Metagenome / Metatranscriptome Family F097908

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097908
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	145 residues
Representative Sequence	MRRVLLVSAVALAMCAGNAATAKTVSISFDGLCDGLDIIVNKDTRTALETGNGCDEGAHFGAGTIGRIKNTGNAITFGVNLYAKGGGAYQYIYVISYPLVTGATWSNFYTTDGKTLSKQFTGTYTVNGGARHRTKGLRSSTDRPQ
Number of Associated Samples	79
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	64.42 %
% of genes near scaffold ends (potentially truncated)	39.42 %
% of genes from short scaffolds (< 2000 bps)	74.04 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.923 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere (16.346 % of family members)
Environment Ontology (ENVO)	Unclassified (49.038 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (62.500 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 10.40% β-sheet: 38.15% Coil/Unstructured: 51.45%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF03600	CitMHS	5.77
PF13417	GST_N_3	4.81
PF01029	NusB	2.88
PF00990	GGDEF	2.88
PF14497	GST_C_3	1.92
PF00925	GTP_cyclohydro2	1.92
PF00106	adh_short	0.96
PF06210	DUF1003	0.96
PF04101	Glyco_tran_28_C	0.96
PF03551	PadR	0.96
PF00174	Oxidored_molyb	0.96
PF04577	Glyco_transf_61	0.96
PF13360	PQQ_2	0.96
PF02129	Peptidase_S15	0.96
PF08299	Bac_DnaA_C	0.96
PF02803	Thiolase_C	0.96
PF00939	Na_sulph_symp	0.96
PF08448	PAS_4	0.96
PF00885	DMRL_synthase	0.96
PF01757	Acyl_transf_3	0.96
PF03741	TerC	0.96
PF05036	SPOR	0.96
PF06532	NrsF	0.96
PF14525	AraC_binding_2	0.96
PF00254	FKBP_C	0.96
PF10431	ClpB_D2-small	0.96
PF00884	Sulfatase	0.96
PF03109	ABC1	0.96
PF03009	GDPD	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0807	GTP cyclohydrolase II	Coenzyme transport and metabolism [H]	1.92
COG0054	6,7-dimethyl-8-ribityllumazine synthase (Riboflavin synthase beta chain)	Coenzyme transport and metabolism [H]	0.96
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.96
COG0471	Di- and tricarboxylate antiporter	Carbohydrate transport and metabolism [G]	0.96
COG0584	Glycerophosphoryl diester phosphodiesterase	Lipid transport and metabolism [I]	0.96
COG0593	Chromosomal replication initiation ATPase DnaA	Replication, recombination and repair [L]	0.96
COG0661	Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family	Signal transduction mechanisms [T]	0.96
COG0861	Tellurite resistance membrane protein TerC	Inorganic ion transport and metabolism [P]	0.96
COG1055	Na+/H+ antiporter NhaD or related arsenite permease	Inorganic ion transport and metabolism [P]	0.96
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.96
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.96
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.96
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.96
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.96
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.96
COG4944	Uncharacterized conserved protein	Function unknown [S]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.92 %
Unclassified	root	N/A	48.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.92 %
Unclassified	root	N/A	48.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.92 %
Unclassified	root	N/A	48.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.65 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.96 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.96 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.08 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18.27 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.96 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.08 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.92 %
Micropepsales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales	0.96 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.96 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.96 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.96 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.96 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %
Gloeobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria	0.96 %
Micropepsaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae	0.96 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.96 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.96 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.96 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.96 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %
Gloeobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria → Gloeobacterales	0.96 %
Rhizomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium	0.96 %
Janthinobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium	0.96 %
Amaricoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Amaricoccus	0.96 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.96 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.96 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %
unclassified Janthinobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium → unclassified Janthinobacterium	0.96 %
Pseudomonas arcuscaelestis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas arcuscaelestis	0.96 %
Mesorhizobium muleiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium muleiense	0.96 %
Gloeobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria → Gloeobacterales → Gloeobacteraceae	0.96 %
unclassified Amaricoccus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Amaricoccus → unclassified Amaricoccus	0.96 %
Rhizomicrobium palustre	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium → Rhizomicrobium palustre	0.96 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %
Janthinobacterium sp. 551a	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium → unclassified Janthinobacterium → Janthinobacterium sp. 551a	0.96 %
Amaricoccus sp. HAR-UPW-R2A-40	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Amaricoccus → unclassified Amaricoccus → Amaricoccus sp. HAR-UPW-R2A-40	0.96 %
Gloeobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria → Gloeobacterales → Gloeobacteraceae → Gloeobacter	0.96 %
Pseudomonas arcuscaelestis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas arcuscaelestis	0.96 %
Mesorhizobium muleiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium muleiense	0.96 %
Rhizomicrobium palustre	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium → Rhizomicrobium palustre	0.96 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %
Gloeobacter kilaueensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria → Gloeobacterales → Gloeobacteraceae → Gloeobacter → Gloeobacter kilaueensis	0.96 %
Janthinobacterium sp. 551a	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium → unclassified Janthinobacterium → Janthinobacterium sp. 551a	0.96 %
Amaricoccus sp. HAR-UPW-R2A-40	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Amaricoccus → unclassified Amaricoccus → Amaricoccus sp. HAR-UPW-R2A-40	0.96 %
Pseudomonas arcuscaelestis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas arcuscaelestis	0.96 %
Mesorhizobium muleiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium muleiense	0.96 %
Rhizomicrobium palustre	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium → Rhizomicrobium palustre	0.96 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10198200	Not Available	1356	Open in IMG/M
3300002568\|C688J35102_117912832	Not Available	515	Open in IMG/M
3300002568\|C688J35102_120984079	All Organisms → cellular organisms → Bacteria → Proteobacteria	5652	Open in IMG/M
3300004800\|Ga0058861_10647981	Not Available	636	Open in IMG/M
3300005175\|Ga0066673_10431966	Not Available	772	Open in IMG/M
3300005238\|Ga0073692_1018426	All Organisms → cellular organisms → Bacteria → Proteobacteria	1198	Open in IMG/M
3300005336\|Ga0070680_100000033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	70320	Open in IMG/M
3300005339\|Ga0070660_101701090	Not Available	537	Open in IMG/M
3300005344\|Ga0070661_100343906	All Organisms → cellular organisms → Bacteria → Proteobacteria	1169	Open in IMG/M
3300005344\|Ga0070661_100741624	Not Available	802	Open in IMG/M
3300005435\|Ga0070714_101723225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas arcuscaelestis	612	Open in IMG/M
3300005435\|Ga0070714_101895620	Not Available	582	Open in IMG/M
3300005435\|Ga0070714_101901087	Not Available	581	Open in IMG/M
3300005437\|Ga0070710_10947986	Not Available	624	Open in IMG/M
3300005439\|Ga0070711_101443677	Not Available	599	Open in IMG/M
3300005451\|Ga0066681_10478160	Not Available	767	Open in IMG/M
3300005454\|Ga0066687_10961446	Not Available	509	Open in IMG/M
3300005535\|Ga0070684_101157147	Not Available	727	Open in IMG/M
3300005535\|Ga0070684_101309327	Not Available	682	Open in IMG/M
3300005538\|Ga0070731_10016464	All Organisms → cellular organisms → Bacteria → Proteobacteria	5217	Open in IMG/M
3300005539\|Ga0068853_100000649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	23861	Open in IMG/M
3300005539\|Ga0068853_100195571	All Organisms → cellular organisms → Bacteria → Proteobacteria	1839	Open in IMG/M
3300005563\|Ga0068855_100000111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	102282	Open in IMG/M
3300005563\|Ga0068855_100548172	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300005576\|Ga0066708_10487997	Not Available	793	Open in IMG/M
3300005614\|Ga0068856_100261987	All Organisms → cellular organisms → Bacteria	1744	Open in IMG/M
3300005614\|Ga0068856_100492016	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300005614\|Ga0068856_100935984	Not Available	885	Open in IMG/M
3300005614\|Ga0068856_102037959	Not Available	584	Open in IMG/M
3300005616\|Ga0068852_100002779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12121	Open in IMG/M
3300005834\|Ga0068851_10265647	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300006173\|Ga0070716_100626797	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300006175\|Ga0070712_100908723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Amaricoccus → unclassified Amaricoccus → Amaricoccus sp. HAR-UPW-R2A-40	759	Open in IMG/M
3300006237\|Ga0097621_100028879	All Organisms → cellular organisms → Bacteria	4376	Open in IMG/M
3300006237\|Ga0097621_101306811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium → unclassified Janthinobacterium → Janthinobacterium sp. 551a	685	Open in IMG/M
3300006358\|Ga0068871_100047485	All Organisms → cellular organisms → Bacteria	3463	Open in IMG/M
3300006358\|Ga0068871_100578825	All Organisms → cellular organisms → Bacteria → Proteobacteria	1019	Open in IMG/M
3300006358\|Ga0068871_100663894	All Organisms → cellular organisms → Bacteria → Proteobacteria	953	Open in IMG/M
3300006797\|Ga0066659_10894091	Not Available	741	Open in IMG/M
3300006800\|Ga0066660_11638344	Not Available	511	Open in IMG/M
3300009093\|Ga0105240_10000122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	162728	Open in IMG/M
3300009101\|Ga0105247_10090567	All Organisms → cellular organisms → Bacteria → Proteobacteria	1941	Open in IMG/M
3300009174\|Ga0105241_10255612	All Organisms → cellular organisms → Bacteria → Proteobacteria	1487	Open in IMG/M
3300009545\|Ga0105237_10522041	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300009545\|Ga0105237_12317308	Not Available	547	Open in IMG/M
3300010358\|Ga0126370_12570328	Not Available	509	Open in IMG/M
3300010362\|Ga0126377_10175730	All Organisms → cellular organisms → Bacteria	2033	Open in IMG/M
3300010371\|Ga0134125_11218858	Not Available	822	Open in IMG/M
3300010375\|Ga0105239_10008127	All Organisms → cellular organisms → Bacteria → Proteobacteria	11976	Open in IMG/M
3300010375\|Ga0105239_12115131	Not Available	654	Open in IMG/M
3300010396\|Ga0134126_10367610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria → Gloeobacterales → Gloeobacteraceae → Gloeobacter → Gloeobacter kilaueensis	1675	Open in IMG/M
3300010399\|Ga0134127_10649185	Not Available	1090	Open in IMG/M
3300010399\|Ga0134127_11132533	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300010401\|Ga0134121_12275119	Not Available	580	Open in IMG/M
3300012212\|Ga0150985_114416419	Not Available	623	Open in IMG/M
3300012469\|Ga0150984_103619067	Not Available	584	Open in IMG/M
3300012469\|Ga0150984_116666111	Not Available	646	Open in IMG/M
3300012930\|Ga0137407_11721702	Not Available	597	Open in IMG/M
3300012960\|Ga0164301_10043312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2260	Open in IMG/M
3300013100\|Ga0157373_11457158	Not Available	522	Open in IMG/M
3300013105\|Ga0157369_12178188	Not Available	562	Open in IMG/M
3300013297\|Ga0157378_10390513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1369	Open in IMG/M
3300013307\|Ga0157372_10054507	All Organisms → cellular organisms → Bacteria → Proteobacteria	4461	Open in IMG/M
3300013307\|Ga0157372_10156937	Not Available	2629	Open in IMG/M
3300013307\|Ga0157372_10986600	Not Available	976	Open in IMG/M
3300014969\|Ga0157376_11050094	Not Available	839	Open in IMG/M
3300015197\|Ga0167638_1039864	All Organisms → cellular organisms → Bacteria → Acidobacteria	1050	Open in IMG/M
3300015245\|Ga0137409_11434061	Not Available	537	Open in IMG/M
3300018482\|Ga0066669_10841462	Not Available	816	Open in IMG/M
3300021377\|Ga0213874_10004840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium → Rhizomicrobium palustre	3107	Open in IMG/M
3300021384\|Ga0213876_10014527	All Organisms → cellular organisms → Bacteria	4172	Open in IMG/M
3300021478\|Ga0210402_10086674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium muleiense	2795	Open in IMG/M
3300025900\|Ga0207710_10439331	Not Available	673	Open in IMG/M
3300025911\|Ga0207654_10313705	Not Available	1070	Open in IMG/M
3300025912\|Ga0207707_10000002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1142054	Open in IMG/M
3300025913\|Ga0207695_10000173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	189050	Open in IMG/M
3300025913\|Ga0207695_10641659	All Organisms → cellular organisms → Bacteria → Proteobacteria	943	Open in IMG/M
3300025914\|Ga0207671_10179751	All Organisms → cellular organisms → Bacteria → Proteobacteria	1646	Open in IMG/M
3300025924\|Ga0207694_10000005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	823704	Open in IMG/M
3300025939\|Ga0207665_10278037	Not Available	1245	Open in IMG/M
3300025949\|Ga0207667_10000011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	447785	Open in IMG/M
3300025949\|Ga0207667_10596797	All Organisms → cellular organisms → Bacteria → Proteobacteria	1114	Open in IMG/M
3300026041\|Ga0207639_10000354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31674	Open in IMG/M
3300026078\|Ga0207702_10964473	Not Available	846	Open in IMG/M
3300026078\|Ga0207702_11384214	Not Available	697	Open in IMG/M
3300026078\|Ga0207702_11838440	Not Available	597	Open in IMG/M
3300026142\|Ga0207698_10054594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3074	Open in IMG/M
3300026301\|Ga0209238_1093207	Not Available	1031	Open in IMG/M
3300027869\|Ga0209579_10007791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6868	Open in IMG/M
3300028536\|Ga0137415_11455707	Not Available	509	Open in IMG/M
3300028573\|Ga0265334_10040893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1813	Open in IMG/M
3300028880\|Ga0307300_10363429	Not Available	501	Open in IMG/M
3300031231\|Ga0170824_125340349	Not Available	604	Open in IMG/M
3300031716\|Ga0310813_10170348	All Organisms → cellular organisms → Bacteria	1766	Open in IMG/M
3300031720\|Ga0307469_11697244	Not Available	609	Open in IMG/M
3300031730\|Ga0307516_10021909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6565	Open in IMG/M
3300031938\|Ga0308175_100569213	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300031938\|Ga0308175_100712679	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1091	Open in IMG/M
3300031939\|Ga0308174_10432483	Not Available	1065	Open in IMG/M
3300031996\|Ga0308176_11761155	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	661	Open in IMG/M
3300032074\|Ga0308173_10023044	All Organisms → cellular organisms → Bacteria	4211	Open in IMG/M
3300032180\|Ga0307471_102613085	Not Available	640	Open in IMG/M
3300032180\|Ga0307471_104191043	Not Available	509	Open in IMG/M
3300032828\|Ga0335080_10097069	All Organisms → cellular organisms → Bacteria	3269	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	50.96%
Environmental	Environmental	49.04%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	50.00%
Terrestrial	Environmental → Terrestrial	49.04%
Human	Host-Associated → Human	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.31%
Roots	Host-Associated → Plants → Roots	7.69%
Digestive System	Host-Associated → Human → Digestive System	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.23%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.35%
Loam	Environmental → Terrestrial → Soil → Loam	15.38%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.77%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	4.81%
Unclassified	Host-Associated → Plants → Roots → Unclassified	2.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.96%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.73%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	4.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.85%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	2.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.96%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	16.35%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	10.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.77%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	4.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.92%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.92%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.92%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.96%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.96%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.96%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005238	Microbial communities on the surface of aged kaolinite enhanced biochar from soil in Sydney, Australia	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015197	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6B, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031730	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_101982002	3300001686	Soil	MRRVLLLSAVALVMCAGNATAATTVSISFDGLCDGMDIIVDKFGRSALETGNGCDEGAHFGAGTIGRIKNRGNTITFGVNLSAKGGEAYQYIFVISYPFVTGARWSNFYTQDGKTRSKTFSGTYTVNGGARHQINGL
C688J35102_1179128321	3300002568	Soil	VAFAMCVATSASAKIVSISFDGLCDGLDMIVNKDTRMALEVGNGCDEGAHFGAGTIGRIKGQGNAITFGVNLHGKGVDTYQYIFVISYPFVTGGAWSNFYTQDGKTFSRISTGTYTVNGTARRETQGLKSSTDRPR*
C688J35102_1209840795	3300002568	Soil	MRRVLLLSAVALVMCAGNATAATTVSISFDGLCDGMDIIVDKFGRSALETGNGCDEGAHFGAGTIGRIKNRGNTITFGVNLSAKGGEAYQYIFVISYPFVTGARWSNFYTQDGKTRSKTFSGTYTVNGGARHQINGLKSSTDRPH*
Ga0058861_106479812	3300004800	Host-Associated	GAAALAMLCASGAAIADTVSISFDQLCDGMDITVNKVNRTALSLGNGCDVGANFGIGTMSRIRDRGHTVTLAVNLSGKGGGAYQYVYVIDYPFVTGGSWSNFYTTDGVTMSRITTGTYTVSDGAAKKSDGLKSSTDRR*
Ga0066673_104319662	3300005175	Soil	MKRIVLLGAAALAMCAGHAASAKTVSISFDQLCDGMDIIVDKDTRTALETGNGCDQGAHFGAGTIGKIKLRGNAITFGVNLNAKGGGAYQYIYVISYPLVTGSTWSNFYTQDGKTLSRDFTGTYTVNGGAQHETRGRRSSTDRPR*
Ga0073692_10184261	3300005238	Soil	MFRLKEKRFAIYSRLNVSSEIFEGTFHMKRLLLPAAAALAMLCAGGAAMADTVSISFDKLCDGMDIIVNTATRTALETGNGCDEGAHFGAGTIGRIKVRGNTLTFGVNLYGKGGGAYQYIYVIDYPLVTGSSWSNFYTTDVKTLSIITTGTYTVGAAPRRDGLKSSTALH
Ga0070680_10000003377	3300005336	Corn Rhizosphere	VKNILLSGAAALAMLCASGAAIADTVSISFDQLCDGMDITVNKVNRTALSLGNGCDVGANFGIGTMSRIRDRGHTVTLAVNLSGKGGGAYQYVYVIDYPFVTGGSWSNFYTTDGVTMSRITTGTYTVSDGAAKKSDGLKSSTDRR*
Ga0070660_1017010901	3300005339	Corn Rhizosphere	MSGKLGTMNAKRILLLGATVLAMSCASSAAMAAGTVSISFFGLCDGMDILVNKTTQTALETGNGCDLGANFGAGTIGKIKGRGKTITFAVNLSAKGGSAYQYVYVIDYPLVTGGRWTNFYTMDGKTVGKGGGGT
Ga0070661_1003439062	3300005344	Corn Rhizosphere	MKRILLAGATVLAMSAAGSPAIAARTASISFDGLCDGMDITVDRRNHTAMATGNGCDEGANFGIGTMGKLKVRGKSLTLAVNLSGKGGGAYQYVYVIDYPFVTGASWSNFYTTDGHTMSRVSNGTYTVGGTASRKTTGVKSSTDLH*
Ga0070661_1007416242	3300005344	Corn Rhizosphere	MKRLLLPAAAALAILCAGSAAMADAVSISFDKLCDGMDILVNTANRTALETGNGCDEGAHFGAGTMGRIKVRGNTLTFGVNLNGKGGGAYQYIYVIDYPLVTGASWSNFYTTDGKTLSRVTTGTYTVGAAPRRDGKSSTDLH*
Ga0070714_1017232251	3300005435	Agricultural Soil	DGFCDGLDIIVNKTDRTALEVGNGCDQGAHFGAGTIGKIKGRGNAITFGIDLTPKGGGAYQYIFVVSYPLVTGSTWSEFYTTDGKTLLGQYTGTYTVTSAATRATRGLGSSTDRPHQR*
Ga0070714_1018956201	3300005435	Agricultural Soil	MKIALLLSAAALAMCCAGSAAAAKTVSISFDGLCDGMDIIVNKTDRTALETGNGCDEGAHFGAGTIGTIKGVGKAITFGVNLSAKGGGAYQYIFVVSYPFVTGASWSNFYTTDGKTLSREFTGTYTVNGAHRHEARGLASSTGARR*
Ga0070714_1019010871	3300005435	Agricultural Soil	MKIALVMSAAALAMCAGSAAAAKTVSISFDNLCDGMDIIVNKTDRTALETGNGCDAGAHFGAGTIGKIKLRGDAITFGVNLYAKGGGAYQYIYVISYPLVTGATWSNFYTTDGKTLSQEFTGTYTVTGGARHETEGLRS
Ga0070710_109479862	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	SSAAMAEQVSISFDGLCDGMDISPNKTNHTALSIGNGCDVGANFGIGTIGKTRDRGHVITLAVNLSGKGGGAYQYVYVIDYPLVTGGHWSNFYTTDGLTMSRISTGTYTVGGTATRNVEGLRSSTDQR*
Ga0070711_1014436771	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKTALLMSALAMCWASAAPAKTVSISFDNLCDGMDIIVNGTDRTALEVGNGCDAGAHFGAGTIGKIKNRGNAITFGVNLYAKGGGAYQYIYVISYPLVTGATWSNLYTTDGKTLSKEF
Ga0066681_104781602	3300005451	Soil	MKRILLVGAVALAVSAASASAKTTSISFDGLCDGMDIVVNRTDRTALETGNGCDEGAHFGAGTIGKIKLRGNTITFGVNLSAKGGGAYQYIYVISYPFVTGGTWSNFYTTDGKTLSKQFTGTYTVNGAAARHETKGLRSSTDRAGQ*
Ga0066687_109614461	3300005454	Soil	EKSLRAIQMKKMLVLSVAALAMCAGPAATAKTKMVSISFDHACDGMDIILDTTAHTALETGNGCDQGAHFGAGTIGEIKGRGKVITFGVNLYGKGGGAYQYIFVISYPLVTGSTWSNFYTTDGKTLTRDFVGTYTVTGAAARSTKGLRSSTERAR*
Ga0070684_1011571471	3300005535	Corn Rhizosphere	ARTASISFDGLCDGMDITVDRRNHTAMATGNGCDEGANFGIGTMGKLKVRGKSLTLAVNLSGKGGGAYQYVYVIDYPFVTGASWSNFYTTDGHTMSRVSNGTYTVGGTASRKTTGVKSSTDLH*
Ga0070684_1013093271	3300005535	Corn Rhizosphere	MKKLLLAGAAAVAMLCASHAAMANPVSISFDGGCDGMDITVLPKSHIALETGNGCDEGAHFGAGTIGKVKGTGKAITFGINLYGKGGGAYQYIFVISYPLVTGGAWSNFYTQDGKTFVRQYSGTYTVNGAAHHSSNGHRSSTDRVR*
Ga0070731_100164642	3300005538	Surface Soil	MKTALLASVAALAICAGGAAAAKTTSISFDGFCDGLDIIVNTTDRTALETGNGCDEGAHFGAGTIGKIKGRGNAITFGIDLTPKGGGAYQYIFIVSYPLVTGSTWSEFYTTDGKTIQGRYTGTYTVAGAGAHVTRGPKSSTDRMH*
Ga0068853_10000064925	3300005539	Corn Rhizosphere	MKNLLLAGATMLAMCCAGSSAQAAAVSIAFDGLCDGMDITMNTPNRAALELGNGCDVGAHFGIGTISRFKDRGRAITFAVNLSGKGGSGYQYVYVVDYPLVTGGTWSNFYTQDGVTMSRISTGTYTVGGGDKSRNGLKSSTDLH*
Ga0068853_1001955712	3300005539	Corn Rhizosphere	MFRLKEKRFAIYSRLNVSSEIFEGTLYMKRLLLPAAAALAMLCAGSAAMADTVSISFDKLCDGMDIIVNTATRTALETGNGCDEGAHFGAGTIGRIKVRGNTLTFGVNLYGKGGGAYQYIYVIDYPLVTGASWSNFYTTDGKTLSRITTGTYTVGAAPRRDGLKSSTALH*
Ga0068855_10000011136	3300005563	Corn Rhizosphere	MNAKRILLLGATVLAMSCASSAAMAAGTVSISFFGLCDGMDILVNKTTQTALETGNGCDLGANFGAGTIGKIKGRGKTITFAVNLSAKGGSAYQYVYVIDYPLVTGGRWTNFYTMDGKTVGKGGGGTYNVGGDPHRNANGLRSSTDLH*
Ga0068855_1005481722	3300005563	Corn Rhizosphere	MFRLKETRFAIYSRLNVSSEIFEGTLYMKRLLLPAAAALAMLCAGSAAMADTVSISFDKLCDGMDIIVNTATRTALETGNGCDEGAHFGAGTIGRIKVRGNTLTFGVNLYGKGGGAYQYIYVIDYPLVTGASWSNFYTTDGKTLSRITTGTYTVGAAPRRDGLKSSTALH*
Ga0066708_104879972	3300005576	Soil	MKIALLMSAAALAMCAGSAAAKTVSISFDNLCDGMDIIVNKTDRTALETGNGCDAGAHFGAGTIGKIKLWGNAITFGVNLNAKGGGAYQYIYVISYPLVTGSTWSNFYTQDGKTLSRDFTGTYTVNGGAQHETRGRRSSTDRPR*
Ga0068856_1002619872	3300005614	Corn Rhizosphere	MRKALLICAVPLALCMHGPATAKTVSISFDGLCDGMDIIVDKSGHTALETGNGCDEGAHFGAGTVGSIKDRGKAITFGVNLYGKGGGAYQYIYVISYPLVSGSTWSNFYTQDGKTLSKQFTGTYTVTGGAPHAAKGARSSTDVAR*
Ga0068856_1004920163	3300005614	Corn Rhizosphere	ILLLSAAAFLAFGQSANAQIKTVSISFDGLCDGLDIQVDTSSRLALETGNGCDQGAHFGAGTIGKIKGRGNAITLGVNLSAKGGGAYQYIYVIDYPLVTGGSWSNFYTTDGKTLSKQFTGTYTVSGGALKRNAGGRSSTARP*
Ga0068856_1009359841	3300005614	Corn Rhizosphere	ISFDGLCDGLDIIVNKDTRTALETGNGCDEGAHFGAGTIGRIKNTGNAITFGVNLYAKGGGAYQYIYVISYPLVTGATWSNFYTTDGKTLSKQFTGTYTVNGGARHRTKGLRSSTDRPQ*
Ga0068856_1020379592	3300005614	Corn Rhizosphere	TPDYEGSKMKRLLLAGAVAVAMLSASNAATANPVSISFDGGCDGMDITVLPQSHIALETGNGCDEGAHFGAGTIGKVKGTGKAITFGINLYGKGGGAYQYIFVISYPLVTGGAWSNFYTQDGKTFVRQYSGTYTVNGAAHHSSNGHRSSTDRIR*
Ga0068852_1000027796	3300005616	Corn Rhizosphere	MNAKRILLLGATILAMSCASSGAMAAGTVSISFFGLCDGMDILVNKTAQTALETGNGCDLGANFGAGTIGKIKARGKAITFAVNLSGKGGSAYQYVYVIDYPLVTGGRWTNFYTMDGKTVGKGGGGTYNVGGDPHRNANGLRSSTDLH*
Ga0068851_102656471	3300005834	Corn Rhizosphere	MFRLKEKRFAIYSRLNVSSEIFEGTFHMKRLLLPAAAALAMLCAGSAAMADTVSISFDKLCDGMDIIVNTATRTALETGNGCDEGAHFGAGTIGRIKVRGNTLTFGVNLYGKGGGAYQYIYVIDYPLVTGASWSNFYTTDGKTLSRITTGTYTVGAAPRRDGLKSSTALH*
Ga0070716_1006267972	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKRVLLLGAAALAMCVGQPAMAKTKMVSISFDHGCDGMDIILDTTAHTALETGNGCDQGAHFGAGTIGEIKGLGKVITFGINLYGKGGGAYQYIFVISYPLITGGSWSNFYTTDGKTLTRDFAGTYTVTGAAARTTKGSRNSTSRDHQ*
Ga0070712_1009087232	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LLMSALAMCWASAAPAKTVSISFDNLCDGMDIIVNGTDRTALEVGNGCDAGAHFGAGTIGKIKNRGNAITFGVNLYAKGGGAYQYIYVISYPLVSGATWSNFYTTDGKTLSKEFSGTYTVTSGARHAAKGLRSSTDRPQ*
Ga0097621_1000288793	3300006237	Miscanthus Rhizosphere	MRRVLVLGAAALAMCVASPAMAKKVSISFDGHCDGLDIILDKADRLALETGNGCDEGAHFGVGTIGRINGRGNAITFAINLSPKGGEAYQYIFVVDYPLVTGGRFTTVYTQDGETLSKEGTGTYTVNGGTRHQTKGLKSSTDRLR*
Ga0097621_1013068111	3300006237	Miscanthus Rhizosphere	MKRLLLPAAAALAMLCAGSAAMADAVSISFDKLCDGMDILVNTANRTALETGNGCDEGAHFGAGTMGRIKVRGNTLTFGVNLNGKGGGAYQYIYVIDYPLVTGASWSNFYTTDGKTLSRVTTGTYTVGAAPRRDGKSSTDLH*
Ga0068871_1000474854	3300006358	Miscanthus Rhizosphere	MRRVLLVSAVALAMCAGNAATAKTVSISFDGLCDGLDIIVNKDTRTALETGNGCDEGAHFGAGTIGRIKNTGNAITFGVNLYAKGGGAYQYIYVISYPLVTGATWSNFYTTDGKTLSKQFTGTYTVNGGARHRTKGLRSSTDRPQ*
Ga0068871_1005788252	3300006358	Miscanthus Rhizosphere	MRRVLLLGAVALAMCAGNAASAKTVSISFDGLCDGLDMIVNKDTRMALEVGNGCDEGAHFGAGTIGRIKGQGNAITFGVNLHGKGVDTYQYIFVISYPFVTGGAWSNFYTQDGKTFSRISTGTYTVNGGARHQTKGLRSSTDRPR*
Ga0068871_1006638941	3300006358	Miscanthus Rhizosphere	PRIISRLACQNLVRLSFMRFAIYTWRNGTLKSLGTLHMKRLLLPAAAALAMLCAGSAAMADAVSISFDKLCDGMDILVNTANRTALETGNGCDEGAHFGAGTMGRIKVRGNTLTFGVNLNGKGGGAYQYIYVIDYPLVTGASWSNFYTTDGKTLSRVTTGTYTVGAAPRRDGKSSTDLH*
Ga0066659_108940911	3300006797	Soil	MKTALLMSAAALAMCVGSAAAAKTVSISFDGLCDGMDIIVNGTDRTALETGNGCDQGAHFGAGTIGRIRGRGNTITLGVNLSPKGGDAYQYIYVISYPLVTGSTWSNFYTTDGKTMSRQNTGTYTVTGAPPHG
Ga0066660_116383441	3300006800	Soil	NLSMKTALLMSAAALAMCVGSAAAAKTVSISFDGLCDGMDIIVNGTDRTALETGNGCDQGAHFGAGTIGRIRGRGNTITLGVNLSPKGGDAYQYIYVISYPLVTGSSWSNFYTMDGKTMSRQNTGTYTVTGAAARDTRGLGSSTDRPHQR*
Ga0105240_10000122147	3300009093	Corn Rhizosphere	MNAKRILLLGATVLAMSCASSAAMAAGTVSISFFGLCDGMDILVNKTTQTALETGNGCDLGANFGAGTIGKIKGRGKTITFAVNLSGKGGSAYQYVYVIDYPLVTGGRWTNFYTMDGKTVGKGGGGTYNVGGDPHRNANGLRSSTDLH*
Ga0105247_100905671	3300009101	Switchgrass Rhizosphere	MFRLKEKRFALYSWLNVSSEIFEGTFHMKRLLLPAAAALAMLCAVSAAMADTVSISFDKLCDGMDIIVNTATRTALETGNGCDEGAHFGAGTIGRIKVRGNTLTFGVNLYGKGGGAYQYIYVIDYPLVTGASWSNFYTTDGKTLSRITTGTYTVGAAPRRDGLKSSTALH*
Ga0105241_102556123	3300009174	Corn Rhizosphere	VKNILLSGAAALAMLCTSGAAIADTVSISFDQLCDGMDITVNKVNRTALSLGNGCDVGANFGIGTMSRIRDRGHTVTLAVNLSGKGGGAYQYVYVIDYPFVTGGSWSNFYTTDGVTMSRITTGTYTVSDGTAKKSDGLKSSTDRR*
Ga0105237_105220411	3300009545	Corn Rhizosphere	MFRLKETRFAIYSRLNVSSEIFEGTLYMKRLLLPAAAALAMLCAGGAAMADTVSISFDKLCDGMDIIVNTATRTALETGNGCDEGAHFGAGTIGRIKVRGNTLTFGVNLYGKGGGAYQYIYVIDYPLVTGASWSNFYTTDGKTLSRITTGTYTVGAAPRRDGLKSSTALH*
Ga0105237_123173081	3300009545	Corn Rhizosphere	MKRLLLAGAAALAMSCTCNAAMADTVSIAFDGLCDGMDISVNKENRTGMEVGNGCDVGAHFGAGTMSRMKDRGRAITFGVNLSGKGGTAYQYIYVVDYPFVTGGHWSNFFTQDGHTLSRITTGTYTLGSPPARNGQPSSTD
Ga0126370_125703281	3300010358	Tropical Forest Soil	MKRVLPAVAVLSMLCVGDAAAAKTVSIAFDGLCDGMDITVNKDNRTALETGNGCDEGANFGAGTIGKIKGRGNAITFGVNLSPKGGAAYQYIYVVDYPFVTGGSWSNFFTTDGKTVSKLSTGTYTVGGAAPRKADGLKSSTDLH*
Ga0126377_101757302	3300010362	Tropical Forest Soil	MAMKSVLLPAVAALSMLCVGDAAAAKTVSIAFDGLCDGMDITVNKDNRTALETGNGCDEGANFGAGTIGKIKGRGNAITFGVNLSPKGGAAYQYIYVVDYPFVTGGSWSNFFTTDGKTVSKLSTGTYTVGGAAPRKADGLKSSTDLH*
Ga0134125_112188582	3300010371	Terrestrial Soil	MNAKRILLLGATVLAMSCAGSGAMAGTVSIAFDGLCDGMDILVNKTNQTALETGNGCDVGANFGAGTIGKIKARGKTITFAVNLSGKGGSAYQYVYVIDYPFVTGGHWSNFYTMDGQTVGKGGGGTYTVGGDPHRNANGLRSSTDLH*
Ga0105239_100081272	3300010375	Corn Rhizosphere	MNAKRILLLGATVLAMSCASGAAMAAGTVSISFFGLCDGMDILVNKTTQTALETGNGCDLGANFGAGTIGKIKARGKTITFAVNLSGKGGSAYQYVYVIDYPLVTGGRWTNFYTMDGKTVGKGGGGTYNVGGDPHRNANGLRSSTDLH*
Ga0105239_121151311	3300010375	Corn Rhizosphere	MFRLKEKRFAIYSRLNVSSEIFEGTLYMKRLLLPAAAALAMLCAGSAAMADTVSISFDKLCDGMDIIVNTATRTALETGNGCDEGAHFGAGTIGRIKVRGNTLTFGVNLYGKGGGAYQYIYVIDYPLVTGASWSNFYTTDGKTLSRITTGTYTVGAAPRRDGLKSSTAL
Ga0134126_103676102	3300010396	Terrestrial Soil	MKRIFLPAAAALALCASPAAAKSVSISFDGGCDGMDIVVPAHSHIALETGNGCDEGAHYGAGTIGKVKGFGDAITFGINLYGKGGGDYQYIFVISYPLVTGGTWKNFYTQNGKTYTPQFSGTYTVTGTPGHRNAAGKSSTGRPR*
Ga0134127_106491852	3300010399	Terrestrial Soil	MKKLLLAGAAAMAMLSASNAAMANPVSISFDGGCDGMDITVLPKSHIALETGNGCDEGAHFGAGTIGKVKGTGKAITFGINLYGKGGGAYQYIFVISYPLVTGGAWSNFYTQDGKTFVRQYSGTYTVNGAAHHSSNGHRSSTDRVR*
Ga0134127_111325332	3300010399	Terrestrial Soil	VKNILLSGAAALAMLCASGAAIADTVSISFDQLCDGMDITVNKVNRTALSLGNGCDVGANFGIGTMSRIRDRGHTVTLAVNLSGKGGGAYQYVYVIDYPFVTGGSWSNFYTTDGVTMSRITTGTYTVSDGTAKKSDGLKSSTDPR*
Ga0134121_122751191	3300010401	Terrestrial Soil	MKKILLLSAVALAMCVGDAATAKTKMVSISFDKLCDGMDIIVNTDTRTALETGNGCDAGAHFGAGTIGKIKGRGNAITFGVNLYGKGGGAYQYIYVISYPLVSGSTWSNFYTQDGKTLSRDFVGTYTVTGGA
Ga0150985_1144164191	3300012212	Avena Fatua Rhizosphere	QTLEHKVKRIFLACAVAFAMCVATSASAKIVSISFDGLCDGLDMIVNKDTRMALEVGNGCDEGAHFGAGTIGRIKGQGNAITFGVNLHGKGGDTYQYIFVISYPFVTGGAWSNFYTQDGKTFSRISTGTYTVNGTARRETQGLKSSTDRPR*
Ga0150984_1036190671	3300012469	Avena Fatua Rhizosphere	MRRVLLLSAVALVMCAGNATAATTVSISFDGLCDGMDIIVDKFGRSALETGNGCDEGAHFGAGTIGRIKNRGNTITFGVNLSAKGGEAYQYIFVISYPFVTGARWSNFYTQDGKTRSKTFSGTYTVNGGARRQIKGLKSSTDRPH*
Ga0150984_1166661111	3300012469	Avena Fatua Rhizosphere	MKKLLLLSAVAVLAGVPSAFGATVSISFSGLCDGMDIQVNKAERPALETGSGCDQGAHFGAGTIGKIKGRGNAITFGVNLSAKGGGAYQYIYVIDYPLVSGGSWSNFYTTDGKTLSKEFTGTYTVNGAAVRPNAGGRSSTERR*
Ga0137407_117217021	3300012930	Vadose Zone Soil	MKRPLLPAAAALAMLCAGSAAMAGAVSISFDKLCDGMDILVNTDNRTALETGNGCDEGAHFGAGTIGKIKDRGKTITFGVNLSAKGGGAYQYIYVIDYPLVTGAGWSNFYTLDGKTLSRINTGTYTVGAAPRHGTDGLKSSTALH*
Ga0164301_100433124	3300012960	Soil	MKRVLLLGAAALAMCVGQPAMAKTKMVSISFDHGCDGMDIILDTTAHTALETGNGCDQGAHFGAGTIGEIKGLGKVITFGINLYGKGGGAYQYIFVISYPLITGGSWSNFYTTEGKTLTREFAGTYTVTGAAARTTKGSRNSTSRDHQ*
Ga0157373_114571581	3300013100	Corn Rhizosphere	MKKLLLAGAAAVAMLSAGNAAMANPVSISFDGGCDGMDITVLPQSHIALETGNGCDEGAHFGAGTIGKVKGTGKAITFGINLYGKGGGAYQYIFVISYPLVTGGAWSNFYTQDGKTFVRQYSGTYTVNGAAHHSSNGHRSSTDRI
Ga0157369_121781881	3300013105	Corn Rhizosphere	VKNILLSGAAALAMLCTSGAAIADTVSISFDQLCDGMDITVNKVNRTALSLGNGCDVGANFGIGTMSRIRDRGHTVTLAVNLSGKGGGAYQYVYVIDYPFVTGGSWSNFYTTDGVTMSRITTG
Ga0157378_103905132	3300013297	Miscanthus Rhizosphere	MKRILLPVALAMMCSSSAAMAEQVSISFDGLCDGMDISPNKTNHTALSIGNGCDVGANFGIGTIGKTRDRGHVITLAVNLSGKGGGAYQYVYVIDYPLVTGGHWSNFYTTDGLTMSRISTGTYTVGGTATRNAEGLRSSTDQR*
Ga0157372_100545072	3300013307	Corn Rhizosphere	VERNVKRILLAGAAALATFAGSAATAKTVSISFDGLCDGLDIIVNKDTRTALETGNGCDEGAHFGAGTIGKIKNRGNAITFGVNLYGKGGGAYQYIYVISYPLVSGSTWSNFYTQDGKTLSKQFTGTYTVTGAARHAARGSRSSTGLPR*
Ga0157372_101569372	3300013307	Corn Rhizosphere	MKKLLLAGAAAVAMLCASHAAMANPVSISFDGGCDGMDITVLPQSHIALETGNGCDEGAHFGAGTIGKVKGTGKAITFGINLYGKGGGAYQYIFVISYPLVTGGAWSNFYTQDGKTFVRQYSGTYTVNGAAHHSSNGHRSSTDRIR*
Ga0157372_109866001	3300013307	Corn Rhizosphere	MNAKRILLLGATVLAMSCASSAAMAAGTVSISFFGLCDGMDILVNKTTQTALETGNGCDLGANFGAGTIGKIKARGKTITFAVNLSGKGGSAYQYVYVIDYPLVTGGRWTNFYTMDGKTVGKGGGGTYNVGGDPHRNANGLRSSTDLH*
Ga0157376_110500941	3300014969	Miscanthus Rhizosphere	ILKDTQKMRRVLLVSAVALAMCAGNAATAKTVSISFDGLCDGLDIIVNKDTRTALETGNGCDEGAHFGAGTIGRIKNTGNAITFGVNLYAKGGGAYQYIYVISYPLVTGATWSNFYTTDGKTLSKQFTGTYTVNGGARHRTKGLRSSTDRPQ*
Ga0167638_10398642	3300015197	Glacier Forefield Soil	MLCANSTAMAKTVSISFDNLCDGMDIIVDKASGNALETGNGCDEGAHFGAGTVGKVKVRGHAIPFGVNLYGKGGGAYQYIYVISYPFVTGGTWSNFSTTDGKTLSREFTGTYTVSGTPSHETRGLRSSTGRPR*
Ga0137409_114340611	3300015245	Vadose Zone Soil	MKRVLLSGAAALAMMCAGSAAMATTVSISFDGLCDGLDIAVNKADRTALETGNGCDEGAHFGAGTIGKIKDRGKTITFGVNLSAKGGGAYQYIYVIDYPLVTGAGWSNFYTLDGKTLSRINTGTYTVGAAPRHGTADLKSSTALH*
Ga0066669_108414621	3300018482	Grasslands Soil	MKIALLMSAAALAMCAGSAAVAKTVSISFDGLCDGMDIIVNKTDRTALETGNGCDAGAHFGAGTIGMIKNRGNAITFGVNLTAKGGGAYQYIFVISYPLVTGATWSNFYTTDGKTLSQEFTGTYTVNSAAPHETRGLRSSTDRPH
Ga0213874_100048402	3300021377	Plant Roots	VKRILLPCVLAAAFCASGASAKKTSISFDGLCDGMNISVNEAIQAALETGNGCDKGAHFGAGTIGKIKNRGTAITFGVNLSGKGDTKDQYIYVVDYPLVTGGQWTNFYTSDGKTLSRINGGTYTVGQASRGANSGSRTSLSHDRNAGRLD
Ga0213876_100145273	3300021384	Plant Roots	MKAFLPLAAAALALCVASSATAKNKVSISFDGFCDGLDIILDKPGRLALETGNGCDEGAHFGLGTIGRINNRGNAITFAINLSPKGGEAYQYIFVVDYPLVTGGKFTTVFTQDGKTLSKEGGGTYTVNPPGARRDIAGLKRLIDLRR
Ga0210402_100866742	3300021478	Soil	MKTALLMSAAALVMCAGSAAVAKTVSISFDGLCDGMDVIVNTTDRTALETGNGCDQGANFGAGTIGTIKRRGNAITFGVNLSAKGGSGYQYIYVISYPLVTGASWSNFYTTDGKTLSRQFTGTYTVSGVSPRETRGLRSSTDRPH
Ga0207710_104393311	3300025900	Switchgrass Rhizosphere	NAIVQLPRIISRLACQNLVRLSFMRFAIYTWRNGTLKSLGTLHMKRLLLPAAAALAMLCAGSAAMADAVSISFDKLCDGMDILVNTANRTALETGNGCDEGAHFGAGTMGRIKVRGNTLTFGVNLNGKGGGAYQYIYVIDYPLVTGASWSNFYTTDGKTLSRVTTGTYTVGAAPRRDGKSSTDLH
Ga0207654_103137052	3300025911	Corn Rhizosphere	MKRLLLAGAAALAMSCTCNAAMADTVSIAFDGLCDGMDISVNKENRTGMEVGNGCDVGAHFGAGTMSRMKDRGRAITFGVNLSGKGGTAYQYIYVVDYPFVTGGHWSNFFTQDGHTLSRITTGTYTLGSPPARNGQPSSTDRH
Ga0207707_10000002689	3300025912	Corn Rhizosphere	VKNILLSGAAALAMLCASGAAIADTVSISFDQLCDGMDITVNKVNRTALSLGNGCDVGANFGIGTMSRIRDRGHTVTLAVNLSGKGGGAYQYVYVIDYPFVTGGSWSNFYTTDGVTMSRITTGTYTVSDGAAKKSDGLKSSTDRR
Ga0207695_10000173148	3300025913	Corn Rhizosphere	MNAKRILLLGATVLAMSCASSAAMAAGTVSISFFGLCDGMDILVNKTTQTALETGNGCDLGANFGAGTIGKIKGRGKTITFAVNLSGKGGSAYQYVYVIDYPLVTGGRWTNFYTMDGKTVGKGGGGTYNVGGDPHRNANGLRSSTDLH
Ga0207695_106416592	3300025913	Corn Rhizosphere	MFRLKEKRFAIYSRLNVSSEIFEGTFHMKRLLLPAAAALAMLCAGSAAMADTVSISFDKLCDGMDIIVNTATRTALETGNGCDEGAHFGAGTIGRIKVRGNTLTFGVNLYGKGGGAYQYIYVIDYPLVTGASWSNFYTTDGKTLSRITTGTYTVGAAPRRDGLKSSTALH
Ga0207671_101797513	3300025914	Corn Rhizosphere	MFRLKETRFAIYSRLNVSSEIFEGTLYMKRLLLPAAAALAMLCAGGAAMADTVSISFDKLCDGMDIIVNTATRTALETGNGCDEGAHFGAGTIGRIKVRGNTLTFGVNLYGKGGGAYQYIYVIDYPLVTGASWSNFYTTDGKTLSR
Ga0207694_10000005403	3300025924	Corn Rhizosphere	MNAKRILLLGATILAMSCASSGAMAAGTVSISFFGLCDGMDILVNKTAQTALETGNGCDLGANFGAGTIGKIKARGKAITFAVNLSGKGGSAYQYVYVIDYPLVTGGRWTNFYTMDGKTVGKGGGGTYNVGGDPHRNANGLRSSTDLH
Ga0207665_102780372	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKRVLLLGAAALAMCVGQPAMAKTKMVSISFDHGCDGMDIILDTTAHTALETGNGCDQGAHFGAGTIGEIKGLGKVITFGINLYGKGGGAYQYIFVISYPLITGGSWSNFYTTDGK
Ga0207667_10000011180	3300025949	Corn Rhizosphere	MNAKRILLLGATVLAMSCASSAAMAAGTVSISFFGLCDGMDILVNKTTQTALETGNGCDLGANFGAGTIGKIKGRGKTITFAVNLSAKGGSAYQYVYVIDYPLVTGGRWTNFYTMDGKTVGKGGGGTYNVGGDPHRNANGLRSSTDLH
Ga0207667_105967971	3300025949	Corn Rhizosphere	MFRLKEKRFAIYSRLNVSSEIFEGTLYMKRLLLPAAAALAMLCAGSAAMADTVSISFDKLCDGMDIIVNTATRTALETGNGCDEGAHFGAGTIGRIKVRGNTLTFGVNLYGKGGGAYQYIYVIDYPLVTGASWSNFYTTDGKTLSRITTGTYTVGAAPRRDGLKSSTALH
Ga0207639_1000035433	3300026041	Corn Rhizosphere	MKNLLLAGATMLAMCCAGSSAQAAAVSIAFDGLCDGMDITMNTPNRAALELGNGCDVGAHFGIGTISRFKDRGRAITFAVNLSGKGGSGYQYVYVVDYPLVTGGTWSNFYTQDGVTMSRISTGTYTVGGGDKSRNGLKSSTDLH
Ga0207702_109644731	3300026078	Corn Rhizosphere	MRKALLICAVPLALCMHGPATAKTVSISFDGLCDGMDIIVDKSGHTALETGNGCDEGAHFGAGTVGSIKDRGKAITFGVNLYGKGGGAYQYIYVISYPLVSGSTWSNFYTQDGKTLSKQFTGTYTVTGGAPHAAKGARSSTDVAR
Ga0207702_113842141	3300026078	Corn Rhizosphere	ATAKTVSISFDGLCDGLDIIVNKDTRTALETGNGCDEGAHFGAGTIGRIKNTGNAITFGVNLYAKGGGAYQYIYVISYPLVTGATWSNFYTTDGKTLSKQFTGTYTVNGGARHRTKGLRSSTDRPQ
Ga0207702_118384401	3300026078	Corn Rhizosphere	TPDYEGSKMKRLLLAGAVAVAMLSASNAATANPVSISFDGGCDGMDITVLPQSHIALETGNGCDEGAHFGAGTIGKVKGTGKAITFGINLYGKGGGAYQYIFVISYPLVTGGAWSNFYTQDGKTFVRQYSGTYTVNGAAHHSSNGHRSSTDRIR
Ga0207698_100545944	3300026142	Corn Rhizosphere	TVSISFDKLCDGMDIIVNTATRTALETGNGCDEGAHFGAGTIGRIKVRGNTLTFGVNLYGKGGGAYQYIYVIDYPLVTGASWSNFYTTDGKTLSRITTGTYTVGAAPRRDGLKSSTALH
Ga0209238_10932072	3300026301	Grasslands Soil	MKKMLVLSVAALAMCVGPAATAKTKMVSISFDHACDGMDIILDTTAHTALETGNGCDQGAHFGAGTIGEIKGRGKVITFGVNLYGKGGGAYQYIFVISYPLVTGSTWSNFYTTDGKTLTRDFVGTYTVTGAAARSTKGLRSSTERAR
Ga0209579_100077912	3300027869	Surface Soil	MKTALLASVAALAICAGGAAAAKTTSISFDGFCDGLDIIVNTTDRTALETGNGCDEGAHFGAGTIGKIKGRGNAITFGIDLTPKGGGAYQYIFIVSYPLVTGSTWSEFYTTDGKTIQGRYTGTYTVAGAGAHVTRGPKSSTDRMH
Ga0137415_114557071	3300028536	Vadose Zone Soil	MKRILLSGAAALAMMCAGSAAMATTVSISFDGLCDGLDIAVNKTDRTALETGNGCDEGAHFGAGTVGKIKDRGKTITFGVNLSAKGGGAYQYIYVIDYPLVTGAGWSNFYTLDGKTLSR
Ga0265334_100408932	3300028573	Rhizosphere	MQTKRIFLAAATALTVFCGGAAVAATTVSISFDGLCDGMDISANNFNRTALETGNGCDLGVNFGAGTIAVIKGRGKVITFAVNLSGKGGSAYQYVYVIDYPLVTGGSWTNFYTTDGKTMGKMGGGTYTVSDGTPRKASSLKSSTEQP
Ga0307300_103634291	3300028880	Soil	ISFDGLCDGLDMIVNKDTRMALEVGNGCDEGAHFGAGTVGRIKGQGNAITFGVNLHGKGVDTYQYIFVISYPFVTGGAWSNFYTQDGKTFSRISTGTYTVNGGARHQTKGLPRSTDRPR
Ga0170824_1253403491	3300031231	Forest Soil	HWLAQDAVCLIRLGGNMRGKLGETMNVKRILLLGATVLAMSCAGSGAMAAGTVSISFFGLCDGMDILVNKTTQTALETGNGCDLGANFGAGTIGKIKARGKTITFAVNLSGKGGSAYQYVYVIDYPLVTGGRWTNFYTMDGQTVGKGGGGTYTVGGDPHRKANGLRSSTDLH
Ga0310813_101703482	3300031716	Soil	MKRILLLGTTALAMCAGSATAKTTSISFDGLCDGMDIVVNKTDRTALETGNGCDEGAHFGAGTIGKIKVRGNTITFGVNLSAKGGGAYQYIYVISYPFVTGGTWSNFYTTDGKTMSRQFTGKY
Ga0307469_116972441	3300031720	Hardwood Forest Soil	MKTALLMSAAALAICVGSAAAAKTVSISFDGFCDGLDIIVNKTDRTALEVGNGCDQGAHFGAGTIGKIKGRGNAITFGIDLTPKGGGAYQYIFVVSYPLVTGSTWSEFYTTDGKTLLGQYTGTYTVTSAATRATRGLGSSTDRPHQR
Ga0307516_100219096	3300031730	Ectomycorrhiza	MNAKRILLLGATVLAMSCASSAAMAAGTVSISFFGLCDGMDILVNKTTQTALETGNGCDLGANFGAGTIGKIKARGKTITFAVNLSAKGGSAYQYVYVIDYPLVTGGRWTNFYTMDGKTVGKGGGGTYNVGGDPHRNANGLRSSTDLH
Ga0308175_1005692131	3300031938	Soil	MRKFVITAAVALALCGGPASAKTVSISFDGLCDGMDIIVDKAGHTALETGNGCDEGAHFGAGTIGKIKDRGKVITFGVNLYGKGGGAYQYIYVVSYPLVSGSTWSNFYTQDGKTLSKQFTGTYTVTGTAAPQIKGARSSADRAR
Ga0308175_1007126792	3300031938	Soil	MKKLLLPTAAALALMCAGNAAMAKTKSVSISFDGFCDGLNIVVNTTDRTALETGNGCDDGAHFGAGTIGKIKGRGNAITFGIDLTPKGGGAYQYIFIVDYPVVTGGNWSEFYTTDGKTLQGKFTGTYTVTGGAGHKAQGSLSSTDLAR
Ga0308174_104324832	3300031939	Soil	MKKLLLAGAAAVAMLSASNAAMANPVSISFDGGCDGMDITVLPKSHIALETGNGCDEGAHFGAGTIGKVKGTGKAITFGINLYGKGGGAYQYIFVISYPLVTGGAWSNFYTQDGKTFVRQYSGTYTVNGAAHHSSNGHRSSTDRVR
Ga0308176_117611552	3300031996	Soil	MLCAGHAATAKTKSVSISFDGFCDGLNIVVNTTDRTALETGNGCDDGAHFGAGTIGKIKGRGNAITFGIDLTPKGGGAYQYIFIVDYPVVTGGSWSEFYTTDGKT
Ga0308173_100230442	3300032074	Soil	MKKLLLAGAAAVAMLSASNAAMANPVSISFDGGCDGMDITVLPKSHIALETGNGCDEGAHFGAGTIGKVKGTGKAITFGINLYGKGGGAYQYIFVISYPLVTGGAWSNFYTQDGKTFVRQYSGTYTVNGAAHHSSNGHRSSTDRIR
Ga0307471_1026130851	3300032180	Hardwood Forest Soil	MKVILLVGAAALAMCAASAAVAKTVSISFDGLCDGMDIIVTGTDRTALETGNGCDLGAHFGAGTIGKIKNRGNAITLGVNLSPKGGDAYQYIYVISYPLVTGSSWSNFYTTDGKTLSREFTG
Ga0307471_1041910431	3300032180	Hardwood Forest Soil	PESKRTIEMKIALLLSAAALAMCCAGSAAVAKTVSISFDGLCDGMDIIVNKTGRTALETGNGCDEGAHFGAGTIGRIKGRGNAITLGVNLTAKGGGAYQYIFAISYPLVTGATWSNFYTTDGKTLSREFTGTYTVNSAAWHGTSGLRSSTDLPR
Ga0335080_100970693	3300032828	Soil	MKRVFLLVGVAALALCAGRAAMAETALISFDGLCDGFDIIVNKTNQTALETGNGCDEGANFGAGTIGKIKGTGKAITFGVNLSPKGGSAYQYIFVVQYPLVTGGAWSNFYTQDGKTMSRINSGTYTVNGAAQHAAGETRRSTDRPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097908

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences