Metagenome / Metatranscriptome Family F097969

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097969
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	96 residues
Representative Sequence	VLKLLALVIALIIAAMVAGAYLHFNPAIPIFVILGFGIYMVGRIGGPRLPDGSHAGFGNTYGIYLHREDFVPPDPDSHSGGHLRDGVDPNEPKAR
Number of Associated Samples	90
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	64.42 %
% of genes near scaffold ends (potentially truncated)	29.81 %
% of genes from short scaffolds (< 2000 bps)	83.65 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.115 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.385 % of family members)
Environment Ontology (ENVO)	Unclassified (25.962 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.385 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 32.52% β-sheet: 0.00% Coil/Unstructured: 67.48%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF03466	LysR_substrate	39.42
PF13432	TPR_16	7.69
PF13431	TPR_17	6.73
PF00563	EAL	4.81
PF13414	TPR_11	3.85
PF01127	Sdh_cyt	3.85
PF05233	PHB_acc	2.88
PF07879	PHB_acc_N	1.92
PF01575	MaoC_dehydratas	0.96
PF02803	Thiolase_C	0.96
PF00912	Transgly	0.96
PF13561	adh_short_C2	0.96
PF00890	FAD_binding_2	0.96
PF07719	TPR_2	0.96
PF13185	GAF_2	0.96
PF00515	TPR_1	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	4.81
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	4.81
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	4.81
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	4.81
COG5394	Polyhydroxyalkanoate (PHA) synthesis regulator protein, binds DNA and PHA	Signal transduction mechanisms [T]	4.81
COG2009	Succinate dehydrogenase/fumarate reductase, cytochrome b subunit	Energy production and conversion [C]	3.85
COG2142	Succinate dehydrogenase, hydrophobic anchor subunit	Energy production and conversion [C]	3.85
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.96
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	0.96
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	0.96
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.12 %
Unclassified	root	N/A	27.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.12 %
Unclassified	root	N/A	27.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.12 %
Unclassified	root	N/A	27.88 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	61.54 %
Unclassified	root	N/A	27.88 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	58.65 %
Unclassified	root	N/A	27.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.88 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	23.08 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	23.08 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	6.73 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.88 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	23.08 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	6.73 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.92 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.96 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.88 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	23.08 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	6.73 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.92 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.88 %
Phenylobacterium aquaticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	23.08 %
unclassified Azospirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum	6.73 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.92 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.96 %
Bradyrhizobium sediminis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium sediminis	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.88 %
Phenylobacterium aquaticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	23.08 %
Azospirillum sp. B4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. B4	6.73 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.92 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.96 %
Bradyrhizobium sediminis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium sediminis	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459004\|F62QY1Z02HW3YN	Not Available	503	Open in IMG/M
3300003505\|JGIcombinedJ51221_10003824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4360	Open in IMG/M
3300004152\|Ga0062386_100823896	All Organisms → cellular organisms → Bacteria → Proteobacteria	765	Open in IMG/M
3300005332\|Ga0066388_100951952	All Organisms → cellular organisms → Bacteria → Proteobacteria	1429	Open in IMG/M
3300005434\|Ga0070709_11553671	Not Available	538	Open in IMG/M
3300005436\|Ga0070713_100896222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	853	Open in IMG/M
3300005437\|Ga0070710_10798673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. B4	674	Open in IMG/M
3300005439\|Ga0070711_101150159	Not Available	670	Open in IMG/M
3300005764\|Ga0066903_100924738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1582	Open in IMG/M
3300005764\|Ga0066903_101756470	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300005764\|Ga0066903_101781799	Not Available	1175	Open in IMG/M
3300005764\|Ga0066903_101794445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	1172	Open in IMG/M
3300005921\|Ga0070766_11015626	Not Available	571	Open in IMG/M
3300006057\|Ga0075026_100151382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1191	Open in IMG/M
3300006086\|Ga0075019_10152413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1352	Open in IMG/M
3300006162\|Ga0075030_100037692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4095	Open in IMG/M
3300006172\|Ga0075018_10471158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	650	Open in IMG/M
3300006174\|Ga0075014_100318919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	824	Open in IMG/M
3300006176\|Ga0070765_100144976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	2112	Open in IMG/M
3300006354\|Ga0075021_10123463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1551	Open in IMG/M
3300009101\|Ga0105247_10514157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium sediminis	874	Open in IMG/M
3300009522\|Ga0116218_1031570	All Organisms → cellular organisms → Bacteria	2380	Open in IMG/M
3300009698\|Ga0116216_10109273	All Organisms → cellular organisms → Bacteria	1702	Open in IMG/M
3300009792\|Ga0126374_11805548	Not Available	511	Open in IMG/M
3300010043\|Ga0126380_10657968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	835	Open in IMG/M
3300010046\|Ga0126384_10289977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	1341	Open in IMG/M
3300010046\|Ga0126384_10318768	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300010048\|Ga0126373_11506572	Not Available	738	Open in IMG/M
3300010358\|Ga0126370_11455022	Not Available	649	Open in IMG/M
3300010361\|Ga0126378_10425412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	1442	Open in IMG/M
3300010376\|Ga0126381_101290898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	1055	Open in IMG/M
3300010398\|Ga0126383_10281411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1651	Open in IMG/M
3300010398\|Ga0126383_13227305	Not Available	533	Open in IMG/M
3300012957\|Ga0164303_10422569	Not Available	830	Open in IMG/M
3300012971\|Ga0126369_12110833	Not Available	651	Open in IMG/M
3300012984\|Ga0164309_10524070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	912	Open in IMG/M
3300012985\|Ga0164308_10199175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1524	Open in IMG/M
3300012986\|Ga0164304_10355986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	1024	Open in IMG/M
3300012986\|Ga0164304_10704704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	767	Open in IMG/M
3300014968\|Ga0157379_11728216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. B4	613	Open in IMG/M
3300015371\|Ga0132258_11118746	All Organisms → cellular organisms → Bacteria	1991	Open in IMG/M
3300015374\|Ga0132255_100545373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1709	Open in IMG/M
3300016270\|Ga0182036_11754241	Not Available	525	Open in IMG/M
3300016294\|Ga0182041_10234062	All Organisms → cellular organisms → Bacteria	1485	Open in IMG/M
3300016294\|Ga0182041_10373597	All Organisms → cellular organisms → Bacteria	1205	Open in IMG/M
3300016319\|Ga0182033_11896531	Not Available	542	Open in IMG/M
3300016341\|Ga0182035_10599834	Not Available	951	Open in IMG/M
3300016404\|Ga0182037_10099881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2086	Open in IMG/M
3300016422\|Ga0182039_10226112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	1509	Open in IMG/M
3300016445\|Ga0182038_10772420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	841	Open in IMG/M
3300017822\|Ga0187802_10019535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2316	Open in IMG/M
3300017924\|Ga0187820_1029053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1425	Open in IMG/M
3300017936\|Ga0187821_10494178	Not Available	511	Open in IMG/M
3300017955\|Ga0187817_10077264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	2079	Open in IMG/M
3300017959\|Ga0187779_10031457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3056	Open in IMG/M
3300017961\|Ga0187778_10369211	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300017972\|Ga0187781_10031737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3648	Open in IMG/M
3300017973\|Ga0187780_10842129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. B4	665	Open in IMG/M
3300017973\|Ga0187780_10911884	Not Available	638	Open in IMG/M
3300017974\|Ga0187777_10108926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1825	Open in IMG/M
3300017974\|Ga0187777_10538797	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300017975\|Ga0187782_10111831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2014	Open in IMG/M
3300017993\|Ga0187823_10046644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1181	Open in IMG/M
3300018058\|Ga0187766_10445673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. B4	864	Open in IMG/M
3300018058\|Ga0187766_10791170	Not Available	662	Open in IMG/M
3300018060\|Ga0187765_10453264	Not Available	803	Open in IMG/M
3300018085\|Ga0187772_10610956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. B4	776	Open in IMG/M
3300018089\|Ga0187774_10180182	Not Available	1138	Open in IMG/M
3300020579\|Ga0210407_10053001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3032	Open in IMG/M
3300020579\|Ga0210407_11342114	Not Available	533	Open in IMG/M
3300020583\|Ga0210401_11457685	Not Available	542	Open in IMG/M
3300021168\|Ga0210406_10131709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2107	Open in IMG/M
3300021171\|Ga0210405_10143979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	1886	Open in IMG/M
3300021180\|Ga0210396_10411198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	1189	Open in IMG/M
3300021403\|Ga0210397_10183890	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300021405\|Ga0210387_11795408	Not Available	517	Open in IMG/M
3300021407\|Ga0210383_10239452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	1556	Open in IMG/M
3300022533\|Ga0242662_10007063	All Organisms → cellular organisms → Bacteria	2113	Open in IMG/M
3300025906\|Ga0207699_10879359	Not Available	661	Open in IMG/M
3300027855\|Ga0209693_10075989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1657	Open in IMG/M
3300027894\|Ga0209068_10204490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1087	Open in IMG/M
3300030494\|Ga0310037_10350300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. B4	620	Open in IMG/M
3300031231\|Ga0170824_114912843	Not Available	780	Open in IMG/M
3300031708\|Ga0310686_117735327	All Organisms → cellular organisms → Bacteria → Proteobacteria	535	Open in IMG/M
3300031754\|Ga0307475_10277519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	1344	Open in IMG/M
3300031823\|Ga0307478_10142688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1895	Open in IMG/M
3300031833\|Ga0310917_10119435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	1715	Open in IMG/M
3300031833\|Ga0310917_10851088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. B4	615	Open in IMG/M
3300031890\|Ga0306925_10943154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	884	Open in IMG/M
3300031910\|Ga0306923_11411579	Not Available	733	Open in IMG/M
3300031912\|Ga0306921_10685212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	1179	Open in IMG/M
3300031912\|Ga0306921_12458542	Not Available	542	Open in IMG/M
3300031941\|Ga0310912_10745886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	758	Open in IMG/M
3300031942\|Ga0310916_10260497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1463	Open in IMG/M
3300031954\|Ga0306926_11185221	Not Available	898	Open in IMG/M
3300032001\|Ga0306922_10628234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1136	Open in IMG/M
3300032035\|Ga0310911_10276204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	965	Open in IMG/M
3300032770\|Ga0335085_10053344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5448	Open in IMG/M
3300032783\|Ga0335079_10046754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4962	Open in IMG/M
3300032783\|Ga0335079_10630306	Not Available	1128	Open in IMG/M
3300032828\|Ga0335080_12143352	Not Available	538	Open in IMG/M
3300032892\|Ga0335081_10045407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	6935	Open in IMG/M
3300033158\|Ga0335077_10103331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3340	Open in IMG/M
3300033289\|Ga0310914_10615392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	979	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.15%
Host-Associated	Host-Associated	3.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.65%
Aquatic	Environmental → Aquatic	12.50%
Plants	Host-Associated → Plants	3.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.65%
Sediment	Environmental → Aquatic → Sediment	6.73%
Freshwater	Environmental → Aquatic → Freshwater	5.77%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	18.27%
Loam	Environmental → Terrestrial → Soil → Loam	13.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.73%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.92%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.23%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	18.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.73%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.46%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	12.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.58%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.77%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.81%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.92%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.96%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459004	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm (2)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4B_06877100	2170459004	Grass Soil	EATLSHSFFGRRVEGVPVPKLLALVIALIIAAMVAGAYLHFNPAIPIFMILGFGIYMVGRIGGLQFPEGTHVSFGDTYGVHLHGQDFVPPDTDSHSGGNLRDGVNPSERRRVD
JGIcombinedJ51221_100038245	3300003505	Forest Soil	VLKLLALVIALIIAAMVAGAYLHFNPAIPIFVILGFGIYMVGRIGGPRLPDGSHAGFGNTYGIYLHREDFVPLDPDSHSGGHLRDGVDPNEPKAR*
Ga0062386_1008238962	3300004152	Bog Forest Soil	VLKPLALVIALIIAAMVAGAYLHFNPAIPIFIILGFGIYMVGRIGGPQFPEGTHVSFGDTYGVHLHGQDFVPPDTDSHSGGNLRDGVNPNERKRVD*
Ga0066388_1009519522	3300005332	Tropical Forest Soil	VLKVAALVFGLIILVMVAAPYFHFNPVIPIFVILGFGIYMVGRIGGPQLPADTQVGFGNTYGVYLHREDFVPPDPDSHSGGHLRDGVDPNDPKAR*
Ga0070709_115536711	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VLKVAALVFGLIIVVMVAAPCFHFNPVIPIFVILGFGIYMVGRIGGPQLPADTQVGFGNTYGVYLHREDFVPPDPDSHSGGHLRDGVDPNDPKAR*
Ga0070713_1008962221	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	FGCTSNRDEALVLKVAALVFGLIIVVMVAAPCFHFNPVIPIFVILGFGIYMVGRIGGPQLPADTQVGFGNTYGVYLHREDFVPPDPDSHSGGHLRDGVDPNDPKAR*
Ga0070710_107986732	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LKLLALVIALIIAAMVAGAYLHFNPAIPIFVILGFGIYMVGRIGGPRLPDGSHAGFGNTYGIYLHREDFVPLDPDSHSGGHLRDGVDPNEPKAR*
Ga0070711_1011501591	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VPVVAVPVLKLLALVIALIIAAMVAGAYLHFNPAIPIFVILGFGIYMVGRIGGPRLPDGSHAGFGNTYRIYLHREDFVPLDADSHNGGHLRDGVDPNEPKAR*
Ga0066903_1009247381	3300005764	Tropical Forest Soil	GLEGVQSSGLKLHALVIAMIGAATIAGAYFRFNPAIPIFVILGFGIYMVGRIGAPRLPRGTHISFGATPGVYLHGRDFVPPDPDSKAAANLRDGVDPNEPKTR*
Ga0066903_1017564702	3300005764	Tropical Forest Soil	VLKVAALVFGLIIVVMIAGPFFHFNPLIPILLILGFGVYMVGRIGGPQLPEGTQVGFGDTYGVYLHREDFVLPDPDSHSGGHLRDGVDPNDPKAR*
Ga0066903_1017817992	3300005764	Tropical Forest Soil	LRLLTAVILLIIGAVVAGAYFDFNPALPIFVILGFGIYMVGRNGPQLPEGTHVSFGDTYGVYLHRQDFVPPDSDSHSGGTLRDGVDPADPKKTGQ*
Ga0066903_1017944452	3300005764	Tropical Forest Soil	LFKLLALVIALIGVAMIAGAYFHFSPAIPIFIILGFGIYMVGRIGGPQLPQGAHVSFGDTHGVYLHGQDFVPPDMDSHSGGNLRDGVDPNEPKAR*
Ga0070766_110156261	3300005921	Soil	VLKLLALVIALIIAAMVDGAYLHFNPAIPIFVILGFGIYMVGRIGGPRLPDGSHAGFGNTYGIYLHREDFVPLDPDSHSGGHLRDGVDPNEPKAR*
Ga0075026_1001513822	3300006057	Watersheds	MEAVPLLKLLALVIALIIAAMVAGAYLHFNPAIPIFIILGFGIYRVGRIGGPQFPEGTHVSFGDTYGVHLHGQDFVPPDTDSHSGGNLRDGVNPNERKRVD*
Ga0075019_101524132	3300006086	Watersheds	MEAVPVLKLLALVIALIIAAMVAGAYLHFNPAIPIFIILGFGIYMVGRIGGPQFPEGTHVSFGDTYGVHLHGQDFVPPDSDSHSGGNLRDGVNPNERKRVD*
Ga0075030_1000376923	3300006162	Watersheds	MEAVPVLKLLALVIALIIAAMVAGAYLHFNPAIPIFIILGFGIYRVGRIGGPQFPEGTHVSFGDTYGVHLHGQDFVPPDTDSHSGGNLRDGVNPNERKRVD*
Ga0075018_104711582	3300006172	Watersheds	AGAYLHFNPAIPIFIILGFGIYRVGRIGGPQFPEGTHVSFGDTGNLRDGVNPNERKRVD*
Ga0075014_1003189192	3300006174	Watersheds	LALVIALIIAAMVAGAYLHFNPAIPIFIILGFGIYMVGRIGGPQFPEGTHVSFGDTYGVHLHGQDFVPPDTDSHSGGNLRDGVNPNERKRVD*
Ga0070765_1001449763	3300006176	Soil	VLKLLALVIALIIAAMVAGAYLHFNPAIPIFVILGFGIYMVGRIGGPRLPDGSHAGFGNTYRIYLHREDFVPLDPDSHSGGHLRDGVDPNEPKAR*
Ga0075021_101234632	3300006354	Watersheds	MEAVPVLKLLALVIALIIAAMVAGAYLHFNPAIPIFIILGFGIYRVGRIGGPQFPEGTHVSFGDTYGVHLHGQDFVPPDSDSHSGGNLRDGVNPNERKRVD*
Ga0105247_105141572	3300009101	Switchgrass Rhizosphere	LFGCTSNRDEALVLKVAALVFGLIIVVMVAAPYFHFNPVIPIFVILGFGIYMVGRIGGPQLPADTQVGFGNTYGVYLHREDFVPPDPDSHSGGHLRDGVDPNDPKAR*
Ga0116218_10315703	3300009522	Peatlands Soil	MEAVPVLKLLALVIALIIAAMVAGAYLHFNPAIPIFIILGFGIYMVGHVGGPQFPEGTHVSFGDTYGVHLHGQDFVPPDTDTHSGGNLRDGVNPNERKRVD*
Ga0116216_101092732	3300009698	Peatlands Soil	MEAVPVLKLLALVIALIIAAMVAGAYLHFNPAIPIFIILGFGIYMVGRVGGPQFPEGTHVSFGDTYGVHLHGQDFVPPDTDTHSGGNLRDGVNPNERKRVD*
Ga0126374_118055481	3300009792	Tropical Forest Soil	LKLLTAVILLIIGAVVAGAYFDFNPALPIFVILGFGIYMVSRNGPQLPEGTHVSFGDTYGVYLHRQDFVPPDTDSHSGGTLRDGVDPADPKNTGQ*
Ga0126380_106579681	3300010043	Tropical Forest Soil	VLFLRTPNRDEALVLKVAALVFGLIILVMVAAPYFHFNPVIPIFVILGFGIYMVGRIGGPQLPADTQVGFGNTYGVYLHREDFVPPDPDSHSGGHLRDGVDPNDPKAR*
Ga0126384_102899772	3300010046	Tropical Forest Soil	ESSLFKLLALVIALIGFAMIAGAYFHFSPAIPIFIILGFGIYMVGRTGGPQLPQGTHVSFGDTHGVYLHGQDFVPPDMDSHSGGNLRDGVDPNEPKAR*
Ga0126384_103187682	3300010046	Tropical Forest Soil	LKLLTAVILLIIGAVVAGAYFDFNPALPIFVILGFGIYMVGRSGPRLPEGTHVSFGDTYGVYLHRQDFVPPDTDSHSGGTLRDGVDPADPKNTGQ*
Ga0126373_115065721	3300010048	Tropical Forest Soil	LTAVILLIIGAVVAGAYFDFNPALPIFVILGFGIYMVGRNGPQLPEGTHVSFGDTYGVYLHRQDFVPPDSDSHSGGTLRDGVDPADPKKTGQ*
Ga0126370_114550221	3300010358	Tropical Forest Soil	LKLLTSVILLIIGAVVAGAYFDFNPALPIFVILGFGIYMVGRNGPQLPEGTHVSFGDTYGVYLHRQDFVPPDTDSHSGGTLRDGVDPADPKKTGQ*
Ga0126378_104254121	3300010361	Tropical Forest Soil	LFKLLALVIALIGVAMIAGAYFHFSPAIPIFIILGFGIYMVGRIGGPQLPQGTHVSFGDTHGVYLHGQDFVPPDMDSHSGGNLRDGVDPNEPKAR*
Ga0126381_1012908982	3300010376	Tropical Forest Soil	LFKLLALVIALIGVAMIAGAYFHFSPAIPIFIILGFGIYMVGRIGGPQLLQGAHVSFGDTHGVYLHGQDFVPPDMDSHSGGNLRDGVDPNEPKAR*
Ga0126383_102814112	3300010398	Tropical Forest Soil	LFKLLALVIALIGVAMIAGAYFHFSPAIPIFIILGFGIYMVGRTGGPQLPQGTHVSFGDTHGVYLHGQDFVPPDMDSHSGGNLRDGVDPNEPKAR*
Ga0126383_132273051	3300010398	Tropical Forest Soil	LEGVQSSGLKLHALVIAMIGAATIAGAYFRFNPAIPIFVILGFGIYMVGRIGAPRLPRGTHISFGATPGVYLHGRDFVPPDPDSKAAANLRDGVDPNEPKTR*
Ga0164303_104225691	3300012957	Soil	VLKLLALVIALIIAAMVAGAYLHFNPAIPIFVILGFGIYMVGRIGGPRLPDGSHAGFGNTYGIYLHREDFVPLDPDSHSGGHLRDG
Ga0126369_121108332	3300012971	Tropical Forest Soil	MLKVLLAVIVLIAAAMFAGAYFHINPVLGIFLILGWGIYMVGRIGGPSLPEGSHVWGNTYGVSVSGRDFAPTDTDSHSGGNFRDGVDPNELGKGR*
Ga0164309_105240702	3300012984	Soil	VLKLLALVIALIIAAMVAGAYLHFNPAIPIFVILGFGIYMVGRIGGPRLPDGSHAGFGNTYRIYLHREDFVPLDADSH
Ga0164308_101991752	3300012985	Soil	VLKLRALVIALIIAAMVAGAYLHFNPAIPIFVILGFGIYMVGRIGGPRLPDGSHAGFGNTYGIYLHREDFVPLDPDSHSGGHLRDGVDPNEPKAR*
Ga0164304_103559861	3300012986	Soil	LFGCTSNRDEALVLKVAALVFGLIILVMVAAPYSHFNPVIPIFVILGFGIYMVGRIGGPQLPADTQVGFGNTYGVYLHREDFVPPDPDSHSGGHLRDGVDPNDPKAR*
Ga0164304_107047042	3300012986	Soil	AVPVLKLLALVIALIIAAMVAGAYLHFNPAIPIFVILGFGIYMVGRIGGPRLPDGSHAGFGNTYGIYRHREDFVPLDPDSHSGGHLRDGVDPNEPKAR*
Ga0157379_117282162	3300014968	Switchgrass Rhizosphere	VVMVAAPYFHFNPVIPIFVILGFGIYMVGRIGGPQLPADTQMGFGNTYGVYLHREDFVPPDPDSHSGGHLRDGVDPNDPKAR*
Ga0132258_111187462	3300015371	Arabidopsis Rhizosphere	LFGCTSNRDEALVLKVAALVFGLIIVVMVAAPCFHFNPVIPIFVILGFGIYMVGRIGGPQLPADTQMGFGNTYGVYLHREDFVPPDPDSHSGGHLRDGVDPNDPKAR*
Ga0132255_1005453732	3300015374	Arabidopsis Rhizosphere	LFGCTSNRDEALVLKVAALVFGLIIVVMVAAPYFHFNPVIPIFVILGFGIYMVGRIGGPQLPADTQMGFGNTYGVYLHREDFVPPDPDSHSGGHLRDGVDPNDPKAR*
Ga0182036_117542411	3300016270	Soil	LGRERVESSVLKLLALVIAPISAAMIAGAYFHFNPAIPIFIILGFGIYKVGRIGGPQLPQGTHVSFGDTHGVYLHGQDFVPPDMDSHSGGNLRDGVNPN
Ga0182041_102340622	3300016294	Soil	VLKVAALVFGLIIVVMVAAPYFHFNPLIPILLILGFGVYMVGRIGGPQLPDGTQVGFGDTYGVYLDREDFVLPDPDSHSGGHLRDGVDPNDPKAR
Ga0182041_103735971	3300016294	Soil	VLKLLALVIAPISAAMIAGAYFHFNPAIPIFIILGFGIYMVGRVGAPQLPQGTHVSFGDTHGVYLHGQDFVPPDMDSHSGGNLRDGVDPNEPKAR
Ga0182033_118965311	3300016319	Soil	VLKAAALVFGLIIVVMVAGPYFHFNPLIPILLILGFGVYMVGRIGGPQLPEGTQVGFGDTYGVYLDREDFVLPDPDSHSGGHLRDGVDPNDPKAR
Ga0182035_105998342	3300016341	Soil	LGRERVESSVLKLLALVIAPISAAMIAGAYFHFNPAIPIFIILGFGIYMVGRIGGPQLPQGTHVSFGDTHGVYLHGQDFVPPDMDSHSGGNLRDGVDPNEPKAR
Ga0182037_100998811	3300016404	Soil	MIKLVMAVNLLIGAAFVAGAYFDFNPAIPTFVILAFGIYKVGSIGGPILPDDAQVSFGDTYGVYLEGQDFVPRDTDSHSGPNFRDGVD
Ga0182039_102261122	3300016422	Soil	LGRERVESSVLKLLALVIAPISAAMIAGAYFHFNPAIPIFIILGFGIYMVGRIGGPQLPQGTHVSFGDTHGVCLHGQDFVPPDMDSHSGGNLRDSVYPNEPKAR
Ga0182038_107724201	3300016445	Soil	LVIGLIVAAMVAGAYLHLNPAIPIFIILGFGIYMVGRIGGPQLPPDAHVGFGNTYGVYLHRDDFVPPDPDSHSGGHLRDGVDPNEPKAR
Ga0187802_100195352	3300017822	Freshwater Sediment	VLKPLALVIALIIAAMVAGAYLHFNPAIPIFIILGFGIYRVGRIGGPQFPEGTHVSFGDTYGVHLHGQDFVPPDSDSHSGGNLRDGVNPNERKRVD
Ga0187820_10290532	3300017924	Freshwater Sediment	MEAVPALKLLALVIALIIAAMVAGAYLHFNPAIPIFIILGFGIYMVGRIGGPQFPEGTHVSFGDTYGVHLHGQDFVPPDTDSHSGGNLRDGVNPNERKRVD
Ga0187821_104941781	3300017936	Freshwater Sediment	VLKPLALVIALIIAAMVAGAYLHFNPAIPIFIILGFGIYRVGRIGGPQFPEGTHVSFGDTYGVHLHGQDFVPPDTDSHSGGNLRDGVNPNERKRVD
Ga0187817_100772643	3300017955	Freshwater Sediment	MEGGPVLKPLALVIALIIAAMVAGAYLHFNPAIPIFIILGFGIYMVGRIGGPQFPEGTHVSFGDTYGVHLHGQDFVPPDTDSHSGGNLRDGVNPNERKRVD
Ga0187779_100314572	3300017959	Tropical Peatland	MTKFVLTVILLIAAALSAGTYFDFNPAIPIFVILAYGIYKVGSIGGPVLPDDTHVSFGNTYGVYLEGQDFVPPDTDSHSGPNLRDGVDPNDHQAR
Ga0187778_103692112	3300017961	Tropical Peatland	MTKFVLTVILLIAAALSAGTYFDFNPAIPIFVILAYGIYKVGSIGGPVLPDDTHVSFGNTYGIYLGGQDFVPPDTDSHSGPNFRDGVDPNDPSGKR
Ga0187781_100317372	3300017972	Tropical Peatland	VLRILALVFGLIIAASVACAYLHFNPVIPIFLILGLGVCMIGRIGPHFPQGTHVSFGDTYGVYLHREDYVPPDPDSHSGGHLRDGVDPNEPKAR
Ga0187780_108421292	3300017973	Tropical Peatland	KVPMLKLLALVIALIIAAMAAAAYLHLNPAIPIFIILGFGIYMVGRIGGPQLPPDSHVGFGDTYGVYLHRDDFVPPDPDSHSGGHLRDGVDPNEPKAR
Ga0187780_109118841	3300017973	Tropical Peatland	MTKLVITVVLLIAAALGAGAYFDFNPAIPIFVILAYGIYKVGSIGGPVLPDDTHVSFGNTYGVYLEGQDFVPPDTDSHSGPNLRDGVDPNDHQAR
Ga0187777_101089261	3300017974	Tropical Peatland	VLKLLALVIGLIIAAMVAGAYLHLNPAIPIFIILGFGIYMVGRIGGPQLPPDSHVGFGDTYGVYLQRDDFVPPDPDSHSGGHLRDGVDPNEPKAR
Ga0187777_105387971	3300017974	Tropical Peatland	MTKFVLTVILLIAAALSAGTYFDFNPAIPIFVILAYGIYKVGSIGGPVLPDATHVSFGNTYGIYLGGQDFVPPDSDSHSGPNFRDGVDPNDP
Ga0187782_101118311	3300017975	Tropical Peatland	VLRILALVFGLIIAASVACAYLHFNPVIPIFLILGLGVYMIGRIGPHFPQGTHVSFGDTYGVYLHREDYVPPDPDSHSGGHLRDGVDPNEPKAR
Ga0187823_100466442	3300017993	Freshwater Sediment	VLKPLALVIALIIAAMVAGAYLHFNPAIPIFIILGFGIYMVGRIGGPQFPEGTHVSFGDTYGVHLHGQDFVPPDTDSHSGGNLRDGVNPNERKRVD
Ga0187766_104456732	3300018058	Tropical Peatland	VLKLLALVIGLIIAAMVAGAYLHLNPAIPIFIILGFGIYMVGRIGGPQLPPDAHVGFGNTYGVYLHRDDFVPPDPDSHSGGHLRDGVDPNEPKAR
Ga0187766_107911702	3300018058	Tropical Peatland	ALGAGAYFDFNPAIPIFVILAYGIYKVGSIGGPVLPDDTHVSFGNTYGIYLGGQDFVPPDTDSHSGPNFRDGVDPNDPSGKR
Ga0187765_104532641	3300018060	Tropical Peatland	MTKLVIAIVLSIAASLVAGAYFDFNPAILIFVILGFGIYGIGRIGGPALPAGSRIGPGSAYGIYLEGRDFVPPDTDSHSGPNFRDGGDPNDLHKAR
Ga0187772_106109561	3300018085	Tropical Peatland	MLKLLALVIALIIAAMAAAAYLHLNPAIPIFIILGFGIYMVGRIGGPQLPPDAHVGFGNTYGVYLHRDDFVPPDPDSHSGGHLRDGVDPNEPKAR
Ga0187774_101801822	3300018089	Tropical Peatland	FNPAIAIFAILAYGIYKVGSIGGPVLPGDTHVSFGNTYGIYLEGRDFLPPEDSHSGPNFRDGVDPNELHKAR
Ga0210407_100530012	3300020579	Soil	VLKLLALVIALIIAAMVAGAYLHFNPAIPIFVILGFGIYMVGRIGGPRLPDGSHAGFGNTYGIYLHREDFVPLDPDSHSGGHLRDGVDPNEPKAR
Ga0210407_113421141	3300020579	Soil	QVEEATLSHSFFGRRMEAVPLLKLLALVIALIIAAMVAGAYLHFNPAIPIFIILGFGIYRVGRIGGPQFPEGTHVSFGDTYGVHLHGQDFVPPDSGSHSGGNLRGGVDPNERKRVD
Ga0210401_114576851	3300020583	Soil	MIAGGYFHFNPAIPIFIILGFGIYMVGCIGGPQLPKGTHISFGDTHGVYLHGRDFVPPDTDSHSGGNLRDGVDPNEPTF
Ga0210406_101317094	3300021168	Soil	HSFFGCRTEAVPVLKLLALVIALIIAAMVAGAYLHFNPAIPIFVILGFGIYMVGRIGGPRLPDGSHAGFGNTYGIYLHREDFVPLDPDSHSGGHLRDGVDPNEPKAR
Ga0210405_101439792	3300021171	Soil	VLKLLALVIALIIAAMVAGAYLHFNPAIPIFVILGFGIYMVGRIGGPRLPDGSHAGFGNTYGIYLHREDFVPPDPDSHSGGHLRDGVDPNEPKAR
Ga0210396_104111981	3300021180	Soil	MIAGGYFHFNPAIPIFIILGFGIYMVGRIGGPQLPKGTHISFGDTHGVYLHGRDFVPPDTDSHSGGNLRDGVDPNEPKAR
Ga0210397_101838902	3300021403	Soil	VLKLLALVIALIIAAMVAGAYLHFNPAIPIFVILGFGIYMVGRIGGPRLPDGSHAGFGNTYGIYLHREDFVPPDPDSHSG
Ga0210387_117954081	3300021405	Soil	EATLSHSFFGRRMEAVPVLKLLALVIALIIAAMVAGAYLHFNPAIPIFIILGFGIYRVGRIGGPQFPEGTHVSFGDTYGVHLHGQDFVPPDSDSHSGGNLRDGVNPNERKRVD
Ga0210383_102394522	3300021407	Soil	VLKLLALVIALIIAAMVAGAYLHFNPAIPIFVILGFGIYMVGRIGGPRLPDGSHAGFGNTYGIYLHREDFVPPDPDSHSGRHLRDGVDPNEPKAR
Ga0242662_100070631	3300022533	Soil	VLKLLELVIALIIAAMVAGAYLHFNPAIPIFVILGFGIYMVGRIGGPRLPDGSHAGFGNTYGIYLHREDFVPPDPDSHSGG
Ga0207699_108793591	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VLKVAALVFGLIIVVMVAAPCFHFNPVIPIFVILGFGIYMVGRIGGPQLPADTQVGFGNTYGVYLHREDFVPPDPDSHSGGHLRDGVDPNDPKAR
Ga0209693_100759892	3300027855	Soil	VLKLLALVIALIIAAMVDGAYLHFNPAIPIFVILGFGIYMVGRIGGPRLPDGSHAGFGNTYGIYLHREDFVPLDPDSHSGGHLRDGVDPNEPKAR
Ga0209068_102044902	3300027894	Watersheds	MEAVPVLKLLALVIALIIAAMVAGAYLHFNPAIPIFIILGFGIYRVGRIGGPQFPEGTHVSFGDTYGVHLHGQDFVPPDSDSHSGGNLRDGVNPNERKRVD
Ga0310037_103503002	3300030494	Peatlands Soil	IALIIAAMVAGAYLHFNPAIPIFIILGFGIYMVGRVGGPQFPEGTHVSFGDTYGVHLHGQDFVPPDTDTHSGGNLRDGVNPNERKRVD
Ga0170824_1149128432	3300031231	Forest Soil	VLKLLALVIALIIAAMVAGAYLHFNPAIPIFIILGFGIYRVGRIGGPQFPEGSHVIFGDTYGVHLHGQDFVPPDSDSHSGGNLRDGVNPNERKRVD
Ga0310686_1177353271	3300031708	Soil	LLKLLALVIALIIAAMVAGAYLHFNPAIPIFIILGFGIYRVGRIGGPQFPEGTHVSFGDTYGVHLHGQDFVPPDTDSHSGGNLRDGVNPNERKRVD
Ga0307475_102775192	3300031754	Hardwood Forest Soil	MVAGAYLHFNPAIPIFIILGFGIYRVGRIGGPQFPEGTHVSFGDTYGVHLHGQDFVPPDSDSHSGGNLRDGVNPNERKRVD
Ga0307478_101426881	3300031823	Hardwood Forest Soil	FKLLVAVIALIIATLVAGAYFHLNPAIPIFIILGFGIYMVGRIGGPRLPDGSHAGFGNTYGIYLHREDFVPLDPDSHSGGHLRDGVDPNEPKAR
Ga0310917_101194353	3300031833	Soil	LGRERVESSVLKLLALVIALISAAMIAGAYFHFNPAIPIFIILGFGIYMVGRVGAPQLPQGTDVSFGDTHGVYLHGQDFVPPDMDSHSGGNLRDGVDPNEPKAR
Ga0310917_108510882	3300031833	Soil	LIIVVMVAGPYFHFNPLIPILLILGFGVYMVGRIGGPQLPEGTQVGFGNTYGVYLRREDFVLPDPDSHSGGLLHDGVDPNDAKAR
Ga0306925_109431541	3300031890	Soil	LGRERVESSVLKLLALVIALISAAMIAGAYFHFNPAIPIFIILGFGIYMVGRVGAPQLPQGTHVSFGDTHGVYLHGQDFVPPDMDSHSGGNLRDGVDPNEPKAR
Ga0306923_114115791	3300031910	Soil	LGRERVESSVLKLLALVIAPISAAMIAGAYFHFNPAIPIFIILGFGIYMVGRVGAPQLPQGTHVSFGDTHGVYLHGQDFVPPDMDSHSGGNLRDGVDPNEPKAR
Ga0306921_106852122	3300031912	Soil	MLKLLALVIGLIVAAMVAGAYLHLNPAIPIFIILGFGIYMVGRIGGPQLPPDAHVGFGNTYGVYLHRHDFVRPDPDSHSGGHLRDGVDPNEPKAR
Ga0306921_124585421	3300031912	Soil	LKLLTAVILLIIGAVVAGTYFDFNPALPIFVILGFGIYMVGRNGPQLPEGTHVSFGDTYGVYLHRQDFVPPDTDSHSGGTLRDGVDPADPKKTGQ
Ga0310912_107458861	3300031941	Soil	VIAPISAAMIAGAYFHFNPAIPIFIILGFGIYMVGRIGGPQLPQGTHVSFGDTHGVYLHGQDFVPPDMDSHSGGNLRDGVDPNEPKAR
Ga0310916_102604972	3300031942	Soil	VLKAAALVFGLIIVVMVAGPYFHFNPLIPILLILGFGVYMVGRIGGPQLPEGTQLGFGNTYGVYLHREDFVLPDPDSHSGGLLHDGVDPNDPKAR
Ga0306926_111852211	3300031954	Soil	LRLLTAVILLIIGAVVAGAYFDFNPALPIFVILGFGIYMVGRNGPQLPEGTHVSFGDTYGVYLHRQDFVPPDTDSHSGGTLRDGVDPADPKKTGQ
Ga0306922_106282342	3300032001	Soil	LGRERVESSVLKLLALVIALISAAMIAGAYFHFNPAIPIFIILGFGIYMVGRIGGPQLPQGTHVSFGDTHGVYLHGQDFVPPDMDSHSGGNLRDGVDPNEPKAR
Ga0310911_102762042	3300032035	Soil	LGRERVESSVLKLLALVIALISAAMIAGAYFHFNPAIPIFIILGFGIYMVGRIGGPQLPQGTHVGFGDTHGVYLHGQDFVPPDMDSHSGGNLRDGVDPNEPKAR
Ga0335085_100533443	3300032770	Soil	MTMTKLVITVILLIAAALAAGAYFDFNPAIPIFAILGFGIYRVGSIGGPMLPDDTHVGFGNTYGIYLEGRDFVPPDTDSHSGPNFRDGVDPGDPGNKR
Ga0335079_100467543	3300032783	Soil	LVTAGGDNIVRPIYDLVTVPMTKLVIAIVLSIAASLVAGAYFDFNPAILIFVILGFGIYGIGRIGGPALPAGSRIGPGSAYGIYLEGRDFVPPDTDSHSGPNFRDGVDPNDLHKAR
Ga0335079_106303062	3300032783	Soil	MTMTKLVITVILLIAAALAAGAYFDFNPAIPIFAILGFGIYKVGSIGGPMLPDDTHVGFGNTYGIYLEGRDFVPPDTDSHSGSNFRDGVDPDDPGNKR
Ga0335080_121433522	3300032828	Soil	MTKLVIAIVLSIAASLVAGAYFDFNPAILIFVILGFGIYGIGRIGGPALPAGSRIGPGSAYGIYLEGRDFVPPDTDSHSGPNF
Ga0335081_100454072	3300032892	Soil	MTMTKLVITVILLIAAALAAGAYFDFNPAIAIFVILGFGIYKVGSIGGPMLPGDTHLTFGSTYGIYLEGQDFVPPDTDSHSGPNFRDGVDPNDPGNKR
Ga0335077_101033311	3300033158	Soil	MTMTKLVVTVIVLIAAALGVGIYFDFNPAIAIFAILAYGIYKVGSIGGPVLPGDTHVSFGNTYGIYLEGQDFVPPEDSHSGPNFRDGVDPNDLDKAR
Ga0310914_106153922	3300033289	Soil	NTNEAPVLKVAAMVFGLIIVVMVAGPYFHFNPLIPILLILGFGVYMVGRIGGPQLPEGTQVGFGNTYGVYLHREDFVLPDPDSHSGGLLHDGVDPNDAKAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097969

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences