Metagenome Family F098093

Basic Information
Family ID	F098093
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	48 residues
Representative Sequence	LYQDVEVTPDVDFARLTDVLVVVAPPPAPDPDPGSHHTPGRGLAVIK
Number of Associated Samples	93
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.12 %
% of genes from short scaffolds (< 2000 bps)	88.46 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Most Common Taxonomy
Group	Unclassified (63.462 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (11.539 % of family members)
Environment Ontology (ENVO)	Unclassified (34.615 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.192 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 8.00% β-sheet: 0.00% Coil/Unstructured: 92.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF04093	MreD	78.85
PF03717	PBP_dimer	13.46
PF01098	FTSW_RODA_SPOVE	1.92
PF03972	MmgE_PrpD	0.96
PF02472	ExbD	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2891	Cell shape-determining protein MreD	Cell wall/membrane/envelope biogenesis [M]	78.85
COG0768	Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2)	Cell cycle control, cell division, chromosome partitioning [D]	13.46
COG0772	Peptodoglycan polymerase FtsW/RodA/SpoVE	Cell cycle control, cell division, chromosome partitioning [D]	1.92
COG0848	Biopolymer transport protein ExbD	Intracellular trafficking, secretion, and vesicular transport [U]	0.96
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.46 %
All Organisms	root	All Organisms	36.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.46 %
cellular organisms	root	All Organisms → cellular organisms	36.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.46 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	36.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	31.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.46 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	25.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.46 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	25.00 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.96 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.46 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	13.46 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.92 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.96 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.46 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.92 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	1.92 %
unclassified Myxococcales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales	0.96 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	0.96 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	0.96 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.46 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	1.92 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.92 %
Kofleriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae	0.96 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	0.96 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	0.96 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.46 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.92 %
Haliangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium	0.96 %
Sorangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium	0.96 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	0.96 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	0.96 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.46 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.92 %
Haliangium ochraceum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	0.96 %
Sorangium cellulosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	0.96 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	0.96 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	0.96 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002128\|JGI24036J26619_10133631	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300004114\|Ga0062593_100016068	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3759	Open in IMG/M
3300004153\|Ga0063455_100257274	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	920	Open in IMG/M
3300004156\|Ga0062589_100081524	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1976	Open in IMG/M
3300004156\|Ga0062589_100987443	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	785	Open in IMG/M
3300004157\|Ga0062590_102729250	Not Available	527	Open in IMG/M
3300004479\|Ga0062595_100431460	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	959	Open in IMG/M
3300004643\|Ga0062591_100238061	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1376	Open in IMG/M
3300005328\|Ga0070676_11283792	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	559	Open in IMG/M
3300005329\|Ga0070683_102354831	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	511	Open in IMG/M
3300005338\|Ga0068868_100718645	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	895	Open in IMG/M
3300005338\|Ga0068868_102146447	Not Available	532	Open in IMG/M
3300005356\|Ga0070674_102038396	Not Available	523	Open in IMG/M
3300005365\|Ga0070688_100520610	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	900	Open in IMG/M
3300005367\|Ga0070667_100518425	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1094	Open in IMG/M
3300005450\|Ga0066682_10645413	Not Available	658	Open in IMG/M
3300005546\|Ga0070696_101987498	Not Available	505	Open in IMG/M
3300005615\|Ga0070702_101327011	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	585	Open in IMG/M
3300005841\|Ga0068863_101156527	Not Available	779	Open in IMG/M
3300005843\|Ga0068860_101368114	Not Available	729	Open in IMG/M
3300005944\|Ga0066788_10028977	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	1255	Open in IMG/M
3300005993\|Ga0080027_10439398	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300006163\|Ga0070715_10890199	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	547	Open in IMG/M
3300006176\|Ga0070765_100505336	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1136	Open in IMG/M
3300009093\|Ga0105240_10766582	Not Available	1048	Open in IMG/M
3300009156\|Ga0111538_13771802	Not Available	525	Open in IMG/M
3300009610\|Ga0105340_1558181	Not Available	511	Open in IMG/M
3300010358\|Ga0126370_12314677	Not Available	532	Open in IMG/M
3300010400\|Ga0134122_11066914	Not Available	797	Open in IMG/M
3300010400\|Ga0134122_12753427	Not Available	544	Open in IMG/M
3300010401\|Ga0134121_11444245	Not Available	700	Open in IMG/M
3300011403\|Ga0137313_1057808	Not Available	682	Open in IMG/M
3300011412\|Ga0137424_1116796	Not Available	555	Open in IMG/M
3300011443\|Ga0137457_1245571	Not Available	612	Open in IMG/M
3300012882\|Ga0157304_1060986	Not Available	605	Open in IMG/M
3300012898\|Ga0157293_10307812	Not Available	526	Open in IMG/M
3300012910\|Ga0157308_10133571	Not Available	773	Open in IMG/M
3300012944\|Ga0137410_11553704	Not Available	579	Open in IMG/M
3300012961\|Ga0164302_11932313	Not Available	503	Open in IMG/M
3300013296\|Ga0157374_10511569	Not Available	1206	Open in IMG/M
3300013296\|Ga0157374_12556544	Not Available	538	Open in IMG/M
3300014969\|Ga0157376_13125007	Not Available	501	Open in IMG/M
3300015200\|Ga0173480_10800049	Not Available	602	Open in IMG/M
3300015373\|Ga0132257_100195173	All Organisms → cellular organisms → Bacteria → Proteobacteria	2396	Open in IMG/M
3300015374\|Ga0132255_100987411	All Organisms → cellular organisms → Bacteria → Proteobacteria	1262	Open in IMG/M
3300016371\|Ga0182034_11560718	Not Available	579	Open in IMG/M
3300019362\|Ga0173479_10754687	Not Available	532	Open in IMG/M
3300020005\|Ga0193697_1025602	All Organisms → cellular organisms → Bacteria → Proteobacteria	1471	Open in IMG/M
3300021082\|Ga0210380_10452238	Not Available	588	Open in IMG/M
3300021181\|Ga0210388_10038049	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3983	Open in IMG/M
3300022756\|Ga0222622_11332017	Not Available	528	Open in IMG/M
3300025703\|Ga0208357_1103506	Not Available	842	Open in IMG/M
3300025903\|Ga0207680_10628625	Not Available	768	Open in IMG/M
3300025905\|Ga0207685_10406085	Not Available	699	Open in IMG/M
3300025913\|Ga0207695_11745428	Not Available	503	Open in IMG/M
3300025918\|Ga0207662_10122682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	1631	Open in IMG/M
3300025919\|Ga0207657_10738061	Not Available	763	Open in IMG/M
3300025930\|Ga0207701_10410986	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1165	Open in IMG/M
3300025936\|Ga0207670_10076056	All Organisms → cellular organisms → Bacteria → Proteobacteria	2335	Open in IMG/M
3300025936\|Ga0207670_10127865	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1857	Open in IMG/M
3300025936\|Ga0207670_10884646	Not Available	747	Open in IMG/M
3300025940\|Ga0207691_11089217	Not Available	665	Open in IMG/M
3300025942\|Ga0207689_10826587	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300025986\|Ga0207658_10474023	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300026023\|Ga0207677_11150901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	709	Open in IMG/M
3300026041\|Ga0207639_10648484	Not Available	977	Open in IMG/M
3300026075\|Ga0207708_10584712	Not Available	944	Open in IMG/M
3300026088\|Ga0207641_10895098	Not Available	881	Open in IMG/M
3300026088\|Ga0207641_11656151	Not Available	642	Open in IMG/M
3300026088\|Ga0207641_11885532	Not Available	599	Open in IMG/M
3300026088\|Ga0207641_11965285	Not Available	586	Open in IMG/M
3300026095\|Ga0207676_10833835	Not Available	901	Open in IMG/M
3300026116\|Ga0207674_11880461	Not Available	565	Open in IMG/M
3300026118\|Ga0207675_100638654	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1070	Open in IMG/M
3300026142\|Ga0207698_10663796	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300026142\|Ga0207698_12688296	Not Available	506	Open in IMG/M
3300026215\|Ga0209849_1077230	Not Available	587	Open in IMG/M
3300028293\|Ga0247662_1045372	Not Available	761	Open in IMG/M
3300028379\|Ga0268266_11491212	Not Available	652	Open in IMG/M
3300028573\|Ga0265334_10111214	Not Available	984	Open in IMG/M
3300031239\|Ga0265328_10406589	Not Available	534	Open in IMG/M
3300031249\|Ga0265339_10376610	Not Available	666	Open in IMG/M
3300031344\|Ga0265316_10085918	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2406	Open in IMG/M
3300031521\|Ga0311364_11270748	Not Available	730	Open in IMG/M
3300031538\|Ga0310888_10076144	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1648	Open in IMG/M
3300031561\|Ga0318528_10229270	Not Available	995	Open in IMG/M
3300031561\|Ga0318528_10455371	Not Available	687	Open in IMG/M
3300031640\|Ga0318555_10031607	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2581	Open in IMG/M
3300031711\|Ga0265314_10019478	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	5259	Open in IMG/M
3300031726\|Ga0302321_100055923	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3821	Open in IMG/M
3300031751\|Ga0318494_10143471	All Organisms → cellular organisms → Bacteria → Proteobacteria	1341	Open in IMG/M
3300031794\|Ga0318503_10011310	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2357	Open in IMG/M
3300031819\|Ga0318568_10239585	Not Available	1122	Open in IMG/M
3300031835\|Ga0318517_10406141	Not Available	615	Open in IMG/M
3300031860\|Ga0318495_10356983	Not Available	647	Open in IMG/M
3300031939\|Ga0308174_10783808	Not Available	800	Open in IMG/M
3300031943\|Ga0310885_10384715	Not Available	744	Open in IMG/M
3300031959\|Ga0318530_10306645	Not Available	656	Open in IMG/M
3300032002\|Ga0307416_102218831	Not Available	650	Open in IMG/M
3300032094\|Ga0318540_10442882	Not Available	628	Open in IMG/M
3300032261\|Ga0306920_100829146	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1356	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.46%
Host-Associated	Host-Associated	36.54%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.73%
Plants	Host-Associated → Plants	36.54%
Aquatic	Environmental → Aquatic	6.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.23%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.31%
Sediment	Environmental → Aquatic → Sediment	4.81%
Peat	Environmental → Terrestrial → Peat	2.88%
Freshwater	Environmental → Aquatic → Freshwater	0.96%
Marine	Environmental → Aquatic → Marine	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.38%
Loam	Environmental → Terrestrial → Soil → Loam	13.46%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.96%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.88%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.88%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.88%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.96%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.96%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	4.81%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.88%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.92%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.96%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.96%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.96%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.96%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011403	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT166_2	Environmental	Open in IMG/M
3300011412	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025703	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F52-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026215	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)	Environmental	Open in IMG/M
3300028293	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK03	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300031239	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG	Host-Associated	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1082355611	3300001213	Wetland	DVDFARLSEVLVVVAPAPPPDPEAAVKKPLAPAHGLSVYR*
JGI24036J26619_101336311	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	EVTPDVDFARLTDVLVVVAPPPTPDPEPGSHHAPGRGLTVIK*
C688J35102_1178561042	3300002568	Soil	DVDFARLSEVLVVVAPPPSADPEAGPRKALAPARGLAVYR*
Ga0062593_1000160684	3300004114	Soil	PGAVGLYQDVEVTPDVDFARLTDVLVVVAPPPTPDPEPGSHHTPGRGLAVMK*
Ga0063455_1002572741	3300004153	Soil	GLYQDVEVTPDVDFARLSEVLVVVAPPPAPDTDPAARRLPARGPMVYR*
Ga0062589_1000815241	3300004156	Soil	GAVGLYQDVEVTPDVDFARLTDVLVVVAPPPTPDPEPGSHHTPGRGLAVMK*
Ga0062589_1009874432	3300004156	Soil	QDVEVTPDVDFARLTDVLVVVAPPPAPDPDPASHHTPGRGLAVIK*
Ga0062590_1027292501	3300004157	Soil	YQDVEVTPDVDFARLTDVLVVVAPPPAPDPDPGSHHTPGRGLAVIK*
Ga0062595_1004314603	3300004479	Soil	IIPGAVGLYQDVEVTPDVDFARLTDVLVVVAPPPAPDPDPGSHHTPGRGLAVIK*
Ga0062591_1002380611	3300004643	Soil	YQDVEVTPDVDFARLTDVLVVVAPPPTPDPEPGSHHTPGRGLAVMK*
Ga0070676_112837921	3300005328	Miscanthus Rhizosphere	PGAVGLYQDVEVTPDVDFARLTDVLVVVAPPPAPDPDPGSHHTPGRGLTVFK*
Ga0070683_1023548311	3300005329	Corn Rhizosphere	VEVTPDVDFARLSEVLVVVAPPPAADPEAGSRRTAPPARGLSVYR*
Ga0068868_1007186451	3300005338	Miscanthus Rhizosphere	YQDVEVTPDVDFARLSDVLVVVAPPPTPDPEPGSHHLPARGLSVIK*
Ga0068868_1021464471	3300005338	Miscanthus Rhizosphere	GAVGLYQDVEVTPDVDFARLTDVLVVVAPPPTPDPEPGSHHAPGRGLTVIK*
Ga0070674_1020383961	3300005356	Miscanthus Rhizosphere	VTPDVDFARLTDVLVVVAPPPAPDPDPGSHHTPGRGMAVIK*
Ga0070688_1005206101	3300005365	Switchgrass Rhizosphere	QDVEVTPDVDFARLTDVLVVVAPPPAPDPEPASHHTPGRGLTVFK*
Ga0070667_1005184253	3300005367	Switchgrass Rhizosphere	IIPGAVGLYQDVEVTPDVDFARLTDVLVIVAPPPAPDPEPSSHHTPGRGLTVIK*
Ga0066682_106454132	3300005450	Soil	PGAVGLYQDVEVTPDVDFARLTDVLVVVAPPPAADPDPGSHHAPGRGLAVIK*
Ga0070696_1019874981	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	FPRNMAVGHITRVIPGAVGLYQDVEVTPDVDFARLTDVLVVVAPPPTPDPEPGSHHTPGRGLAVMK*
Ga0070702_1013270112	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	IPDVDFARLSEVLVVVAPPPAPDPEAGGRKTLAPARGLAVYR*
Ga0068863_1011565271	3300005841	Switchgrass Rhizosphere	DVDFARLTDVLVVVAPPPAADPDPGSHHTPGRGLAVIK*
Ga0068860_1013681142	3300005843	Switchgrass Rhizosphere	SEVLVVVAPPPSADPDAGTRRSFQPTPARGLSVYR*
Ga0066788_100289773	3300005944	Soil	FARLSEVLVVAAPPPAPDPDAGLHRSSATPARGPMIYK*
Ga0080027_104393982	3300005993	Prmafrost Soil	RDLSVGHVTAVLPGAVGLRQEVEVTPDVDFARLSEVLVVAAPPPAADPDAGTHRSSAPARGPMVYR*
Ga0070715_108901992	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	QEVEVTPDVDFARLSEVLVVVAPPPAPDPESGTRRASSGLPSRGLSVYR*
Ga0070765_1005053361	3300006176	Soil	LYQDVEVTPDVDFARLSEVLVVVAPPPAPDTDPAARRLPARGPMVYR*
Ga0105240_107665823	3300009093	Corn Rhizosphere	VGLYQDVEVTPDVDFARLSEVLVVVAPPPAPDTDPAARRLPARGPMVYR*
Ga0111538_137718022	3300009156	Populus Rhizosphere	VTPDVDFARLADVLVVVAPPPTPDPDPSSHHAPARGLTLIK*
Ga0105340_15581812	3300009610	Soil	IVPGAVGLYQDVEVTPDVDFARLTDVLVVVAPPPAPDPEPGSHHTPGRGLTVFK*
Ga0126370_123146772	3300010358	Tropical Forest Soil	VGLYQDVEVTPDVDFARLTDVLVVVAPPPAPDPDPGSHHTPGRGLAVIK*
Ga0134122_110669141	3300010400	Terrestrial Soil	LYQDVEVTPDVDFARLTDVLVVVAPPPAPDPDPGSHHTPGRGLAVIK*
Ga0134122_127534271	3300010400	Terrestrial Soil	IIPGAVGLYQDVEVTPDVDFARLSDVLVVVAAPPAPDPDPSSHHLPARGLSVIK*
Ga0134121_114442452	3300010401	Terrestrial Soil	GHVTRIIPGAVGLYQDVEVTPDVDFARLTDVLVVVAPPPAPDPEPGAHHAPGRGLAVIK*
Ga0137313_10578082	3300011403	Soil	EVTPDVDFARLTDVLVVVAPPPAPDPDPGSHHAPGRGLTVFK*
Ga0137424_11167962	3300011412	Soil	PDVDFARLTDVLVVVAPPPAPDPDPGSHHTPGRGLTVFK*
Ga0137457_12455712	3300011443	Soil	GLYQDVEVTPDVDFARLTDVLVVVAPPPAPDPDPGSHHAPGRGLTVFK*
Ga0157304_10609862	3300012882	Soil	NLAVGHVTRIIPGAVGLYQDVEVTPDVDFARLTDVLVIVAPPPAPDPEPSSHHAPGRGLTVIK*
Ga0157293_103078121	3300012898	Soil	QEVEVTPDVDFARLADVLVVVAPPPTPDPDPSSHHAPARGLTLIK*
Ga0157308_101335712	3300012910	Soil	IPGAVGLYQDVEVTPDVDFARLTDVLVVVAPPPTPDPEPGSHHTPGRGLAVMK*
Ga0137410_115537042	3300012944	Vadose Zone Soil	AVGLFQEVEVTPDVDFARLSEVLGVAAPPPAADPDAGTHRSGAPARGPMVYK*
Ga0164302_119323132	3300012961	Soil	VDFARLQDVLVVVAPPPAPDPDPASHHTPGRGVAVFK*
Ga0157374_105115693	3300013296	Miscanthus Rhizosphere	ITRVIPGAVGRYQDVEVTPDVDFARLSEVLVVVAPPPAPDTDPAARRLPARGPMVYR*
Ga0157374_125565442	3300013296	Miscanthus Rhizosphere	PGAVGLYQDVEVTPDVDVARLTDVRVVVAPPPAPDPDPGSHHTPGRGLAVIK*
Ga0157376_131250072	3300014969	Miscanthus Rhizosphere	PDVDFARLTDVLVIVAPPPAPDPEPSSHHTPGRGLTVIK*
Ga0173480_108000492	3300015200	Soil	MAVGHVTRIIPGAVGLYQDVEVTPDVDFARLTDVLVVVAPPPAPDPDPGSHHTPGRGLTVFK*
Ga0132257_1001951731	3300015373	Arabidopsis Rhizosphere	IIPGAVGLYQDVEVTPDVDFARLTDVLVVVAPPPAPDPDPAAHHTPGRGLAIIK*
Ga0132255_1009874111	3300015374	Arabidopsis Rhizosphere	RNLAVGHVTRIIPGAVGLYQDVEVTPDVDFARLTDVLVVVAPPPTPDPEPGSHHAPGRGLTVIK*
Ga0182034_115607182	3300016371	Soil	VTKVIPGAVGLYQDVEVTPDVDFGRLADVLVVVAPPPAPDPEAGSHHQPARGLMVYR
Ga0173479_107546872	3300019362	Soil	GAVGLYQDVEVTPDVDFARLTDVLVVVAPPPTPDPEPGSHHTPGRGLAVMK
Ga0193697_10256021	3300020005	Soil	QDVEVTPDVDFARLADVLIVVAPPPTPDPDPASHHTPARGLTVYK
Ga0210380_104522381	3300021082	Groundwater Sediment	VEVTPDVDFARLQDVLVIVAPPPAPDPDPASHHTPGRGVAVFK
Ga0210388_100380491	3300021181	Soil	DVDFARLSEVLVVVAPPPAPDADPAARRLPARGPMVYR
Ga0222622_113320171	3300022756	Groundwater Sediment	PDVDFARLQDVLVVVAPPPVADPDPASHHTPGRGVAVIK
Ga0208357_11035061	3300025703	Arctic Peat Soil	VTPDVDFSRLSEVLVVVAPPPAPDPDPSAHHLPARGLMVYK
Ga0207680_106286251	3300025903	Switchgrass Rhizosphere	FARLTDVLVVVAPPPTPDPEPGSHHAPGRGLTVIK
Ga0207685_104060852	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	RVIPGAVGLYQDVEVTPDVDFARLSEVLVVVAPPPAADTDPAARRLPARGPMVYR
Ga0207695_117454281	3300025913	Corn Rhizosphere	GHITAVLPGAVGLFQDVEVTPDVDFARLSEVLVVAAPPPAPDPDAGAHRSSATPARGPMVYK
Ga0207662_101226821	3300025918	Switchgrass Rhizosphere	VTPDVDFARLSEVLVVVAPPPSADPDAGTRRSFQPTPARGLSVYR
Ga0207657_107380611	3300025919	Corn Rhizosphere	VGLYQDVEVTPDVDFARLTDVLVVVAPPPTPDPEPGSHHAPGRGLTVIK
Ga0207701_104109861	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	PGAVGLYQDVEVTPDVDFARLQDVLVIVAPPPAADPDPASHHRPARGLTVIK
Ga0207670_100760563	3300025936	Switchgrass Rhizosphere	VEVTPDVDFARLTDVLVVVAPPPTPDPEPGSHHAPGRGLTVIK
Ga0207670_101278653	3300025936	Switchgrass Rhizosphere	IPGAVGLYQDVEVTPDVDFARLTDVLVVVAPPPTPDPEPGSHHTPGRGLAVMK
Ga0207670_108846462	3300025936	Switchgrass Rhizosphere	VDFARLTDVLVVVAPPPTPDPEPGSHHAPGRGLTVIK
Ga0207691_110892171	3300025940	Miscanthus Rhizosphere	EVTPDVDFARLTDVLVVVAPPPAPDPDPGSHHTPGRGMAVIK
Ga0207689_108265872	3300025942	Miscanthus Rhizosphere	VEVTPDVDFARLSEVLVVVAPPPAADPEAGSRRTAPPARGLSVYR
Ga0207658_104740231	3300025986	Switchgrass Rhizosphere	AVGLYQDVEVTPDVDFARLTDVLVIVAPPPAPDPEPSSHHTPGRGLTVIK
Ga0207677_111509011	3300026023	Miscanthus Rhizosphere	GKVTKIIPGAVGLYQDVEVTPDVDFARLSDVLVVVAAPPAPDPDPSSHHLPARGLSVIK
Ga0207639_106484841	3300026041	Corn Rhizosphere	LAIGHITHIFPGAVGLYQDVEVTPDVDFARLADVLVIVAPPPAADPDPGSHHLPARGLTVYR
Ga0207708_105847123	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	PGAVGLYQDVEVTPDVDFGRLSDVLVVVAPPPAADPEPSGHRQPARGLSVYK
Ga0207641_108950983	3300026088	Switchgrass Rhizosphere	GLYQDVEVTPDVDFARLTDVLVIVAPPPAPDPEPSSHHTPGRGLTVIK
Ga0207641_116561512	3300026088	Switchgrass Rhizosphere	VEVTPDVDFARLTDVLVVVAPPPAPDPDPASHHTPARGLTVFK
Ga0207641_118855321	3300026088	Switchgrass Rhizosphere	PGAVGLYQDVEVTPDVDFARLTDVLVVVAPPPAADPDPGSHHTPGRGLAVIK
Ga0207641_119652852	3300026088	Switchgrass Rhizosphere	DVDFARLTDVLVVVAPPPAPDPDPGSHHTPGRGLAVIK
Ga0207676_108338351	3300026095	Switchgrass Rhizosphere	NLAVGHIARIIPGAVGLYQDVEVTPDVDFARLTDVLVVVAPPPAPDPDPGSHHTPGRGMAVIK
Ga0207674_118804611	3300026116	Corn Rhizosphere	VTRIIPGAVGLYQDVEVTPDVDFARLTDVLVVVAPPPAPDPDPGSHHTPGRGLTVFK
Ga0207675_1006386541	3300026118	Switchgrass Rhizosphere	GAVGLYQDVEVAPDVDFARLTDVLVVVAPPPVPDPDPGSHHTPGRGLTVFK
Ga0207698_106637961	3300026142	Corn Rhizosphere	DVDFARLTDVLVIVAPPPAPDPEPASHHAPGRGLTVIK
Ga0207698_126882962	3300026142	Corn Rhizosphere	AVGHITRVIPGAVGLYQDVEVTPDVDFARLTDVLVVVAPPPTPDPEPGSHHAPGRGLTVI
Ga0209849_10772301	3300026215	Soil	GAVGLYQDVEVTPDVDFGRLSEVLVVVAPPPAPDPDPGAHHLPARGLMVYK
Ga0247662_10453722	3300028293	Soil	VEVTPDVDFARLTDVLVVVAPPPAADPEPASHHTPGRGLTVIK
Ga0268266_114912122	3300028379	Switchgrass Rhizosphere	DFARLTDVLVIVAPPPAPDPDPGSHHTPGRGMAVIK
Ga0265334_101112143	3300028573	Rhizosphere	DVDFARLSEVLVVVAPPPAPDTDPAARRLPARGPMVYR
Ga0265328_104065892	3300031239	Rhizosphere	EVTPDVDFARLSEVLVVVAPPPSADPEPGPRRSSLPTRGLSVYR
Ga0265339_103766101	3300031249	Rhizosphere	EVTPDVDFARLSEVLVVVAPPPAPDTDPAARRLPARGPMVYR
Ga0265316_100859181	3300031344	Rhizosphere	TAVLPGAVGLFQDVEVTPDVDFARLSEVLVVAAPPPAADPDAGSKRAGAVPARGPMVYK
Ga0311364_112707482	3300031521	Fen	PDVDFARLSEVLVVVAPPPAPDTDPAARRLPARGPMVYR
Ga0310888_100761443	3300031538	Soil	LYQDVEVTPDVDFARLTDVLVVVAPPPTPDPEPGSHHAPGRGLTVIK
Ga0318528_102292701	3300031561	Soil	PGAVGLYQDVEVTPDVDFGRLADVLVVVAPPPAPDPEAGSHHQPARGLMVYR
Ga0318528_104553711	3300031561	Soil	VGLYQDVEVTPDVDFARLSEVLVVVAPPPAPDTDPAARRLPARGPMVYR
Ga0318555_100316073	3300031640	Soil	IPGAVGLYQDVEVTPDVDFGRLADVLVVVAPPPAPDPEAGSHHQPARGLMVYR
Ga0265314_100194786	3300031711	Rhizosphere	DVDFARLSEVLVVVAPPPSADPDAGSRRASPPGRGLSVYR
Ga0302321_1000559231	3300031726	Fen	FARLSEVLVVVAPAPPADPEASAHKSLVPSHGLGVYR
Ga0318494_101434713	3300031751	Soil	DVDFGRLADVLVVVAPPPAPDPEAGSHHQPARGLMVYR
Ga0318503_100113103	3300031794	Soil	VDFGRLADVLVVVAPPPAPDPEAGSHHQPARGLMVYR
Ga0318568_102395853	3300031819	Soil	LAVGHVTKVIPGAVGLYQDVEVTPDVDFGRLADVLVVVAPPPAPDPEAGSHHQPARGLMVYR
Ga0318517_104061412	3300031835	Soil	TKVIPGAVGLYQDVEVTPDVDFARLTDVLVVVAPPPAPDPDPGAHHLPAHGLSVYR
Ga0318495_103569832	3300031860	Soil	TKVIPGAVGLYQDVEVTPDVDFGRLADVLVVVAPPPAPDPEAGSHHQPARGLMVYR
Ga0302322_1018939241	3300031902	Fen	DFARLSEVLIVVAPAPPVDPDAGSKKPLVPAHGLAVYR
Ga0308174_107838081	3300031939	Soil	TPDVDFARLSEVLVVVAPPPAPDTDPAARRLPARGPMVYR
Ga0310885_103847152	3300031943	Soil	ITRVIPGAVGLYQDVEVTPDVDFARLTDVLVVVAPPPTPDPEPGSHHAPGRGLTVIK
Ga0318530_103066452	3300031959	Soil	KVIPGAVGLYQDVEVTPDVDFGRLADVLVVVAPPPAPDPEAGSHHQPARGLMVYR
Ga0307416_1022188311	3300032002	Rhizosphere	VTPDVDFARLSDVLVVVAPPPAQDPDPGGHRQPSRGMSVYK
Ga0318540_104428821	3300032094	Soil	GDDGVPFSRNLAVGHVTKVIPGAVGLYQDVEVTPDVDFGRLADVLVVVAPPPAPDPEAGSHHQPARGLMVYR
Ga0306920_1008291463	3300032261	Soil	LYQDVEVTPDVDFARLADVLVVVAPPPAPDPEAGSHHQPARGLMVYR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F098093

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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