Metagenome / Metatranscriptome Family F098125

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098125
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	78 residues
Representative Sequence	MAYLLPRTILVVIAWGVTCALIRRIWPSAEMPAFAFAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRFPLN
Number of Associated Samples	96
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	44.23 %
% of genes near scaffold ends (potentially truncated)	35.58 %
% of genes from short scaffolds (< 2000 bps)	88.46 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.577 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.077 % of family members)
Environment Ontology (ENVO)	Unclassified (21.154 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.769 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 68.83% β-sheet: 0.00% Coil/Unstructured: 31.17%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00557	Peptidase_M24	50.00
PF01321	Creatinase_N	8.65
PF04909	Amidohydro_2	7.69
PF11755	DUF3311	2.88
PF00990	GGDEF	2.88
PF06745	ATPase	1.92
PF13458	Peripla_BP_6	0.96
PF00474	SSF	0.96
PF01035	DNA_binding_1	0.96
PF02518	HATPase_c	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0006	Xaa-Pro aminopeptidase	Amino acid transport and metabolism [E]	8.65
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	0.96
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.58 %
Unclassified	root	N/A	14.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.58 %
Unclassified	root	N/A	14.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.58 %
Unclassified	root	N/A	14.42 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	60.58 %
Unclassified	root	N/A	14.42 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	8.65 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	57.69 %
Unclassified	root	N/A	14.42 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8.65 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	46.15 %
Unclassified	root	N/A	14.42 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8.65 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.92 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	15.38 %
Unclassified	root	N/A	14.42 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	8.65 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	4.81 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	2.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	15.38 %
Unclassified	root	N/A	14.42 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	8.65 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	3.85 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	2.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	15.38 %
Unclassified	root	N/A	14.42 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	8.65 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	2.88 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	2.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	15.38 %
Unclassified	root	N/A	14.42 %
Nocardioides humi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides humi	8.65 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2.88 %
Mesorhizobium sp. M7A.F.Ca.ET.027.03.2.1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M7A.F.Ca.ET.027.03.2.1	2.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003505\|JGIcombinedJ51221_10016729	All Organisms → cellular organisms → Bacteria → Proteobacteria	2511	Open in IMG/M
3300004092\|Ga0062389_100557691	Not Available	1303	Open in IMG/M
3300004152\|Ga0062386_100702827	Not Available	830	Open in IMG/M
3300005093\|Ga0062594_102286357	Not Available	587	Open in IMG/M
3300005366\|Ga0070659_101299025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	645	Open in IMG/M
3300005435\|Ga0070714_101838123	Not Available	591	Open in IMG/M
3300005435\|Ga0070714_102067808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	555	Open in IMG/M
3300005436\|Ga0070713_102417026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	508	Open in IMG/M
3300005437\|Ga0070710_10986392	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300005438\|Ga0070701_11122380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	554	Open in IMG/M
3300005439\|Ga0070711_102045452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	504	Open in IMG/M
3300005602\|Ga0070762_10872547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	612	Open in IMG/M
3300005610\|Ga0070763_10268903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	929	Open in IMG/M
3300005764\|Ga0066903_101005154	All Organisms → cellular organisms → Bacteria → Proteobacteria	1525	Open in IMG/M
3300005921\|Ga0070766_10227895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M7A.F.Ca.ET.027.03.2.1	1175	Open in IMG/M
3300005937\|Ga0081455_10515878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	799	Open in IMG/M
3300006162\|Ga0075030_100167683	All Organisms → cellular organisms → Bacteria	1774	Open in IMG/M
3300006163\|Ga0070715_10357764	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300006172\|Ga0075018_10662638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	561	Open in IMG/M
3300006175\|Ga0070712_100704308	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300006354\|Ga0075021_11184893	Not Available	502	Open in IMG/M
3300006871\|Ga0075434_102215947	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300009098\|Ga0105245_11517123	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300009101\|Ga0105247_11503963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	549	Open in IMG/M
3300009522\|Ga0116218_1028855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2485	Open in IMG/M
3300009698\|Ga0116216_10651379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	634	Open in IMG/M
3300010043\|Ga0126380_11446410	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300010046\|Ga0126384_11259593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	684	Open in IMG/M
3300010154\|Ga0127503_10619126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	523	Open in IMG/M
3300010361\|Ga0126378_12341673	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300010376\|Ga0126381_100662671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides humi	1490	Open in IMG/M
3300010398\|Ga0126383_10417511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1383	Open in IMG/M
3300012958\|Ga0164299_10109617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1453	Open in IMG/M
3300012985\|Ga0164308_11336721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	652	Open in IMG/M
3300014325\|Ga0163163_10928363	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300015371\|Ga0132258_13339085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1103	Open in IMG/M
3300016270\|Ga0182036_11278413	Not Available	612	Open in IMG/M
3300016270\|Ga0182036_11340466	Not Available	598	Open in IMG/M
3300016294\|Ga0182041_10511585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1043	Open in IMG/M
3300016341\|Ga0182035_11137032	Not Available	696	Open in IMG/M
3300016445\|Ga0182038_10256747	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M
3300017822\|Ga0187802_10102318	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300017924\|Ga0187820_1045584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1175	Open in IMG/M
3300017933\|Ga0187801_10149248	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300017943\|Ga0187819_10131360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1493	Open in IMG/M
3300017943\|Ga0187819_10232730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides humi	1081	Open in IMG/M
3300017947\|Ga0187785_10193741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	881	Open in IMG/M
3300017955\|Ga0187817_10043037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2768	Open in IMG/M
3300017970\|Ga0187783_10032225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3882	Open in IMG/M
3300017972\|Ga0187781_10001829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16194	Open in IMG/M
3300017972\|Ga0187781_10011984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6187	Open in IMG/M
3300017974\|Ga0187777_11303129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	534	Open in IMG/M
3300018006\|Ga0187804_10200074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	853	Open in IMG/M
3300018007\|Ga0187805_10124223	Not Available	1171	Open in IMG/M
3300018058\|Ga0187766_10122339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1596	Open in IMG/M
3300018062\|Ga0187784_11108692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	628	Open in IMG/M
3300018064\|Ga0187773_10991358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	550	Open in IMG/M
3300020579\|Ga0210407_10594450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides humi	863	Open in IMG/M
3300020580\|Ga0210403_10399912	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300020581\|Ga0210399_10079850	All Organisms → cellular organisms → Bacteria	2657	Open in IMG/M
3300020583\|Ga0210401_10318467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1416	Open in IMG/M
3300020583\|Ga0210401_10760630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	829	Open in IMG/M
3300020583\|Ga0210401_11540645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	522	Open in IMG/M
3300021088\|Ga0210404_10219057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1026	Open in IMG/M
3300021170\|Ga0210400_10008508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	8391	Open in IMG/M
3300021171\|Ga0210405_10345135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M7A.F.Ca.ET.027.03.2.1	1175	Open in IMG/M
3300021402\|Ga0210385_10100976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2013	Open in IMG/M
3300021403\|Ga0210397_10041069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2931	Open in IMG/M
3300021406\|Ga0210386_11225057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	634	Open in IMG/M
3300021432\|Ga0210384_10331677	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300022529\|Ga0242668_1029704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides humi	883	Open in IMG/M
3300025898\|Ga0207692_10805618	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300025915\|Ga0207693_11313910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	540	Open in IMG/M
3300025932\|Ga0207690_11159963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	645	Open in IMG/M
3300025933\|Ga0207706_10946683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	726	Open in IMG/M
3300025972\|Ga0207668_11773048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	557	Open in IMG/M
3300026984\|Ga0208732_1017816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	627	Open in IMG/M
3300027568\|Ga0208042_1079441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	833	Open in IMG/M
3300027915\|Ga0209069_10136266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides humi	1210	Open in IMG/M
3300029636\|Ga0222749_10362911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	761	Open in IMG/M
3300030494\|Ga0310037_10307276	Not Available	674	Open in IMG/M
3300031231\|Ga0170824_114795274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1922	Open in IMG/M
3300031546\|Ga0318538_10337221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	814	Open in IMG/M
3300031715\|Ga0307476_10510503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides humi	891	Open in IMG/M
3300031719\|Ga0306917_10340751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides humi	1164	Open in IMG/M
3300031744\|Ga0306918_10318447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1202	Open in IMG/M
3300031753\|Ga0307477_10145439	All Organisms → cellular organisms → Bacteria	1654	Open in IMG/M
3300031754\|Ga0307475_10871868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	712	Open in IMG/M
3300031781\|Ga0318547_10528704	Not Available	729	Open in IMG/M
3300031781\|Ga0318547_10705478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	627	Open in IMG/M
3300031782\|Ga0318552_10588773	Not Available	568	Open in IMG/M
3300031890\|Ga0306925_11579854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	639	Open in IMG/M
3300031910\|Ga0306923_10289288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1873	Open in IMG/M
3300031910\|Ga0306923_12104171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	569	Open in IMG/M
3300031912\|Ga0306921_10350646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1726	Open in IMG/M
3300031942\|Ga0310916_10495259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides humi	1041	Open in IMG/M
3300031947\|Ga0310909_11139454	Not Available	633	Open in IMG/M
3300031954\|Ga0306926_10292653	All Organisms → cellular organisms → Bacteria → Proteobacteria	2016	Open in IMG/M
3300031962\|Ga0307479_10895522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides humi	860	Open in IMG/M
3300032035\|Ga0310911_10165791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M7A.F.Ca.ET.027.03.2.1	1248	Open in IMG/M
3300032051\|Ga0318532_10323582	Not Available	547	Open in IMG/M
3300032059\|Ga0318533_10796195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	694	Open in IMG/M
3300032076\|Ga0306924_10514154	Not Available	1363	Open in IMG/M
3300032160\|Ga0311301_10075145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7044	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.38%
Host-Associated	Host-Associated	9.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.96%
Aquatic	Environmental → Aquatic	14.42%
Plants	Host-Associated → Plants	9.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.96%
Freshwater	Environmental → Aquatic → Freshwater	10.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.73%
Sediment	Environmental → Aquatic → Sediment	3.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.92%
Roots	Host-Associated → Plants → Roots	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.88%
Loam	Environmental → Terrestrial → Soil → Loam	15.38%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.88%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.96%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	40.38%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.62%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.96%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.50%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.69%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.81%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.81%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.88%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.92%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.96%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026984	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF048 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ51221_100167292	3300003505	Forest Soil	VGHYLGLXXAYLLPRTILVVIAWGVTCALIRRXWPSAEMPAFAFAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRFPLN*
Ga0062389_1005576911	3300004092	Bog Forest Soil	MAYLLPRTILVVIAWGVTCALIRRIWPSADMPTSAIAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRFPLN*
Ga0062386_1007028272	3300004152	Bog Forest Soil	MAYLLPRTILVVIAWGVTCALIRRIWPSAEMPAFAIAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRCR*
Ga0062594_1022863572	3300005093	Soil	MAYLLPRTILVVIAWGVTCALMRRIWPSAEIPAFAAAGASWLVVGVAYFGYLNKLRRDIAQLERARSYTYARRFPLN*
Ga0070659_1012990252	3300005366	Corn Rhizosphere	LAVCHYLELLMAYLLPRTILVVIAWGVTCALIRRIWPSAEIPAFAAAGASWLVVGVAYFGYLNKLRRDIAQLERARSYTYARRFPLN*
Ga0070714_1018381232	3300005435	Agricultural Soil	VGHYLGLPMAYLLPRTILVVIAWGVTCALIRRIWPSAEMPAFAFAGATWLAAGVAYFGYLNKLRRDIVRLER
Ga0070714_1020678082	3300005435	Agricultural Soil	MAYLLPRTILVFIAWAVSCALIRRFWPSAELPIFALAGASWLTAGVAYFGYLYKLRRDIAQLERALCYSRARRSPPD*
Ga0070713_1024170262	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LELLMAYLLPRTILVVIAWGVTCALMRRIWPSAEIPAFAAAGASWLVVGVAYFGYLNKLRRDIAQLERARSYTYARRFPLN*
Ga0070710_109863922	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	YLLPRTILVVIAWGVTCALIRRIWPSAEMPAFAFAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRFPLN*
Ga0070701_111223801	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MAYLLPRTILVVIAWGATCALMRRIWPSAEIPAFAAAGASWLVVGVAYFGYLNKLRRDIAQLERARSYTYARRFPLN*
Ga0070711_1020454521	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MAYLLPRTILVFTAWAVSCALIRRVWPSAEMPIFALAGASWLTAGVAYFGYLYKLRRDIAQLERALCYSRARRSPPD*
Ga0070762_108725471	3300005602	Soil	MAYLLPRTILVVIAWGVTCALIRRIWPSAEMPAFAFAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRFPLN*
Ga0070763_102689032	3300005610	Soil	VGHYLGLPMAYLLPRTILVVIAWGVTCALIRRIWPSAEMPAFAIAGATWLAVGVAYFGYLNKLRRDIVRLERARNYT
Ga0066903_1010051541	3300005764	Tropical Forest Soil	MRGTRNWGLLTVIRQAGERHYLGLLTRTILVVIVWGVSCALIRRIWPSAEMPIFALAGITWLAAGMAHCGYSNKLRRD
Ga0070766_102278951	3300005921	Soil	MAYLLPRTILVVIAWGVTCALIRRIWPSAEMPAFAIAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRFPLN*
Ga0081455_105158781	3300005937	Tabebuia Heterophylla Rhizosphere	LPRTMLVVIAWGVTCAAIKRIWPSAEMPAFAAAGASWLIAGVAYFGYLSKLRRDIAQLERARSYTYVRRFPLN*
Ga0075030_1001676831	3300006162	Watersheds	LGLPMAYLLPRTILVVIAWGVTCALIRRIWPSAEMPAFAIAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRCR*
Ga0070715_103577642	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VGHYLGLPMAYLLPRTILVVIAWGVTCALIRRIWPSAEMPAFAFAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRR
Ga0075018_106626382	3300006172	Watersheds	AWGVTCALIRRIWPSADMPTFAIAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRFPLN*
Ga0070712_1007043082	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VGHYLGLPMAYLLPRTILVVIAWGVTCALIRRIWPSAEMPAFAFAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRFPLN*
Ga0075021_111848932	3300006354	Watersheds	MAYLLPRTILVVIAWGVTCALIRRIWPSADMPTFAIAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRR
Ga0075434_1022159472	3300006871	Populus Rhizosphere	MAYLLPRTILVVIAWGVTCALIRRIWPSAEIPAFAAAGASWLVVGVAYFGYLNKLRRDIAQLERARSYTYARRFPLN*
Ga0105245_115171231	3300009098	Miscanthus Rhizosphere	MAYLLPRTVLVVIAWGVTCALMRRIWPSAEIPAFAAAGASWLVVGVAYFGYLNKLRRDIAQLERARSYTYARRFPLN*
Ga0105247_115039631	3300009101	Switchgrass Rhizosphere	MAYLLPRTILVFTAWAVSCALIRRVWPSAEMPIFALAGASWLTAGVAYFGYLHKLRRDIAQLERALRYSEVRRFPFN*
Ga0116218_10288552	3300009522	Peatlands Soil	MAYLLPRTILVIIAWMVTCALIRHVWPTADSAIFAVAGASWMAAGAAYFGYLRKLRRDIEQLERARAYTRDRRFHLN*
Ga0116216_106513792	3300009698	Peatlands Soil	MAYLLPRTILVVIAWGVTCALIRRIWPSAEMPAFAIAGATWLAVGVAYFGYLNKLRRDIVRLERARSYTYVRRCR*
Ga0126380_114464102	3300010043	Tropical Forest Soil	MAYLLPRTILVVIVWGVSCALIRRIWPSAEMPIFALAGITWLAAGMAYCGYSNKLRRDIVQLERAHGCTRTPSAFR*
Ga0126384_112595932	3300010046	Tropical Forest Soil	MAYLLPRTILVFIAWAVSCALIRRLWPSAELPIFAVAGATWLAAGVAYFGYLYKLRRDIAELERALCYSRARRSPPD*
Ga0127503_106191261	3300010154	Soil	GTFNIHHYLGLPMAYLLPRTILVVIAWGVTCALIRRIWPSAEMPAFAFAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRFPLN*
Ga0126378_123416732	3300010361	Tropical Forest Soil	RTILVVIVWGVSCALIRRIWPSAEMPIFALAGITWLAAGMAYCGYSNKLRRDLVQLERALGCTRTPSAFR*
Ga0126381_1006626712	3300010376	Tropical Forest Soil	LLTRTILVVIVWGVSCALIRRIWPSAEMPIFALAGITWLAAGMVYCGYSNKLRRDIVQLERALGCTRTPSAFR*
Ga0126383_104175112	3300010398	Tropical Forest Soil	MAYLLPRTILVVIVWGVSCALIRRIWPSAEMPIFALAGITWLAAGMVYCGYSNKLRRDIVQLERALGCARTPSAFR*
Ga0164299_101096173	3300012958	Soil	LPMAYLLPRTILVVIAWGVTCALIRRIWPSAEMPAFAFAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRFPLN*
Ga0164308_113367211	3300012985	Soil	ALSVGHYLGLPMAYLLPRTILVVIAWGVTCALIRRIWPSAEMPAFAFAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRFPLN*
Ga0163163_109283631	3300014325	Switchgrass Rhizosphere	MAYLLPRTILVFIAWAVSCALIRRFWPSAELPIFALAGASWLTAGVAYFGYLHKLRRDIAQLERALRYSEVRRFPFN*
Ga0132258_133390852	3300015371	Arabidopsis Rhizosphere	MAYLLPRTILVFIAWALSCALIRRLWPSAELPIFALAGASWLTAGVAYFGYLYKLRRDIAQLERALCCSRARRFPLD*
Ga0182036_112784132	3300016270	Soil	MCHYLVLAMAHLLPRTILVFIITCALIRRIWPSAEMPIFAVAGATWLAAGVAYFSYLSKLRRDIVRLE
Ga0182036_113404662	3300016270	Soil	MDYLLPRTILVVIGWCISCALIRRVWPSADIAVFALAGASWLAAGVAYFGYLHKLRRDIVRLERALGYSSPRHSAFN
Ga0182041_105115852	3300016294	Soil	MCHYLVLAMAHLLPRTILVFIAWGITCALIMRIWPSAEMPIFAVAGATWLAAGVAYFSFLSKLRRDIVRLERARGYAYIRRFPPD
Ga0182035_111370322	3300016341	Soil	MAYLLPRTVLLVIAWVATCAVIRRVWPSAEMPIFAVVGAICFAAGTAYFGYLHKLRRDIAQLERARFYTGIRRLPRD
Ga0182038_102567474	3300016445	Soil	MCHYLVLAMAHLLPRTILVFIAWGITCALIMRIWPSAEMPIFAVAGATWLAAGVAYFSYLSKLRRDIVRLERARGY
Ga0187802_101023182	3300017822	Freshwater Sediment	MAYLLPRTILVVIAWGVTCALIRRIWPSAEMPAFAIAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRCR
Ga0187820_10455842	3300017924	Freshwater Sediment	MAYLLPRTILVVIAWGVTCALIRRIWPSAEMPAFAIAGATWLAVGVAYFGYLNKLRRDIVRLERARSFTYVRRCR
Ga0187801_101492482	3300017933	Freshwater Sediment	MAYLLPRTILVIIAWMVTCALIRHVWPTADSAIFAVAGASWVAAGAAYFGYLRKLRRDIEQIERARAYTRDRRFHLN
Ga0187819_101313602	3300017943	Freshwater Sediment	MAYLLPRTILVIIAWMVTCALIRHVWPTADSAIFAVAGASWVAAGAAYCGYLRKLRRDIEQLERARAYTRDRRFHLN
Ga0187819_102327302	3300017943	Freshwater Sediment	MAYLLPRTILVVIAWGVTCALIRRIWPSAEMPAFAIAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRFPLN
Ga0187785_101937411	3300017947	Tropical Peatland	MAYLLPRTILVFTAWAVSCALIRRIWPSAEMPIFALAGASWLTAGAAYFGYLYKLRRDIAELERALCYSRARRSPPD
Ga0187817_100430373	3300017955	Freshwater Sediment	VRHYLGLPMAYLLPRTILVVIAWGVTCALIRRIWPSAEMPAFAIAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRCR
Ga0187783_100322253	3300017970	Tropical Peatland	MVYLLPRTILIVIAWVGACALIKRVWPSAEMPVFAAAGATCFAAGTAYFAYLQKLRRDIAQLERSRFYTHVRRFPQD
Ga0187781_100018297	3300017972	Tropical Peatland	LSAYRYLGLLMGYLLPRTILIVIAWALSCALIRRVWPSAEMPIFTLAGATWFAAGAAYFGYLHKLRRDIEQLERARFYIRVRRFPLD
Ga0187781_100119845	3300017972	Tropical Peatland	MGYLLPRTILVVIGWGITCALIRRVWPSADIPIFALAGASWLAAGVAYFGYLRKLRRDIVQLERALGYSSSRHSSFS
Ga0187777_113031292	3300017974	Tropical Peatland	MLVVCYDLGLPMDYLLPRTILVVIGWFISCALIRRVWPSADIAVFALAGASWLAAGVAYFGYLHKLRRDIVRLERALGYSSPRHSAFN
Ga0187804_102000742	3300018006	Freshwater Sediment	MAYLLPRTILVVIAWGVTCALIRRIWPSAEMPAFAIAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYIRRFPLN
Ga0187805_101242232	3300018007	Freshwater Sediment	PRTILVVIAWGVTCALIRRIWPSAEMPAFAIAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRFPLN
Ga0187766_101223392	3300018058	Tropical Peatland	MIHNSNGSSMAYLLPRTVLLVIAWVAACALIKRVWPSAEMPVFAVAGATCFAAGTAYFGYLHKLRRDIAELERARFYTGIRRLPRD
Ga0187784_111086922	3300018062	Tropical Peatland	VYRYLGLLMGYLLPRTILIVIAWALSCALIRRVWPSAEMPIFTLAGATWFAAGAAYFGYLHKLRRDIEQLERARFYIRVRRFPLD
Ga0187773_109913581	3300018064	Tropical Peatland	MAYLLPRTILVFTAWAVSCALIRRIWPSATIFALAGASWLTAGVAYFGYLHKLRRDIAQLERALRYSKVRRFPFN
Ga0210407_105944502	3300020579	Soil	LGLPMAYLLPRTILVVIAWGVTCALIRRIWPSAEMPAFAFAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRFPLN
Ga0210403_103999122	3300020580	Soil	MAYLLPRTFLVVIAWGVICALIRRIWLSADMPTSAIAGGTWLAAGVAYFGYLNKLRRDIVRLERARSYAYVRRFPLN
Ga0210399_100798502	3300020581	Soil	MAYLLPRTILVVIAWGVTCALIRRIWPSAEMPAFAFAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRFPLN
Ga0210401_103184672	3300020583	Soil	HYLGLPMAYLLPRTILVVIAWGVTCALIRRIWPSAEMPAFAFAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRFPLN
Ga0210401_107606301	3300020583	Soil	MDYLLPRTILVVIAWGVTCALIKRIWPSAEMPAFAFAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRFPLN
Ga0210401_115406452	3300020583	Soil	MDYLLPRTILVVIGWGISCALIRRVWPSADIAVFALAGASWLAAGVAYFGYLHKLRRDIVQLERALGYSSPRHSAFN
Ga0210404_102190572	3300021088	Soil	VGHYLGLATAYLLPRTILVVIAWGVTCALIRRIWPSAEMPAFAFAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRFPLN
Ga0210400_100085082	3300021170	Soil	VGHYLGLPMAYLLPRTILVVIAWGVTCALIRRIWPSAEMPAFAFAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRFPLN
Ga0210405_103451352	3300021171	Soil	MAYLLPRTILVVIAWGVSCALIKRIWPSAEMPIFAVAGATWLAAGVAYFSYLSKLRRDIVRLKRARSYTYIRRFPPN
Ga0210385_101009763	3300021402	Soil	VGHYLGLPTAYLLPRTILVVIAWGVTCALIRRIWPSAEMPAFAFAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRFPLN
Ga0210397_100410691	3300021403	Soil	VGHYLGLPMAYLLPRTILVVIAWGVTCALIKRIWPSAEMPAFAFAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRFPLN
Ga0210386_112250572	3300021406	Soil	FIARHYLGLLMAYLLPRTILVVIAWGVSCALIKRIWPSAEMPIFAVAGATWLAAGVAYFSYLSKLRRDIVRLKRARSYTYIRRFPPN
Ga0210384_103316772	3300021432	Soil	MAYLLPRTILVVTCALIRRIWPSAEMPAFAFAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRFPLN
Ga0242668_10297042	3300022529	Soil	VIAWGVTCALIRRIWPSAEMPAFAFAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRFPLN
Ga0207692_108056182	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	YLLPRTILVVIAWGVTCALIRRIWPSAEMPAFAFAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRFPLN
Ga0207693_113139102	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	TTAPGASRRRVHAMTARTILVVIAWGVTCALIRRIWPSAEMPAFAFAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRFPLN
Ga0207690_111599632	3300025932	Corn Rhizosphere	LAVCHYLELLMAYLLPRTILVVIAWGVTCALMRRIWPSAEIPAFAAAGASWLVVGVAYFGYLNKLRRDIAQLERARSYTYARRFPLN
Ga0207706_109466831	3300025933	Corn Rhizosphere	MAYLLPRTILVVIAWGVTCALIRRIWPSAEIPAFAAAGASWLVVGVAYFGYLNKLRRDIAQLERARSYTYARRFPLN
Ga0207668_117730482	3300025972	Switchgrass Rhizosphere	MAYLLPRTILVVIAWGVTCALMRRIWPSAEIPAFAAAGASWLVVGVAYFGYLNKLRRDIAQLERARSYTYARRFPLN
Ga0208732_10178162	3300026984	Forest Soil	LRLLPRTILVVIAWGVTCALIGRIWPSAEMPAFAFAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRFPLN
Ga0208042_10794412	3300027568	Peatlands Soil	MAYLLPRTILVIIAWMVTCALIRHVWPTADSAIFAVAGASWMAAGAAYFGYLRKLRRDIEQLERARAYTRDRRFHLN
Ga0209069_101362661	3300027915	Watersheds	MAYLLPRTILVVIAWGVTCALIRRIWPSADMPTFAIAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRCR
Ga0222749_103629111	3300029636	Soil	GSVNRNQALSVGHYLGLPMAYLLPRTILVVIAWGVTCALIRRIWPSAEKPAFAFAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRFPLN
Ga0310037_103072761	3300030494	Peatlands Soil	MAYLLPRTILVIIAWMVTCALIRHVWPTADSAIFAVAGASWMAAGAAYFGYLRKLRRDIEQLERARAYTRDRRFHL
Ga0170824_1147952743	3300031231	Forest Soil	MAYLLPRTILVVIAWGVTCALIRRIWPSAEMPAFAIAGATWLAAGVAYFGYLNKLRRDIVRLERARNYTYVRRFPLN
Ga0318538_103372211	3300031546	Soil	MCHYLGLAMAHVLPRTILVFIAWGITCALIRRIWPSAEMPIFAVAGATWLAAGVAYFSYLSKLRRDIVRLERARGYAYIRRFPPD
Ga0307476_105105032	3300031715	Hardwood Forest Soil	ILVVIAWGVSCALIKRIWPSAEMPIFAVAGATWLAAGVAYFSYLSKLRRDIVRLKRARSYTYIRRFPPN
Ga0306917_103407512	3300031719	Soil	MCHYLGLAMAYLLPTILVFIAWGITCALIMRIWPSAEMPIFAVAGATWLAAGVAYFSYLSKLRRDIVRLERARSYAHIRRFPPN
Ga0306918_103184471	3300031744	Soil	MCHYLVLAMAHLLPRTILVFIAWGITCALIRRVWHSAEMPIFAVAGATWLAAGVAYFSYLSKLRRDIVRLERARGYA
Ga0307477_101454391	3300031753	Hardwood Forest Soil	MAYLLPRTILVVIAWGVTCALIRRIWPSADMPTFAIAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVR
Ga0307475_108718682	3300031754	Hardwood Forest Soil	MAYLLPRTILVVIAWGVTCALIRRIWPSADMPTFAIAGATWLAAGVAYFGYLNKLRRDIVRLERARSYTYVRRFPLN
Ga0318547_105287042	3300031781	Soil	MDYLLPRTILVVIGWCISCALIRRVWPSADIAVFALAGASWLAAGVAYFGYLHKLRRDIVRLERALGYSS
Ga0318547_107054782	3300031781	Soil	CHYRVLAMAHLLPCTILVFIAWGITCALIRRIWPSAEMPIFAVAGATWLAAGVAYFSYLSKLRRDIVRLERARGYAYIRRFPPD
Ga0318552_105887731	3300031782	Soil	MCHYLVLAMAHLLPRTILVFIAWGITCALIRRIWPSAEMPIFAVAGATWLAAGVAYFSYLSKLRRDIVRLERARGYAYIRRFPPD
Ga0306925_115798542	3300031890	Soil	MCHYLGLAMAYLLPRTILVFIAWGITCALIMRIWPSAEMPIFAVAGATWLAAGVAYFSYLSKLRRDIVRLERARSYAHIRRFPPN
Ga0306923_102892882	3300031910	Soil	MCHYLGLAMAYLLPRTILVFIAWGITCALIRRIWPSAEMPIFAVAGATWLAAGVAYFSYLSKLRRDIVRLERARGYAYIRRFPPD
Ga0306923_121041711	3300031910	Soil	AWVATCAVIRRVWPSAEMPIFAVVGAICFAAGTAYFGYLHKLRRDIAQLERARFYTGIRRLPRD
Ga0306921_103506461	3300031912	Soil	CHDLVLAMAHLLPRTILVFIAWGITRALIRRIWPSAEMPIFAVAGATWLAAGVAYFSYLSKLRRDIVRLERARGYAYIRRFPPD
Ga0310916_104952591	3300031942	Soil	IFIMCHYLGLAMAHLLPRTILVFIAWGITCALIRGIWPSAEMPIFAVAGATWLAAGVAYFSYLSKLRRDIVRLERARGYAYIRRFPPD
Ga0310909_111394542	3300031947	Soil	MCHYLVLAMAHLLPRTILVFIAWGITCALIRRIWPSAEMPIFAVAGATWLAAGVAYFSYLSKLRRDIVRL
Ga0306926_102926533	3300031954	Soil	MCHYLVLAMAHLLPRTILVFIITCALIRRIWPSAEMPIFAVAGATWLAAGVAYFSYLSKLRRDIVRLERARGYAYIRRFPPD
Ga0307479_108955221	3300031962	Hardwood Forest Soil	MAYLLPRTILVVIAWAVTCALIRRIWPSAEMPAFAVAGATWLAGGVAYFAYSNKLRRDIAQLERARSYTYVRRFPLRQSDGDD
Ga0310911_101657911	3300032035	Soil	MCHYLVLAMAHLLPRTILVFIAWGITCALIKRIWPSAEMPIFAVAGATWLAAGVAYFSYLSKLRRDIVRLERARGYAYIRRFPPD
Ga0318532_103235821	3300032051	Soil	MCHYLVLAMAHLLPRTILVFIAWGITCALIRRIWPSAEMPIFAVAVAAGVAYFSYLSKLRRDIVRLERARGYAYIRRFPPD
Ga0318533_107961952	3300032059	Soil	MCHYLGLAMAYLLPRTILVFIAWGITCALIMRIWPSAEMPIFAVAVATWLAAGVAYFSYLSKLRRDIVRLERARSYAHIRRFPPN
Ga0306924_105141541	3300032076	Soil	MAYLLPRTVLLVIAWVATCAVIRRVWPSAEMPIFAVVGATCFAAGTAYFGYLHKLRRDIAQLERARFYTGIRRLPRD
Ga0311301_100751455	3300032160	Peatlands Soil	MAYLLPRTILVVIAWGVTCALIRRIWPSAEMPAFAIAGATWLAVGVAYFGYLNKLRRDIVRLERARSYTYVRRCR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098125

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences