAAKARVLADRNPLHESDVAYYDSVLRDARACVRMLGPVVSALR*
Ga0126377_104788301	3300010362	Tropical Forest Soil	HGLASRVEGIMAKLRIAIAAALMLCVFIPVSAAQAQDCNQTLAQHSEALRTLEAHAAQARILADKNPLYESDVAYYDSVLRDARHCVKMLSPVVSAAR*
Ga0126377_106145722	3300010362	Tropical Forest Soil	MAKLRITIAATLMLCMYIPVAGARDVVCTYTLAQHTEALRILKSEAAQARILADKNPLYESDVAYYDSVLRDARQCVKVLSPIVSASR*
Ga0126377_106765611	3300010362	Tropical Forest Soil	MTKFRIVIAAAVMLGSLIPFPAAALECKNTLAQHTEALRILEAEAAKARILADRNPIYESDVGYYASVLRDARACVKILGPVVSASR*
Ga0126377_113759121	3300010362	Tropical Forest Soil	MTKLRIAIAAVMLGALIPVPAAALECKHSLAQHAEALRILEAEAAKARVLADRNPLHESDVAYYASVLRDARSCVKMLGPVVSASR*
Ga0126377_116636951	3300010362	Tropical Forest Soil	FLRLARTNACGVKGLAPVEGTMAKLRIAIAAVLMLCAFVPVAAARDLECKHTLAQHTEAVRILEAEAAQARALADRNPLYESDVAYYASVLRDARQCVKMLSPVLSASR*
Ga0126379_102724672	3300010366	Tropical Forest Soil	MAKLRIAIAAVLMLCAFVPVAAARDLECKHTLAQHTEAVRILEAEAAQARALADRNPLYESDVAYYASVLRDARQCVKMLSPVLSASR*
Ga0134122_113838431	3300010400	Terrestrial Soil	MAKLGIAIATALMICAVIPAPAAALECKHTPAEYAEAVRHLEAEAAKARVLAEQNPLYESDVAYYGAVLRDTRTCAKMLAPVVSASR*
Ga0137463_12377802	3300011444	Soil	MAKLRIAIAAALMLCAFIPVSAAQARDLQCNHTLAQYSDALRVLESEAAKAQVLAQQNPLYEADVGYYASVLRDARQCVKNLAPVVSAAR*
Ga0137374_108341212	3300012204	Vadose Zone Soil	DGLWVEGTMANIRIAIAAVLMLCVFIPVSAAQSRDNECKHTLAQYTEALRIIEIKAAEARVLADRNPLYESDVAYYGSVLRDARACMKVLSPVVSAAR*
Ga0137380_109234532	3300012206	Vadose Zone Soil	MGLVEGTMANIRIAIAAALMLCAFIPVGAEARDLSCNQSLARHVEALRILEDKAAKAEAMAQQNPLYESDVGYYKSVLRDARACVKNLSTVVSVSR*
Ga0137376_107300261	3300012208	Vadose Zone Soil	MANIRIAIAAALMLCAFIPVGAEARDLSCNQSLARHVEALRILEDKAAKAEAMAQQNPLYEADVGYYRSVLRDAGACVKNLSTVVSVSR*
Ga0137378_101624893	3300012210	Vadose Zone Soil	MGLVEGTMANIRIAIAAALMLCAFIPVGAEARDLSCNQSLARHVEALRILEDKAAKAEAMAQQNPLYEADVGYYRSVLRDAGACVKNLSTVVSVSR*
Ga0150985_1042547951	3300012212	Avena Fatua Rhizosphere	QSSIKLAPVEGTMANIRIAIAAALMLCAFVPVGAQARDLSCNQSLDRQIEALRMLEDKAAKAEAMAQQNPLYEADVGYYTSVLRDARACMKSLSKVVSVSR*
Ga0150985_1191272961	3300012212	Avena Fatua Rhizosphere	MAKIRTAIAAALMLCAFIPVGAEARDRDCNQSLARHVEALRILEIKAANAQAMAQQNPLYEADVGYYNSVLRDARQCVKNLTPVMSASR*
Ga0137367_108167182	3300012353	Vadose Zone Soil	FIPVSAAQSRDNECKHTLAQYTEALRIIEIKAAEARVLADRNPLYESDVAYYGSVLRDARACMKVLSPVVSAAR*
Ga0137369_101885982	3300012355	Vadose Zone Soil	MANIRIAIAAVLMLCVFIPVSAAQSRDNECKHTLAQYTEALRIIEIKAAEARVLADRNPLYESDVAYYGSVLRDARACMKVLSPVVSAAR*
Ga0137361_102617182	3300012362	Vadose Zone Soil	MANMRIAIAAALMLCAFIPVGAEARDLSCNQSLARHVEALRILEDKAAKAEAMAQENPLYESDVGYYKSVLRDARACVKNLSTVVSVSR*
Ga0150984_1104124892	3300012469	Avena Fatua Rhizosphere	MAKFRIAIAAALMLCAFVPVGAQARDLSCNQSLDRQIEALRMLEDKAAKAEAMAQQNPLYEADVGYYTSVLRDARACMKSLSKVVSVSR*
Ga0150984_1190124041	3300012469	Avena Fatua Rhizosphere	DLGGPAHWVEGIMAKLRIAIAAALMVCAFIPVSAAARDAQCNGSLAQHTEALRILEAKAAEANLMAQQNPLYEADVGYYTSVLRDARTCVKTLAPVVSASR*
Ga0137413_100054855	3300012924	Vadose Zone Soil	AFIPVGAEARDLSCNQSLARHVEALRILEDKAAKAEAMAQDNPLYESDVGYYKSVLRDARACVKNLSTVVSVSR*
Ga0137413_114826911	3300012924	Vadose Zone Soil	MAKFRIAIAAALMLCAFIPVSAAQARDLQCNHTLAQYSEALRVLESEAAKAQVLAQQNLLYEADVGYYASVLRDARQCVKNLAPVVSASR*
Ga0137407_124161651	3300012930	Vadose Zone Soil	MAKLRIAIAAALMLCAFIPVSAAQARDLQCNHTLAQYSEALRVLESEAAKAQVLAQQNPLYEADVGYYASVLRDARQCVKNLAPVVSASR*
Ga0137410_117261291	3300012944	Vadose Zone Soil	MAKLRIAIAAALVLCAFIPVSAAQARDLQCNHTLAQYSEALRVLESEAAKAQVLAQQNPLYEADVGYYASVLRDARQCVKNLSPVVSAAR*
Ga0126375_106747022	3300012948	Tropical Forest Soil	MAKFRIAIAAAVVFGALIPLPAAALECKHTLAQHTEALRILEAEAAKARVLADRNPLHESDVAYYDSVLRD
Ga0126375_106967941	3300012948	Tropical Forest Soil	MAKLRIAIAAAAMLGSLIPVPAAAQGRDVVCKHTLAQHTEALRTLEAEAAKARVLADRNPLYESDVAYYDSVLRDARACVKMLGPVVSASR*
Ga0164301_114151411	3300012960	Soil	IMAKIRIAIAVALILCAFIPVSAAQAGTDQCKHELAQYTEALKILEAEAAQARAKADANPLYLADVGYYDAVLRDARQCLKTLTPLTTAARN*
Ga0137412_103425712	3300015242	Vadose Zone Soil	MAKLRIAIAAALMLCAFIPVSAAQARDLQCNHTLAQYSEALRVLESEAAKAQVLAQQNLLYEADVGYYASVLRDARQCVKNLAPVVSASR*
Ga0184632_102307602	3300018075	Groundwater Sediment	MAKLRIAIAAALMLCAFIPVSAAALECKHTPAQYTEALRTLESQAAKARVLADRNPLYESDVAYYDSVLRDARACVKMLAPVVSASR
Ga0184612_102634261	3300018078	Groundwater Sediment	MAKLRIAIAAALMLCVFIPVSAAQARECIHTLAQHTEALRTLETHAAQARILADKNPLYESDVAYYDSVLRDARHCVKMLSPVVSAAR
Ga0184625_100703632	3300018081	Groundwater Sediment	MAKLRIAIAAALMLCAFIPVSAAALECKHTPAQYTEALRTLESQAAKARVLADRNALYESDVGYYDSVLRDARACVKMLAPVVSASR
Ga0190274_122087541	3300018476	Soil	MAKLRIAIAAALMLCAFIPVSAAQARDGQCTATLAQHTEALRILESEAAKAQALAQQNPLYEADVGYSTSVLRDARQCVKTLSPMVSASR
Ga0179596_100089803	3300021086	Vadose Zone Soil	MANMRIAIAAALMLCAFIPVGAEARDLSCNQSLARHVEALRILEDKAAKAEAMAQENPLYESDVGYYKSVLRDARACVKNLSTVVSVSR
Ga0207711_113801851	3300025941	Switchgrass Rhizosphere	MAKLGIAIATALMICAVIPAPAAALECKHTPAEYAEAVRHLEAEAAKARVLAEQNPLYESDVAYYGAVLR
Ga0179587_110124791	3300026557	Vadose Zone Soil	TMANMRIAIAAALMLCAFIPVGAEARDLSCNQSLARHVEALRILEDKAAKAEAMAQENPLYESDVGYYKSVLRDARACVKNLSTVVSVSR
Ga0209897_10733361	3300027169	Groundwater Sand	MTVGPWVARPVEGTMLRIAIAAALMLCVFMPVSAAQARDLVCKHTLAQHTEALRILEAEALKARILANTNPLYE
Ga0209179_10014234	3300027512	Vadose Zone Soil	MANMRIAIAAALMLYAFIPVGAEARDLSCNQSLARHVEALRILEDKAAKAEAMAQDNPLYESDVGYYKSVLRDARACVKNLSTVVSVSR
Ga0209799_10557721	3300027654	Tropical Forest Soil	LAPVEGTMAKLRIAIAAVLMLCAFVPVAAARDLECKHTLAQHTEAVRILEAEAAQARSLADRNPLYESDVAYYASVLRDARQCVKMLSPVLSASR
Ga0208981_10110854	3300027669	Forest Soil	MANMRIAIAAALMLCAFIPVGAEARDLSCNQSLARHVEALRILEDKAAKAEAMAQDNPLYESDVGYYKSVLRDARACVKNLSTVVSVSR
Ga0209261_100176292	3300027735	Wetland Sediment	MVKLRVAIAAALMLSAFIPVSAVALECKHTPAQHTEALRILEAEAAKARVLADRNPLYESDVAYYNSVLRAARACVKMLAPVMSASR
Ga0209464_101267282	3300027778	Wetland Sediment	MVKLRVAIAAALMLSAFIPVSAVALECKHTPAQHTEALRILEAEAAKARVLADRNPLYESDVAYYNSVLRAARACVKMLAPVVSASR
Ga0209683_100153503	3300027840	Wetland Sediment	MAKLRVAIAAALMLFAFIPVSAVALECKHTPAQHTEALRILEAEAAKARVLADRNPLYESDVAYYNSVLRAARACVKMLAPVMSASR
Ga0209798_100751663	3300027843	Wetland Sediment	MAKLRVAIAAALMLCAFIPVSAVALECKHTPAQHTEALRILEAEAAKARVLADRNPLYESDVAYYNSVLRAARACVKMLAPVVSASR
Ga0307501_102608402	3300031152	Soil	MAKLRIAIAAVLMLCVFIPVSAQARDLTCKHTLAQYTEALGILEAEAAQARIQADKNPLYESDVAYYASVLRDARQCVKTLSPVVSASR
Ga0307500_100145851	3300031198	Soil	MAKLGIAIATILMICAVIPAPAAALECKHTPAEYAEAVRHLEAAAAKARVLAEQNPLYESDVAYYGAVL
Ga0307469_101286592	3300031720	Hardwood Forest Soil	MTKFRIAIAAAVMLGALIPFPVAALECKNTLTQHTEALRILEAQAAKARVLADRNPLYESDVGYYASVLRDARACVKILGPVVSASR
Ga0307473_113511971	3300031820	Hardwood Forest Soil	IATALTLCAVIPAPAAALECKHTPAEYAEALRHLEAAAAKARILAEQNPLYESDVAYYGAVLRDTRACVKTLAPVVSASR
Ga0307470_119608461	3300032174	Hardwood Forest Soil	MTKFRIAIAAAVMLGALIPFPVAALECKNTLTQHTEALRILEAQAAKARVLADRNPLYESDVGYYASVLRDARACVKILGPV
Ga0307471_1008028633	3300032180	Hardwood Forest Soil	MTKFRIAIAAAVMLGALISFPVAALECKNTLTQHTEALRILEAQAAKARVLADRNPLYESDVGYYASVLRDARACVKILGPVVSASR
Ga0373950_0115197_3_221	3300034818	Rhizosphere Soil	AVIPAPAAALECKHTPAEYAEAVRHLEAEAAKARVLAEQNPLYESDVAYYGAVLRDTRACAKMLAPVVSASR
Ga0373959_0228446_3_242	3300034820	Rhizosphere Soil	MAKLGIAIATALMICAVIPAPAAALECKHTPAEYAEAVRHLEAEAAKARVLAEQNPLYESDVAYYGAVLRDTRACAKMLA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098237

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences