Metagenome / Metatranscriptome Family F098007

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098007
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	126 residues
Representative Sequence	MKTKALILTGVLLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG
Number of Associated Samples	93
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	57.69 %
% of genes near scaffold ends (potentially truncated)	42.31 %
% of genes from short scaffolds (< 2000 bps)	81.73 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.154 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere (9.615 % of family members)
Environment Ontology (ENVO)	Unclassified (51.923 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (79.808 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 2.50% β-sheet: 36.67% Coil/Unstructured: 60.83%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF03364	Polyketide_cyc	19.23
PF08085	Entericidin	13.46
PF13488	Gly-zipper_Omp	3.85
PF06347	SH3_4	1.92
PF01738	DLH	1.92
PF03916	NrfD	0.96
PF07746	LigA	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG5510	Predicted small secreted protein	Function unknown [S]	13.46

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.15 %
Unclassified	root	N/A	3.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.15 %
Unclassified	root	N/A	3.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.15 %
Unclassified	root	N/A	3.85 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	69.23 %
Unclassified	root	N/A	3.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.96 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	57.69 %
Unclassified	root	N/A	3.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	57.69 %
Unclassified	root	N/A	3.85 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	57.69 %
Unclassified	root	N/A	3.85 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.96 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.96 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	57.69 %
Unclassified	root	N/A	3.85 %
Asticcacaulis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Asticcacaulis	0.96 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	57.69 %
Unclassified	root	N/A	3.85 %
Asticcacaulis benevestitus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Asticcacaulis → Asticcacaulis benevestitus	0.96 %
Salinispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora	0.96 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	57.69 %
Unclassified	root	N/A	3.85 %
Salinispora pacifica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	0.96 %
Asticcacaulis benevestitus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Asticcacaulis → Asticcacaulis benevestitus	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_101827233	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300004480\|Ga0062592_101072680	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	743	Open in IMG/M
3300004480\|Ga0062592_101543595	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	639	Open in IMG/M
3300005293\|Ga0065715_10056652	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	946	Open in IMG/M
3300005330\|Ga0070690_100312070	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1131	Open in IMG/M
3300005331\|Ga0070670_100575272	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1006	Open in IMG/M
3300005332\|Ga0066388_100547250	All Organisms → cellular organisms → Bacteria	1787	Open in IMG/M
3300005333\|Ga0070677_10659797	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	585	Open in IMG/M
3300005334\|Ga0068869_101126821	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	687	Open in IMG/M
3300005341\|Ga0070691_10483682	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	713	Open in IMG/M
3300005345\|Ga0070692_10441798	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300005347\|Ga0070668_100821439	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	827	Open in IMG/M
3300005353\|Ga0070669_101099541	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	684	Open in IMG/M
3300005355\|Ga0070671_100700535	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	878	Open in IMG/M
3300005366\|Ga0070659_101902685	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	533	Open in IMG/M
3300005439\|Ga0070711_101306528	Not Available	629	Open in IMG/M
3300005440\|Ga0070705_101331473	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	596	Open in IMG/M
3300005444\|Ga0070694_100269788	All Organisms → cellular organisms → Bacteria → Proteobacteria	1294	Open in IMG/M
3300005457\|Ga0070662_101043806	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	700	Open in IMG/M
3300005535\|Ga0070684_102360698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	501	Open in IMG/M
3300005539\|Ga0068853_101845879	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	586	Open in IMG/M
3300005545\|Ga0070695_100054192	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2580	Open in IMG/M
3300005563\|Ga0068855_100112861	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3118	Open in IMG/M
3300005719\|Ga0068861_100342411	All Organisms → cellular organisms → Bacteria → Proteobacteria	1309	Open in IMG/M
3300006169\|Ga0082029_1290308	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300006804\|Ga0079221_10729004	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	696	Open in IMG/M
3300006845\|Ga0075421_102568805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Asticcacaulis → Asticcacaulis benevestitus	529	Open in IMG/M
3300006846\|Ga0075430_101776847	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300006881\|Ga0068865_100397050	All Organisms → cellular organisms → Bacteria → Proteobacteria	1129	Open in IMG/M
3300006903\|Ga0075426_10947696	All Organisms → cellular organisms → Bacteria → Proteobacteria	650	Open in IMG/M
3300006904\|Ga0075424_100660845	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300009092\|Ga0105250_10421915	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	595	Open in IMG/M
3300009093\|Ga0105240_10685640	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1120	Open in IMG/M
3300009094\|Ga0111539_10154968	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2681	Open in IMG/M
3300009098\|Ga0105245_10084446	All Organisms → cellular organisms → Bacteria → Proteobacteria	2909	Open in IMG/M
3300009147\|Ga0114129_10194639	All Organisms → cellular organisms → Bacteria	2750	Open in IMG/M
3300009148\|Ga0105243_11923789	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	625	Open in IMG/M
3300009156\|Ga0111538_11410124	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	879	Open in IMG/M
3300009156\|Ga0111538_13651064	Not Available	533	Open in IMG/M
3300009162\|Ga0075423_10779496	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1011	Open in IMG/M
3300009176\|Ga0105242_10147366	All Organisms → cellular organisms → Bacteria	2049	Open in IMG/M
3300009553\|Ga0105249_10058687	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3527	Open in IMG/M
3300010145\|Ga0126321_1366888	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300010145\|Ga0126321_1419898	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	860	Open in IMG/M
3300010371\|Ga0134125_10202133	All Organisms → cellular organisms → Bacteria → Proteobacteria	2211	Open in IMG/M
3300010373\|Ga0134128_10246460	All Organisms → cellular organisms → Bacteria → Proteobacteria	2005	Open in IMG/M
3300010375\|Ga0105239_10471646	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1425	Open in IMG/M
3300010397\|Ga0134124_10119394	All Organisms → cellular organisms → Bacteria → Proteobacteria	2319	Open in IMG/M
3300010401\|Ga0134121_10399995	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1241	Open in IMG/M
3300012212\|Ga0150985_104521908	Not Available	648	Open in IMG/M
3300012901\|Ga0157288_10022291	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300012911\|Ga0157301_10021800	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
3300012915\|Ga0157302_10250067	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	663	Open in IMG/M
3300013100\|Ga0157373_10113959	All Organisms → cellular organisms → Bacteria	1900	Open in IMG/M
3300013102\|Ga0157371_10786206	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	716	Open in IMG/M
3300013104\|Ga0157370_10516941	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300013307\|Ga0157372_10290769	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1900	Open in IMG/M
3300014745\|Ga0157377_10063554	All Organisms → cellular organisms → Bacteria → Proteobacteria	2114	Open in IMG/M
3300014968\|Ga0157379_10384598	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1288	Open in IMG/M
3300015371\|Ga0132258_10560964	All Organisms → cellular organisms → Bacteria	2863	Open in IMG/M
3300015371\|Ga0132258_11230844	All Organisms → cellular organisms → Bacteria	1892	Open in IMG/M
3300015371\|Ga0132258_11421544	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1752	Open in IMG/M
3300015372\|Ga0132256_103063917	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	562	Open in IMG/M
3300015372\|Ga0132256_103292239	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	543	Open in IMG/M
3300015373\|Ga0132257_100246713	All Organisms → cellular organisms → Bacteria	2131	Open in IMG/M
3300015373\|Ga0132257_100571550	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1394	Open in IMG/M
3300015373\|Ga0132257_102497399	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	671	Open in IMG/M
3300015374\|Ga0132255_100940660	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1294	Open in IMG/M
3300015374\|Ga0132255_101820813	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	925	Open in IMG/M
3300015374\|Ga0132255_102223317	Not Available	836	Open in IMG/M
3300015374\|Ga0132255_103059905	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	714	Open in IMG/M
3300017792\|Ga0163161_11966377	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	520	Open in IMG/M
3300019356\|Ga0173481_10887093	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300019361\|Ga0173482_10234169	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	772	Open in IMG/M
3300020069\|Ga0197907_10744403	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	700	Open in IMG/M
3300020070\|Ga0206356_10767822	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300020075\|Ga0206349_1749336	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	650	Open in IMG/M
3300020077\|Ga0206351_10153439	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300020078\|Ga0206352_10082992	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300020081\|Ga0206354_10968515	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300020082\|Ga0206353_10831152	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	726	Open in IMG/M
3300020610\|Ga0154015_1074586	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300022467\|Ga0224712_10138820	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300025315\|Ga0207697_10069415	All Organisms → cellular organisms → Bacteria	1475	Open in IMG/M
3300025911\|Ga0207654_10024994	All Organisms → cellular organisms → Bacteria → Proteobacteria	3217	Open in IMG/M
3300025912\|Ga0207707_10334883	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1305	Open in IMG/M
3300025914\|Ga0207671_10992669	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	662	Open in IMG/M
3300025918\|Ga0207662_11367462	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	503	Open in IMG/M
3300025919\|Ga0207657_10025362	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5468	Open in IMG/M
3300025920\|Ga0207649_10302620	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1169	Open in IMG/M
3300025923\|Ga0207681_10093608	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2151	Open in IMG/M
3300025931\|Ga0207644_11176530	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	644	Open in IMG/M
3300025933\|Ga0207706_10005848	All Organisms → cellular organisms → Bacteria	11438	Open in IMG/M
3300025935\|Ga0207709_10608307	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	866	Open in IMG/M
3300025938\|Ga0207704_11045428	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	692	Open in IMG/M
3300025942\|Ga0207689_10448044	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1079	Open in IMG/M
3300025972\|Ga0207668_11572051	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	594	Open in IMG/M
3300025986\|Ga0207658_10976489	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	772	Open in IMG/M
3300026067\|Ga0207678_10029395	All Organisms → cellular organisms → Bacteria	4796	Open in IMG/M
3300026118\|Ga0207675_100471373	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1247	Open in IMG/M
3300031716\|Ga0310813_10875948	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	813	Open in IMG/M
3300031854\|Ga0310904_10646232	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	727	Open in IMG/M
3300032421\|Ga0310812_10068492	All Organisms → cellular organisms → Bacteria	1406	Open in IMG/M
3300033412\|Ga0310810_10092511	All Organisms → cellular organisms → Bacteria → Proteobacteria	3619	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	61.54%
Environmental	Environmental	38.46%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	61.54%
Terrestrial	Environmental → Terrestrial	36.54%
Aquatic	Environmental → Aquatic	1.92%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	40.38%
Soil	Environmental → Terrestrial → Soil	36.54%
Rhizoplane	Host-Associated → Plants → Rhizoplane	21.15%
Freshwater	Environmental → Aquatic → Freshwater	1.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	24.04%
Soil	Host-Associated → Plants → Rhizosphere → Soil	16.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	11.54%
Loam	Environmental → Terrestrial → Soil → Loam	10.58%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.62%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.92%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	24.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	16.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	11.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.62%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.88%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.96%

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	9.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	8.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	7.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.77%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.85%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.92%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.92%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020077	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020610	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1018272332	3300000956	Soil	MKTKAAVLTGVLLISGSLAVPTPGFTGGDKDHGKRAERSDRRDRDAHDLQGTWYMNGDRDKRAEINNSGRDLQAKNENGQTSRLEVDRRGNVHAPEWNVSGHVR
Ga0062592_1010726801	3300004480	Soil	VHGAAQSEIPLEAVMGSSDFKEDKMKTKALILTGVLLISGSLTVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0062592_1015435951	3300004480	Soil	MKTEAAVLTGVLLISGSLALPTTGFTRDDKDYGKRAERSDRRDRDARDLQGTWYMNGDRDKRAEINRNGGELHAKNENGQTSRLEVDRRGNVHAPEWNGATGHIRGNRIEWDNGTTWTRR
Ga0065715_100566521	3300005293	Miscanthus Rhizosphere	GLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0070690_1003120702	3300005330	Switchgrass Rhizosphere	VHGAAQSEIPLEAVMGSSDFKEDKMKTKALILTGVFLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0070670_1005752722	3300005331	Switchgrass Rhizosphere	VHGAAQSEIPLETVMGSSDFTEDKMKTKALILTGVLLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0066388_1005472502	3300005332	Tropical Forest Soil	MKTEAAILTGVLLISGSLALPTPGFARDDEHDNGKTERYDRRDYNNRDARDLKGTWYMNGDRNKRAEIDGNGRNLQARNEKGDMSRLEIDRNGNVHASDWEGLIGHLRGNSIEWDNGTTWTRR*
Ga0070677_106597972	3300005333	Miscanthus Rhizosphere	SDFKEDKMKTKALILTGVLLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0068869_1011268211	3300005334	Miscanthus Rhizosphere	MKTKALILTGVLLISGSLTVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQVKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG
Ga0070691_104836821	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MKTEAAVLTGVLLISGSLTVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG
Ga0070692_104417982	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKALILTGVLLISGSLTVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITG
Ga0070668_1008214391	3300005347	Switchgrass Rhizosphere	DKDHGKKAERSDRHDRDARDLQGTWYMNGDHNKRTEINDNGRELQVKNEDGKTSRLEVDRRGNVHALDWNGITGRLRGNRIEWDNGTTWTRG*
Ga0070669_1010995411	3300005353	Switchgrass Rhizosphere	LISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0070671_1007005351	3300005355	Switchgrass Rhizosphere	VHGAAQSEIPLEAVIESSVFKEDKMKTKALILTGVLLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0070659_1019026851	3300005366	Corn Rhizosphere	AKPVHGAAQSEIPLEAVMGSSDFKEDKMKTKALILTGVFLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0070711_1013065281	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	APLNKVSRLGTEKEDEMKTRAALVAGALLISGSLALPTPGFTRDDDHDNGRTERYDRRDYNGRDARDLQGTWYMNGDRNKRTEINGNGRNLQARNEKGDTSRLEIDRSGNVHASDWQGLTGHLRGNRIEWDNGTTWTRR*
Ga0070705_1013314731	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	EAVIESSVFKEDKMKTKALILTGVFLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0070694_1002697881	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKAAIVTGVLLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQVKNEDGKTSRLEVDRRGNVHALDWNG
Ga0070662_1010438062	3300005457	Corn Rhizosphere	VHGAAQSEIPLEAVMGSSDFKEDKMKTKALILTGVLLISGSLTVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQVKNEDGKTSRLEVDRRGNVHALDWNGITGRLRGNRIEWDNGTTWTRG*
Ga0070684_1023606981	3300005535	Corn Rhizosphere	KMKTKALILTGVLLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDRNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0068853_1018458791	3300005539	Corn Rhizosphere	AILTGVLLISGSLAVPTPGLTAGDKDHGKKAERSDRHDRDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0070695_1000541921	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGNHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0068855_1001128612	3300005563	Corn Rhizosphere	MKTKAAIVTSVLLISGSLAVPTPGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQVKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG
Ga0068861_1003424113	3300005719	Switchgrass Rhizosphere	MKTKAAIVTSVLLISGSLAVPTPGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGRLRGNRIEWDNGTTWTRG
Ga0082029_12903082	3300006169	Termite Nest	MKSKAAVLTGVLLISGSLAIPTPGLTRDDKDHGKRADRRDRNDRDARDLKGTWYMNGNRDKRAEINDKGGELQAKNENGKTSRLEVVRRGNVHAPDWRISGHVRGDRIEWDNGTTWTRG*
Ga0079221_107290041	3300006804	Agricultural Soil	ILTGVLLISGSLAVPTSGLTAGDKDHGKRAERSDRHDRDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0075421_1025688051	3300006845	Populus Rhizosphere	GDNDHGRRAERYDGHDRNDRDRRDLHGTWYMNGDRDKRAEINDRGRELEAKNENGQTSRLEVDRRGNVHAMDWNVIGHVRGNRIEWDNGTTWTRG*
Ga0075430_1017768472	3300006846	Populus Rhizosphere	MKTKATVLTGVLLISGSLAVPTPGFTGGDKDHGKRAERSDRRDRDAHDLQGTWYMNGDRDKRAEINNSGRDLQAKNENGQTSRLEVDRRGNVHAPEWNVSGH
Ga0068865_1003970502	3300006881	Miscanthus Rhizosphere	VHGAAQSEIPLEAVMGSSDFKEDKMKTKALILTGVLLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0075426_109476962	3300006903	Populus Rhizosphere	MKTKAAIVTSVLLISGSLAVPTPGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTR
Ga0075424_1006608453	3300006904	Populus Rhizosphere	MKTKATVLTGVLLISGSLAVPTPGFTGGDKDHGKRAERSDRRDRDAHDLQGTWYMNGDRDKRAEINNSGRDLQAKNENGQTSRLEVDRRGNVHAPEWNVSGHVRGNRIEWDNGTTWTRG*
Ga0105250_104219151	3300009092	Switchgrass Rhizosphere	MGSSDFKEDKMKTKALILTGVFLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDRNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0105240_106856402	3300009093	Corn Rhizosphere	VHGAAQSEIPLEAVIESSVFKEDKMKTKAAIVTGVLLISGSLAVPTPGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDQNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0111539_101549683	3300009094	Populus Rhizosphere	MGSSDFKEDKMKTKALILTGVLLISGSLTVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0105245_100844466	3300009098	Miscanthus Rhizosphere	MGSSDFKEDKMKTKALILTGVLLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0114129_101946393	3300009147	Populus Rhizosphere	MKTKAAVLTGVLLISGSLAVPTPGFTGGDKDHGKRAERSDRRDRDAHDLQGTWYMNGDRDKRAEINNSGRDLQAKNENGQTSRLEVDRRGNVHAPEWNVSGHVRGNRIEWDNGTTWTRG*
Ga0105243_119237892	3300009148	Miscanthus Rhizosphere	AKPVHGAAQSEIPLEAVIESSVFKEDKMKTKALILTGVLLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGDLRGNRIEWDNGTTWTRG*
Ga0111538_114101241	3300009156	Populus Rhizosphere	SDFKEDKMKTKALILTGVLLISGSLTVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0111538_136510642	3300009156	Populus Rhizosphere	SDFKEDKMKTKALILTGVLLISGSLTVPTSGLTAGDKDHGNRAERSDRHDKDARDLQGTWYMNGNHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0075423_107794962	3300009162	Populus Rhizosphere	MKTKAAIVTSALLISGSLAVPTPGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG
Ga0105242_101473664	3300009176	Miscanthus Rhizosphere	MGSSDFKEDKMKTKALILTGVLLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLEGTWYMNGDHNKRTEINDNGRELQVKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWT
Ga0105249_100586871	3300009553	Switchgrass Rhizosphere	GLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQVKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0126321_13668882	3300010145	Soil	MNTKAAVLTGALLISGSLVMPTPAFTRDEKSHDKRTEGSDRRDDNDRNTRDLKGTWYLNGNRHKRAEINDKGGRLQAKNEDGKISRLEVDRRGKVHAPDWNGVTGHVRGDRIEWDNGTTWTRG*
Ga0126321_14198982	3300010145	Soil	LKRLQGSTDLKEEKMKTKAAVLTGVLLISGSLAVPTPGLTAGDKDHGKRAERSDRRDRDARDLQGTWYMNGDRNKRAEINDSGRELQAKNENGQTSRLEVDRRGNVHAPDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0134125_102021331	3300010371	Terrestrial Soil	VHGAAQSEIPLEAVIESSVFKEDKMKTKALILTGVFLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0134128_102464601	3300010373	Terrestrial Soil	MGSSDFKEDKMKTKALILTGVLLISGSLTVPTSGLTAGDKDHGNRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0105239_104716462	3300010375	Corn Rhizosphere	MKTKALILTGVLLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQVKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG
Ga0134124_101193944	3300010397	Terrestrial Soil	MKTKAAIVTSVLLISGSLAVPTPGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDRNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG
Ga0134121_103999951	3300010401	Terrestrial Soil	VISKEDKMKTKAAIVTGVFLISGSLAVPTPGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0150985_1045219081	3300012212	Avena Fatua Rhizosphere	VILTASKNSSNRAGEKPVHGVTQSEILLEAITDTSELKEDKMKTKAAVLTGALLISGSLAIPTTGFTRDDKDHGKRSERSDRHDRNDRDARNLQGTWYMNGQHNKRAEVNDKAGELSAKNEDGKTSRLEVDRRGNVHAPDWNVTGHVRGNRIEWDNGTTWTRG*
Ga0157288_100222911	3300012901	Soil	VHGAAQSEIPLEAVMGSSDFKEDKMKTKALILTGVLLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQVKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0157301_100218003	3300012911	Soil	MKTKAAIVTGVLLISGSLAVPTPGLTAGDKDHGKRAERSDRHDRDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGRLRGNRIEWDNGTTWTRG
Ga0157302_102500672	3300012915	Soil	LTGVLLISGSLALPTTGFTRDDKDYGKRAERSDRRDRDARDLQGTWYMNGDRDKRAEINRNGGELHAKNENGQTSRLEVDRRGNVHAPEWNGATGHIRGNRIEWDNGTTWTRG*
Ga0157373_101139591	3300013100	Corn Rhizosphere	VHGAAQSEIPLEAVIESSVFKEDKMKTKALILTGVLLISGSLAVPTSGLTAGDKDHGKRAERSDRHDRDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0157371_107862062	3300013102	Corn Rhizosphere	PVHGAAQSEIPLEAVIESSVFKEDKMKTKALILTGVLLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0157370_105169411	3300013104	Corn Rhizosphere	METKAAIVTSVLLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDQNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG
Ga0157372_102907694	3300013307	Corn Rhizosphere	MGSSDFKEDKMKTKALILTGVLLISGSLTVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQVKNEDGKTSRLEVDRRGNVHALDWNGITGRLRGNRIEWDNGTTWTRG*
Ga0157377_100635541	3300014745	Miscanthus Rhizosphere	VHGAAQSEIPLEAVIESSVFKEDKMKTKALILTGVLLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQVKNEDGKTSRLEVDRRGNVHALDWNGITGRLRGNRIEWDNGTTWTRG*
Ga0157379_103845982	3300014968	Switchgrass Rhizosphere	MGSSDFKEDKMKTKALILTGVLLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQVKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0132258_105609647	3300015371	Arabidopsis Rhizosphere	VTGNGKFKEEKMKTKATLLSGVLLISGSLALPTPGFTRDDKDHGERAERSERHDRNDRDGRDLKGTWYMNGDRNKRAEINDNGRDLQAKNENGQTSRLEVDRRGNVHAPEWNGITGHIRGNRIEWDNGTTWTRG*
Ga0132258_112308442	3300015371	Arabidopsis Rhizosphere	MGSSDFKEDKMKTKALILTGVFLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0132258_114215442	3300015371	Arabidopsis Rhizosphere	MKTKAAVLTGVLLISGSLALPTTGFTRDDKDYGKRAERSDRRDRDARDLQGTWYMNGDRDKRAEINRNGGELHAKNENGQTSRLEVDRRGNVHAPEWNGATGHIRGNRIEWDNGTTWTRG
Ga0132256_1030639171	3300015372	Arabidopsis Rhizosphere	AQSEILLEAMTENGKFKEDKMKTKAILLTGVLLISGSLALPTPGFTRDDKDYGKRAERSDRRDRDARDLQGTWYMNGDRNKRAEINRNGGEFQGKNENGQTSRLEVDRRWNVHAPEWNGVTGHIRGNRIEWDNGTTWTRG*
Ga0132256_1032922392	3300015372	Arabidopsis Rhizosphere	VTGNGKFKEDKMKTKATLLSGVLLISGSLALPTPGFTRDDKDHGERAERSERHDRNDRDGRDLKGTWYMNGDRNKRAEINDNGRDLQAKNENGQTSRLEVDRRGNVHAPEWNGITGHIRGNR
Ga0132257_1002467131	3300015373	Arabidopsis Rhizosphere	DAKPAHGAAQSEILLEAVTGNGKFKEDKMKTKATLLSGVLLISGSLALPTPGFTRDDKDHGERAERSERHDRNDRDGRDLKGTWYMNGDRNKRAEINDNGRDLQAKNENGQKSRLEVDRRGNVHAPEWNGITGHIRGNRIEWDNGTTWTRG*
Ga0132257_1005715501	3300015373	Arabidopsis Rhizosphere	QLKENKMKTKAALLTGVLLISGSLAVPTPGFTGGDNDHGRRAERYDGHDRNDRDRRDLHGTWYMNGDRDKRAEINDRGRELEAKNENGQTSRLEVDRRGNVHAMDWNVIGHVRGNRIEWDNGTTWTRG*
Ga0132257_1024973992	3300015373	Arabidopsis Rhizosphere	LKEDKMKTKAAVLTGVLLISGSLALPTPGFTRDDKDYGKRAERSDRRDGDARDLQGTWYMNGDRNKRAEINRNGGEFQGKNENGQTSRLEVDRRGNVHAPEWNGVTGHIRGNRIEWDNGTTWTRG*
Ga0132255_1009406602	3300015374	Arabidopsis Rhizosphere	MKTKAAVLTGVLLISGSLALPTPGFTRDDKDYGKRAERSDRRDGDARDLQGTWYMNGDRNKRAEINRNGGEFQGKNENGQTSRLEVDRRGNVRAPEWNGVTGHIRGNRIEWDNGTTWTRG
Ga0132255_1018208131	3300015374	Arabidopsis Rhizosphere	KEDKMKTKALILTGVFLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG*
Ga0132255_1022233172	3300015374	Arabidopsis Rhizosphere	MKKAAVLTGVLLVSGSLALPTPGFTRDDKDYGRRAERSDRRDRDARDLQGTWYMNGDRNKRAEINHNGGEFQAKNENGQTSRLEVDHRGNGVTGHIRGNRIEWDNGTTWTRG*
Ga0132255_1030599052	3300015374	Arabidopsis Rhizosphere	VTGNGKFKEDKMKTKATLLSGVLLISGSLALPTPGFTRDDKDHGERAERSERHDRNDRDGRDLKGTWYMNGDRNKRAEINDNGRDLQAKNENGQTSRLEVDRRGNVHAPEWNGITGHIRGNRIEWDNGTTWTRG*
Ga0163161_119663771	3300017792	Switchgrass Rhizosphere	MKTKALILTGVFLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGIWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGRLRGNRIEWDNGTTWTRG
Ga0173481_108870932	3300019356	Soil	VHGAAQSEIPLEAVIGSSDFKEDKMKTKALILTGVLLISGSLTVPTSGLTAGDKDHGKRAERSDRHDRDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALD
Ga0173482_102341691	3300019361	Soil	LEAVMGSSDFKEDKMKTKALILTGVFLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGRLRGNRIEWDNGTTWTRG
Ga0197907_107444032	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKAAIVTSVLLISGSLAVPTPGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG
Ga0206356_107678222	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	VKPVHGAAQSEIPLEAVMGSSDFKEDKMKTKALILTGVLLISGSLTVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDQNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITG
Ga0206349_17493361	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	VHGAAQSEIPLEAVMGSSDFKEDKMKTKALILTGVFLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG
Ga0206351_101534393	3300020077	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKALILTGVFLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQVKNEDGKTSRLEVDRRGNVHALDWNGITGRLRGNRIEWDNGTTWTRG
Ga0206352_100829921	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	VHGAAQSEIPLEAVMGSSDFKEDKMKTKALILTGVLLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIERD
Ga0206354_109685153	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKALILTGVLLISGSLTVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG
Ga0206353_108311521	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKAAIVTSVLLISGSLAVPTPGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQVKNEDGKTSRLEVDRRGNVHALDWNGITGRLRGNRIEWDNGTTWTRG
Ga0154015_10745863	3300020610	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKALILTGVLLISGSLTVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNG
Ga0224712_101388203	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKAAIVTGVLLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDQNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNG
Ga0207697_100694151	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	VHGAAQSEIPLEAVMGSSDFKEDKMKTKALILTGVLLISGSLTVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQVKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG
Ga0207654_100249946	3300025911	Corn Rhizosphere	MKTKALILTGVFLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG
Ga0207707_103348832	3300025912	Corn Rhizosphere	MKTKAAIVTSVLLISGSLAVPTPGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDQNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG
Ga0207671_109926691	3300025914	Corn Rhizosphere	QMKTKAAIVTSVLLISGSLAVPTPGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDQNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTR
Ga0207662_113674621	3300025918	Switchgrass Rhizosphere	AVMGSSDFKEDKMKTKALILTGVFLISGSLAVPTPGLTAGDKDHGKRAERSDRHDKDARDLEGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG
Ga0207657_100253621	3300025919	Corn Rhizosphere	AGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG
Ga0207649_103026201	3300025920	Corn Rhizosphere	VHGAAQSEIPLEAVIESSVFKEDKMKTKALILTGVLLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG
Ga0207681_100936084	3300025923	Switchgrass Rhizosphere	MKTKALILTGVLLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG
Ga0207644_111765301	3300025931	Switchgrass Rhizosphere	LTGVLLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG
Ga0207706_100058485	3300025933	Corn Rhizosphere	MKTKALILTGVLLISGSLTVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQVKNEDGKTSRLEVDRRGNVHALDWNGITGRLRGNRIEWDNGTTWTRG
Ga0207709_106083072	3300025935	Miscanthus Rhizosphere	VHGAAQSEIPLEAVMGSSDFKEDKMKTKALILTGVFLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGDLRGNRIEWDNGTTWTRG
Ga0207704_110454281	3300025938	Miscanthus Rhizosphere	TSVLLISGSLAVPTPGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG
Ga0207689_104480441	3300025942	Miscanthus Rhizosphere	FMIRRVSSNRLATRLESFHVVWNVILSASKNSSKSAGVKPVHGAAQSEIPLEAVMGSSDFKEDKMKTKALILTGVLLISGSLTVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQVKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG
Ga0207668_115720511	3300025972	Switchgrass Rhizosphere	HTVWKVILSASKNSSKSAGAKPVHGAAQSEIPLEAVIGSSDFKEDKMKTKAAIVTGVLLISGSLAVPTPGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDRNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGRLRGNRIEWDNGTTWTRG
Ga0207658_109764892	3300025986	Switchgrass Rhizosphere	SLTVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG
Ga0207678_100293953	3300026067	Corn Rhizosphere	MKTKAAIVTGVLLISGSLAVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG
Ga0207675_1004713733	3300026118	Switchgrass Rhizosphere	MKTKALILTGVLLISGSLTVPTSGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALEWNGITGHLRGNRIEWDNGTTWTRG
Ga0310813_108759481	3300031716	Soil	LISGSLAVPTPGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDHNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG
Ga0310904_106462321	3300031854	Soil	MKTKAAVLTGVLLISGSLALPTTGFTRDDKDYGKRAERSDRRDRDARDLQGTWYMNGDRDKRAEINRNGGELHAKNENGQTSRLEVDRRGNVHAPEWNGVTGHIRGNRIEWDNGTTWTRG
Ga0310812_100684922	3300032421	Soil	MKTKAAIVTGVLLISGSLAVPTPGLTAGDKDHGKRAERSDRHDKDARDLQGTWYMNGDRNKRTEINDNGRELQGKNEDGKTSRLEVDRRGNVHALDWNGITGHLRGNRIEWDNGTTWTRG
Ga0310810_100925113	3300033412	Soil	MKTKATLLSGVLLISGSLALPTPGFTRDDKDHGERAERSERHDRNDRDGRDLKGTWYMNGDRNKRAEINDNGRDLQAKNENGQTSRLEVDRRGNVHAPEWNGITGHIRGNRIEWDNGTTWTRG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098007

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences