Metagenome / Metatranscriptome Family F098138

Basic Information
Family ID	F098138
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	44 residues
Representative Sequence	RVIVPAASGAPLERADGLSHLMQVQEVEDIRQALSAVLGAEP
Number of Associated Samples	94
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	96.15 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (58.654 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (17.308 % of family members)
Environment Ontology (ENVO)	Unclassified (20.192 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.115 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.24% β-sheet: 0.00% Coil/Unstructured: 54.76%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00730	HhH-GPD	38.46
PF00392	GntR	1.92
PF10431	ClpB_D2-small	0.96
PF00633	HHH	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	38.46
COG0177	Endonuclease III	Replication, recombination and repair [L]	38.46
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	38.46
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	38.46
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	38.46

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
All Organisms	root	All Organisms	41.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
cellular organisms	root	All Organisms → cellular organisms	41.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	39.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	39.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	30.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.85 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.92 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.85 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.92 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.85 %
Thermomonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora	0.96 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.85 %
Thermomonospora curvata	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora → Thermomonospora curvata	0.96 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.85 %
Frankia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp.	0.96 %
Thermomonospora curvata	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora → Thermomonospora curvata	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005167\|Ga0066672_10510981	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300005332\|Ga0066388_101996239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1040	Open in IMG/M
3300005354\|Ga0070675_100564193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1030	Open in IMG/M
3300005434\|Ga0070709_11133645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	626	Open in IMG/M
3300005435\|Ga0070714_101544374	Not Available	648	Open in IMG/M
3300005450\|Ga0066682_10435851	Not Available	835	Open in IMG/M
3300005456\|Ga0070678_101666880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	599	Open in IMG/M
3300005598\|Ga0066706_10686793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	813	Open in IMG/M
3300005614\|Ga0068856_101162237	Not Available	788	Open in IMG/M
3300005616\|Ga0068852_100712099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1014	Open in IMG/M
3300005843\|Ga0068860_102191067	Not Available	574	Open in IMG/M
3300006028\|Ga0070717_10609413	Not Available	990	Open in IMG/M
3300006163\|Ga0070715_10242480	Not Available	938	Open in IMG/M
3300006174\|Ga0075014_100502854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	678	Open in IMG/M
3300006176\|Ga0070765_100440040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1220	Open in IMG/M
3300006237\|Ga0097621_101577369	Not Available	624	Open in IMG/M
3300006804\|Ga0079221_10411017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	843	Open in IMG/M
3300006953\|Ga0074063_14284414	Not Available	503	Open in IMG/M
3300006954\|Ga0079219_10010351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3102	Open in IMG/M
3300009098\|Ga0105245_12876621	Not Available	534	Open in IMG/M
3300009520\|Ga0116214_1311010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	605	Open in IMG/M
3300009683\|Ga0116224_10100765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1400	Open in IMG/M
3300009698\|Ga0116216_10347393	Not Available	902	Open in IMG/M
3300009700\|Ga0116217_10151704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp.	1548	Open in IMG/M
3300010047\|Ga0126382_10910869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	762	Open in IMG/M
3300010341\|Ga0074045_10330333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	996	Open in IMG/M
3300010359\|Ga0126376_11491938	Not Available	704	Open in IMG/M
3300010373\|Ga0134128_12057863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	629	Open in IMG/M
3300010401\|Ga0134121_13274286	Not Available	501	Open in IMG/M
3300012207\|Ga0137381_10273501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1469	Open in IMG/M
3300012922\|Ga0137394_10541532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	987	Open in IMG/M
3300012929\|Ga0137404_10466948	Not Available	1122	Open in IMG/M
3300012929\|Ga0137404_10583016	Not Available	1004	Open in IMG/M
3300012989\|Ga0164305_11807571	Not Available	552	Open in IMG/M
3300013296\|Ga0157374_10998981	Not Available	856	Open in IMG/M
3300015371\|Ga0132258_11410821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora → Thermomonospora curvata	1759	Open in IMG/M
3300016319\|Ga0182033_11291491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	655	Open in IMG/M
3300016445\|Ga0182038_10773270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	840	Open in IMG/M
3300017924\|Ga0187820_1220106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	599	Open in IMG/M
3300017933\|Ga0187801_10453541	Not Available	538	Open in IMG/M
3300017937\|Ga0187809_10187636	Not Available	729	Open in IMG/M
3300017959\|Ga0187779_10504780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	800	Open in IMG/M
3300017974\|Ga0187777_11177162	Not Available	560	Open in IMG/M
3300017994\|Ga0187822_10182500	Not Available	691	Open in IMG/M
3300018037\|Ga0187883_10685163	Not Available	535	Open in IMG/M
3300018038\|Ga0187855_10585073	Not Available	650	Open in IMG/M
3300018044\|Ga0187890_10182042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1195	Open in IMG/M
3300018085\|Ga0187772_11350169	Not Available	528	Open in IMG/M
3300018433\|Ga0066667_10557666	Not Available	951	Open in IMG/M
3300020170\|Ga0179594_10351991	Not Available	559	Open in IMG/M
3300020581\|Ga0210399_10407854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1133	Open in IMG/M
3300021171\|Ga0210405_10129703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1993	Open in IMG/M
3300021180\|Ga0210396_11344746	Not Available	593	Open in IMG/M
3300021374\|Ga0213881_10564288	Not Available	518	Open in IMG/M
3300021401\|Ga0210393_11106540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	639	Open in IMG/M
3300021432\|Ga0210384_11259064	Not Available	644	Open in IMG/M
3300021432\|Ga0210384_11602968	Not Available	556	Open in IMG/M
3300021478\|Ga0210402_11857509	Not Available	528	Open in IMG/M
3300021560\|Ga0126371_13689625	Not Available	516	Open in IMG/M
3300025898\|Ga0207692_10466329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	797	Open in IMG/M
3300025901\|Ga0207688_10185817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1241	Open in IMG/M
3300025901\|Ga0207688_10335883	Not Available	929	Open in IMG/M
3300025912\|Ga0207707_10317598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1345	Open in IMG/M
3300025915\|Ga0207693_10704374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	782	Open in IMG/M
3300025916\|Ga0207663_11228349	Not Available	603	Open in IMG/M
3300025924\|Ga0207694_10961131	Not Available	723	Open in IMG/M
3300025928\|Ga0207700_10241159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1541	Open in IMG/M
3300027504\|Ga0209114_1110285	Not Available	514	Open in IMG/M
3300027696\|Ga0208696_1232856	Not Available	576	Open in IMG/M
3300027824\|Ga0209040_10352493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	698	Open in IMG/M
3300027895\|Ga0209624_10632480	All Organisms → cellular organisms → Bacteria → Proteobacteria	709	Open in IMG/M
3300028047\|Ga0209526_10374324	Not Available	950	Open in IMG/M
3300028536\|Ga0137415_11025920	Not Available	637	Open in IMG/M
3300028781\|Ga0302223_10224757	Not Available	619	Open in IMG/M
3300028808\|Ga0302228_10097163	Not Available	1381	Open in IMG/M
3300028828\|Ga0307312_11122936	Not Available	520	Open in IMG/M
3300028877\|Ga0302235_10146111	Not Available	1056	Open in IMG/M
3300028879\|Ga0302229_10044934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2229	Open in IMG/M
3300028879\|Ga0302229_10154578	Not Available	1061	Open in IMG/M
3300028879\|Ga0302229_10421175	Not Available	593	Open in IMG/M
3300029999\|Ga0311339_10160960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2615	Open in IMG/M
3300030007\|Ga0311338_11945199	Not Available	524	Open in IMG/M
3300030056\|Ga0302181_10364048	Not Available	629	Open in IMG/M
3300030503\|Ga0311370_11048029	Not Available	903	Open in IMG/M
3300030509\|Ga0302183_10194829	Not Available	791	Open in IMG/M
3300030524\|Ga0311357_10107185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2793	Open in IMG/M
3300030524\|Ga0311357_10523632	Not Available	1101	Open in IMG/M
3300030524\|Ga0311357_11031946	Not Available	721	Open in IMG/M
3300031233\|Ga0302307_10115640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1400	Open in IMG/M
3300031525\|Ga0302326_10896927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1261	Open in IMG/M
3300031525\|Ga0302326_12551333	Not Available	640	Open in IMG/M
3300031525\|Ga0302326_12847057	Not Available	596	Open in IMG/M
3300031778\|Ga0318498_10071567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1558	Open in IMG/M
3300031781\|Ga0318547_11027926	Not Available	515	Open in IMG/M
3300031996\|Ga0308176_12174449	Not Available	593	Open in IMG/M
3300032001\|Ga0306922_12090450	Not Available	549	Open in IMG/M
3300032008\|Ga0318562_10706712	Not Available	579	Open in IMG/M
3300032160\|Ga0311301_11582534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	799	Open in IMG/M
3300032893\|Ga0335069_11071039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	890	Open in IMG/M
3300032897\|Ga0335071_11296988	Not Available	673	Open in IMG/M
3300032898\|Ga0335072_11662643	Not Available	535	Open in IMG/M
3300033158\|Ga0335077_12046814	Not Available	530	Open in IMG/M
3300033158\|Ga0335077_12233838	Not Available	502	Open in IMG/M
3300034163\|Ga0370515_0362775	Not Available	612	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.46%
Host-Associated	Host-Associated	11.54%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.81%
Plants	Host-Associated → Plants	11.54%
Aquatic	Environmental → Aquatic	8.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.54%
Peat	Environmental → Terrestrial → Peat	17.31%
Freshwater	Environmental → Aquatic → Freshwater	7.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.85%
Sediment	Environmental → Aquatic → Sediment	0.96%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.96%
Roots	Host-Associated → Plants → Roots	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.46%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	17.31%
Loam	Environmental → Terrestrial → Soil → Loam	13.46%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.62%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.69%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.96%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.96%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.23%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	17.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.81%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.85%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.96%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.96%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	17.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.77%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.81%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.92%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.96%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.96%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.96%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.96%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027504	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028781	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066672_105109812	3300005167	Soil	RIAEAERMGFRRVIVPAASGAPLERADGLAGLMQVQEVEDIRQALSAVLGAES*
Ga0066388_1019962392	3300005332	Tropical Forest Soil	FRRVIVPAASGAPLERTDGVSGLTQVQEVEDIRQALSAVLGAEP*
Ga0070675_1005641932	3300005354	Miscanthus Rhizosphere	AEAERMGFRRVIVPAASGAPLERADGLSHLMQVQEVEDIRQALSAVLGAEP*
Ga0070709_111336453	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	AERMGFRRVIVPAASGAPLERADGLSHLMQVQEVEDIRQALSAVLGAEP*
Ga0070714_1015443742	3300005435	Agricultural Soil	IAEAERMGFRRVIVPAASGAPLERADGLSHLMQVQEVEDIRQALSAVLGAEP*
Ga0066682_104358512	3300005450	Soil	ERMGFRRVIVPAASGAPLERADGLTGPMQVQEVEDIRQALSAVLGAES*
Ga0070678_1016668803	3300005456	Miscanthus Rhizosphere	RVIVPAASGAPLERADGLSHLMQVQEVEDIRQALSAVLGAEP*
Ga0066706_106867931	3300005598	Soil	RVIVPAASGAPLERADGLSHLMQVQEVEDIRQPLSAVLGADP*
Ga0068856_1011622373	3300005614	Corn Rhizosphere	PAASGAPLERADGLSHLMQVQEVEDIRQALSAVLGAEP*
Ga0068852_1007120993	3300005616	Corn Rhizosphere	RMGFRRVIVPAASGAPLERADGLSHLMQVQEVEDIRQALSAVLGAEP*
Ga0068860_1021910672	3300005843	Switchgrass Rhizosphere	VIVPAASGAPLERADGLSHLMQVQEVEDIRQALSAVLGAESL*
Ga0070717_106094131	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	AEAERMGFRRVIVPAASGAPLERADGLSHLMQVQEVEDIRQALSAVLGSHP*
Ga0070715_102424801	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	GFRRVIVPAASGAPLERADGLAGLMQVQEVEDIRQALSAVLGAES*
Ga0075014_1005028542	3300006174	Watersheds	GAPLERADGLTHLMQVQEVEDIRQALSAVLGTDL*
Ga0070765_1004400401	3300006176	Soil	GAPLERVDGLPGLMQVQEVEDIRQALSAVLGADP*
Ga0097621_1015773692	3300006237	Miscanthus Rhizosphere	RVIVPAASGAPLERADGLTHLMQVQEVNDIRQALSAVLGGD*
Ga0079221_104110173	3300006804	Agricultural Soil	AERLGFRRVIVPAASGAPLERADGLAHLMKVEEVNDIRQALSAVLGGD*
Ga0074063_142844142	3300006953	Soil	ASGAPLERADGLSHLMQVQEVDDIRQALSAVLGAEP*
Ga0079219_100103514	3300006954	Agricultural Soil	IVPAASGAPLERADGLSHLMQVQEVEDIRQALSAVLGAEPLP*
Ga0105245_128766211	3300009098	Miscanthus Rhizosphere	LGFRRVIVPAASGAPLERADGLTHLMQVQEVNDIRQALSAVLGGD*
Ga0116214_13110103	3300009520	Peatlands Soil	AASGAPLERADGLTHLMQVQEVEDIRQALSAVLGTDL*
Ga0116224_101007653	3300009683	Peatlands Soil	LPRRLAEAERMGFRRVIVPAASGAPLERADGLTHLMQVQEVEDIRQALSAVLGTDL*
Ga0116216_103473932	3300009698	Peatlands Soil	SGAPLERADGLTHLMQVQEVEDIRQALSAVLGTDL*
Ga0116217_101517043	3300009700	Peatlands Soil	EAERMGFRRVIVPVASGAPLERADGLTHLMQVQEVEDIRQALSAVLGTEV*
Ga0126382_109108691	3300010047	Tropical Forest Soil	GAPLERADGLSHLMQVHEVEDIRRALSAVLGAEP*
Ga0074045_103303332	3300010341	Bog Forest Soil	LAEAERMGFRRVIVPAASGAPLERADGLTHLMQVQEVEDIRQALSAVLGTDL*
Ga0126376_114919381	3300010359	Tropical Forest Soil	ERLGFRRVIVPAASGAPLERADGLTHLMKVEEVNDIRQALSAVLGGD*
Ga0134128_120578632	3300010373	Terrestrial Soil	AASGAPLERADGLSHLMQVQEVEDIRQALSAVLGAEP*
Ga0134121_132742861	3300010401	Terrestrial Soil	ASGAPLERADGLSHLMQVQEVEDIRQALSAVLGAEP*
Ga0137381_102735013	3300012207	Vadose Zone Soil	VPAASGAPLERADGLAGPMQVQEVEDIRQALSAVLGAESL*
Ga0137394_105415322	3300012922	Vadose Zone Soil	AASGAPLERADGLSHLMHVQEVEDIRQALSAVLGAES*
Ga0137404_104669482	3300012929	Vadose Zone Soil	RIAEAERMGFRRVIVPAASGAPLERADGLSHLMQVQEVEDIRQALSAVLGAEP*
Ga0137404_105830161	3300012929	Vadose Zone Soil	IVPAASGAPLERADGLTHLMQVQEVNDIRQALSAVLGSD*
Ga0164305_118075711	3300012989	Soil	PAASGAPLERADGLSHLMQVLEVEDIRQALSAVLGSDL*
Ga0157374_109989811	3300013296	Miscanthus Rhizosphere	SGAPLERADGLSHLMEVQEVEDIRQALSAVLGAEP*
Ga0132258_114108213	3300015371	Arabidopsis Rhizosphere	EAERMGFRRVIVPAASGAPLERADGLSHLMRVEEVEDIRQALSAVLGAEPL*
Ga0182033_112914912	3300016319	Soil	PAASGAPLERADGLTHLMQVQEVEDIRQALSAVLGTAP
Ga0182038_107732701	3300016445	Soil	ASGAPMERTDGLSHPMQVQEVEDIRQALSAVLGTDP
Ga0187820_12201061	3300017924	Freshwater Sediment	ASGAPLERADGLTHLMQVQEVEDIRQALSAVLGTDL
Ga0187801_104535411	3300017933	Freshwater Sediment	RLAEAERMGFRRVIVPAASGAPLERADGLTHLMQVQEVEDIRQALSAVLGTAL
Ga0187809_101876361	3300017937	Freshwater Sediment	RRVIVPAASGAPLERADGLAHLMKVEEVNDIRQALSAVLGGD
Ga0187779_105047802	3300017959	Tropical Peatland	GFRRVIVPAASGAPLERADGLSHLMHVQEVEDIRQALSAVLGAEP
Ga0187777_111771621	3300017974	Tropical Peatland	PLERADGLSHLMQVQEVEDIRQALSAVLGGDGSDPR
Ga0187822_101825002	3300017994	Freshwater Sediment	EAERLGFRRVIVPAASGAPLERADGLSHLMQVQEVDDIRQALSAVLGAEP
Ga0187883_106851631	3300018037	Peatland	RMGFRRAIVPAASGGPLEPADGPSPLMQVVEVQDIRQALSAVLGTDL
Ga0187855_105850731	3300018038	Peatland	LAEAERMGFRRAIVPAASGGPLVPADGPSPLMQVVEVQDIRQALSAVLGTDL
Ga0187890_101820423	3300018044	Peatland	VVPAASGGPLEPADGPSPLMQVVEVQDIRQALSAVLGTDL
Ga0187772_113501692	3300018085	Tropical Peatland	FRRVIVPAASGAPLERADGLSHLMQVQEVEDIRQALSAVLGGDGSDPR
Ga0066667_105576661	3300018433	Grasslands Soil	MGFRRVIVPAASGAPLERADGLSHLMQVQEVEDIRQALSAVLGAEA
Ga0179594_103519912	3300020170	Vadose Zone Soil	AASGAPLERADGLSHLMQVQEVEDIRQALSAVLGAEP
Ga0210399_104078542	3300020581	Soil	IVPAASGAPLERADGLSHLMQVQEVEDIRQALSAVLGAEP
Ga0210405_101297033	3300021171	Soil	RRVIVPVASGAPLERADGLAGPMQVQEVEDIRQALSAVLGAEPL
Ga0210396_113447462	3300021180	Soil	AASGAPLERTDGLAGLMQVQEVEDIRQALSAVLGAESL
Ga0213881_105642882	3300021374	Exposed Rock	WRLAEAERLGFRRVIVPAASGAPLERADGLTHLMQVQEVNDIRQALSAVLGGD
Ga0210393_111065402	3300021401	Soil	ASGAPLERADGLSHLMQVHEVEDIRQALSAVLGTDL
Ga0210384_112590641	3300021432	Soil	RIAEAERMGFRRVIVPAASGAPLERADGLAGLMQVQEVEDIRQALSAVLGAEA
Ga0210384_116029681	3300021432	Soil	RLAEAERMGFRRVIVPAASGAPLERADGLTHLMQVQEVEDIRQALSAVLGTDP
Ga0210402_118575091	3300021478	Soil	SGAPLERADGLAGLMQVQEVEDIRQALSAVLGAEA
Ga0126371_136896251	3300021560	Tropical Forest Soil	EAERMGFRRVIVPAASGAPLERADGLSHLMKVQEVEDIRQALSAVLGAEPL
Ga0207692_104663291	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	AEAERMGFRRVIVPAASGAPLERADGLSHLMQVQEVEDIRQALSAVLGAEP
Ga0207688_101858171	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	ASGAPLERADGLSHLTQVQEVEDIRQALSAVLGAEP
Ga0207688_103358831	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	ASGAPLERADGLSHLMQVQEVEDIRQALSAVLGAEP
Ga0207707_103175982	3300025912	Corn Rhizosphere	VPAASGAPLERADGLSHLMQVQEVEDIRQALSAVLGAEP
Ga0207693_107043741	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	RMGFRRVIVPAASGAPLERADGLSHLMQVQEVEDIRQALSAVLGAEP
Ga0207663_112283491	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	RLGFRRVIVPAASGAPLERADGLTHLMQVQEVNDIRQALSAVLGGD
Ga0207694_109611311	3300025924	Corn Rhizosphere	SGAPLERADGLSHLMQVQEVEDIRQALSAVLGAEP
Ga0207700_102411591	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	FRRVIVPAASGAPLERADGLAGPMQVQEVEDIRQALSAVLGAESL
Ga0209114_11102852	3300027504	Forest Soil	AIVPMASGGPLERAEGLPHQMEVVEVEDVRQALSAVLGSVP
Ga0208696_12328562	3300027696	Peatlands Soil	LPRRLAEAERMGFRRVIVPAASGAPLERADGLTHLMQVQEVEDIRQALSAVLGTDL
Ga0209040_103524932	3300027824	Bog Forest Soil	PAASGAPLERADGLSHLMQVREVEDIRQALSAVLGTDL
Ga0209624_106324802	3300027895	Forest Soil	RLAEAERMGFRRAIVPAGPADPAGPADPGGPAGPTGSLQVVGVQDVRQALSAVLGTDLLPVELDR
Ga0209526_103743242	3300028047	Forest Soil	RLAEAERMGFRRVIVPMASGAPLERADGLSHLMKVEEVEDIRQALSAVLGTDLR
Ga0137415_110259201	3300028536	Vadose Zone Soil	AERMGFRRVIVPAASGAPLERADGVSGPTQVQEVEDIRQALSAVLGADP
Ga0302223_102247571	3300028781	Palsa	AERMGFRRAIVPAASGGPLEPADGPSPLMQVVEVQDIRQALSAVLGTDL
Ga0302228_100971631	3300028808	Palsa	RAIVPAASGGPLEPADGPSPLMQVIEVQDIRQALSAVLGTDL
Ga0307312_111229361	3300028828	Soil	VIVPAASGAPLERVDGPSSLMQVQEVEDIRQALSAVLGADP
Ga0302235_101461111	3300028877	Palsa	ASGGPLEPADGPSPLMQVVEVQDIRQALSAVLGTDL
Ga0302229_100449341	3300028879	Palsa	AASGGPLEPADGPSPLMQVVEVQDIRQALSAVLGTDL
Ga0302229_101545781	3300028879	Palsa	IVPAASGGPLEPADGPSPLMQVVEVQDIRQALSAVLGTDL
Ga0302229_104211751	3300028879	Palsa	LPQRLAEAERMGFRRAIVPAASGGPLEPADGPSPLMQVVEVQDIRQALSAVLGTDL
Ga0311339_101609601	3300029999	Palsa	RAIVPAASGGPLEPADGPSPLMQVVEVQDIRQALSAVLGTDL
Ga0311338_119451992	3300030007	Palsa	EAERMGFRRAIVPAASGGPLEPADGPSPLMQVVEVQDIRQALSAVLGTDL
Ga0302181_103640482	3300030056	Palsa	LTQRLAEAERLGFRRAIVPAASGEPLDRADGSASAMEVVEVADVRQALSAVLGTTP
Ga0311370_110480292	3300030503	Palsa	AEAERMGFRRAIVPAASGGPLEPADGPSPLMQVVEVQDIRQALSAVLGTDL
Ga0302183_101948292	3300030509	Palsa	VPAASGGPLEPADGPSPLMQVVEVQDIRQALSAVLGTDL
Ga0311357_101071854	3300030524	Palsa	MGFRRAIVPAASGGPLEPADGPSPLMQVVEVQDIRQALSAVLGTDL
Ga0311357_105236321	3300030524	Palsa	LAEAERMGFRRAIVPAASGGPLEPADGPSPLMQVVEVQDIRQALSAVLGTDL
Ga0311357_110319461	3300030524	Palsa	LGFRRAIVPAASGAPLDRADGSASAMEVVEVADVRQALSAVLGTTP
Ga0302307_101156401	3300031233	Palsa	RRAIVPAASGGPLEPADGPSPLMQVVEVQDIRQALSAVLGTDL
Ga0302326_108969271	3300031525	Palsa	IVPAASGAPLDRADGSASAMEVVEVADVRQALSAVLGTTP
Ga0302326_125513331	3300031525	Palsa	ALSQRLAEAERMGFRHAIVPAASGGILEHAEGPSRVMEVHEVQDIRQALSAVLGTTSGD
Ga0302326_128470571	3300031525	Palsa	GFRRAIVPAASGGPLEPADGPSPLMQVVEVQDIRQALSAVLGTDL
Ga0318498_100715673	3300031778	Soil	PAASGAPLERADGLSHLMRVEEVEDIRQALSAVLGAEPL
Ga0318547_110279262	3300031781	Soil	LPRRLAEAERMGFRRVIVPAASGAPMERTDGLSHPMQVQEVEDIRQALSAVLGTDP
Ga0308176_121744491	3300031996	Soil	IVPAASGAPLERVDGVSGLTQVQEVEDIRQALSAVLGAEP
Ga0306922_120904502	3300032001	Soil	ASGAPLERADGLTHLMQVQEVEDIRQALSAVLGSDV
Ga0318562_107067122	3300032008	Soil	VIVPAASGAPLERADGLSHLMQVEEVEDIRQALSAVLGAEPQ
Ga0311301_115825341	3300032160	Peatlands Soil	VPAASGAPLERADGLTHLMQVQEVEDIRQALSAVLGTDL
Ga0335069_110710392	3300032893	Soil	SGAPLERADGLSHLMQVQEVEDIRQALSAVLGADP
Ga0335071_112969882	3300032897	Soil	AEAERMGFRRVIVPAASGAPLERADGLSHLMRVEEVEDIRQALSAVLGAEPL
Ga0335072_116626431	3300032898	Soil	SGAPLERVDGVSGLTQVQEVEDIRQALSAVLGAEP
Ga0335077_120468142	3300033158	Soil	FRRVIVPAASGAPLERADGLSHLMQVEEVEDIRQALSAVLGAEPL
Ga0335077_122338382	3300033158	Soil	VIVPAASGAPLERTDGLAGLMQVQEVDDIRQALSAVLGAESL
Ga0370515_0362775_490_612	3300034163	Untreated Peat Soil	IVPAASGGSLEPADGSSQLMEVQEVQDIRQALSAVLGTDL

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098138

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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