NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F098205

Metagenome / Metatranscriptome Family F098205

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F098205
Family Type Metagenome / Metatranscriptome
Number of Sequences 104
Average Sequence Length 118 residues
Representative Sequence MLNKDGRLKEKRISNKLKTAGYTIKRLKDNGFVVFKMFNAYSTVDPRRWTIMINPGNESVYMTCHHNKDNLNEVLFEFDDGGNNFNRGFFVKTDSIEVLINELLEKGVNNDPTKNPFSKIK
Number of Associated Samples 82
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 30.77 %
% of genes from short scaffolds (< 2000 bps) 59.62 %
Associated GOLD sequencing projects 70
AlphaFold2 3D model prediction Yes
3D model pTM-score0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (36.538 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(18.269 % of family members)
Environment Ontology (ENVO) Unclassified
(64.423 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(84.615 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 8.72%    β-sheet: 23.49%    Coil/Unstructured: 67.79%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.43
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF04321RmlD_sub_bind 18.27
PF01467CTP_transf_like 6.73
PF03796DnaB_C 4.81
PF00154RecA 1.92
PF03237Terminase_6N 1.92
PF13712Glyco_tranf_2_5 1.92
PF00551Formyl_trans_N 0.96
PF16363GDP_Man_Dehyd 0.96
PF01541GIY-YIG 0.96
PF03721UDPG_MGDP_dh_N 0.96
PF04984Phage_sheath_1 0.96
PF00483NTP_transferase 0.96
PF00583Acetyltransf_1 0.96
PF02178AT_hook 0.96
PF13524Glyco_trans_1_2 0.96
PF13476AAA_23 0.96
PF027395_3_exonuc_N 0.96
PF13522GATase_6 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG0451Nucleoside-diphosphate-sugar epimeraseCell wall/membrane/envelope biogenesis [M] 36.54
COG0702Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domainsGeneral function prediction only [R] 36.54
COG1086NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsCCell wall/membrane/envelope biogenesis [M] 36.54
COG1087UDP-glucose 4-epimeraseCell wall/membrane/envelope biogenesis [M] 18.27
COG1088dTDP-D-glucose 4,6-dehydrataseCell wall/membrane/envelope biogenesis [M] 18.27
COG1089GDP-D-mannose dehydrataseCell wall/membrane/envelope biogenesis [M] 18.27
COG1090NAD dependent epimerase/dehydratase family enzymeGeneral function prediction only [R] 18.27
COG1091dTDP-4-dehydrorhamnose reductaseCell wall/membrane/envelope biogenesis [M] 18.27
COG0305Replicative DNA helicaseReplication, recombination and repair [L] 4.81
COG1066DNA repair protein RadA/Sms, contains AAA+ ATPase domainReplication, recombination and repair [L] 4.81
COG0468RecA/RadA recombinaseReplication, recombination and repair [L] 1.92
COG0240Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.96
COG02585'-3' exonuclease Xni/ExoIX (flap endonuclease)Replication, recombination and repair [L] 0.96
COG0677UDP-N-acetyl-D-mannosaminuronate dehydrogenaseCell wall/membrane/envelope biogenesis [M] 0.96
COG1004UDP-glucose 6-dehydrogenaseCell wall/membrane/envelope biogenesis [M] 0.96
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 0.96
COG1893Ketopantoate reductaseCoenzyme transport and metabolism [H] 0.96
COG3497Phage tail sheath protein FIMobilome: prophages, transposons [X] 0.96

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms63.46 %
UnclassifiedrootN/A36.54 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2189573028|GS313G0146KB_1112079450768All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon927Open in IMG/M
3300001344|JGI20152J14361_10026290All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Gastranaerophilales → unclassified Candidatus Gastranaerophilales → Candidatus Gastranaerophilales bacterium HUM_181999Open in IMG/M
3300001351|JGI20153J14318_10112001All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon728Open in IMG/M
3300001460|JGI24003J15210_10000024Not Available61339Open in IMG/M
3300001460|JGI24003J15210_10000049All Organisms → cellular organisms → Bacteria44934Open in IMG/M
3300001460|JGI24003J15210_10016698Not Available2862Open in IMG/M
3300001834|ACM2_1078259All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Gastranaerophilales → unclassified Candidatus Gastranaerophilales → Candidatus Gastranaerophilales bacterium HUM_18573Open in IMG/M
3300002483|JGI25132J35274_1018439All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Gastranaerophilales → unclassified Candidatus Gastranaerophilales → Candidatus Gastranaerophilales bacterium HUM_181666Open in IMG/M
3300004097|Ga0055584_100161212All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon2265Open in IMG/M
3300004279|Ga0066605_10002267Not Available12308Open in IMG/M
3300004461|Ga0066223_1049666All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon786Open in IMG/M
3300005239|Ga0073579_1190370Not Available187955Open in IMG/M
3300005239|Ga0073579_1190576All Organisms → cellular organisms → Bacteria66741Open in IMG/M
3300005433|Ga0066830_10087869All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Gastranaerophilales → unclassified Candidatus Gastranaerophilales → Candidatus Gastranaerophilales bacterium HUM_18654Open in IMG/M
3300006029|Ga0075466_1177194All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon537Open in IMG/M
3300006793|Ga0098055_1001701Not Available11704Open in IMG/M
3300006802|Ga0070749_10719989All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon533Open in IMG/M
3300006920|Ga0070748_1005189All Organisms → cellular organisms → Bacteria5841Open in IMG/M
3300006920|Ga0070748_1035806All Organisms → Viruses → Predicted Viral2018Open in IMG/M
3300006990|Ga0098046_1019991Not Available1704Open in IMG/M
3300007229|Ga0075468_10077750All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Gastranaerophilales → unclassified Candidatus Gastranaerophilales → Candidatus Gastranaerophilales bacterium HUM_181080Open in IMG/M
3300007229|Ga0075468_10137993All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon745Open in IMG/M
3300007540|Ga0099847_1018911Not Available2252Open in IMG/M
3300007541|Ga0099848_1000716Not Available15445Open in IMG/M
3300007541|Ga0099848_1029098All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Gastranaerophilales → unclassified Candidatus Gastranaerophilales → Candidatus Gastranaerophilales bacterium HUM_182309Open in IMG/M
3300007541|Ga0099848_1233517All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Gastranaerophilales → unclassified Candidatus Gastranaerophilales → Candidatus Gastranaerophilales bacterium HUM_18649Open in IMG/M
3300009074|Ga0115549_1064909All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1269Open in IMG/M
3300009149|Ga0114918_10010441All Organisms → cellular organisms → Bacteria7491Open in IMG/M
3300009149|Ga0114918_10496833All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon654Open in IMG/M
3300009149|Ga0114918_10497423All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon653Open in IMG/M
3300009422|Ga0114998_10014198Not Available4981Open in IMG/M
3300009426|Ga0115547_1055983All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1377Open in IMG/M
3300009497|Ga0115569_10068112Not Available1890Open in IMG/M
3300009599|Ga0115103_1424301Not Available521Open in IMG/M
3300009599|Ga0115103_1527184Not Available2540Open in IMG/M
3300009705|Ga0115000_10087136Not Available2107Open in IMG/M
3300010297|Ga0129345_1015840All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Gastranaerophilales → unclassified Candidatus Gastranaerophilales → Candidatus Gastranaerophilales bacterium HUM_182928Open in IMG/M
3300010299|Ga0129342_1019000Not Available2821Open in IMG/M
3300010318|Ga0136656_1087974Not Available1096Open in IMG/M
3300010392|Ga0118731_112539739Not Available811Open in IMG/M
3300010430|Ga0118733_103658174Not Available831Open in IMG/M
3300017749|Ga0181392_1205453Not Available564Open in IMG/M
3300017786|Ga0181424_10352849All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Gastranaerophilales → unclassified Candidatus Gastranaerophilales → Candidatus Gastranaerophilales bacterium HUM_18604Open in IMG/M
3300017963|Ga0180437_10936361All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon621Open in IMG/M
3300017990|Ga0180436_10206856All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Gastranaerophilales → unclassified Candidatus Gastranaerophilales → Candidatus Gastranaerophilales bacterium HUM_181421Open in IMG/M
3300018420|Ga0181563_10752705All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Gastranaerophilales → unclassified Candidatus Gastranaerophilales → Candidatus Gastranaerophilales bacterium HUM_18536Open in IMG/M
3300018682|Ga0188851_1024707All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon691Open in IMG/M
3300020165|Ga0206125_10000049All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae152239Open in IMG/M
3300020166|Ga0206128_1059375All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1812Open in IMG/M
3300020187|Ga0206130_10094011Not Available1797Open in IMG/M
3300020187|Ga0206130_10117036Not Available1501Open in IMG/M
3300020442|Ga0211559_10353610All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon681Open in IMG/M
3300020469|Ga0211577_10364326All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Gastranaerophilales → unclassified Candidatus Gastranaerophilales → Candidatus Gastranaerophilales bacterium HUM_18901Open in IMG/M
3300021957|Ga0222717_10000326Not Available41361Open in IMG/M
3300021957|Ga0222717_10001743Not Available17449Open in IMG/M
3300021957|Ga0222717_10036360Not Available3237Open in IMG/M
3300022169|Ga0196903_1038839All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon556Open in IMG/M
3300022198|Ga0196905_1089221All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Gastranaerophilales → unclassified Candidatus Gastranaerophilales → Candidatus Gastranaerophilales bacterium HUM_18833Open in IMG/M
3300022198|Ga0196905_1167570All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Gastranaerophilales → unclassified Candidatus Gastranaerophilales → Candidatus Gastranaerophilales bacterium HUM_18560Open in IMG/M
(restricted) 3300023109|Ga0233432_10021100Not Available4740Open in IMG/M
3300023568|Ga0228696_1025627All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Gastranaerophilales → unclassified Candidatus Gastranaerophilales → Candidatus Gastranaerophilales bacterium HUM_18682Open in IMG/M
3300024235|Ga0228665_1000005Not Available68981Open in IMG/M
3300024235|Ga0228665_1006637All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon2285Open in IMG/M
3300024262|Ga0210003_1000885Not Available26861Open in IMG/M
3300024262|Ga0210003_1007899Not Available7703Open in IMG/M
3300024322|Ga0228656_1086571All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Gastranaerophilales → unclassified Candidatus Gastranaerophilales → Candidatus Gastranaerophilales bacterium HUM_18677Open in IMG/M
3300024346|Ga0244775_10065880All Organisms → Viruses → Predicted Viral3115Open in IMG/M
3300024417|Ga0228650_1049128All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Gastranaerophilales → unclassified Candidatus Gastranaerophilales → Candidatus Gastranaerophilales bacterium HUM_181218Open in IMG/M
(restricted) 3300024518|Ga0255048_10189966All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Gastranaerophilales → unclassified Candidatus Gastranaerophilales → Candidatus Gastranaerophilales bacterium HUM_181004Open in IMG/M
3300025084|Ga0208298_1001447Not Available8612Open in IMG/M
3300025120|Ga0209535_1000016Not Available108882Open in IMG/M
3300025120|Ga0209535_1000027All Organisms → cellular organisms → Bacteria78260Open in IMG/M
3300025120|Ga0209535_1022591All Organisms → cellular organisms → Bacteria3146Open in IMG/M
3300025127|Ga0209348_1000766Not Available16116Open in IMG/M
3300025127|Ga0209348_1065349All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1189Open in IMG/M
3300025127|Ga0209348_1077650All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Gastranaerophilales → unclassified Candidatus Gastranaerophilales → Candidatus Gastranaerophilales bacterium HUM_181065Open in IMG/M
3300025137|Ga0209336_10090199All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Gastranaerophilales → unclassified Candidatus Gastranaerophilales → Candidatus Gastranaerophilales bacterium HUM_18881Open in IMG/M
3300025151|Ga0209645_1121852All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Gastranaerophilales → unclassified Candidatus Gastranaerophilales → Candidatus Gastranaerophilales bacterium HUM_18826Open in IMG/M
3300025543|Ga0208303_1000379Not Available18266Open in IMG/M
3300025594|Ga0209094_1048374All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1117Open in IMG/M
3300025645|Ga0208643_1031299All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Gastranaerophilales → unclassified Candidatus Gastranaerophilales → Candidatus Gastranaerophilales bacterium HUM_181759Open in IMG/M
3300025646|Ga0208161_1022102All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Gastranaerophilales → unclassified Candidatus Gastranaerophilales → Candidatus Gastranaerophilales bacterium HUM_182371Open in IMG/M
3300025652|Ga0208134_1067309All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1076Open in IMG/M
3300025860|Ga0209119_1054301Not Available1982Open in IMG/M
3300025894|Ga0209335_10012190Not Available6802Open in IMG/M
3300026448|Ga0247594_1089816All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Gastranaerophilales → unclassified Candidatus Gastranaerophilales → Candidatus Gastranaerophilales bacterium HUM_18540Open in IMG/M
3300026505|Ga0228647_1139852All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon557Open in IMG/M
3300027416|Ga0207994_1091699All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon611Open in IMG/M
3300027687|Ga0209710_1001421Not Available18452Open in IMG/M
(restricted) 3300027861|Ga0233415_10104420Not Available1250Open in IMG/M
3300028008|Ga0228674_1012315Not Available3863Open in IMG/M
3300028124|Ga0228621_1000571All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon2492Open in IMG/M
3300028290|Ga0247572_1126527All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Gastranaerophilales → unclassified Candidatus Gastranaerophilales → Candidatus Gastranaerophilales bacterium HUM_18635Open in IMG/M
3300028290|Ga0247572_1147969All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Gastranaerophilales → unclassified Candidatus Gastranaerophilales → Candidatus Gastranaerophilales bacterium HUM_18587Open in IMG/M
3300028335|Ga0247566_1069266All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Gastranaerophilales → unclassified Candidatus Gastranaerophilales → Candidatus Gastranaerophilales bacterium HUM_18592Open in IMG/M
3300028419|Ga0228625_1109850All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Gastranaerophilales → unclassified Candidatus Gastranaerophilales → Candidatus Gastranaerophilales bacterium HUM_18538Open in IMG/M
3300028599|Ga0265309_10816401All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon638Open in IMG/M
3300029319|Ga0183748_1002055Not Available11362Open in IMG/M
3300029319|Ga0183748_1033818All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1614Open in IMG/M
3300029787|Ga0183757_1000370Not Available25228Open in IMG/M
3300031539|Ga0307380_11055884All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon643Open in IMG/M
3300031565|Ga0307379_10608060All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1000Open in IMG/M
3300031578|Ga0307376_10323029All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1027Open in IMG/M
3300032011|Ga0315316_10604244All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon916Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine18.27%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous16.35%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater12.50%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine7.69%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface4.81%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine4.81%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine3.85%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater3.85%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater2.88%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient2.88%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water2.88%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil2.88%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine1.92%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine1.92%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater1.92%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment1.92%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake0.96%
Marine PlanktonEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton0.96%
MarineEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine0.96%
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment0.96%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.96%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater0.96%
Marine EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Marine Estuarine0.96%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh0.96%
SedimentEnvironmental → Aquatic → Marine → Subtidal Zone → Sediment → Sediment0.96%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2189573028Estuarine microbial communities from Columbia River, sample from South Channel ETM site, CMGS313-FOS-0p8-ETM-15mEnvironmentalOpen in IMG/M
3300001344Pelagic Microbial community sample from North Sea - COGITO 998_met_02EnvironmentalOpen in IMG/M
3300001351Pelagic Microbial community sample from North Sea - COGITO 998_met_03EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300001834Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM2, ROCA_DNA019_0.2um_2gEnvironmentalOpen in IMG/M
3300002483Marine viral communities from the Pacific Ocean - ETNP_6_30EnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300004279Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10mEnvironmentalOpen in IMG/M
3300004461Marine viral communities from Newfoundland, Canada BC-2EnvironmentalOpen in IMG/M
3300005239Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of MaineEnvironmentalOpen in IMG/M
3300005433Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF45BEnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300006990Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaGEnvironmentalOpen in IMG/M
3300007229Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300009074Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430EnvironmentalOpen in IMG/M
3300009149Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaGEnvironmentalOpen in IMG/M
3300009422Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138EnvironmentalOpen in IMG/M
3300009426Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420EnvironmentalOpen in IMG/M
3300009497Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503EnvironmentalOpen in IMG/M
3300009599Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009705Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128EnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300010299Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010318Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010392Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385EnvironmentalOpen in IMG/M
3300010430Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samplesEnvironmentalOpen in IMG/M
3300017749Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15EnvironmentalOpen in IMG/M
3300017786Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18EnvironmentalOpen in IMG/M
3300017963Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaGEnvironmentalOpen in IMG/M
3300017990Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_S_2 metaGEnvironmentalOpen in IMG/M
3300018420Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018682Metatranscriptome of marine microbial communities from Baltic Sea - GS680_0p1EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020166Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1EnvironmentalOpen in IMG/M
3300020187Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1EnvironmentalOpen in IMG/M
3300020442Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)EnvironmentalOpen in IMG/M
3300020469Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300022169Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022198Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300023109 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MGEnvironmentalOpen in IMG/M
3300023568Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 84R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024235Seawater microbial communities from Monterey Bay, California, United States - 79DEnvironmentalOpen in IMG/M
3300024262Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024322Seawater microbial communities from Monterey Bay, California, United States - 68DEnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300024417Seawater microbial communities from Monterey Bay, California, United States - 62DEnvironmentalOpen in IMG/M
3300024518 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2EnvironmentalOpen in IMG/M
3300025084Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025127Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025137Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025594Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430 (SPAdes)EnvironmentalOpen in IMG/M
3300025645Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)EnvironmentalOpen in IMG/M
3300025646Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300025860Pelagic Microbial community sample from North Sea - COGITO 998_met_03 (SPAdes)EnvironmentalOpen in IMG/M
3300025894Pelagic Microbial community sample from North Sea - COGITO 998_met_09 (SPAdes)EnvironmentalOpen in IMG/M
3300026448Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 57R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300026505Seawater microbial communities from Monterey Bay, California, United States - 59DEnvironmentalOpen in IMG/M
3300027416Estuarine microbial communities from the Columbia River estuary, USA - metaG S.757 (SPAdes)EnvironmentalOpen in IMG/M
3300027687Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)EnvironmentalOpen in IMG/M
3300027861 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MGEnvironmentalOpen in IMG/M
3300028008Seawater microbial communities from Monterey Bay, California, United States - 1D_rEnvironmentalOpen in IMG/M
3300028124Seawater microbial communities from Monterey Bay, California, United States - 25DEnvironmentalOpen in IMG/M
3300028290Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 25R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028335Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 14R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028419Seawater microbial communities from Monterey Bay, California, United States - 30DEnvironmentalOpen in IMG/M
3300028599Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160524 (Illumina Assembly)EnvironmentalOpen in IMG/M
3300029319Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516EnvironmentalOpen in IMG/M
3300029787Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172EnvironmentalOpen in IMG/M
3300031539Soil microbial communities from Risofladan, Vaasa, Finland - UN-3EnvironmentalOpen in IMG/M
3300031565Soil microbial communities from Risofladan, Vaasa, Finland - UN-2EnvironmentalOpen in IMG/M
3300031578Soil microbial communities from Risofladan, Vaasa, Finland - TR-2EnvironmentalOpen in IMG/M
3300032011Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
GS313G0146KB_006743402189573028Marine EstuarineMQHTNWSEHKVKNKIKTAGYFIKRLKDNGFVVLKMFNAYSQVDPRRWSVLIDPGYHSVYVTCFTNKDEKNEVLFEFDDGGNRFKKGFYLKTDSIEAVVTLLIEKGVNNDPSKNPFSKIK
JGI20152J14361_1002629033300001344Pelagic MarineMLNVDGKLKEKRISNKVKTAGYTLKRLKDNGFVVFKMFNAYSNIDPRRWTVLIDPGGASVYLTCHHNKDNLNEVLFEFDDGGNNFNRGFFLKTDSIESIVNTLIEKGVNNDATKNPFSKIK*
JGI20153J14318_1011200113300001351Pelagic MarineMQHTNWSEHKVKNKIKTAGYFIKRLKDNGFVVLKMFNAYSQVDPRRWSVLIDPGYHSVYVTCFTNKDEKNEVLFEFDDGGNRFKKGFYLKTDSIEAVVTLLIEKG
JGI24003J15210_1000002453300001460MarineMPGTNKNSYYHQKTDPTKLKEKKVSNKLKTAGYTIKRLKDNGLVVFKMFNAYSSIDPRRWTVLINPGSDSIYLTCYHNKDNINEIMFEFDDGGNNFNRGFFVKTESVEVLVSTLLDKGISNNPADNPFGVTK*
JGI24003J15210_10000049373300001460MarineMKKDWSEHKVKNKIKTAGYFIKRLKDNGFVVFKMFNAYAKSDPRRWSVLVDPGNHSVYVTCFTNKEQKGEVLFEFDDGGNHFNKGFYLKTDSIEVIINLLLEKGINNDATVNPFGLIK*
JGI24003J15210_1001669833300001460MarineMSKFDWSEHKVSNKIKTPGYFSKRLKDNGFVVLKIFNAYSSTDPRRWTVLVDPGLNSVFITCYTNKNEFKEVLFEFDDGGNRFKNGFYIKTNSIEVIINHLLEKNVNNIPEKNPFFKNFTK*
ACM2_107825923300001834Marine PlanktonMIRTKNNYYNRQPDPNKLKEKKIGNKVKTAGYTIKRLKDNGFVVFKMFNAYSNTDPRRWTVLINPGVDSVYLTCYHNKDNINEIMFEFDDGGNNFNRGFYVKTESVEVLVGTLIEKGISNNPADNPFSIT*
JGI25132J35274_101843933300002483MarineMQGPNSKGRLKEKKVSNKLKTAGYTIKRLKDNGFVVFKMFNAYSSMDPRRWTVLINPGGESIYLTCYHNKDDINEIMFEFDDGGNNFNRGFFVKTESIEVLVSTLIEKGVSNNPADNPFSSIK*
Ga0055584_10016121233300004097Pelagic MarineMLNKDGRLKEKRISNKLKTAGYTIKRLKDNGFVVFKMFNAYSTVDPRRWTIMINPGDASVYMTCHHNKDNLNEVLFELDDGGNNFNRGFFVKTDSIEVIVNELISKGVNNDPSKNPFSKLK*
Ga0066605_1000226793300004279MarineMQHTNWSEHKVKNKIKTAGYFIKRLKDNGFVVLKMFNAYSQVDPRRWSVLIDPGYHSVYVTCFTNKDEKNEVLFEFDDGGNRFKKGFYLKTDSIEAVVTLLIEKGVNNDPSKNPFSKIK*
Ga0066223_104966623300004461MarineMKDWSEHKVKNKIKTAGYFIKRLKDNGFVVLKMFNAYSEADPRRWCILVDPGYHSVFITCFTNKDEKGEVLFEFDDGGNNFKRGFYLKTDSIESVVTQLLEKGINNDPSKNPFSRTN*
Ga0073579_1190370593300005239MarineMFNAKKNSRYYQEAKSDKLKEKKVSNKLKTAGYTIKRLKDNGFVIFKMFNAYNQTDPRRWTVLINPGVDSIYLTCYHNKDNINEIMFEFDDGGNNFNRGFFVKTESVEVLVSTLIEKGISNDPADNPFSVTK*
Ga0073579_119057623300005239MarineMAGTNKNSYYHQKTDPTKLKEKKVSNKLKTAGYTIKRLKDNGLVVFKMFNAYSNVDPRRWTVLINPGSDSIYLTCYHNRDNINEIMFEFDDGGNNFNRGFFVKTESVEVLVSTLLDKGISNNPADNPFGVTK*
Ga0066830_1008786913300005433MarineMQGPNSKGRLKEKKVSNKLKTAGYTIKRLKDNGFVVFKMFNAYSSTDPRRWTVLINPGGESIYLTCYHNKDDINEIMFEFDDGGNNFNRGFFVKTESIEVLVSTLIEKGVGNNPADNPFSSIK*
Ga0075466_117719423300006029AqueousMQHTNWSEHKVKNKIKTAGYFIKRLKDNGFVVLKMFNAYSQVDPRRWSVLIDPGYHSVYVTCFTNKDEKNEVLFEFDDGGNRFKKGFYLKTDSIEAVVNLLIEKGVNNDPIKNPFSKIK*
Ga0098055_1001701213300006793MarineMLNKDGRLKEKKISNKLKTAGYTIKRLKDNGFVVFKMFNAYSTIDPRRWTIMINPGDASVYMTCHHNKDNLNEVLFELDDGGNNFNRGFFVKTDSIEVIVNELISKGVNNDPSKNPFSKLK*
Ga0070749_1071998913300006802AqueousMASRQESVRIKPISNKLKTAGYVIKRLKDNGFVVFKMFNAYNEADFRRWTVLIDPGRSSVFLTCFHNKDNINEIMFEFDDGGINFPRGFYVKTESVEVLVSHLIQKGISNDPDGNRFAKV
Ga0070748_100518993300006920AqueousMLNVDGKLKEKRISNKVKTAGYTLKRLKDNGFVVFKMFNAYSNIDPRRWTVLIDPGGSSVYLTCHHNKDNLNEVLFEFDDGGNNFNRGFFLKTDSIESIVNTLIEKGVNNDATKNPFSKIK*
Ga0070748_103580613300006920AqueousMQHTNWSEHKVKNKIKTAGYFIKRLKDNGFVVLKMFNAYSQVDPRRWSVLIDPGYHSVYVTCFTNKDEKNEVLFEFDDGGNRFKKGFYLKTDSIEAVVTLLIEKGVNNDPSKNPFNKIK*
Ga0098046_101999143300006990MarineKEKKISNKLKTAGYTIKRLKDNGFVVFKMFNAYSTIDPRRWTIMINPGDASVYMTCHHNKDNLNEVLFELDDGGNNFNRGFFVKTDSIEVIVNELISKGVNNDPSKNPFSKLK*
Ga0075468_1007775013300007229AqueousMLNVDGKLKEKRISNKVKTAGYTLKRLKDNGFVVFKMFNAYSNIDPRRWTVLIDPGGSSVYLTCHHNKDNLNEVLFEFDDGGNNFNRGFFLKTDSIESIVNTLIEKGVNNDATKNPFSK
Ga0075468_1013799323300007229AqueousMQHTNWSEHKVKNKIKTAGYFIKRLKDNGFVVLKMFNAYSQVDPRRWSVLIDPGYHSVYVTCFTNKDEKNEVLFEFDDGGNRFKKGFYLKTDSIEAVVTLLIEKGVNNDPSKNPFSKTK*
Ga0099847_101891143300007540AqueousLKRLKDNGFVVFKMFNAYSNIDPRRWTVLIDPGGSSVYLTCHHNKDNLNEVLFEFDDGGNNFNRGFFLKTDSIESIVNTLIEKGVNNDATKNPFSKIK*
Ga0099848_1000716113300007541AqueousMYTDNFSRVIKEKKISNKIKTAGYFIKRLKDCGFVVFKIFNAYGDTDPRKWTVLIDPGVSSVYVTCFINKNEVNEVLFEIDDGGNKFPKGIYFKTESIETLVTELINRGVSNNASENPFSKLK*
Ga0099848_102909843300007541AqueousMTSKKTYTLREKRVSNKIKTPGYTIKRLKDNGFVVLKIWNAYSNSDPRRWTILIDPAETSVFLTCYQNKDELNEVLFEFDDGGNNFTKGFFIKTDSVEVIINYLIEKGVNNNPAKSPFLNNK*
Ga0099848_123351723300007541AqueousMQKKLREKRISNKIKTAGYMIKRLRDNGFVTLKIFNAYSEADPRRWTILIDPGVSSVFLTCFHNKDDINEILFEFDDGGNNFKKGFYLKTDSVEVVINKLIDCNVNNNPENNPFTRK*
Ga0115549_106490933300009074Pelagic MarineMQHTNWSEHKVKNKIKTAGYFIKRLKDNGFVVLKMFNAYSQVDPRRWSVLIDPGYHSVYVTCFTNKDEKNEVLFEFDDGGNRFKKGFYLKTDSIEAVVTLLIEKGVNNDPTKNPFSKIK*
Ga0114918_10010441103300009149Deep SubsurfaceMLNQEGKLKVKRISNKVKTAGYTIKRLKDNGFVVFKMFNAYSNIDPRRWTVLIDPGGSSVYLTCHHNKDNLNEVLFEFDDGGNNFNRGFFHKTDSIESIVTTLIEKGVNNDASKNPFGKIK*
Ga0114918_1049683323300009149Deep SubsurfaceMLNKDGRLKEKRISNKLKTAGYTIKRLKDNGFVVFKMFNAYSTVDPRRWTIMINPGNESVYMTCHHNKDNLNEVLFEFDDGGNNFNRGFFVKTDSIEVLINELLEKGVNNDPTKNPFSKIK*
Ga0114918_1049742323300009149Deep SubsurfaceMQHTNWSEHKVKNKIKTAGYFIKRLKDNGFVVLKMFNAYSQVDPRRWSVLIDPGYHSVYVTCFTNKDEQNEVLFEFDDGGNRFKKGFYLKTDSIEAVVNLLIEKGVN
Ga0114998_1001419813300009422MarineMKDWSEHKVKNKIKTAGYFIKRLKDNGFVVLKMFNAYSEADPRRWSILVDPGYHSVFITCFTNKDEKGEVLFEFDDGGNNFKRGFYLKTDSIESVVTQLLEKGINNDPSKNPFSRTK*
Ga0115547_105598333300009426Pelagic MarineMQHTNWSEHKVKSKIKTAGYFIKRLKDNGFVVLKMFNAYSQVDPRRWSVLIDPGYHSVYVTCFTNKDEKNEVLFEFDDGGNRFKKGFYLKTDSIEAVVTLLIEKGVNNDPTKNPFSKIK*
Ga0115569_1006811243300009497Pelagic MarineMQHTNWSEHKVKNKIKTAGYFIKRLKDNGFVVLKMFNAYSQVDPRRWSVLIDPGYHSVYVTCFKNKDEKNEVLFEFDDGGNRFKKGFYLKTDSIEAVVTLLIEKGVNNDPTKNPFSKIK*
Ga0115103_142430123300009599MarineMANRRERAHAPKARIKRISNKLKTAGYVIKRLKDNGFVVFKMFNAYGEQDFRRWTVLIDPGRSSVFLTCFHNKDNINEIIFEFDDGGVNFPRGFYLKTESVEVLVSHLIQKGISNDPDGNRFAKV*
Ga0115103_152718443300009599MarineMANRQERAHAPKAKIKRISNKLKTAGYVIKRLKDNGFVVFKMFNAYGEQDFRRWTVLIDPGRSSVFLTCFHNKDNINEIIFEFDDGGVSFPRGFYLKTESVEVLVSHLIQKGISNDPDGNRFAKV*
Ga0115000_1008713613300009705MarineMFNAKKNSHFYKEAKSDKLKERKVSNKLKTAGYTIKRLKDNGFVIFKMFNAYNQTDPRRWTVLINPGVDSIYLTCYHNKDNINEIMFEFDDGGNNFNRGFFVKTESVEVLVSTLIEKGISNDPADNPFSVTK*
Ga0129345_101584033300010297Freshwater To Marine Saline GradientMLNKDGRLKEKRISNKLKTAGYTIKRLKDNGFVVFKIFNAYSTVDPRRWTIMINPGDESVYMTCHHNKDNLNEVLFEFDDGGNNFNRGFFVKTDSIEVLINELLEKGVSNDPTKNPFSKIK*
Ga0129342_101900013300010299Freshwater To Marine Saline GradientMLNKDGRLKEKRISNKLKTAGYTIKRLKDNGFVVFKIFNAYSTVDPRRWTIMINPGDESVYMTCHHNKDNLNEVLFEFDDGGNNFNRGFFVKTDSIEVLINELLEK
Ga0136656_108797423300010318Freshwater To Marine Saline GradientMLNKDGRLKEKRISNKLKTAGYTIKRLKDNGFVVFKIFNAYSTVDPRRWTIMINPGDESVYMTCHHNKDNLNEVLFEFDDGGNNFNRGFFVKTDSIEVLINELL
Ga0118731_11253973923300010392MarineMLNKDGRLKEKRISKLKTAGYTIKRLKDNGFVVFKMFNAYSTVDPRRWTIMINPGDASVYMTCHHNKDNLNEVLFELDDGGNNFNRGFFVKTDSIEVIVNELISKGVNN
Ga0118733_10365817423300010430Marine SedimentMLNKDGRLKEKRISNKLKTAGYTIKRLKDNGFVVFKMFNAYSTVDPRRWTIMINPGDASVYMTCHHNKDNLNEVLFELDDGGNNFNRGFFVKTDSIEVIVNELISKGVNN
Ga0181392_120545313300017749SeawaterPKAKIKRISNKLKTAGYVIKRLKDNGFVVFKMFNAYGEQDFRRWTVLIDPGRSSVFLTCFHNKDNINEIIFEFDDGGVSFPRGFYLKTESVEVLVSHLIQKGISNDPDGNRFAKV
Ga0181424_1035284913300017786SeawaterKTAGYTIKRLKDNGLVVFKMFNAYSSVDPRRWTVLINPGSDSIYLTCYHNKDNINEIMFEFDDGGNNFNRGFFVKTESVEVLVSTLLDKGISNNPADNPFGVTK
Ga0180437_1093636123300017963Hypersaline Lake SedimentMLNKDGRLKEKRISNKLKTAGYTIKRLKDNGFVVFKIFNAYSTVDPRRWTIMINPGNESVYMTCHHNKDNLNEVLFEFDDGGNNFNRGFFVKTDSIEVLINELLEKGVNNDPTKNPFSKI
Ga0180436_1020685623300017990Hypersaline Lake SedimentMQKKLKERQISNKIKTAGYTIKRLRDNGFVTLKIFNAYSDADPRRWSILIDPGVSSVYLTCYHNKDNLNEILFEFDDGGVRFKKGFYIKTDSVEVLINKLIENNINNDPEKSPFTRK
Ga0181563_1075270513300018420Salt MarshMLNVDGKLKEKRISNKVKTAGYTLKRLKDNGFVVFKMFNAYSNIDPRRWTVLIDPGGASVYLTCHHNKDNLNEVLFEFDDGGNNFNRGFFLKTDSIESIVNTLIEKGVNNDATKNPFSKI
Ga0188851_102470723300018682Freshwater LakeKDNGFVVFKMFNAYSTVDPRRWTIMINPGNESVYMTCHHNKDNLNEILFEFDDGGNNFNRGFFVKTDSIEVLINELLEKGVNNDPTKNPFSKIK
Ga0206125_10000049853300020165SeawaterMANRHEKVRVKRISNKLKTAGYVIKRLKDNGFVVFKMFNAYSEVDFRRWTILIDPGRSSVFLTCYHNKDNINEIMFEFDDGGINFPRGFYIQTESVEVLVSHLIQKGISNDPDGNRFAKV
Ga0206128_105937533300020166SeawaterMQHTNWSEHKVKNKIKTAGYFIKRLKDNGFVVLKMFNAYSQVDPRRWSVLIDPGYHSVYVTCFTNKDEKNEVLFEFDDGGNRFKKGFYLKTDSIEAVVTLLIEKGVNNDPSKNPFSKTK
Ga0206130_1009401143300020187SeawaterMQHTNWSEHKVKNKIKTAGYFIKRLKDNGFVVLKMFNAYSQVDPRRWSVLIDPGYHSVYVTCFTNKDEKNEVLFEFDDGGNRFKKGFYLKTDSIEAVVTLLIEKGVNNDPSKNPFNKIK
Ga0206130_1011703623300020187SeawaterMLNKDGRLKEKRISNKLKTAGYTIKRLKDNGFVVFKMLNAYSTVDPRRWTIMINPGDASVYMTCHHNKDNLNEVLFELDDGGNNFNRGFFVKTDSIEVIVNELISKGVNNDPSKNPFSKL
Ga0211559_1035361023300020442MarineMLGPNSKGKLKEKKISNKLKTAGYTIKRLKDNGFVVFKMFNAYNNTDPRRWTVLINPGVDSIYLTCYHNKDNINEIMFEFDDGGNHFNRGFYVKTESIEVLVSTLIEKGISNDPADNPFSVAK
Ga0211577_1036432623300020469MarineMAGTNKNSYYHQKTDPTKLKEKKVSNKLKTAGYTIKRLKDNGLVVFKMFNAYSSVDPRRWTVLINPGSDSIYLTCYHNKDNINEIMFEFDDGGNNFNRGFFVKTESVEVLVSTLLDKGISNNPADNPFGVTK
Ga0222717_10000326223300021957Estuarine WaterMLNKDGRLKEKRISNKLKTAGYTIKRLKDNGFVVFKMFNAYSTVDPRRWTIMINPGDASVYMTCHHNKDNLNEVLFELDDGGNNFNRGFFVKTDSIEVIVNELISKGVNNDPSKNPFSKL
Ga0222717_10001743213300021957Estuarine WaterMANRQERAHAPKAKIKRISNKLKTAGYVIKRLKDNGFVVFKMFNAYGEQDFRRWTVLIDPGRSSVFLTCFHNKDNINEIIFEFDDGGVSFPRGFYLKTESVEVLVSHLIQKGISNDPDGNRFAKV
Ga0222717_1003636043300021957Estuarine WaterMANRRERAHAPKARIKRISNKLKTAGYVIKRLKDNGFVVFKMFNAYGEQDFRRWTVLIDPGRSSVFLTCFHNKDNINEIIFEFDDGGVNFPRGFYLKTESVEVLVSHLIQKGISNDPDGNRFAKV
Ga0196903_103883913300022169AqueousNREDKVRVKRISNKLKTAGYVIKRLKDNGFVVFKMFNAYSESDSRRWTILIDPGRSSVFLTCFHNKDNINEIQFEFDDGGISFPRGFYVKTESVEVLVSHLIQKGISNDPDGNRFAKV
Ga0196905_108922123300022198AqueousMYTDNFSRVIKEKKISNKIKTAGYFIKRLKDCGFVVFKIFNAYGDTDPRKWTVLIDPGVSSVYVTCFINKNEVNEVLFEIDDGGNKFPKGIYFKTESIETLVTELINRGVSNNASENPFSKLK
Ga0196905_116757023300022198AqueousKRLKDNGFVVLKIWNAYSNSDPRRWTILIDPAETSVFLTCYQNKDELNEVLFEFDDGGNNFTKGFFIKTDSVEVIINYLIEKGVNNNPAKSPFLNNK
(restricted) Ga0233432_1002110033300023109SeawaterMANRQERAHAPKVKIKRISNKLKTAGYVIKRLKDNGFVVFKMFNAYGEQDFRRWTVLIDPGRSSVFLTCFHNKDNINEIIFEFDDGGVSFPRGFYLKTESVEVLVSHLIQKGISNDPDGNRFAKV
Ga0228696_102562723300023568SeawaterMLNKDGRLKEKKISNKLKTAGYTIKRLKDNGFVVFKMFNAYSTVDPRRWTIMINPGDASVYMTCHHNKDNLNEVLFELDDGGNNFNRGFFVKTDSIEVIVNELISKGVNNDPSKNPFSKL
Ga0228665_1000005763300024235SeawaterMQHTNWSEHKVKNKIKTAGYFIKRLKDNGFVVLKMFNAYSQVDPRRWSVLIDPGYHSVYVTCFTNKDEKNEVLFEFDDGGNRFKKGFYLKTDSIEVVVNLLIEKGVNNDPSKNPFSKTK
Ga0228665_100663733300024235SeawaterMQGPNSKGRLKEKKVSNKLKTAGYTIKRLKDNGFVVFKMFNAYSSMDPRRWTVLINPGGESIYLTCYHNKDDINEIMFEFDDGGNNFNRGFFVKTESIEVLVSTLIEKGVSNNPADNPFSSIK
Ga0210003_100088593300024262Deep SubsurfaceMLNQEGKLKVKRISNKVKTAGYTIKRLKDNGFVVFKMFNAYSNIDPRRWTVLIDPGGSSVYLTCHHNKDNLNEVLFEFDDGGNNFNRGFFHKTDSIESIVTTLIEKGVNNDASKNPFGKI
Ga0210003_100789943300024262Deep SubsurfaceMLNKDGRLKEKRISNKLKTAGYTIKRLKDNGFVVFKMFNAYSTVDPRRWTIMINPGNESVYMTCHHNKDNLNEVLFEFDDGGNNFNRGFFVKTDSIEVLINELLEKGVNNDPTKNPFSKI
Ga0228656_108657113300024322SeawaterKLKTAGYTIKRLKDNGFVVFKMFNAYSSMDPRRWTVLINPGGESIYLTCYHNKDDINEIMFEFDDGGNNFNRGFFVKTESIEVLVSTLIEKGVSNNPADNPFSSIK
Ga0244775_1006588023300024346EstuarineMANRQDKVRVKRISNKLKTAGYVIKRLKDNGFVVFKMFNAYSESDFRRWSILIDPGRSSVFLTCFHNKDNINEIMFEFDDGGSSFPRGFYVKTESVEVLVSHLIKKGISNDPDGNRFAKV
Ga0228650_104912833300024417SeawaterIKRLKDNGFVVFKMFNAYSSMDPRRWTVLINPGGESIYLTCYHNKDDINEIMFEFDDGGNNFNRGFFVKTESIEVLVSTLIEKGVSNNPADNPFSSIK
(restricted) Ga0255048_1018996613300024518SeawaterGFVVFKMFNAYSTVDPRRWTIMINPGDASVYMTCHHNKDNLNEVLFELDDGGNNFNRGFFVKTDSIEVIVNELISKGVNNDPSKNPFSKLK
Ga0208298_1001447153300025084MarineMLNKDGRLKEKKISNKLKTAGYTIKRLKDNGFVVFKMFNAYSTIDPRRWTIMINPGDASVYMTCHHNKDNLNEVLFELDDGGNNFNRGFFVKTDSIEVIVNELISKGVNNDPSKNPFSKL
Ga0209535_1000016753300025120MarineMPGTNKNSYYHQKTDPTKLKEKKVSNKLKTAGYTIKRLKDNGLVVFKMFNAYSSIDPRRWTVLINPGSDSIYLTCYHNKDNINEIMFEFDDGGNNFNRGFFVKTESVEVLVSTLLDKGISNNPADNPFGVTK
Ga0209535_1000027653300025120MarineMKKDWSEHKVKNKIKTAGYFIKRLKDNGFVVFKMFNAYAKSDPRRWSVLVDPGNHSVYVTCFTNKEQKGEVLFEFDDGGNHFNKGFYLKTDSIEVIINLLLEKGINNDATVNPFGLIK
Ga0209535_102259153300025120MarineMSKFDWSEHKVSNKIKTPGYFSKRLKDNGFVVLKIFNAYSSTDPRRWTVLVDPGLNSVFITCYTNKNEFKEVLFEFDDGGNRFKNGFYIKTNSIEVIINHLLEKNVNNIPEKNPFFKNFT
Ga0209348_1000766133300025127MarineMLDKKGKLKEKPISNKLKTAGYTIKRLKDNGFVVLKMFNAYAEADPRRWTVLIDPGRASIYLTCFHNREDFNEIMFEFDDGGNKFHRGTLIKTDSVEVLVTHLLQKGISNDPHGNPFFKS
Ga0209348_106534913300025127MarineMKKDWSEHKVKNKIKTPGYFIKRLKDNGFVVLKMFNAYNQADPRRWSCLIDPGVSSVYVTCFTNKDEKDEVLFEFDDGGNNFKKGFYLKTDSIEVIVNQLLEKGINNNPKE
Ga0209348_107765023300025127MarineMVDKKGKLKLKPISNKLKTAGYVIKRLKDNGFVVLKMFNAYSEADPRRWTVLIDPGRSSVYLTCFHNKEDFNEILFEFDDGGVKYNRGFFVKTESVEVLITNLIDRGIPTNPEGNPFAKS
Ga0209336_1009019923300025137MarineMPGTNKNSYYHQKTDPTKLKEKKVSNKLKTAGYTIKRLKDNGLVVFKMFNAYSSIDPRRWTVLINPGSDSIYLTCYHNKDNINEIMFEFDDGGNNFNRGFFVKTESVEVLVSTLLDKGISNNPADNP
Ga0209645_112185223300025151MarineMQGPNSKGRLKEKKVSNKLKTAGYTIKRLKDNGFVVFKMFNAYSSTDPRRWTVLINPGGESIYLTCYHNKDDINEIMFEFDDGGNNFNRGFFVKTESIEVLVSTLIEKGVGNNPADNPFSSIK
Ga0208303_1000379193300025543AqueousMANREDKVRVKRISNKLKTAGYVIKRLKDNGFVVFKMFNAYSESDSRRWTILIDPGRSSVFLTCFHNKDNINEIQFEFDDGGISFPRGFYVKTESVEVLVSHLIQKGISNDPDGNRFAKV
Ga0209094_104837423300025594Pelagic MarineMQHTNWSEHKVKNKIKTAGYFIKRLKDNGFVVLKMFNAYSQVDPRRWSVLIDPGYHSVYVTCFTNKDEKNEVLFEFDDGGNRFKKGFYLKTDSIEAVVTLLIEKGVNNDPTKNPFSKIK
Ga0208643_103129913300025645AqueousMLNVDGKLKEKRISNKVKTAGYTLKRLKDNGFVVFKMFNAYSNIDPRRWTVLIDPGGSSVYLTCHHNKDNLNEVLFEFDDGGNNFNRGFFLKTDSIESIVNTLIEKGVNNDATKNPFSKI
Ga0208161_102210243300025646AqueousMYTDNFSRVIKEKKISNKIKTAGYFIKRLKDCGFVVFKIFNAYGDTDPRKWTVLIDPGISSVYVTCFINKNEVNEVLFEIDDGGNKFPKGIYFKTESIETLVTELINRGVSNNASENPFSKLK
Ga0208134_106730933300025652AqueousMQHTNWSEHKVKNKIKTAGYFIKRLKDNGFVVLKMFNAYSQVDPRRWSVLIDPGYHSVYVTCFTNKDEKNEVLFEFDDGGNRFKKGFYLKTDSIEAVVNLLIEKGVNNDPIKNPFSKIK
Ga0209119_105430143300025860Pelagic MarineEKVRVKRISNKLKTAGYVIKRLKDNGFVVFKMFNAYSEVDFRRWTILIDPGRSSVFLTCYHNKDNINEIMFEFDDGGINFPRGFYIQTESVEVLVSHLIQKGISNDPDGNRFAKV
Ga0209335_10012190123300025894Pelagic MarineMLNVDGKLKEKRISNKVKTAGYTLKRLKDNGFVVFKMFNAYSNIDPRRWTVLIDPGGASVYLTCHHNKDNLNEVLFEFDDGGNNFNRGFFLKTDSIESIVNTLIEKGVNNDPTKNPFSKI
Ga0247594_108981613300026448SeawaterGYFIKRLKDNGFVVLKMFNAYSNADPRRWTVLVDPGYHSVYVTCFNNKDEKGDVLFEFDDGGNNFNKGFYLKTDSIEAVVTQLIEKGVNNDPSKNPFSKIK
Ga0228647_113985213300026505SeawaterMANRQDKVRVKRISNKLKTAGYVIKRLKDNGFVVFKMFNAYSESDFRRWSILIDPGRSSVFLTCFHNKDNINEIMFEFDDGGVNFPRGFYVKTESVEVLVSHLIKKGISNDPDGNRFAKV
Ga0207994_109169923300027416EstuarineMANRQDKVRVKRISNKLKTAGYVIKRLKDNGFVVFKMFNAYSESDFRRWSILIDPGRSSVFLTCFHNKDNINEIMFEFDDGGSSFPRGFYVKTESVEVLVSHLIK
Ga0209710_1001421223300027687MarineMKDWSEHKVKNKIKTAGYFIKRLKDNGFVVLKMFNAYSEADPRRWSILVDPGYHSVFITCFTNKDEKGEVLFEFDDGGNNFKRGFYLKTDSIESVVTQLLEKGINNDPSKNPFSRTK
(restricted) Ga0233415_1010442033300027861SeawaterMLNKDGRLKEKRISNKLKTAGYTIKRLKDNGFVVFKMFNAYSTVDPRRWTIMINPGDASVYMTCHHNKDNLNEVLFELDDGGNNFNRGFFVKTDSIEVIVNELISKGVNND
Ga0228674_101231513300028008SeawaterLINMANRQERAHAPKAKIKRISNKLKTAGYVIKRLKDNGFVVFKMFNAYGEQDFRRWTVLIDPGRSSVFLTCFHNKDNINEIIFEFDDGGVSFPRGFYLKTESVEVLVSHLIQKGISNDPDGNRFAKV
Ga0228621_100057143300028124SeawaterMRDWSERKVKNKIKTAGYFIKRLKDNGFVVLKMFNAYSNADPRRWTVLVDPGYHSVYVTCFNNKDEKGDVLFEFDDGGNNFNKGFYLKTDSIEAVVTQLIEKGVNNDPSKNPFSKIK
Ga0247572_112652723300028290SeawaterSKGRLKEKKVSNKLKTAGYTIKRLKDNGFVVFKMFNAYSSMDPRRWTVLINPGGESIYLTCYHNKDDINEIMFEFDDGGNNFNRGFFVKTESIEVLVSTLIEKGVSNNPADNPFSSIK
Ga0247572_114796923300028290SeawaterAGYFIKRLKDNGFVVLKMFNAYSNADPRRWTVLVDPGYHSVYVTCFNNKDEKGDVLFEFDDGGNNFNKGFYLKTDSIEAVVTQLIEKGVNNDPSKNPFSKIK
Ga0247566_106926623300028335SeawaterKGRLKEKKVSNKLKTAGYTIKRLKDNGFVVFKMFNAYSSMDPRRWTVLINPGGESIYLTCYHNKDDINEIMFEFDDGGNNFNRGFFVKTESIEVLVSTLIEKGVSNNPADNPFSSIK
Ga0228625_110985023300028419SeawaterGRLKEKKISNKLKTAGYTIKRLKDNGFVVFKMFNAYSTVDPRRWTIMINPGDASVYMTCHHNKDNLNEVLFELDDGGNNFNRGFFVKTDSIEVIVNELISKGVNNDPSKNPFSKLK
Ga0265309_1081640123300028599SedimentTNWSEHKVKNKIKTAGYFIKRLKDNGFVVLKMFNAYSQVDPRRWSVLIDPGYHSVYVTCFTNKDEKNEVLFEFDDGGNRFKKGFYLKTDSIEAVVTLLIEKGVNNDPTKNPFSKIK
Ga0183748_1002055133300029319MarineMVDKKGKLKEKPISNKLKTAGYTIKRLRDNGFVVLKMFNAYNNTDPRRWTVLIDPGRTSIYMTCFHNKENLNEILFEIDDGGVKFNRGFFIKTDSVEVLISTLIEKGIPSDPSGNPFYKA
Ga0183748_103381823300029319MarineMVDKKGKLKSKPVSNKLKTAGYFIKRLKDNGFVVLKMFNAYSEADPRRWTVLVDPGVSSVYINCLQNKEDFNEFMFEFSDGGNNFHHGFYLKTDSIEVIINELLKKGINNDPKQSPFGSI
Ga0183757_1000370193300029787MarineMLDKKGRLKEKPISNKLKTAGYTIKRLRDNGFVVLKMFNAYNNQDPRRWTVLIDPGRTSVYMTCFHNKENLNEILFEIDDGGVKFNRGFFIKTDSVEVLISALIEKGIPSDPSGNPFYKA
Ga0307380_1105588413300031539SoilMLNKDGRLKEKRISNKLKTAGYTIKRLKDNGFVVFKMFNAYSTVDPRRWTIMINPGNESVYMTCHHNKDNLNEILFEFDDGGNNFNRGFFVKTDSIEVLINELLEKGVNNDPTKNPF
Ga0307379_1060806023300031565SoilMLNKDGRLKEKRISNKLKTAGYTIKRLKDNGFVVFKMFNAYSTVDPRRWTIMINPGNESVYMTCHHNKDNLNEILFEFDDGGNNFNRGFFVKTDSIEVLINELLEKGVNNDPTKNPFSKI
Ga0307376_1032302933300031578SoilKRISNKLKTAGYTIKRLKDNGFVVFKMFNAYSTVDPRRWTIMINPGNESVYMTCHHNKDNLNEILFEFDDGGNNFNRGFFVKTDSIEVLINELLEKGVNNDPTKNPFSKIK
Ga0315316_1060424423300032011SeawaterMKKDWSEHKVKNKIKTAGYFIKRLKDNGFVVFKMFNAYAKSDPRRWSVLIDPGYHSVYVTCFTNKDEKGEVLFEFDDGGNHFNKGFYLKTDSIEVIINLLLEKGINNDATVNPFGLIK

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.