Basic Information | |
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Family ID | F097920 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 104 |
Average Sequence Length | 60 residues |
Representative Sequence | RLVIPMHYRTEAVNFLDPPDEFLAALGARVERLDESELEAEQLLGTAEDPTVALLAPPS |
Number of Associated Samples | 96 |
Number of Associated Scaffolds | 104 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 1.92 % |
% of genes near scaffold ends (potentially truncated) | 85.58 % |
% of genes from short scaffolds (< 2000 bps) | 91.35 % |
Associated GOLD sequencing projects | 88 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.58 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (68.269 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (14.423 % of family members) |
Environment Ontology (ENVO) | Unclassified (26.923 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (42.308 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 11.49% β-sheet: 10.34% Coil/Unstructured: 78.16% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.58 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 104 Family Scaffolds |
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PF00578 | AhpC-TSA | 23.08 |
PF00266 | Aminotran_5 | 12.50 |
PF13462 | Thioredoxin_4 | 8.65 |
PF01035 | DNA_binding_1 | 3.85 |
PF02566 | OsmC | 3.85 |
PF12680 | SnoaL_2 | 2.88 |
PF00313 | CSD | 2.88 |
PF00196 | GerE | 1.92 |
PF12695 | Abhydrolase_5 | 1.92 |
PF03640 | Lipoprotein_15 | 1.92 |
PF14470 | bPH_3 | 1.92 |
PF07883 | Cupin_2 | 1.92 |
PF07690 | MFS_1 | 1.92 |
PF04263 | TPK_catalytic | 0.96 |
PF00440 | TetR_N | 0.96 |
PF07681 | DoxX | 0.96 |
PF03459 | TOBE | 0.96 |
PF00970 | FAD_binding_6 | 0.96 |
PF00230 | MIP | 0.96 |
PF13189 | Cytidylate_kin2 | 0.96 |
PF00528 | BPD_transp_1 | 0.96 |
PF13668 | Ferritin_2 | 0.96 |
PF01939 | NucS | 0.96 |
PF03704 | BTAD | 0.96 |
PF01613 | Flavin_Reduct | 0.96 |
PF02574 | S-methyl_trans | 0.96 |
PF03006 | HlyIII | 0.96 |
PF00689 | Cation_ATPase_C | 0.96 |
PF13411 | MerR_1 | 0.96 |
PF01197 | Ribosomal_L31 | 0.96 |
COG ID | Name | Functional Category | % Frequency in 104 Family Scaffolds |
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COG0350 | DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase) | Replication, recombination and repair [L] | 3.85 |
COG1764 | Organic hydroperoxide reductase OsmC/OhrA | Defense mechanisms [V] | 3.85 |
COG1765 | Uncharacterized OsmC-related protein | General function prediction only [R] | 3.85 |
COG3695 | Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain | Transcription [K] | 3.85 |
COG4315 | Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown) | Function unknown [S] | 1.92 |
COG0254 | Ribosomal protein L31 | Translation, ribosomal structure and biogenesis [J] | 0.96 |
COG0474 | Magnesium-transporting ATPase (P-type) | Inorganic ion transport and metabolism [P] | 0.96 |
COG0580 | Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family) | Carbohydrate transport and metabolism [G] | 0.96 |
COG0646 | Methionine synthase I (cobalamin-dependent), methyltransferase domain | Amino acid transport and metabolism [E] | 0.96 |
COG1272 | Predicted membrane channel-forming protein YqfA, hemolysin III family | Intracellular trafficking, secretion, and vesicular transport [U] | 0.96 |
COG1637 | Endonuclease NucS, RecB family | Replication, recombination and repair [L] | 0.96 |
COG1853 | FMN reductase RutF, DIM6/NTAB family | Energy production and conversion [C] | 0.96 |
COG2040 | Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) | Amino acid transport and metabolism [E] | 0.96 |
COG2259 | Uncharacterized membrane protein YphA, DoxX/SURF4 family | Function unknown [S] | 0.96 |
COG3629 | DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain | Transcription [K] | 0.96 |
COG3947 | Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains | Transcription [K] | 0.96 |
COG4270 | Uncharacterized membrane protein | Function unknown [S] | 0.96 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 72.12 % |
Unclassified | root | N/A | 27.88 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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2124908032|Perma_A_C_ConsensusfromContig82613 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 4371 | Open in IMG/M |
3300000364|INPhiseqgaiiFebDRAFT_105042153 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 508 | Open in IMG/M |
3300000890|JGI11643J12802_10208515 | Not Available | 701 | Open in IMG/M |
3300001535|A3PFW1_10823573 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 782 | Open in IMG/M |
3300004114|Ga0062593_101594651 | All Organisms → cellular organisms → Bacteria | 708 | Open in IMG/M |
3300004463|Ga0063356_103816624 | Not Available | 649 | Open in IMG/M |
3300004479|Ga0062595_100860904 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae | 757 | Open in IMG/M |
3300005175|Ga0066673_10784534 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 545 | Open in IMG/M |
3300005294|Ga0065705_10917295 | Not Available | 571 | Open in IMG/M |
3300005406|Ga0070703_10073274 | All Organisms → cellular organisms → Archaea | 1149 | Open in IMG/M |
3300005455|Ga0070663_100158488 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1741 | Open in IMG/M |
3300005467|Ga0070706_101658976 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 583 | Open in IMG/M |
3300005471|Ga0070698_100117562 | All Organisms → cellular organisms → Bacteria | 2621 | Open in IMG/M |
3300005518|Ga0070699_101211209 | Not Available | 693 | Open in IMG/M |
3300005524|Ga0070737_10026300 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales | 3777 | Open in IMG/M |
3300005533|Ga0070734_10381112 | All Organisms → cellular organisms → Bacteria | 805 | Open in IMG/M |
3300005536|Ga0070697_101114156 | Not Available | 703 | Open in IMG/M |
3300005545|Ga0070695_100297110 | All Organisms → cellular organisms → Archaea | 1192 | Open in IMG/M |
3300005549|Ga0070704_100216896 | Not Available | 1553 | Open in IMG/M |
3300005554|Ga0066661_10487455 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei | 747 | Open in IMG/M |
3300005555|Ga0066692_10668006 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei | 647 | Open in IMG/M |
3300005569|Ga0066705_10395172 | All Organisms → cellular organisms → Bacteria | 867 | Open in IMG/M |
3300005587|Ga0066654_10470333 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales | 688 | Open in IMG/M |
3300005764|Ga0066903_101101032 | All Organisms → cellular organisms → Bacteria | 1464 | Open in IMG/M |
3300005764|Ga0066903_106466290 | All Organisms → cellular organisms → Bacteria | 611 | Open in IMG/M |
3300005885|Ga0075284_1007634 | All Organisms → cellular organisms → Bacteria | 1174 | Open in IMG/M |
3300005891|Ga0075283_1122307 | All Organisms → cellular organisms → Bacteria | 500 | Open in IMG/M |
3300006034|Ga0066656_10560629 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 742 | Open in IMG/M |
3300006046|Ga0066652_100328313 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes | 1369 | Open in IMG/M |
3300006046|Ga0066652_101900806 | All Organisms → cellular organisms → Bacteria | 534 | Open in IMG/M |
3300006173|Ga0070716_100439814 | All Organisms → cellular organisms → Bacteria | 948 | Open in IMG/M |
3300006175|Ga0070712_100037655 | All Organisms → cellular organisms → Bacteria | 3299 | Open in IMG/M |
3300006175|Ga0070712_101365305 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 618 | Open in IMG/M |
3300006638|Ga0075522_10549598 | All Organisms → cellular organisms → Bacteria | 530 | Open in IMG/M |
3300006797|Ga0066659_10923317 | Not Available | 729 | Open in IMG/M |
3300006797|Ga0066659_11689669 | Not Available | 534 | Open in IMG/M |
3300006852|Ga0075433_10307467 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1403 | Open in IMG/M |
3300006904|Ga0075424_100971600 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 906 | Open in IMG/M |
3300009098|Ga0105245_10270088 | Not Available | 1658 | Open in IMG/M |
3300009101|Ga0105247_10650867 | Not Available | 787 | Open in IMG/M |
3300009156|Ga0111538_11298101 | All Organisms → cellular organisms → Bacteria | 919 | Open in IMG/M |
3300009156|Ga0111538_13568022 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 539 | Open in IMG/M |
3300009545|Ga0105237_12304057 | All Organisms → cellular organisms → Bacteria | 548 | Open in IMG/M |
3300009660|Ga0105854_1074551 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales | 1043 | Open in IMG/M |
3300010301|Ga0134070_10361724 | Not Available | 565 | Open in IMG/M |
3300010303|Ga0134082_10489366 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium | 535 | Open in IMG/M |
3300010335|Ga0134063_10584638 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 567 | Open in IMG/M |
3300010396|Ga0134126_12621272 | Not Available | 547 | Open in IMG/M |
3300010399|Ga0134127_10907740 | All Organisms → cellular organisms → Bacteria | 936 | Open in IMG/M |
3300011999|Ga0120148_1069574 | All Organisms → cellular organisms → Bacteria | 695 | Open in IMG/M |
3300012199|Ga0137383_10369753 | Not Available | 1050 | Open in IMG/M |
3300012351|Ga0137386_10409486 | All Organisms → cellular organisms → Archaea | 976 | Open in IMG/M |
3300012359|Ga0137385_10997233 | Not Available | 691 | Open in IMG/M |
3300012361|Ga0137360_10909263 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → Marmoricola pocheonensis | 759 | Open in IMG/M |
3300012362|Ga0137361_10302303 | All Organisms → cellular organisms → Bacteria | 1464 | Open in IMG/M |
3300012929|Ga0137404_10191007 | Not Available | 1730 | Open in IMG/M |
3300012929|Ga0137404_10391489 | All Organisms → cellular organisms → Archaea | 1224 | Open in IMG/M |
3300012929|Ga0137404_10780665 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 867 | Open in IMG/M |
3300012958|Ga0164299_11115756 | Not Available | 590 | Open in IMG/M |
3300012958|Ga0164299_11651037 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 507 | Open in IMG/M |
3300012976|Ga0134076_10517887 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 547 | Open in IMG/M |
3300012982|Ga0168317_1044008 | Not Available | 1148 | Open in IMG/M |
3300013306|Ga0163162_11373062 | Not Available | 804 | Open in IMG/M |
3300014326|Ga0157380_11888320 | All Organisms → cellular organisms → Bacteria | 658 | Open in IMG/M |
3300015242|Ga0137412_11178870 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 539 | Open in IMG/M |
3300015264|Ga0137403_10499917 | Not Available | 1087 | Open in IMG/M |
3300017659|Ga0134083_10345271 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 640 | Open in IMG/M |
3300018027|Ga0184605_10507653 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 524 | Open in IMG/M |
3300018061|Ga0184619_10006547 | All Organisms → cellular organisms → Bacteria | 4423 | Open in IMG/M |
3300018468|Ga0066662_11413911 | Not Available | 720 | Open in IMG/M |
3300018469|Ga0190270_11178027 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 803 | Open in IMG/M |
3300019356|Ga0173481_10448905 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 644 | Open in IMG/M |
3300019869|Ga0193705_1091724 | Not Available | 568 | Open in IMG/M |
3300020001|Ga0193731_1099414 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales | 750 | Open in IMG/M |
3300020081|Ga0206354_10456291 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1197 | Open in IMG/M |
3300020150|Ga0187768_1129466 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 580 | Open in IMG/M |
3300021344|Ga0193719_10025201 | All Organisms → cellular organisms → Bacteria | 2553 | Open in IMG/M |
3300022756|Ga0222622_10350723 | Not Available | 1028 | Open in IMG/M |
3300025862|Ga0209483_1368549 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 522 | Open in IMG/M |
3300025885|Ga0207653_10011240 | All Organisms → cellular organisms → Bacteria | 2795 | Open in IMG/M |
3300025888|Ga0209540_10245528 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1041 | Open in IMG/M |
3300025910|Ga0207684_10207877 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1688 | Open in IMG/M |
3300025913|Ga0207695_10805727 | Not Available | 819 | Open in IMG/M |
3300025915|Ga0207693_10924706 | Not Available | 668 | Open in IMG/M |
3300025916|Ga0207663_11456101 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 551 | Open in IMG/M |
3300025934|Ga0207686_10426819 | Not Available | 1015 | Open in IMG/M |
3300025939|Ga0207665_10610248 | All Organisms → cellular organisms → Bacteria | 852 | Open in IMG/M |
3300025986|Ga0207658_11018555 | Not Available | 756 | Open in IMG/M |
3300025998|Ga0208651_1022834 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 547 | Open in IMG/M |
3300026009|Ga0208530_1005259 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 910 | Open in IMG/M |
3300026973|Ga0207479_100585 | Not Available | 1305 | Open in IMG/M |
3300027706|Ga0209581_1021961 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales | 3230 | Open in IMG/M |
3300028563|Ga0265319_1268292 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 519 | Open in IMG/M |
3300028577|Ga0265318_10031802 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 2044 | Open in IMG/M |
3300028707|Ga0307291_1163708 | Not Available | 569 | Open in IMG/M |
3300028807|Ga0307305_10189738 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 946 | Open in IMG/M |
3300028812|Ga0247825_11464239 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 501 | Open in IMG/M |
3300028884|Ga0307308_10072869 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1623 | Open in IMG/M |
3300031152|Ga0307501_10282980 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 505 | Open in IMG/M |
3300032013|Ga0310906_10622495 | Not Available | 746 | Open in IMG/M |
3300032017|Ga0310899_10730791 | All Organisms → cellular organisms → Bacteria | 505 | Open in IMG/M |
3300032179|Ga0310889_10466646 | All Organisms → cellular organisms → Bacteria | 636 | Open in IMG/M |
3300032954|Ga0335083_10714459 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 812 | Open in IMG/M |
3300034817|Ga0373948_0011017 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1590 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 14.42% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 10.58% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 10.58% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 9.62% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 4.81% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 3.85% |
Rice Paddy Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil | 3.85% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 3.85% |
Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 2.88% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 2.88% |
Arctic Peat Soil | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil | 2.88% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 1.92% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.92% |
Permafrost | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost | 1.92% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 1.92% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.92% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 1.92% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere | 1.92% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.96% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.96% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 0.96% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil | 0.96% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 0.96% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 0.96% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 0.96% |
Permafrost Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil | 0.96% |
Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 0.96% |
Weathered Mine Tailings | Environmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings | 0.96% |
Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 0.96% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.96% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.96% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.96% |
Rhizosphere Soil | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil | 0.96% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 0.96% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 0.96% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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2124908032 | Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all | Environmental | Open in IMG/M |
3300000364 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
3300000890 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
3300001535 | Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina | Environmental | Open in IMG/M |
3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
3300005175 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 | Environmental | Open in IMG/M |
3300005294 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil | Environmental | Open in IMG/M |
3300005406 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG | Environmental | Open in IMG/M |
3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Host-Associated | Open in IMG/M |
3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Environmental | Open in IMG/M |
3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Environmental | Open in IMG/M |
3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Environmental | Open in IMG/M |
3300005524 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1 | Environmental | Open in IMG/M |
3300005533 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 | Environmental | Open in IMG/M |
3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Environmental | Open in IMG/M |
3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Environmental | Open in IMG/M |
3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Environmental | Open in IMG/M |
3300005554 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 | Environmental | Open in IMG/M |
3300005555 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 | Environmental | Open in IMG/M |
3300005569 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 | Environmental | Open in IMG/M |
3300005587 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 | Environmental | Open in IMG/M |
3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
3300005885 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_401 | Environmental | Open in IMG/M |
3300005891 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_304 | Environmental | Open in IMG/M |
3300006034 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105 | Environmental | Open in IMG/M |
3300006046 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101 | Environmental | Open in IMG/M |
3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Environmental | Open in IMG/M |
3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
3300006638 | Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A | Environmental | Open in IMG/M |
3300006797 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108 | Environmental | Open in IMG/M |
3300006852 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Host-Associated | Open in IMG/M |
3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Host-Associated | Open in IMG/M |
3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Host-Associated | Open in IMG/M |
3300009660 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058 | Environmental | Open in IMG/M |
3300010301 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015 | Environmental | Open in IMG/M |
3300010303 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015 | Environmental | Open in IMG/M |
3300010335 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015 | Environmental | Open in IMG/M |
3300010396 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2 | Environmental | Open in IMG/M |
3300010399 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3 | Environmental | Open in IMG/M |
3300011999 | Permafrost microbial communities from Nunavut, Canada - A28_65cm_6M | Environmental | Open in IMG/M |
3300012199 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG | Environmental | Open in IMG/M |
3300012351 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG | Environmental | Open in IMG/M |
3300012359 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG | Environmental | Open in IMG/M |
3300012361 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG | Environmental | Open in IMG/M |
3300012362 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG | Environmental | Open in IMG/M |
3300012929 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012958 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG | Environmental | Open in IMG/M |
3300012976 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG | Environmental | Open in IMG/M |
3300012982 | Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCWfield | Environmental | Open in IMG/M |
3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
3300015242 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
3300015264 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
3300017659 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG | Environmental | Open in IMG/M |
3300018027 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex | Environmental | Open in IMG/M |
3300018061 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1 | Environmental | Open in IMG/M |
3300018468 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111 | Environmental | Open in IMG/M |
3300018469 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T | Environmental | Open in IMG/M |
3300019356 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2) | Environmental | Open in IMG/M |
3300019869 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2 | Environmental | Open in IMG/M |
3300020001 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2 | Environmental | Open in IMG/M |
3300020081 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300020150 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG | Environmental | Open in IMG/M |
3300021344 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2 | Environmental | Open in IMG/M |
3300022756 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1 | Environmental | Open in IMG/M |
3300025862 | Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes) | Environmental | Open in IMG/M |
3300025885 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025888 | Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes) | Environmental | Open in IMG/M |
3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025998 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_204 (SPAdes) | Environmental | Open in IMG/M |
3300026009 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_401 (SPAdes) | Environmental | Open in IMG/M |
3300026973 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-BECK01-C (SPAdes) | Environmental | Open in IMG/M |
3300027706 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes) | Environmental | Open in IMG/M |
3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Host-Associated | Open in IMG/M |
3300028577 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG | Host-Associated | Open in IMG/M |
3300028707 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148 | Environmental | Open in IMG/M |
3300028807 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186 | Environmental | Open in IMG/M |
3300028812 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48 | Environmental | Open in IMG/M |
3300028884 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195 | Environmental | Open in IMG/M |
3300031152 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S | Environmental | Open in IMG/M |
3300032013 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3 | Environmental | Open in IMG/M |
3300032017 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4 | Environmental | Open in IMG/M |
3300032179 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2 | Environmental | Open in IMG/M |
3300032954 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2 | Environmental | Open in IMG/M |
3300034817 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 | Host-Associated | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
Perma_A_C_02515810 | 2124908032 | Soil | MHYGTSAVNFLEPPDAFLDALGARVERLDGSSLETEQLLGTADQPTVALLAAPASS |
INPhiseqgaiiFebDRAFT_1050421531 | 3300000364 | Soil | MHYRTDAVNFXDPPESFLAALGXRVERIERNELEAEEFLGTADEPVVAMLGAPRAS* |
JGI11643J12802_102085152 | 3300000890 | Soil | MHYRTEAVNFLDPPDEFLAALGARVERLDESELEAEQLFGTAEDPTVALLAPPS* |
A3PFW1_108235732 | 3300001535 | Permafrost | RLVVAMHYRTDAVNFLDPPDAFLEAYGARVEQVETSETDVEQLLGSREEPVVALLAPPTASS* |
Ga0062593_1015946512 | 3300004114 | Soil | AVNFLDPPDEFLAALGARVVRLDDSELDAESLLGTAEEPTVAVLAPPTS* |
Ga0063356_1038166242 | 3300004463 | Arabidopsis Thaliana Rhizosphere | PMHYRTEAVNFLDPPDEFLAALGARVERLNESELEVEQLLGTPEDPTVALLAPPS* |
Ga0062595_1008609041 | 3300004479 | Soil | RTDAVNFLDPLDSFLAALGARVERIEKNELEAEEFLGTADEPAVAMLGVPTAPSSRQGGG |
Ga0066673_107845342 | 3300005175 | Soil | IPMHYRTEAVNFLDPPGEFLAALGARVERVPENELEVERFLGSIDDPTVALLAPPASS* |
Ga0065705_109172952 | 3300005294 | Switchgrass Rhizosphere | VNFLDPPDEFLAALGARVDRLDESEVEVEQLLGTAEDPTVALLAPPS* |
Ga0070703_100732743 | 3300005406 | Corn, Switchgrass And Miscanthus Rhizosphere | VNFLDPPDEFLAALGARVERLNECELEVEQLLGTPEDPTVALLAPPS* |
Ga0070663_1001584881 | 3300005455 | Corn Rhizosphere | LRPRLVVPMHYRTEAVNFLEPPDEFLAALGARVERVDDSELEAGVLLGTADDPTVALLAPPKS* |
Ga0070706_1016589762 | 3300005467 | Corn, Switchgrass And Miscanthus Rhizosphere | RLVVPMHYRTEAVNFLDPPHEFLAALGARAERFDESELEAEEFLGTAEDPTVALLAPPSS |
Ga0070698_1001175622 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | MHYRTAAVNFLEPPDAFFDALGVRVERLDQNEVEPEHFLGTADQPTVTLLAVPT* |
Ga0070699_1012112092 | 3300005518 | Corn, Switchgrass And Miscanthus Rhizosphere | RLVVPMHYRTEAVNFLDPPDEFLAALGARVERLNESELEVEQLLGTAEDPTVALVAPPS* |
Ga0070737_100263003 | 3300005524 | Surface Soil | MHYRTEAVNFLEPPDAFLSAFGVPVERLAEDEAEVEPLLGSRREPRVALLAARRPG* |
Ga0070734_103811121 | 3300005533 | Surface Soil | VAAAATRALSPRLVIPMHYRTEAISFLSPPDEFLDALGAPVERLDSSEAEIDGHLGTAGDPRVVLFAAPLAAG* |
Ga0070697_1011141562 | 3300005536 | Corn, Switchgrass And Miscanthus Rhizosphere | RTEAVNFLDPPDEFLAALGARVERLNESELEVEQLLGTAEDPTVALVAPPS* |
Ga0070695_1002971103 | 3300005545 | Corn, Switchgrass And Miscanthus Rhizosphere | MHYGTEAVNFLDPPDEFLAALGARVERLNECELEVEQLLGTPEDPTVALLAPPS* |
Ga0070704_1002168964 | 3300005549 | Corn, Switchgrass And Miscanthus Rhizosphere | LVIPMHYGTEAVNFLDPPDEFLAALGARVERLNECELEVEQLLGTPEDPTVALLAPPS* |
Ga0066661_104874552 | 3300005554 | Soil | ALRPRLVVPMHYRTDAVNFLDPPDEFLDALGARVERVGENELEAEQFLGTADDPIVALLAPPLPE* |
Ga0066692_106680062 | 3300005555 | Soil | LVIPMHYRTDAVNFLDPPDTFLAALGAPVERIAESELQTEQLLGTKDEPSVALLAAPGAPIG* |
Ga0066705_103951722 | 3300005569 | Soil | SAAAIVSALRPRLVVPMHYRSEAVDFLDPPDEFLAALGARVERVDKSELEAEQFLGTADDPTVALLTPPASSQ* |
Ga0066654_104703332 | 3300005587 | Soil | GEPAAAIVRALRPRLVVPMHYRTDAVNFLDPPDEFLDALGARVERVGENELEAEQFLGTADDPTVALLAPPLPE* |
Ga0066903_1011010321 | 3300005764 | Tropical Forest Soil | PRLVAPMHYRTPLVNFLEPPDEFLDALGARVERVETSEVVAEDLLGSRDDPTVVLLAPPGA* |
Ga0066903_1064662901 | 3300005764 | Tropical Forest Soil | PRLVVPMHYRTPLVNFLEPPDEFLDALGARVERVEASEVVAEELLGSREDPTVLLLAPPGA* |
Ga0075284_10076341 | 3300005885 | Rice Paddy Soil | LVVPMHYRTGAVNFLEPPDVFLEALGARVERLETSETEVEALLGTAAEPVVALLAPPV* |
Ga0075283_11223072 | 3300005891 | Rice Paddy Soil | VVPMHYRTGAVNFLEPPDVFLEALGARVERLETSETEVEALLGTAAEPVVALLAPPV* |
Ga0066656_105606291 | 3300006034 | Soil | VRALRPRLVIPMHYRTDAVNFLDPPDEFLEALGARVERVTESELEAERLLGSSDDPTVALLAPPASN* |
Ga0066652_1003283132 | 3300006046 | Soil | VNFLDPPDEFLAALGARVERVPENELEVERFLGSIDDPTVALLAPPASS* |
Ga0066652_1019008062 | 3300006046 | Soil | TEAVNFLELPDAFLDALGARVERIPESEFEPEQLLGTADEPTVALLSAPIERSSTR* |
Ga0070716_1004398141 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | PMHYGTEAVNFLDPPDEFLAALGARVERLNESELEVEQLLGTAEDPTVALLAPPS* |
Ga0070712_1000376551 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | VNFLEPPDEFLAALGARVERVDDSELEAGVLLGTADDPTVALLAPPKS* |
Ga0070712_1013653052 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | RLVVTMHYRTDAVDFLDPPDDFLDALGARVERLDESELEVEQFLGTSDEPTVALLAAPAPS* |
Ga0075522_105495981 | 3300006638 | Arctic Peat Soil | LRPRLVVPMHYGTEAVNFLDPPDAFLETLGARVERIAANEFEAKQFLGTTDQPTVALLAIPTSH* |
Ga0066659_109233172 | 3300006797 | Soil | EAVNFLDLPDEFLAALGARVERLDESELEVEQLLGTAEDPTVALLAPPS* |
Ga0066659_116896692 | 3300006797 | Soil | FLDPPDAFLDALGARVERLEVNELDVEPFLGTADKPTVTLLAAPAGPANGP* |
Ga0075433_103074671 | 3300006852 | Populus Rhizosphere | RLVVPMHYRTEAVNFLEPPDEFLAALGARVERVDGSELEAEAFLGTADDPTVALLAPPKS |
Ga0075424_1009716001 | 3300006904 | Populus Rhizosphere | PMHYRTPLVNFLDPPDEFLDALGARVIRLEQSEAEADALLGSRDEPTVALLAAPGA* |
Ga0105245_102700884 | 3300009098 | Miscanthus Rhizosphere | VNFLDPPDEFLAALGARVERLNESELEVEQLLGTYEDPTVALLAPPS* |
Ga0105247_106508671 | 3300009101 | Switchgrass Rhizosphere | AAAIVRALRPRLVIPMHYRTEAVNFLDPPDEFLAALGARVERLNESELEVEQLLGTAEDPTVALVAPPS* |
Ga0111538_112981012 | 3300009156 | Populus Rhizosphere | ELRPRLVVPMHYRTEAVNFLEPPDEFLAALGARVEKVDDSELEAEAFLGTADDPTVALLAPPKS* |
Ga0111538_135680222 | 3300009156 | Populus Rhizosphere | VGGESAAAIVRALRPRLVVPMHHRTEAVNFLDPPDEFLAALGARVVRLDDSELDAESLLGTAEEPTVAVLAPPTS* |
Ga0105237_123040572 | 3300009545 | Corn Rhizosphere | FLEPPDEFLAALGARVERVDDSELEAEAFLGTADDPTVALLAPPKA* |
Ga0105854_10745513 | 3300009660 | Permafrost Soil | AAAVVRLLRPRLVVPHHYRTAAISFLEPPDAFLDALGARVERLDEPELVVDQYLGTPEEPIIALLDFPRQGA* |
Ga0134070_103617241 | 3300010301 | Grasslands Soil | ESAAAIVRALRPRLVIPMHYRTEAVNFLDPPDEFLAALGSRVERLDESELEAERFLGTAEDPTVALLAPPS* |
Ga0134082_104893662 | 3300010303 | Grasslands Soil | GAVNFLEPPDAFLDALGARVERIPESEFEPEQLLGTADEPTVALLSAPIERSSTR* |
Ga0134063_105846382 | 3300010335 | Grasslands Soil | YRTDAVNFLDPPDEFLDALGARVERVGENELEAEQFLGTADDPIVALLAPPLPE* |
Ga0134126_126212722 | 3300010396 | Terrestrial Soil | AIVRALRPRLVIPMHYRTEAVNFLDPPDEFLAALGARVERLNESELEVEQLLGTAEDPTVALVAPPS* |
Ga0134127_109077402 | 3300010399 | Terrestrial Soil | AAAIVRALRPRLVVPMHYRTEAVNFLEPPDEFLAALGARVERVDESELEAEAFLGTADDPTVALLAPPKS* |
Ga0120148_10695741 | 3300011999 | Permafrost | RALRPRLVVPMHYRTDAVNFLEPPDAFLDALGARVETLAKNELDAEQFLGTAEQPTVVLLAVPA* |
Ga0137383_103697531 | 3300012199 | Vadose Zone Soil | AIVRALRPRLVIPMHYRTEAVNFLDPPDEFLAALGSRVEPLDESELEAERFLGTAEDPTVALLAPPS* |
Ga0137386_104094861 | 3300012351 | Vadose Zone Soil | VNFLDPPDEFLAALGSRVEPLDESELEAERFLGTAEDPTVALLAPPS* |
Ga0137385_109972331 | 3300012359 | Vadose Zone Soil | AAAIVRALRPRLVIPMHYRTEAVNFLDPPDEFLAALGSRVERLDESELEAERCLGTAEDPTVALLARPS* |
Ga0137360_109092631 | 3300012361 | Vadose Zone Soil | ALQPRLVVPMHYRTDAVNFLEPPDAFLDALGGRVEKLAESELIAEQLLGTADERTVALPAAPIAS* |
Ga0137361_103023033 | 3300012362 | Vadose Zone Soil | VRALRPRLVVPMHYGTEAVNFLDPPDDFLEALGAHVARIAANEFEAERFLGTAEQPTVLLLAIPTSH* |
Ga0137404_101910071 | 3300012929 | Vadose Zone Soil | DAVNFLDPPDAFLDALGARVERVAESEFVAEQFLGTDDEPTIVLLGVPASS* |
Ga0137404_103914893 | 3300012929 | Vadose Zone Soil | SAAAIVRALRPRLVIPMHYRTQAVNFLDLPDEFLAALGARVERLDESELEVEQLLGTAEDPTVALLAPPS* |
Ga0137404_107806652 | 3300012929 | Vadose Zone Soil | RPRLVVPMHYRTDAVNFLDPPDAFLDALDARVERLEENELDVEPFLGTADEPTVTLLAAPAGPANGS* |
Ga0164299_111157562 | 3300012958 | Soil | PMHYPTPAIGFLDPPDAFLAALGARVERLESREAEVEPLMGSREEPVVALLAPPV* |
Ga0164299_116510371 | 3300012958 | Soil | MHYRTDAVNFLDPPESFLAALGARVERIERNELKAEEFLGTADEPAVAMLRVPMAPSSRQADPGGG* |
Ga0134076_105178871 | 3300012976 | Grasslands Soil | TTGGAPAAAVVRALRPRLVVPMHFRTEAVNFLELPDAFLDALGARVARIPESELEPEQILGAADEPTVALLSAPIERSSTR* |
Ga0168317_10440082 | 3300012982 | Weathered Mine Tailings | AVAPRLVVPMHYRTPAVNFLDEPEAFLAALGAHVVRVPASHIDANELLGTREAPTVALLAPPA* |
Ga0163162_113730621 | 3300013306 | Switchgrass Rhizosphere | RPRLVIPMHYRTEAVNFLDPPDEFLAALGARVERLDESELEVEQLLGTAQDPTVALLAPPS* |
Ga0157380_118883202 | 3300014326 | Switchgrass Rhizosphere | RLVVPMHYRTEAVNFLEPPDEFLSALGARLERVDDSELEAGALLGTADDPTVALLAPPKS |
Ga0137412_111788701 | 3300015242 | Vadose Zone Soil | MHYRTDAVNFLDPPDAFLDALGGRVEKLAESELTAEQLLGTADEPTVALPAAPIAS* |
Ga0137403_104999171 | 3300015264 | Vadose Zone Soil | RLVIPMHYRTDAVNFLDPPDAFLDALGARVERVAESEFVAEQFLGTDDEPTIVLLGVPASS* |
Ga0134083_103452712 | 3300017659 | Grasslands Soil | AAAIVRALRPRLVVPMHYRTDAVNFLDPPDEFLDALGARVERVGENELEAEQFLGTADDPIVALLAPPLPE |
Ga0184605_105076532 | 3300018027 | Groundwater Sediment | PRLVVPMHYRTDAVDFLDSPDGFLAALGARIERVAESELEAERFLGTADEPTVALLAAPVSS |
Ga0184619_100065475 | 3300018061 | Groundwater Sediment | MHYRTDAVDFLDPPDAFLAALGARIERVAESELEAERFLGTADEPTVALLAAPVSS |
Ga0066662_114139112 | 3300018468 | Grasslands Soil | AAIVRSLRPRLVIAMHYRTGAVNFLDPPDAFLDALDAPVEHSRESEVEAEPLLGAADRPTVALLAPPLPTERA |
Ga0190270_111780271 | 3300018469 | Soil | RLVVPMHFRTPAVNFLEPPDAFLDAMGARVKTLDASEARAADLLGSAADPTVVLFAVPS |
Ga0173481_104489052 | 3300019356 | Soil | MHYRTEAVNFLDPPDEFLAALGARVERLDESELEAEQLFGTAEDPTVALLAPPS |
Ga0193705_10917241 | 3300019869 | Soil | RTEAVNFLDPPDEFLAALGARVERLNESELEVEQLLGTPEDPTVALLAPPS |
Ga0193731_10994141 | 3300020001 | Soil | EPAAAIVRALRPRLVVPMHYRTDAVDFLDPPDAFLAALGARIERVAESELEAERFLGTADEPTVALLAAPVSS |
Ga0206354_104562913 | 3300020081 | Corn, Switchgrass And Miscanthus Rhizosphere | AAAIVRTLRPGLVVPMHYRTDAVNFLDPPDAFLDAVGARIETLGESDFVAEQLLGTVGDPTVVLLAAPTSS |
Ga0187768_11294661 | 3300020150 | Tropical Peatland | LVVPMHYRTPALGFLDPPDEFLDALGARIERLESSEAEVEGLLGTKEAPTVALLAPPAG |
Ga0193719_100252011 | 3300021344 | Soil | MHYRTDAVDSLDFPDAFLAALGARIERVAESELEAERFLGTAGEPTVALLAAPASS |
Ga0222622_103507233 | 3300022756 | Groundwater Sediment | SRPRLVIPMHYRTEAVNFLDPPDEFLAALGARLERLNESELEVEQLLGTPEDPTVALLAPPS |
Ga0209483_13685492 | 3300025862 | Arctic Peat Soil | RLVVPMHYGTEAVNFLDPPDAFLETLGARVERIAANEFEAKQFLGTTDQPTVALLAIPTS |
Ga0207653_100112405 | 3300025885 | Corn, Switchgrass And Miscanthus Rhizosphere | TEAVNFLDPPDEFLAALGARVERLNESELEVEQLLGTPEDPTVALLAPPS |
Ga0209540_102455282 | 3300025888 | Arctic Peat Soil | AIVRALRPRLVVPMHYRTDAVNFLEPPDAFLDALGARVERVDENELEAEQFLGTADQPTVALLAVPAGS |
Ga0207684_102078771 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | MHYRTDAVNFLDPPESFLAALGAHVERIERNELEAEEFLGTADEPAVAMLGVPTAPTSRQGDPGGR |
Ga0207695_108057273 | 3300025913 | Corn Rhizosphere | VVPMHYRTEAVNFLDPPDEFLAALGARVERLNESELEVEQLLGTYEDPTVALLAPPS |
Ga0207693_109247061 | 3300025915 | Corn, Switchgrass And Miscanthus Rhizosphere | VPMHYRTDAVNFLEPPDAFLEALGARVETLAESELDVEQLFGTADQPTVALPAAPAAR |
Ga0207663_114561012 | 3300025916 | Corn, Switchgrass And Miscanthus Rhizosphere | PMHYRTDAVNFLEPPDAFLAALGARAERLETSEATVEDLLGTAAAPVVALLAPPI |
Ga0207686_104268191 | 3300025934 | Miscanthus Rhizosphere | RPRLVIPMHYGTEAVNFLDPPDEFLAALGARVERLNESELEVEQLLGTPEDPTVALLAPP |
Ga0207665_106102481 | 3300025939 | Corn, Switchgrass And Miscanthus Rhizosphere | RLVIPMHYRTEAVNFLDPPDEFLAALGARVERLNESELEVEQLLGTPEDPTVALLAPPS |
Ga0207658_110185551 | 3300025986 | Switchgrass Rhizosphere | KHIAAIVRALRPRLVIPMHYRTEAVNFLDPPDEFLAALGARVERLNESELEVEQLLGTPEDPTVALLAPPS |
Ga0208651_10228341 | 3300025998 | Rice Paddy Soil | DLVRELAPRLVVPMHYRTGAVNFLEPPDVFLEALGARVERLETSETEVEALLGTAAEPVVALLAPPV |
Ga0208530_10052593 | 3300026009 | Rice Paddy Soil | LVVPMHYRTGAVNFLEPPDVFLEALGARVERLETSETEVEALLGTAAEPVVALLAPPV |
Ga0207479_1005853 | 3300026973 | Soil | RLVIPMHYRTEAVNFLDPPDEFLAALGARVERLDESELEAEQLLGTAEDPTVALLAPPS |
Ga0209581_10219615 | 3300027706 | Surface Soil | MHYRTEAVNFLEPPDAFLSAFGVPVERLAEDEAEVEPLLGSRREPRVALLAARRPG |
Ga0265319_12682921 | 3300028563 | Rhizosphere | RTDAVNFLDPPDAFLDALGARVERLDASELEAEDFLGTADQPTVVLLAVPAAS |
Ga0265318_100318021 | 3300028577 | Rhizosphere | PRLVVPMHYRTDAVNFLDPPDAFLDALGARVERLDASELEAEDFLGTADQPTVVLLAVPAAS |
Ga0307291_11637082 | 3300028707 | Soil | LRPRLVIPMHYRTEAVNFLDPPDEFLAALGARVERLNESELEVEQLLGTPEDPTVALLAPPS |
Ga0307305_101897383 | 3300028807 | Soil | YRTDAVDFLDPPDAFLAALGARIERVAESELEAERFLGTADDPTVALLAAPVSS |
Ga0247825_114642391 | 3300028812 | Soil | FRTPAVNFLEPPDDFLEALGARVETLETSEARAADLLGTAADPTVVLFAVPS |
Ga0307308_100728693 | 3300028884 | Soil | VGGEPAAAIVRALRPRLVVPMHYRTDAVDFLDSPDGFLAALGARIERVAESELEAERFLGTADDPTVALLAAPVSS |
Ga0307501_102829801 | 3300031152 | Soil | VPMHYRTDAVNFLDPPDAFLDDLGARVEKLSESELVAEQLLGAPGEPTVALPAAPSI |
Ga0310906_106224951 | 3300032013 | Soil | VIPMHYRTEAVNFLDPPDEFLAALGARVERLNESELEVEQLLGTAEDPTVALLAPPS |
Ga0310899_107307912 | 3300032017 | Soil | IVRALRPRLVVPMHYRTDAVNFLEPPDEFLAALGARVQRVDDSELEAEAFLGTADDPTVALLAPPKS |
Ga0310889_104666461 | 3300032179 | Soil | AVNFLEPPDEFLAALGARVERVDDSELEAEAFLGTADDPTVALLAPPKN |
Ga0335083_107144591 | 3300032954 | Soil | HYRTEAINFLDPPDAFLDALGARVERVAAAEVEVEPLLGSRDEPVVVLLAPPLR |
Ga0373948_0011017_1378_1545 | 3300034817 | Rhizosphere Soil | MHYRTEAVNFLEPPDEFLAALGARVERVDDSELEAEAFLGTADDPTVALLAPPKN |
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