Metagenome / Metatranscriptome Family F097968

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097968
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	157 residues
Representative Sequence	VGSVDLPDQPDEPGRAERARDASASRPPMREMPDPDERGRAYEAVRAHVSADATGQGSYWDKVPKFRQMWADHERRWPERQPAAEPDRSADPAGTYRSRGGFKLDPERHAETIGAIGRMRETEPSISADMQAVEKENTCGGRLAGFDRRIKGDDRLKEKVAE
Number of Associated Samples	93
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	63.46 %
% of genes near scaffold ends (potentially truncated)	96.15 %
% of genes from short scaffolds (< 2000 bps)	96.15 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.423 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (31.731 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.346 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.37% β-sheet: 1.05% Coil/Unstructured: 61.58%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF05016	ParE_toxin	5.77
PF09957	VapB_antitoxin	1.92
PF13673	Acetyltransf_10	1.92
PF12796	Ank_2	0.96
PF02913	FAD-oxidase_C	0.96
PF00583	Acetyltransf_1	0.96
PF02577	BFN_dom	0.96
PF08530	PepX_C	0.96
PF00797	Acetyltransf_2	0.96
PF00892	EamA	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.96
COG1259	Bifunctional DNase/RNase	General function prediction only [R]	0.96
COG2162	Arylamine N-acetyltransferase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.96
COG2936	Predicted acyl esterase	General function prediction only [R]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.38 %
Unclassified	root	N/A	34.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.42 %
Unclassified	root	N/A	34.62 %
Viruses	superkingdom	All Organisms → Viruses	0.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.42 %
Unclassified	root	N/A	34.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	62.50 %
Unclassified	root	N/A	34.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	62.50 %
Unclassified	root	N/A	34.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	59.62 %
Unclassified	root	N/A	34.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	42.31 %
Unclassified	root	N/A	34.62 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	4.81 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3.85 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	2.88 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.92 %
Glycomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	42.31 %
Unclassified	root	N/A	34.62 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	4.81 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	3.85 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	2.88 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.92 %
Glycomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	42.31 %
Unclassified	root	N/A	34.62 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	3.85 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3.85 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	2.88 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	1.92 %
Glycomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Glycomyces	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	42.31 %
Unclassified	root	N/A	34.62 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3.85 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	2.88 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	2.88 %
Amycolatopsis xylanica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis xylanica	1.92 %
Glycomyces artemisiae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Glycomyces → Glycomyces artemisiae	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	42.31 %
Unclassified	root	N/A	34.62 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3.85 %
Nocardioides sp. CF8	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. CF8	2.88 %
Streptomyces sp. CNH287	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNH287	2.88 %
Amycolatopsis xylanica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis xylanica	1.92 %
Glycomyces artemisiae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Glycomyces → Glycomyces artemisiae	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_111479158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300001867\|JGI12627J18819_10040701	All Organisms → cellular organisms → Bacteria	1937	Open in IMG/M
3300004479\|Ga0062595_101428199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300005178\|Ga0066688_10322699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	998	Open in IMG/M
3300005437\|Ga0070710_10452642	Not Available	870	Open in IMG/M
3300005454\|Ga0066687_10586024	Not Available	662	Open in IMG/M
3300005471\|Ga0070698_101262104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	688	Open in IMG/M
3300005561\|Ga0066699_10310929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1123	Open in IMG/M
3300005575\|Ga0066702_10286441	Not Available	1005	Open in IMG/M
3300005578\|Ga0068854_101332507	Not Available	647	Open in IMG/M
3300006028\|Ga0070717_11681419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300006172\|Ga0075018_10530177	Not Available	618	Open in IMG/M
3300006574\|Ga0074056_11785299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. CF8	586	Open in IMG/M
3300006578\|Ga0074059_11402294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. CF8	516	Open in IMG/M
3300006579\|Ga0074054_11304906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M
3300006581\|Ga0074048_13102056	Not Available	546	Open in IMG/M
3300006796\|Ga0066665_10448803	All Organisms → Viruses → Predicted Viral	1064	Open in IMG/M
3300006804\|Ga0079221_10654116	Not Available	721	Open in IMG/M
3300006804\|Ga0079221_11281778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. CF8	575	Open in IMG/M
3300009089\|Ga0099828_10406673	Not Available	1227	Open in IMG/M
3300009093\|Ga0105240_12642214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300009137\|Ga0066709_100327277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2095	Open in IMG/M
3300009137\|Ga0066709_103397507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNH287	578	Open in IMG/M
3300009137\|Ga0066709_103661959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558	Open in IMG/M
3300010046\|Ga0126384_10716393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	888	Open in IMG/M
3300010303\|Ga0134082_10455926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300010323\|Ga0134086_10200628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	745	Open in IMG/M
3300010359\|Ga0126376_10498587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1126	Open in IMG/M
3300010373\|Ga0134128_10421870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1489	Open in IMG/M
3300010401\|Ga0134121_10768932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	921	Open in IMG/M
3300011106\|Ga0151489_1518064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNH287	578	Open in IMG/M
3300011269\|Ga0137392_10614865	Not Available	901	Open in IMG/M
3300012211\|Ga0137377_10798772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	876	Open in IMG/M
3300012350\|Ga0137372_10661639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	760	Open in IMG/M
3300012354\|Ga0137366_10252465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1307	Open in IMG/M
3300012356\|Ga0137371_10484016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	956	Open in IMG/M
3300012499\|Ga0157350_1032441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300012971\|Ga0126369_13312557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300013296\|Ga0157374_11252084	Not Available	763	Open in IMG/M
3300013297\|Ga0157378_12403327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300013306\|Ga0163162_11866282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	688	Open in IMG/M
3300014325\|Ga0163163_11197777	Not Available	822	Open in IMG/M
3300014968\|Ga0157379_10366988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1320	Open in IMG/M
3300015371\|Ga0132258_11880943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1507	Open in IMG/M
3300015373\|Ga0132257_101670872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis xylanica	816	Open in IMG/M
3300016270\|Ga0182036_10840603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	750	Open in IMG/M
3300016341\|Ga0182035_11156025	Not Available	690	Open in IMG/M
3300016357\|Ga0182032_11051774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	697	Open in IMG/M
3300016371\|Ga0182034_11441277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M
3300016404\|Ga0182037_10458862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1061	Open in IMG/M
3300016422\|Ga0182039_12113151	Not Available	519	Open in IMG/M
3300017974\|Ga0187777_10629333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	758	Open in IMG/M
3300017975\|Ga0187782_10397274	Not Available	1047	Open in IMG/M
3300018060\|Ga0187765_11319744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300018090\|Ga0187770_11798206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300018433\|Ga0066667_10332512	Not Available	1199	Open in IMG/M
3300018468\|Ga0066662_10987320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	833	Open in IMG/M
3300021475\|Ga0210392_11405362	Not Available	522	Open in IMG/M
3300021560\|Ga0126371_12997098	Not Available	572	Open in IMG/M
3300025916\|Ga0207663_10130913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1733	Open in IMG/M
3300025929\|Ga0207664_10213344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1671	Open in IMG/M
3300027725\|Ga0209178_1166415	Not Available	768	Open in IMG/M
3300027775\|Ga0209177_10005288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2632	Open in IMG/M
3300031231\|Ga0170824_106323210	Not Available	515	Open in IMG/M
3300031544\|Ga0318534_10484251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis xylanica	707	Open in IMG/M
3300031545\|Ga0318541_10426063	Not Available	742	Open in IMG/M
3300031549\|Ga0318571_10397824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300031668\|Ga0318542_10484854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300031681\|Ga0318572_10695682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Glycomyces → Glycomyces artemisiae	605	Open in IMG/M
3300031682\|Ga0318560_10662388	Not Available	565	Open in IMG/M
3300031723\|Ga0318493_10259091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	931	Open in IMG/M
3300031724\|Ga0318500_10290174	Not Available	800	Open in IMG/M
3300031736\|Ga0318501_10703588	Not Available	557	Open in IMG/M
3300031747\|Ga0318502_10562019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	686	Open in IMG/M
3300031747\|Ga0318502_10883791	Not Available	543	Open in IMG/M
3300031748\|Ga0318492_10131765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1250	Open in IMG/M
3300031793\|Ga0318548_10188434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1011	Open in IMG/M
3300031796\|Ga0318576_10168746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1025	Open in IMG/M
3300031798\|Ga0318523_10259650	Not Available	868	Open in IMG/M
3300031805\|Ga0318497_10340844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	837	Open in IMG/M
3300031819\|Ga0318568_10507433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	752	Open in IMG/M
3300031820\|Ga0307473_11174433	Not Available	569	Open in IMG/M
3300031859\|Ga0318527_10340106	Not Available	639	Open in IMG/M
3300031860\|Ga0318495_10489836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300031890\|Ga0306925_10365381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1549	Open in IMG/M
3300031893\|Ga0318536_10578062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300031910\|Ga0306923_10680551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1147	Open in IMG/M
3300032010\|Ga0318569_10016542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2897	Open in IMG/M
3300032035\|Ga0310911_10682519	Not Available	595	Open in IMG/M
3300032059\|Ga0318533_11126186	Not Available	575	Open in IMG/M
3300032066\|Ga0318514_10469076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	669	Open in IMG/M
3300032770\|Ga0335085_10199315	All Organisms → cellular organisms → Bacteria	2453	Open in IMG/M
3300032770\|Ga0335085_11075774	Not Available	863	Open in IMG/M
3300032770\|Ga0335085_12100788	Not Available	570	Open in IMG/M
3300032805\|Ga0335078_11532140	Not Available	743	Open in IMG/M
3300032954\|Ga0335083_10353971	Not Available	1270	Open in IMG/M
3300032954\|Ga0335083_10613874	Not Available	894	Open in IMG/M
3300032954\|Ga0335083_10945736	Not Available	681	Open in IMG/M
3300032955\|Ga0335076_11113826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNH287	672	Open in IMG/M
3300032955\|Ga0335076_11609303	Not Available	537	Open in IMG/M
3300032955\|Ga0335076_11748934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300033158\|Ga0335077_10623354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1122	Open in IMG/M
3300033158\|Ga0335077_10777153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	978	Open in IMG/M
3300033289\|Ga0310914_11754433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.35%
Host-Associated	Host-Associated	8.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.38%
Plants	Host-Associated → Plants	8.65%
Aquatic	Environmental → Aquatic	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.85%
Sediment	Environmental → Aquatic → Sediment	0.96%
Roots	Host-Associated → Plants → Roots	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.23%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.38%
Loam	Environmental → Terrestrial → Soil → Loam	5.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	34.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.23%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	15.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.58%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.96%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.00%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	11.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.96%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012499	Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.yng.030610	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1114791581	3300000956	Soil	TVSPVMEDRRSVDLPDQPDVPDRAERARDASAARPQMREMPDPDERGRAYEAARAHVSADTTEHGSYWAEVPRFTQMWADHQRHWPERQAPAEPDRSADLAGTYHSRGGFKLDPERHAETVGAIGQMRETEPSISADMQAVEKENACGGWLAGFDRRIKGDDRLKEKVAEQ
JGI12627J18819_100407013	3300001867	Forest Soil	VGSVDLPDQPDEPSRAERARDASPARPHMREMPDPDERGRAYEATRAHVSADATDQGSYWDKVPRFRQMWADHERRWPERQTTAEPDRSDDPAGTYRSRGGFKLNSERHADTIGAIGRMRETEPSISADMQAV
Ga0062595_1014281991	3300004479	Soil	VDLPDQPDETGRAERARDFGAARPQMREMPDPDERGRAYEAARAHISADATDGSYWHEVPKFTQMWADHERRWPERQPAAEPDRPADPAGTYRSRGGFKLDPERHAETIGAIGRMRETEPSISADMQAVEKENVCGGWLAGFDRRIKGDDRLKEKVAEQ
Ga0066688_103226992	3300005178	Soil	MGGPVGSVDLPDQPDEPSRAERARDASAARSQMREMPDPDERGRAYEATRAHVSAETADATEHGRYWDEVPRFRKMWADHERRWPERQSAAEPDRPDPAGTYRSRGGFTLDPQRHAETIGAIGRMRETEPSISADMQAVEKENACGGWLAGFDRRIKGEDRLKEKVAEQA
Ga0070710_104526422	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VDLPDQPDEASRAERARDASAARPQMPEMPDPDERGRAYEAARAHVSADTTERGSYWAEVPRFTQMWADHQRRWPVRQAPAEPDRSADPAGTYRSRGGFKLDPERHAETVGAIGQMRETEPSISADMQA
Ga0066687_105860241	3300005454	Soil	MGGPVGSVDLPDQPDEPSRAERARDASAARSQMREMPDPDERGRAYEATRAHVSAETADATEHGRYWDEVPRFRKMWADHERRWPERQSAAEPDRPDPAGMYRSRGGFTLDPQRHAETIGAIGRMRETEPSISADMQAAEKENACGGWL
Ga0070698_1012621042	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VDLPDQPDEPSRAQRARDASAARSQMREMPDPDERGRAYEATRAHVSAETADRAGQGRLPEATEQGSYRDEVPRFREMWADHERRWPERQPAAEPDRSADPAGTYRSRGGFKLDPERHAETIGAIGRMRETEPPISADMQAVEKENACGGWLAGFDRRIKGDDRLK
Ga0066699_103109291	3300005561	Soil	VGSVDLPDQPDEPSRAERARDASAARSQMREMPDPDERGRAYEATRAHVSAETADATEHGRYWDEVPRFRKMWADHERRWPERQSAAEPDRPDPAGMYRSRGGFTLDPQRHAETIGAIGRMRETEPSISADMQAVEKENACGGWLAGFDRRIKGEDRLKEKVAEQAAAEPDKSSSAILRRFPDALRFTCCFEPDHYNRGYYDIRARLEDV
Ga0066702_102864412	3300005575	Soil	MGGPVGSVDLPDQPDEPSRAERARDASAARSQMREMPDPDERGRAYEATRAHVSAETAERAGQGRPPDAAEQGSYWDEVPRFREMWAGHEGRWPERQPAAEPDRSADPAGTYRSRGGFRLDPERHAETIGAIGRMRETEPSISADMQAAEKENACGGWLA
Ga0068854_1013325071	3300005578	Corn Rhizosphere	VDLPDQPDETGRAERARDFGAARPQMREMPDPDERGRAYEAARAHVSADATDGSYWHEVPKFRQMWADHERRWPERQPAAEPDRPADPAGTYRSRGGFRLDPERHAEIIGAIGRMRETEPSISADMQAVEKE
Ga0070717_116814191	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VGSVDLPDQPDEPSRAERARDASAARSQMREMPDPDERGRAYEATRAHVSAETADATEHGRYWDEVPRFRKMWADHERRWPERQPAAEPDRPDPAGTYRSRGGFTLDPERHAETIGAIGRMRETEPSISADMQAVEKENACGGWLAGFDRRIKG
Ga0075018_105301771	3300006172	Watersheds	MEDRRSVDLPDQPDVPDRAERARDASAARPQMREMPDPDERGRAYEAARAHVSADATDGSYWHEVPKFTQMWADHERRWPERQPATEPDRPADPAGTYRSRGGFKLDPERHAETIGAIGRMRETEPSISADM
Ga0074056_117852991	3300006574	Soil	MEDRRSVDLPDQPDVPDRAERARDASAARPQMREMPDPDERGRAYEAARAHVSADTTEHGSYWAEVPRFTQMWADHQRRWPERQAPAEPDRSADPAGTYRSRGGFKLDPERHAETVGAIGQMRETEPSISADMQAVEKENACGGWLAGFDRRIKGDI
Ga0074059_114022941	3300006578	Soil	MEDRRSVDLPDQPDVPDRAERARDASAARPQMREMPDPDERGRAYEAARAHVSADTTEHGSYWAEVPRFTQMWADHQRRWPERRAPAEPDRSADLAGTYRSRGGFKLDPERHAETVGAIGQMRETEPSISADMQAVEKENACGGWLAGFDRRI
Ga0074054_113049061	3300006579	Soil	DQPDVPDRAERASDASAARPQMREMPDPDERGRAYEAARAHVSADTTEHGSYWAEVPRFTQMWADHQRRWPERQAPAEPDRSADLAGTYRSRGGFKLDPERHAETVRAIGQMRETEPSISADMQAVEKENACGGWLAGFDRRIKGDDRLKEKVAEQAAAEPDKSSSAILRKIPDALRFTCCFEPDNYSRGYYDMKTRLEDAGHEMYQSTNY
Ga0074048_131020562	3300006581	Soil	MEDRRSVDLPDQPDVPDRAERARDASAARPQMREMPDPDERGRAYEVARAHVSADTTEHGSYWAEVPRFTQMWADHQRRWPERQAPAEPDRSADLAGTYRSRGGFKLDPERHAETVGAIGQMRETE
Ga0066665_104488031	3300006796	Soil	VGSVDLPDQPDETGRAERARDASAARPQMQEMPDPDERGRAYEAARAHVSADATDGSYWHEVPKFTQMWADHERRWPERQAAAEPDRPADPAGTYRSMGGFRLDPERHAETIGAIGRMRETEPSISADIQAAEKENACGGWLGGFDRRIKGEDRLKEKVAEQAAAEPDRSSSAILRKIQMLCASRAASSRTTTSGAITTSRRGWSTQDMRCTRAPTTGPILSTKESTHGG*
Ga0079221_106541162	3300006804	Agricultural Soil	MEDRRSVDLPDQPDVPDRAKRARDASAARPQMREMPDPDERGRAYEAARAHVSADTTEHGSYWAEVPRFTQMWADHQRRWPVRQAPAEPDRSADPAGTYRSRGGFKLDPERHAETVGAIGQMRETEPSISADMQAAEKENACGGWLAGFDRRIKGDDRLKEKVAEQAAAEPDKSSS
Ga0079221_112817781	3300006804	Agricultural Soil	MEDRRSVDLPDQPDVPDRAERARDASAGRPQMREMPDPDERGRAYEAARAHVSADTTEHGSYWAEVPRFTQMWANHQRRWPERQAPAEPDRSADPAGTYRSRGGFKLDPERHAETVRAIGQMRETEPSISADMQAVEKENACGGWLAGFDPMPFTSAWSADVA*
Ga0099828_104066732	3300009089	Vadose Zone Soil	MREMPDPDERGRVYEATRAHVAETAERAGPGRPPDATEQGSYRDEVPRFREMWADHERRWPERQPAAEPDRSADPAGTYRSRGGFKLDPERHAETIGAIGRMRETEPPISADMQAAEKENACGGWLAGFDRRIKGDDRLKEK
Ga0105240_126422141	3300009093	Corn Rhizosphere	VDLPDQPDETGRAERARDFGAARPQMREMPDPDERGRAYEAARAHVSADATDGSYWHEVPKFRQMWADHERRWPERQPAAEPDRPADPAGTYRSRGGFRLDPERHAEIIGAIGRMRETEPPISADMQGVEKENTCGGWLAGFDRRIKSDDRL
Ga0066709_1003272771	3300009137	Grasslands Soil	MREMPDPDERGRAYEATRAHVSAETADATEHGRYWDEVPRFRKMWADHERRWPERQSAAEPDRPDPAGTYRSRGGFTLDPQRHAETIGAIGRMRETEPSISADMQAVEKENACGGWLAGFDRRIKGEDRLKEKVAEQAAAEPDKSSSAILRKIPDALRFTCCFEPD
Ga0066709_1033975071	3300009137	Grasslands Soil	ERARDASAARSQMREMPDPDERGRAYEATRAHVSAETAERAGQGRPPDAAEQGSYWDEVPRFREMWAGHEGRWPERQPAAEPDRSADPAGTYRSRGGFRLDPERHAETIGAIGRMRETEPSISADMQAAEKENACGGWLAGFDRRIKGEDRLKEKVAEQAAAEPDKSSSAILRKIPDALRFTCCFEPDHYSR
Ga0066709_1036619591	3300009137	Grasslands Soil	DETGRAERARDASAARPQMQEMPDPDERGRAYEAARAHVSADATDGSYWHEVPKFTQMWADHERRWPERQAAAEPDRPADPAGTYRSKGGFKLDPERHAETIGAIGRMRETEPSISADLQAVEKENVCGGWLAGFDRRIKGDDRLKEKVAEQAAAEPDRSSSAILRKIQMLCASRAASSRTTTSG
Ga0126384_107163932	3300010046	Tropical Forest Soil	MREVPDPDERGRAYEATRAYVSADAAEHGSYWDEVPRFRQMWADHERRWPERQPVAEPDRSADPAGTYRSRGGFELDPERHAETIGAIGRIRETEPSISADMQAVEKENACGGWLAGFDHRVKGDDRLKEKVAEQAAAEPDK
Ga0134082_104559261	3300010303	Grasslands Soil	MREMPDPDERGRAYEATRAHVSAETADATEHGRYWDEVPRFRKMWADHERRWPERQSAAEPDRPDPAGTYRSRGGFTLDPQQHAETIGAIGRMRETEPSISADMQAVEKENACGGWLAGFDRRIKGEDRLKEKVAEQAAAE
Ga0134086_102006281	3300010323	Grasslands Soil	MPDPDERGRAYEATRAHVSAETADATEHGRYWDEVPRFRKMWADHERRWPERQSAAEPDRSADPAGTYRSRGGFRLDPERHAETIGAIGRMRETEPSISADMQAVEKENACGGWLAGFDRRIKGEDRLKEKVAEQAAAEPDK
Ga0126376_104985871	3300010359	Tropical Forest Soil	MRETPDPDERGRAYEAARVRVSADATDQGSYWDKIPRFRQMWADHERRWPERQPAAEPEGSADPAGTYRSRGGFKLNPERHAETIEAIGRMRETEPSISADMQAVEKENACGGWLAGFDHRVKGDDRLKEKVAEQAAAEPDKSSSAILR
Ga0134128_104218701	3300010373	Terrestrial Soil	VDLPDQPDEASRAERARNASAARPQKREMPDPDERGRAYEATRVHASADATEQGSYWDKIPRFGQMWAEHERRWPERQPAAEPEGSADPAGTYRSRGGFKLDPERHAETIGAIGRMREAEPPISADMQAVERENTCGGWLAGFDRRIKGDDRLKEKMAEQAAAEPDKSSLAILRKIPDAL
Ga0134121_107689321	3300010401	Terrestrial Soil	VDLPDQPDEASRAERARNASAARPQKREMPDPDERGRAYEATRVHASADATEQGSYWDKIPRFGQMWAEHERRWPERQPAAEPEGSADPAGTYRSRGGFKLDPERHAETIGAIGRMREAEPPISADMQAVERENTCGGWLAGFDRRIKG
Ga0151489_15180641	3300011106	Soil	SVDLPDQPDELSRAERARNASAGRPQMREMPDPDERGRAYEAARAHVSADAADGSYWHEVPKFTQMWADHEKRWPERQSPAEPDRSADPAETYRSRGGFRLDPERHAETIGAIGRMRETEPSISADMQAVEKENTCGGWLAGFDRRIKGDDRLKEKVAEQAAAEPDKSSSAILRKIPDALRFTCCFEPDNYV
Ga0137392_106148651	3300011269	Vadose Zone Soil	MRDMPDPDERGRAYEATRAHAAETAERAGPGRPPDATGQGSYRDEVPRFRQMWADHERRWPERRPAAEPDRPADPAGTYRSRGGFKLDPERHAETIGAIGRMRETEPPISADMQAAEKENACGGRLAGFDRRIKGDDRLKEKVAEQAAAEPDKSSSAI
Ga0137377_107987721	3300012211	Vadose Zone Soil	MPDPDERGRAYEATRAHVSAETADATEHGRYWDEVPRFRKMWADHERRWPERQSAAEPDRPDPAGTYRSRGGFTLDQQRHAEAIGAIGRMRETEPSISADMQAVEKENACGGWLAGFDRRIKGEDRLKEKVAEQA
Ga0137372_106616392	3300012350	Vadose Zone Soil	MERARDASAARSQMREMPDPDERGRVYEATRAHVSADATEHGSYWDEVPRFTQMWADHERRWPERQPAAEQDRSADPAGTYRSRGGFKLDPERHAETIGAIGRMRETEPSISADMQAVEKENACGGWLAGFDRRIKGDDRLKEKVAEQAAAEPDRSSS
Ga0137366_102524651	3300012354	Vadose Zone Soil	VDLPDQPDETGRAERARDFGAARPQMREMPGPDERSRAYEAARAHVSADATDGSYWHEVPKFTQMWADHERRWPERQPAAEPDRPADPAGTYRSRGGFKLDPERHAETIGAIGRMRETEPSISADMQAVEKENVCGGWLAGFDRRIKGDDRLK
Ga0137371_104840161	3300012356	Vadose Zone Soil	VDLPDQPDETGRAERARDFGAARPQMREMPDPDERSRAYEAARAHVSADATDGSYWHEVPKFTQMWADHERRWPERQPAAEPDRPADPAGTYRSRGGFKLDPERHAETIGAIGRMRETEPSISADMQAVEKENVCGGWLAGFDRRIKGDDRLKEKVAEQAAAEPDKSSSAILRKIP
Ga0157350_10324411	3300012499	Unplanted Soil	VDLPDQPDETGRAERARDFGAARPQMREMPDPDERGRAYEAARAHISADATDGSYWHEVPKFTQMWADHERRWPERQPAAEPDRPADPAGTYRSRGGFKLDPERHAETIGAIGRMRETEPSISADMQAVEKENVCGGWLAGFDRRIKGDDRLKEKVAEQAAAEPDKSSSAILRK
Ga0126369_133125571	3300012971	Tropical Forest Soil	MRELPDPDERGRAYEAMRAHVSADATDQGSYWDKVPRFRQMWADHERRWPERQPAAEPDRSADPAGTYRSRGGFKLDPERHAETIGAIGRVREAEPSISADMQAVEKENTCGGWLAGFDHRIKDDGRLKEKVAEQAAAEPDKSSSAILRKIPDALR
Ga0157374_112520841	3300013296	Miscanthus Rhizosphere	VDLPDQPDETGRAERARDFGAARPQMREMPDPDERGRAYEAARAHISADATDGSYWHEVPKFTQMWADHERRWPERQPAAEPDRPADPAGTYRSRGGFKLDPERHAEIIGAIGRMRETEPSISADMQA
Ga0157378_124033271	3300013297	Miscanthus Rhizosphere	VDLPDQPDETGRAERARDFGAARPQMREMPDPDERGRAYEAARAHVSADATDGSYWHEVPKFTQMWAHHERRWPERQPAAEPDRPADPAGTYRSRGGFRRDPERHAEIIGAIGRMRETEPSISADMQAVEKENACGGWLAGFDRRIKGD
Ga0163162_118662822	3300013306	Switchgrass Rhizosphere	VDLPDQPDETGRAERARDFGAARPQMREMADPAERGRAYEAARAHISADATDGSYWHEVPKFTQMWADHERRWPERQPAAEPDRPADPVGTYRSRGGFKLDPERHAEIIGAIGRMRETEPSISADMQAVEKENVCGGWLAGFDRRIKGDD
Ga0163163_111977771	3300014325	Switchgrass Rhizosphere	VDLPDQPDETGRAERARDFGAARPQMREMPDPDERGRAYEAARAHVSADATDGSYWHEVPKFTQMWADHQRRWPERQPAAEPDRPADPAGTYRSRGGFKLDPERHAEIIGAIGRMRETEPSISADMQAAEKENACGGWLAGFDRRIKGDDRLKEKVAEQ
Ga0157379_103669883	3300014968	Switchgrass Rhizosphere	VDLPDQPDETGRAERARDFGAARPQMREMPDPDERGRAYEAARAHVSADATDGSYWHEVPKFTQMWADHERRWPERQPAAEPDRPADPAGTYRSRGGFRLDPERHAEIIGAIGRMRETEPSSSADMQAVEK
Ga0132258_118809431	3300015371	Arabidopsis Rhizosphere	MREMPDPDERGRAYEATRAHVSADATDQGSYWDKVPRFRQMWADHERRWPERQTTAEPDRSDDPAGTYRSRGGFKLNSERHADTIGAIGRMRETEPSISADMQAVEKENTCGGWLAGFDRRIKGDDRLKEKVAEQAAAEPDKPSSAILRKIPDALRFTYCFEPDNYVRGYHDIKARLEDAGHEMYQSTNYWADPEYKG
Ga0132257_1016708721	3300015373	Arabidopsis Rhizosphere	MPDPDERGRAYEAARAHASADATDQGSYWDKVPRFRQMWADHERRWPERQTTAEPDRSDDPAGTYRSRGGFKLNSERHADTIGAIGRMRETEPSISADMQAVEKENTCGGWLAGFDRRIKGDDRLKEKVAEQAAAEPDKPSSAILRKIPDALRFTYCFEPDNYVRGYHDIKARLEDAGHEMYQSTNYWADPEYKGMNTRWITQ
Ga0182036_108406031	3300016270	Soil	VGSVDLPDQPDEPSRAERARDASAARPREIPDPDERGRAYEATRAHVSADGPERRSFWDEVPGFRQMWADHEGRWPERQPATEPDRSADPAGTYRSRGGFKMDPERHAETIEAIVRVRETEPSISADMQAVEKENACGGWLAGFD
Ga0182035_111560251	3300016341	Soil	VGSVDLPDQPDEPSRADRACDASTARPREIPDPDERGRAYEATRVHVCADATGQGNYWDEVPEFRQMWADHERRWPERQPAAEPGRPADPAGTYRSRSGFKLNPERHAETVGAIGRLRETEPSISADMQAVEKENT
Ga0182032_110517741	3300016357	Soil	VGSVDLPDQPDEPSWAERARDASAARREIPDPDERGRAYEATRVHVCADATGQGNYWDEVPEFRQMWADHERRWPERQPAAEPDRPADPAGTYRSRGGFKLNPERHAEIIGAIGRIRETEPAISADMQAVEKENTCGGWLAGFDRRIKDDDRLKEKAAEQAAAEPDKSSSAILQKIPDALRFTCCFGPDSYVSGYYDIKA
Ga0182034_114412771	3300016371	Soil	VGSVDLPDQPDEPSRAERARDASAARPREIPDPDERGRAYEATRVHVCADATGQGSYWDEVPEFRQMWADHERRWPERQPAAEPDRPADPAGTYRSRGGFKLAPERHAEAIRAIDRIRETEPTISADMQAVEKENTCGGWLAGFDRRIKGADR
Ga0182037_104588623	3300016404	Soil	VGSVDLPDQPDEPGRAERARDASASRPPMREMPDPDERGRAYEAVRAHVSADATGQGSYWDKVPKFRQMWADHERRWPERQPAAEPDRSADPAGTYRSRGGFKLDPERHAETIGAIGRMRETEPSISADMQAVEKENTCGGRLAGFDRRIKGDDRLKEKVAE
Ga0182039_121131511	3300016422	Soil	VGSVDLPDQPDEPSRAERARDASAARPREIPDPDERGRAYEATRVHVCADATGQGNYWDEVPEFRQMWADHERRWPERQPAAEPDRPADPAGTYRSRGGFKLNPERHAEIIGAIGRIRETEPAISAD
Ga0187777_106293332	3300017974	Tropical Peatland	VGSVDLPDQPDEASRAERARDASAARPPKREMPDPDERGRAYDEMRVHASADAADQGSYWDKVPGFRQMWADHETRWPERPPAAEPDRAADPAGTYRSRGGLKLDPERHAETIAAIGRLRKTEPSISADMQVVEKENACGGWLAGFVRRIKGDDRLKEKVAEQAAAEPDKPSSAILR
Ga0187782_103972742	3300017975	Tropical Peatland	MPDPDERGRVYEATRAHVSAETADEASSGRRPDESEQPNYWIEVARFRDMWADHERRWPERQPTVEGGRSADPPGWYRSKGGFMMNPERHAETVDAIDRVRETEPAISADMRTIEKENTHGGWLAGF
Ga0187765_113197441	3300018060	Tropical Peatland	PEERGRVYEATRAHVSAETSERVAPGRQPDATEQGRYWDEVPRFRKTWADHERRWPERQPTAEPDRAADPAGTYRSKGGFKLDPERHAETIEAIGRMRETEPSISADMQAVEKENTCGGWLAGFDRRIKGDDRLKEKVDHPVFP
Ga0187770_117982061	3300018090	Tropical Peatland	TEQGSYWDEVPRFREKWTDHERRWPERQATAEPDRSADPAGTYHSKGGFKLGPERHAETIEAISRMRETEPSISADMQAVEKENTCGGWLAGFDRRIKGDDRLKEKVAEQAAAEP
Ga0066667_103325121	3300018433	Grasslands Soil	MGGPVGSVDLPDQPDEPSRAERARDASAARSQMREMPDPDERGRAYEATRAHVSAETAERAGQGRPPDAAEQGSYWDEVPRFREMWAGHEGRWPERQPAAEPDRSADPAGTYRSRGGFRLDPERHAETIGAIGRMRETEPSISADM
Ga0066662_109873201	3300018468	Grasslands Soil	VGSVDLPDQPDEPSRAERARDASAARSQMREMPDPDERGRAYEATRAHVSAETADATEHGRYWDEVPRFRKMWADHERRWPERQSAAEPDRPDPGGTYRSRGGFTLDPQRHAETIGAIGGMRETEPSISADMQAVEKENACGGWLAGFDRRIKGEDRLKEKVAEQAAAEPDKSSSAILRKIPDALRFTCCFEPDHYN
Ga0210392_114053621	3300021475	Soil	VDLPDQPDELSRAERARNASVGRPQMRETPDPDERGRAYEATRAHVSADAAEQGNYWDEVPRFRQMWADHEKRWPERQPAAEPDRSADPAGTYRSGGGFKLDPERHAETIGAIGRIRETEPTI
Ga0126371_129970981	3300021560	Tropical Forest Soil	VGSVDLPDQPDEPSRAERARDASGDRPPMRDMPDPDERGRAYEATRAHACADATDQGSYWEKVPRFRQMWADHERRWPERQPAAEPDRPADQAGTYRSRGGFKLDPERHAETIGAIGRVRETEPAIS
Ga0207663_101309134	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VDLPDQPDETGRAERARDFGAARPQMREMPDPDERGRAYEAARAHISADATDGSYWHEVPKFTQMWADHERRWPERQPAAEPDRPADPAGTYRSRGGFKLDPERHAETIGAIGRMRETEPSISADMQAVEKENVCGGWLAGFDRRIKGD
Ga0207664_102133441	3300025929	Agricultural Soil	MEDRRSVDLPDQPDVPDRAKRARDASAARPQMREMPDPDERGRAYEAARAHVSADTTEHGSYWAEVPRFTQMWADHQRRWPVRQAPAEPDRSADPAGTYRSRGGFKLDPERHAETVGAIGQMRETEPSISADMQAAEKENACGGWLAGFDRRIKGDDRLKEKVAEQAAAEPDKSSSAILRKIP
Ga0209178_11664151	3300027725	Agricultural Soil	MEDRRSVDLPDQPDVPDRAKRARDASAARPQMREMPDPDERGRAYEAARAHVSADTTEHGSYWAEVPRFTQMWADHQRRWPVRQAPAEPDRSADPAGTYRSRGGFKLDPERHAETVGAIGQMRETEPSISADMQAAEKENACGGWLAGFDRRIKGDDRLKEKVAEQAAAEPDKSSSAILR
Ga0209177_100052881	3300027775	Agricultural Soil	VDLPDQPDVPDRAERARDASAARPQMREMPDPDERGRAYEAARAHVSADTTEHGSYWAEVPRFTQMWANHQRRWPERQAPAEPDRSADPAGTYRSRGGFKLDPERHAETVRAIGQMRETEPSISADMQAVEKENACGGWLAGFDPMPFTSAWSADVA
Ga0170824_1063232101	3300031231	Forest Soil	VDLPDQPDVPDRAERASDASAARPQMREMPDPDERGRAYEAARAHVSADTTEHGSYWAEVPRFTQMWADHQRRWPERQAPAEPDHSADLVGTYRSRGGFKLDPERHAETVGAIGQMRETEPSISADMQVVEKE
Ga0318534_104842511	3300031544	Soil	DGSTVGSVDLPDQPDEPGRAERALDASAALPHIREMPDPEERGRVYEAARAHVSAETAERAATSRQPDATEQGSYWDEVPKFREMWADHERRWPERQAIAERDRSADPAGTYRSQGGFKLDPERHAETIVGIGRIRETEPSISADMQAVERENTCGGWLAGFDRHIKGDDRLKEKVAEQVAAEPDKSSSAILRKIPDALRFTCCFEPDNYIRGHHDIKARLEGVGHEMYQSTNYW
Ga0318541_104260631	3300031545	Soil	VGSVDLPDQPDEPSRADRACDASTARPREIPDPDERGRAYEATRVHVCADATGQGNYWDEVPEFRQMWADHERRWPERQPAAEPDRPADPAGTYRSRGGFKLAPERHAEAIRAIDRIRETEPTISADM
Ga0318571_103978241	3300031549	Soil	VGSVDLPDQPDEPSRADRACDASTARPREIPDPDERGRAYEATRVHVCADATGQGNYWDEVPEFRQMWADHERRWPERQPAAEPDRPADPAGTYRSRGGFKLNPERHAEIIGAIGRIRETEPAISAEMQAVEKENTCGGWLAGFDRRIKDDDRLKEKVAE
Ga0318542_104848541	3300031668	Soil	VGSVDLPDQPDEPSRADRACDASTARPREIPDPDERGRAYEATRVHVCADATGQGNYWDEVPEFRQMWADHERRWPERQPAAEPDRPADPAGTYRSRGGFKLNPERHAEIIGAIGRIRETEPAISAEMQAVEKENTCGGWLAGFDRRIKDDDRLKEKVAEQAAAEPDKSSSAILQKIPD
Ga0318572_106956821	3300031681	Soil	EPSRAERARDASPARPQMHEMPDPDERGRVYEATRAHVSADATDQGSYWEKVPRFRQMWADHERRWPERQTTAEPDRSDDPAGTYRSRGGFKLNPERHADTIGAIGRLRETEPSISADMQTVEKENPCGGWLAGFDRRIKGDDRLKEKVAEQAAAEPDKPSSAILRKIPDALRFTCCFEPDNYVRGYYDIKARLEDAGHEM
Ga0318560_106623881	3300031682	Soil	VGSVDLPDQPDEPSRADRACDASTARPREIPDPDERGRAYEATRVHVCADAAGQGSYWDKVPKFRQMWADHERRWPERQPAAEPDRPADPAGTYRSRGGFKLDPERHAETIGAIGRIRETEPAISADMQAVEKENTCGGWLAG
Ga0318493_102590911	3300031723	Soil	VGSVDLPDQPDEPGRAERALDASAALPHIREMPDPEERGRVYEAARAHVSAETAERAATSRQPDATEQGSYWDEVPKFREMWADHERRWPERQAIAERDRSADPAGTYRSQGGFKLDPERHAETIVGIGRIRETEPSISADMQAVERENTCGGWLAGFDRHIKGDDRLKEKVAEQVAAEPDKSSSAILRK
Ga0318500_102901741	3300031724	Soil	VGSVDLPDQPDEPSRADRACDASTARPREIPDPDERGRAYEATRVHVCADATGQGNYWDEVPEFRQMWADHERRWPERQPAAEPDRPADPAGTYRSRGGFKLNPERHAEIIGAIGRIRETEPAISAEMQAVEKENTCGGWLA
Ga0318501_107035881	3300031736	Soil	VGSVDLPDQPDEPSRADRACDASTARPREIPDPDERGRAYEATRVHVCADATGQGNYWDEVPEFRQMWADHERRWPERQPAAEPDRPADPAGTYRSRGGFKLNPERHAEIIGAIGRIRETEPAISAEMQAVE
Ga0318502_105620191	3300031747	Soil	VGSVDLPDQPDEPGRAERARDASASRPPMREMPDPDERGRAYEAVRAHVSADATGQGSYWDKVPKFRQMWADHERRWPEQQAAAEPDRAADPAGTYRSRGGFKLDPERHAETIGAIGRIRETEPAISAEMQAVEKENTCGGWLAGFDHRIKDDDRL
Ga0318502_108837911	3300031747	Soil	VGSVDLPDQPDEPGRAERALDASAALPHIREMPDPEERGRVYEAARAHVSAETAERAATSRQPDATEQGSYWDEVPKFREMWADHERRWPERQAIAERDRSADPAGTYRSQGGFKLDPERHAETIVGIGRIRETEPSISADMQAVERENTCGGWLA
Ga0318492_101317651	3300031748	Soil	VGSVDLPDQPDEPGRAERARDASASRPPMREMPDPDERGRAYEAVRAHVSADATGQGSYWDKVPKFRQMWADHERRWPERQPAAEPDRSADPAGTYRSRGGFKLDPERHAETIGAIGRMRETEPSISADMQAVEK
Ga0318548_101884341	3300031793	Soil	VGSVDLPDQPDEPGRAERARDASASRPPMREMPDPDERGRAYEAVRAHVSADATGQGSYWDKVPKFRQMWADHERRWPERQPAAEPDRSADPAGTYRSRGGFKLDPERHAETIGAIGRMRETEPSISADMQ
Ga0318576_101687463	3300031796	Soil	VGSVDLPDQPDEPGRAERARDASASRPPMREMPDPDERGRAYEAVRAHVSADATGQGSYWDKVPKFRQMWADHERRWPERQPAAEPDRSADPAGTYRSRGGFKLDPERHAETIGAIGRMRETEPSI
Ga0318523_102596503	3300031798	Soil	VGSVDLPDQPDEPGRAERARDASASRPPMREMPDPDERGRAYEAVRAHVSADATGQGSYWDKVPKFRQMWADHERRWPERQPAAEPDRSADPAGTYRSRGGFKLDPERHAETIGAIGRMREAEPSISADM
Ga0318497_103408441	3300031805	Soil	VGSVDLPDQPDQPDRTERARDASVARPQIREMPDPEERGRVYEAARAHVSAETAERAATSRQPDATEQGSYWDEVPKFREMWADHERRWPERQAIAERDRSADPAGTYRSQGGFKLDPERHAETIVGIGRIRETEPSISAD
Ga0318568_105074332	3300031819	Soil	VGSVDLPDQPDEPSRADRACDASTARPREIPDPDERGRAYEATRVHVCADATGQGNYWDEVPEFRQMWADHERRWPERQPAAEPDRPADPAGTYRSRGGFKLNPERHAEIIGAIGRIRETEPAISAEMQAVEKENTCGGWLAGFDRRIKDDDRLK
Ga0307473_111744331	3300031820	Hardwood Forest Soil	VDLPDQPDEPSRAERARDASAARSQMREMPDPDERGRAYEATRAHVSAETPDATEQGSYWDEVPRFREMWAGHEGRWPERQPAAEPDRSADPAGTYRSRGGFRLDPERHAETIGAIGRMRETEPSISA
Ga0318527_103401062	3300031859	Soil	VDLPDQPDESSRSERARDASAGRPQMRELPDPDERGRAYEAMRAHVSADAAEQGSYWDEVPRFRQMWADHERRWPERQPAAEPDRPADPAGTYRSRGGFRLDPERHAETIGAIGRIRET
Ga0318495_104898361	3300031860	Soil	VGSVDLPDQPDEPSRADRACDASTARPREIPDPDERGRAYEATRVHVCADATGQGNYWDEVPEFRQMWADHERRWPERQPAAEPDRPADPAGTYRSRGGFKLNPERHAEIIGAIGRIRETEPAISAEMQAVEKENTCGGWLAGFDRRIKDDDRLKE
Ga0306925_103653811	3300031890	Soil	VGSVDLPDQPDEPGRAERALDASAALPHIREMPDPEERGRVYEAARAHVSAETAERAATSRQPDATEQGSYWDEVPKFREMWADHERRWPERQAIAERDRSADPAGTYRSQGGFKLDPERHAETIVGIGRIRETEPSISADMQAVERENTCGGWLAGFDRHIKGDDRLKEKVAEQVAAEPDKSSSAILRKIP
Ga0318536_105780621	3300031893	Soil	NGRTVGSVDLPDQPDEPGRAERARDASASRPPMREMPDPDERGRAYEAVRAHVSADATGQGSYWDKVPKFRQMWADHERRWPERQPAAEPDRSADPAGTYRSRGGFKLDPERHAETIGAIGRIRETEPAISADMQAVEKENTCGGWLAGFDRRIKGDDRLKEKVAEQAAAEPDKSSSAILRKIPDAL
Ga0306923_106805511	3300031910	Soil	VGSVDLPDQPDEPSRADRACDASTARPREIPDPDERGRAYEATRVHVCADATGQGNYWDEVPEFRQMWADHERRWPERQPAAEPDRPADPAGTYRSRGGFKLNPERHAEIIGAIGRIRETEPAISAEMQAVEKENTCGGWLAGFDRRIKDDDRLKEKVAEQAAAEPDKSSSAILQK
Ga0318569_100165426	3300032010	Soil	VGSVDLPDQPDEPGRAERARDASASRPPMREMPDPDERGRAYEAVRAHVSADATGQGSYWDKVPKFRQMWADHERRWPERQPAAEPDRSADPAGTYRSRGGFKLDPERHAETIGAIGRMRETEPSISADMQAVEKENTCGGRLAG
Ga0310911_106825191	3300032035	Soil	VGSVDLPDQPDEPGRAERARDASASRPPMREMPDPDERGRAYEAVRAHVSADATGQGSYWDKVPKFRQMWADHERRWPERQPAAEPDRSADPAGTYRSRGGFKLDPERHAETIGAIGRMRETEPSISADMQAVEKENTCGGRAGQVIVRNPAEDSRRFALHVLLRAGQLRPGLSRHQGAAGGLR
Ga0318533_111261861	3300032059	Soil	VGSVDLPDQPDEPSRADRACDASTARPREIPDPDERGRAYEATRVHVCADATGQGNYWDEVPEFRQMWADHERRWPERQPAAEPDRPADPAGTYRSRGGFKLDPERHAETIGAIGRIRETEPAISADMQAVEKENK
Ga0318514_104690761	3300032066	Soil	VGSVDLPDQPDEPGRAERALDASAALPHIREMPDPEERGRVYEAARAHVSAETAERAATSRQPDATEQGSYWDEVPKFREMWADHERRWPERQAIAERDRSADPAGTYRSQGGFKLDPERHAETIVGIGRIRETEPSISADMQAVERENTCGGWLAGFDRHIKGDDRLKEKVAEQVAAEPDKSSSAILRKI
Ga0335085_101993151	3300032770	Soil	VDLPDQPDEVGRVERARDASAARPQKREIPDPDERGRAYEATRVHASADATGQGSYWDKVPRFGQMWAEHERRWPEGQPAAEPEGSADPAGTYRSRGGFKLDPERHAETIGAIGRMQETEPSISADMQ
Ga0335085_110757741	3300032770	Soil	VGSVDLPDQPDEPSRAERARDASPARPQMHEMPDPDERGRAYEATRAHVSADATDRGSYWDKVPRFRQMWADHERRWPERQPAAEPDRSDDPAGTYRSRGGFKLNPERHAETIGAIGRIRETEPSEKTGRSITRTASHEGWSMTTVRPMRPCGKTSAGWPHR
Ga0335085_121007881	3300032770	Soil	VDLPDQPDETGRAERARDFGAARPQMREMPDPDERGRAYEATRAHVSADATEHGSYWDEVPRFTQMWADHERRWPERQPAAEQDRSAAPEGTYLSRGGFKLDQERHAETIGAIGRMRETEPSISADMQAVEKENACGG
Ga0335078_115321401	3300032805	Soil	VGSLDLPDEPWHAEQADARGADRLTPRSRELPDPDERGRAYEAIQAHVSAETSEEASGGRPPDEAGQQSYWDEVPRFRDMWADHERRWPERQHAAEPDRSSDPPGTYRSKGGLKLNPEQHVEANEAIRRVRGAEQPISADMQTIGKENA
Ga0335083_103539711	3300032954	Soil	VDLPDQPDETGRAERARDFGAARPQMREMPDPDERGRAYEATRAHVSADATDQGSYWDKVPRFRQMWADHERRWPERQPAAEPDRSDDPAGTYRSRGGFKLNPERHAETIGAIGRIRETEPSEKTGRSITRTASHEGWSMTTVRPMRPCGKTSAGWPHR
Ga0335083_106138742	3300032954	Soil	VGSLDLPGQPAEPSRMERARDAGAARSQRRETPDPDERGRVYEATRAHASADAAERGSYWDEVPRFTQMWADHERRWPERRPEAEQDRSADPAGTYRSRGGFRLDPERHAETIGAIGRMRETEPSISADMQAVEKDNA
Ga0335083_109457362	3300032954	Soil	MRDMPDPDERGRAYEATRAHVSADATGQGSYWDKVPRFRQLWADHERRWPERQPAAEPDRPADPAGTYRSRSGFKLAPERHAETIGAIGRMRETEPSISADMQAVERENTCGGWLAG
Ga0335076_111138261	3300032955	Soil	VGSVDLPDQPDEPSRAERAHEASPARPQMRETPDPDERGRAYEAARVHVSADATDHGSYWDKVPRFRQMWADHERRWPERQPAAEPEGSADPVGTYRSRGGFKLNPERHAETIEAIGRMRKTEPSISADVQAVEKENTCGGWLAGFDRRIKGEDRLKEKVAEQAAAEPDKSSSAILRKTPDALRFTCCFEPDKYVRG
Ga0335076_116093031	3300032955	Soil	KFRNGRTVGSVDLPDQPDEPSRAERARDASPARPQMHEMPDPDERGRAYEATRAHVSADATDQGSYWDKVPRFRQMWADHERRWPERQPAAEPDRSDDPAGTYRSRGGFKLNPERHAETIGAIGRIRETEPSEKTGRSITRTASHEGWSMTTVRPMRPCGKTSAGWPHR
Ga0335076_117489341	3300032955	Soil	RAERARDASPARPQMREIPDPDERGRAYETARVHVSADATDQGGYWDKVPRFRQMWTDHERRWPERQPAAEPEGSADAAGTYRSRGGFKLNPERHAETIEAIGRMRETEPSISADMQAVEKENTCGGWLAGFDRRIKGEDRLKEKVAEQVAAEPDKSSSAILRKTPDALR
Ga0335077_106233541	3300033158	Soil	VGSVDLPDQPDEPGRAERARDASAARPQMREMPDPDERGRAHEAMRVHVSADATDQGSYWDKVPRFRQMWADHERRWPERQPAAEPDRSADPAGTYRSRGGFRLDPERHAETIGAIGRMRETEPSISADMQAVEKENTCGGRLAGFDRRIKGDDRLKEKVAEQAAAEPDKSSSAILR
Ga0335077_107771531	3300033158	Soil	LPDQPDEPSRAERARDASPARPQMREMPDPDERGRAYETTRAHVSTDATDQGSYWDKVPRFRQMWADHERRWPERQPAAEPDRSDDPAGTYRSRGGFKLNPERHAETIGAIGRIRETEPSEKTGRSITRTASHEGWSMTTVRPMRPCGKTSAGWPHR
Ga0310914_117544331	3300033289	Soil	VDLPDQPDEPSRAERARDASAARPREIPDPDERGRAYEATRVHVCADATGHGSYWDEIPKFRQMWADHERRWPEQQAAAEPDRAADPAGTYRSRGGFKLDPERHAETIGAIGRIRETEPAISADMQAVEKENKCGGWLAGFDRRIKDDDRLKEKVAEQATAEPDKSSSAILQKI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097968

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences