Metagenome / Metatranscriptome Family F097799

Basic Information
Family ID	F097799
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	42 residues
Representative Sequence	MAAQIRLPGRAEPLVIPEPGWAATYPPPSSRRVYAAAHVAAV
Number of Associated Samples	90
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	52.43 %
% of genes near scaffold ends (potentially truncated)	98.08 %
% of genes from short scaffolds (< 2000 bps)	87.50 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Most Common Taxonomy
Group	Bacteria (62.500 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.654 % of family members)
Environment Ontology (ENVO)	Unclassified (34.615 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.00% β-sheet: 8.57% Coil/Unstructured: 71.43%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF02894	GFO_IDH_MocA_C	22.12
PF01408	GFO_IDH_MocA	5.77
PF13377	Peripla_BP_3	2.88
PF01627	Hpt	0.96
PF06187	DUF993	0.96
PF00532	Peripla_BP_1	0.96
PF02728	Cu_amine_oxidN3	0.96
PF12323	HTH_OrfB_IS605	0.96
PF13520	AA_permease_2	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0673	Predicted dehydrogenase	General function prediction only [R]	22.12
COG3733	Cu2+-containing amine oxidase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.50 %
Unclassified	root	N/A	37.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.50 %
Unclassified	root	N/A	37.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.50 %
Unclassified	root	N/A	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	24.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	24.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	3.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10280059	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300001418\|JGI20188J14859_1013941	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300001593\|JGI12635J15846_10092549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2185	Open in IMG/M
3300002245\|JGIcombinedJ26739_100666888	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300005181\|Ga0066678_10368805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	949	Open in IMG/M
3300005439\|Ga0070711_100054905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2750	Open in IMG/M
3300005439\|Ga0070711_101582323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	573	Open in IMG/M
3300005537\|Ga0070730_11029405	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300005541\|Ga0070733_10471521	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300005548\|Ga0070665_102430601	Not Available	526	Open in IMG/M
3300005602\|Ga0070762_11254129	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300005610\|Ga0070763_10081606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1600	Open in IMG/M
3300005610\|Ga0070763_10689689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	598	Open in IMG/M
3300005764\|Ga0066903_100909867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1593	Open in IMG/M
3300005921\|Ga0070766_10445066	Not Available	855	Open in IMG/M
3300006175\|Ga0070712_100650375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	896	Open in IMG/M
3300006176\|Ga0070765_101286809	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300009089\|Ga0099828_10204897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1761	Open in IMG/M
3300009089\|Ga0099828_10230792	All Organisms → cellular organisms → Bacteria	1656	Open in IMG/M
3300009792\|Ga0126374_10007008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4138	Open in IMG/M
3300010358\|Ga0126370_11034760	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300010360\|Ga0126372_12442485	Not Available	573	Open in IMG/M
3300010366\|Ga0126379_11348205	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300010376\|Ga0126381_104946851	Not Available	511	Open in IMG/M
3300012206\|Ga0137380_10620432	Not Available	944	Open in IMG/M
3300012929\|Ga0137404_11095830	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300014654\|Ga0181525_10385322	Not Available	769	Open in IMG/M
3300016319\|Ga0182033_10488122	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300016387\|Ga0182040_11951297	Not Available	504	Open in IMG/M
3300016422\|Ga0182039_11938773	Not Available	541	Open in IMG/M
3300017822\|Ga0187802_10003002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4857	Open in IMG/M
3300017823\|Ga0187818_10025810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2516	Open in IMG/M
3300017933\|Ga0187801_10023553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2113	Open in IMG/M
3300017970\|Ga0187783_11298467	Not Available	524	Open in IMG/M
3300017973\|Ga0187780_10345461	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300017975\|Ga0187782_10725406	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300018060\|Ga0187765_11359481	Not Available	505	Open in IMG/M
3300018482\|Ga0066669_10061089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2440	Open in IMG/M
3300020581\|Ga0210399_11576702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	507	Open in IMG/M
3300021086\|Ga0179596_10347097	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300021402\|Ga0210385_11089701	Not Available	613	Open in IMG/M
3300021406\|Ga0210386_10026967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4501	Open in IMG/M
3300021406\|Ga0210386_10538612	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300021406\|Ga0210386_11085163	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300021407\|Ga0210383_11555781	Not Available	545	Open in IMG/M
3300022557\|Ga0212123_10437898	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300025464\|Ga0208076_1027687	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300025928\|Ga0207700_10048043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3166	Open in IMG/M
3300026361\|Ga0257176_1089006	Not Available	507	Open in IMG/M
3300027067\|Ga0208602_1029441	Not Available	539	Open in IMG/M
3300027110\|Ga0208488_1006060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2459	Open in IMG/M
3300027725\|Ga0209178_1401298	Not Available	521	Open in IMG/M
3300027824\|Ga0209040_10519129	Not Available	525	Open in IMG/M
3300027855\|Ga0209693_10030320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2634	Open in IMG/M
3300027875\|Ga0209283_10298766	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300027884\|Ga0209275_10451115	Not Available	729	Open in IMG/M
3300027884\|Ga0209275_10569028	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300028563\|Ga0265319_1046943	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300028808\|Ga0302228_10066655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1714	Open in IMG/M
3300028877\|Ga0302235_10304191	Not Available	689	Open in IMG/M
3300030007\|Ga0311338_11207893	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300030399\|Ga0311353_11734823	Not Available	501	Open in IMG/M
3300030524\|Ga0311357_10369068	All Organisms → cellular organisms → Bacteria	1361	Open in IMG/M
3300030578\|Ga0210275_10372452	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300030618\|Ga0311354_10392993	All Organisms → cellular organisms → Bacteria	1402	Open in IMG/M
3300031543\|Ga0318516_10662773	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300031544\|Ga0318534_10136679	All Organisms → cellular organisms → Bacteria	1412	Open in IMG/M
3300031544\|Ga0318534_10325249	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300031544\|Ga0318534_10632702	Not Available	607	Open in IMG/M
3300031546\|Ga0318538_10262264	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300031546\|Ga0318538_10727114	Not Available	538	Open in IMG/M
3300031715\|Ga0307476_10657482	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300031736\|Ga0318501_10754718	Not Available	538	Open in IMG/M
3300031744\|Ga0306918_11178572	Not Available	592	Open in IMG/M
3300031764\|Ga0318535_10443641	Not Available	578	Open in IMG/M
3300031769\|Ga0318526_10126907	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300031771\|Ga0318546_10478773	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300031781\|Ga0318547_10587865	Not Available	690	Open in IMG/M
3300031796\|Ga0318576_10580170	Not Available	528	Open in IMG/M
3300031823\|Ga0307478_10223007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1524	Open in IMG/M
3300031835\|Ga0318517_10213138	Not Available	871	Open in IMG/M
3300031846\|Ga0318512_10512880	Not Available	608	Open in IMG/M
3300031879\|Ga0306919_10657801	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300031890\|Ga0306925_11815622	Not Available	583	Open in IMG/M
3300031893\|Ga0318536_10077482	All Organisms → cellular organisms → Bacteria	1644	Open in IMG/M
3300031945\|Ga0310913_10151875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1601	Open in IMG/M
3300031946\|Ga0310910_10441700	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300031947\|Ga0310909_10201878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1653	Open in IMG/M
3300031947\|Ga0310909_11686603	Not Available	501	Open in IMG/M
3300031954\|Ga0306926_10619914	All Organisms → cellular organisms → Bacteria	1319	Open in IMG/M
3300031954\|Ga0306926_12425648	Not Available	577	Open in IMG/M
3300031962\|Ga0307479_10858033	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300031962\|Ga0307479_11926524	Not Available	541	Open in IMG/M
3300031981\|Ga0318531_10473832	Not Available	567	Open in IMG/M
3300032043\|Ga0318556_10564865	Not Available	594	Open in IMG/M
3300032044\|Ga0318558_10423371	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300032044\|Ga0318558_10572220	Not Available	564	Open in IMG/M
3300032044\|Ga0318558_10593463	Not Available	553	Open in IMG/M
3300032054\|Ga0318570_10582490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	510	Open in IMG/M
3300032076\|Ga0306924_11298125	Not Available	782	Open in IMG/M
3300032893\|Ga0335069_12263834	Not Available	567	Open in IMG/M
3300032896\|Ga0335075_10664200	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300033290\|Ga0318519_10036413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2368	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.08%
Host-Associated	Host-Associated	1.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.31%
Aquatic	Environmental → Aquatic	5.77%
Plants	Host-Associated → Plants	1.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.54%
Peat	Environmental → Terrestrial → Peat	5.77%
Freshwater	Environmental → Aquatic → Freshwater	4.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.92%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.42%
Loam	Environmental → Terrestrial → Soil → Loam	16.35%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.77%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.92%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	46.15%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.85%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.92%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.92%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.65%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.77%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.88%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.92%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.92%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.96%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.96%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001418	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025464	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300027067	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF007 (SPAdes)	Environmental	Open in IMG/M
3300027110	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028563	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG	Host-Associated	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030578	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO105-VCO054SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_102800591	3300001356	Peatlands Soil	VQIRLPGRDGLFDIPSAGWAERYPPPTSRRVYAAAH
JGI20188J14859_10139411	3300001418	Arctic Peat Soil	MGTLVRLPGRAQPVAIPDPPWAAGYPPPASRRVFAAAH
JGI12635J15846_100925493	3300001593	Forest Soil	MTERISLPGRAEPLEIDPPGWAAGYPPPVSRRAYAA
JGIcombinedJ26739_1006668881	3300002245	Forest Soil	MTARIRLPGRPDPLLIPAPSWAGCYSRPASRRVYAAAH
Ga0066678_103688051	3300005181	Soil	MTALIRLPGRARPLVVPDPGWAAGYPAPVSRRVFAAAHVAAHRAAGGREA
Ga0070711_1000549053	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VTARIRLPGRPGPLDIPDPPWARSHPAPTSRRVFAAAHVAAFPDGSI
Ga0070711_1015823232	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MAAQIRLPGRAEPLVIPEPGWAATYPPPSSRRVYAAAHVAAV
Ga0070730_110294051	3300005537	Surface Soil	VPAQIRLPGRDRPLVIPEPGWAGRYPPPRCRRVFAAAHVA
Ga0070733_104715211	3300005541	Surface Soil	VTARISLPGRAEPLEVTGPAWAASYPPPASRRVYAAAHVASVDG
Ga0070665_1024306012	3300005548	Switchgrass Rhizosphere	VTARIRLPGRPGPLDIPDPPWARSHPAPTSRRVFAAAH
Ga0070762_112541292	3300005602	Soil	VSGTAQIRLPGHKEPLTVSAPGWAASYPPPASRRVY
Ga0070763_100816063	3300005610	Soil	VAAQVQLPGRDEPLVIPEPGWAASYPPPVSRRVFAAAHVAAR
Ga0070763_106896892	3300005610	Soil	VPSNGPAQILLPGRAPEAGPLVIPEPGWAAGYPPPTRRKVFAAAHVAASPSP
Ga0066903_1009098674	3300005764	Tropical Forest Soil	MTVHIRLPGRAEPLAIPEPGWARRYLPPVSRRVYAAAHVAARPAADGKR
Ga0070766_104450661	3300005921	Soil	MSELTAQLWLPGRSEPLIVPEPGWTACYPPPVSRRVYAAAHVA
Ga0070712_1006503751	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VVTARIRLPGRASPLAVPEPGWAAGYPPPRSRRVFAAAHVAAAPGPGG
Ga0070765_1012868092	3300006176	Soil	MSAQILLPGRAEPLDVPDPGWAAGYPAPTRRSVYAAAHVA
Ga0099828_102048973	3300009089	Vadose Zone Soil	VPAQIRLPGRDRPLVIPEPGWAGRYPPPRRRRVFAAAHVAAAPDGRVDW
Ga0099828_102307923	3300009089	Vadose Zone Soil	MTARIRLPGRPDPLLIPAPSWAGCYSRPASRRVYAAAHVAA
Ga0126374_100070084	3300009792	Tropical Forest Soil	MAAQIRLPGRAEPLVIPEPGWTATYPPPSSRRVYAAAHVAAAPVAARRGDIEID*
Ga0126370_110347601	3300010358	Tropical Forest Soil	MTAQIRLPGRAEPLVIPAPGWAASHSPLTARRAYAAAHVAASPVAGR
Ga0126372_124424851	3300010360	Tropical Forest Soil	MNTEIRLPGRAEPLLITEPGWARGYPPPVSRRVYAAAH
Ga0126379_113482051	3300010366	Tropical Forest Soil	MTVTAQIRLPGRREPLRIADPGWDSREARGYPPPASRSVYAAAHV
Ga0126381_1049468511	3300010376	Tropical Forest Soil	MAAQIRLPGRAEPLVVPEPGWAATYPPPSSRRVYAAAHVAAVPA
Ga0137380_106204322	3300012206	Vadose Zone Soil	VPAEIRLPGRDRPLVIPEPGWADHYPPPRRRRVFAAAHVAAAPDGCVDWE
Ga0137404_110958301	3300012929	Vadose Zone Soil	MAARIMLPGRAEPLEITPPGWAPGYPPPVSRRVYAAAHVA
Ga0181525_103853221	3300014654	Bog	VAAQVWLPGRDEPLLIPEPGWAASYPPPASRRVFAAAHVAARPASGQPGAGRR
Ga0182033_104881222	3300016319	Soil	VSALIRLPGRAAPLAVPEPGWAAGYPAPRSRRVFAAAHVAAAPGPDGRPV
Ga0182040_119512971	3300016387	Soil	LAAQIRLPGRDRPSVIPEPGWAASYPPPRCRRVFAAAHVAASPDGAID
Ga0182039_119387731	3300016422	Soil	MTAQIRLPGRAGPLTVPDPGWAEGYPAPVSRRVFAAAHVAAR
Ga0187802_100030021	3300017822	Freshwater Sediment	VAVQIRLPGRDGLLEIPSPGWACCYPPPASRRVYAAAHIAARP
Ga0187818_100258101	3300017823	Freshwater Sediment	VAVRIRLPGRDGLLEIPSPGWACCYPPPASRRVYAAAHVAAR
Ga0187801_100235531	3300017933	Freshwater Sediment	VAVRIRLPGRDGLLEIPSPGWACCYPPPASRRVYAAAHVAA
Ga0187783_112984671	3300017970	Tropical Peatland	VAAQIRLPGRAAPLDIPEPGWAASYPPPTSRRVYAAAHV
Ga0187780_103454611	3300017973	Tropical Peatland	VNKQVQIALPGRPAPLVIPEPGWAAGYPPPVRRKVFAA
Ga0187782_107254061	3300017975	Tropical Peatland	MTAQIRLPGRPGPLLIADPGWARGYPPPVSRSAYAAA
Ga0187765_113594812	3300018060	Tropical Peatland	MTAQIRLPGRREPLLIPDPGWGSDGARGYPPPVSRSAY
Ga0066669_100610891	3300018482	Grasslands Soil	MTALIRLPGRARPLVVPDPGWAAGYPAPVSRRVFAAAHV
Ga0210399_115767022	3300020581	Soil	MTPRISLPGRAEPLEVAAPSWAPGYPPPASRRVYAAAHVASVDGGD
Ga0179596_103470972	3300021086	Vadose Zone Soil	MTARIRLPGRPDPLLIPAPSWAGCYSRPASRRVYAAAHVAASPDG
Ga0210385_110897011	3300021402	Soil	MKGDGATIRLPGRPEPLLVAEPPWERRYPPPVSRSVYAAAHVAATPD
Ga0210386_100269675	3300021406	Soil	MAARIMLPGRAEPLEISSPGWAPGYRPPVSRRVYAAAHVA
Ga0210386_105386121	3300021406	Soil	MAAGARILLPGRSEALTVTSPSWATSYPSPSSRRVYAAAHVAARSGG
Ga0210386_110851632	3300021406	Soil	MGILVSLPGRAQPVAIPDPPWAAGYPPPASRSVFAA
Ga0210383_115557812	3300021407	Soil	VPSNGTARIQLPGRVPGSGPLVIPKPGWAAGYPPPARRKVFAAAHV
Ga0212123_104378982	3300022557	Iron-Sulfur Acid Spring	MLPGRAEPLDIPPPGWAPGYPPPASRRVYAAAHVASQ
Ga0208076_10276872	3300025464	Arctic Peat Soil	MGARVSLPGRTQPVDIPDPPWAAGYPPPSSRRVYAAAHVAA
Ga0207700_100480433	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MAAQIRLPGRAEPLVIPEPGWALSYPPPRSRRVYAAAHVAAAPVTAA
Ga0257176_10890061	3300026361	Soil	VSAAIRLPGRREPLLIADPGWDRGYPPPVSRSVYAAAHVAARPSG
Ga0208602_10294412	3300027067	Forest Soil	MTASIALPDRAAPLEITPPAWAAGYPPPVSRRVYAAAH
Ga0208488_10060601	3300027110	Forest Soil	VQIRLPGRAEPVVVPEPGWAGCYPPPVSRRVYAAAH
Ga0209178_14012981	3300027725	Agricultural Soil	VSARITLPGRAAPLDITAPTWAASYPPPASRRVYAAAH
Ga0209040_105191291	3300027824	Bog Forest Soil	MSAQIVLPGRAEPLDVLEPGWAAGYPPPARRSVYAAAHVAANHDGS
Ga0209693_100303201	3300027855	Soil	VSRQIQLPGRDEPLVIPEPGWAASYPPPVSRRVFAAAHVAARPGAARPG
Ga0209283_102987662	3300027875	Vadose Zone Soil	MTARIRLPGRPDPLLIPAPSWAGCYSRPASRRVYA
Ga0209275_104511152	3300027884	Soil	VSRQIQLPGRDEPLVIPEPGWAASYPPPVSRQVFAAAHVAARPASG
Ga0209275_105690281	3300027884	Soil	MSAGISLPGRAAPLEIAPPGWAAAYPPPASRRVYAAAHVASVDS
Ga0265319_10469431	3300028563	Rhizosphere	MTARISLPGRAEPLEVAAAAWAASYPPPTSRRAYAAAHVASVD
Ga0302228_100666551	3300028808	Palsa	VAAQVLLPGRDEPLVIPEPGWETSYPPPVSRRVFAAAHVAARPGP
Ga0302235_103041911	3300028877	Palsa	MSEVAAQVWLPGRDEPLVIPEPGWAASYPPPVSRRVFAAAH
Ga0311338_112078932	3300030007	Palsa	VTAQIRLPGRAEPLLVADPAWAASYPPPASRRAYAA
Ga0311353_117348232	3300030399	Palsa	MIRQIQLPGRDKPLVIPEPGWAASYPPPVSRRVFAAAHVAARPA
Ga0311357_103690682	3300030524	Palsa	MTARIALPGRAEPLEITRPAWAGAYPPPASRRVYAAAH
Ga0210275_103724521	3300030578	Soil	MTASIRLPGRPGLLEVPEPSWPAGHPAPRSRRVYAAPHVAA
Ga0311354_103929932	3300030618	Palsa	VSARIALPGRAEPLEIAPPGWAAGYPPPASRRVYAA
Ga0318516_106627731	3300031543	Soil	VTAQIRLPGRAEPLEIPEPGWASSYPPPSSRRVFAAAHVAAVS
Ga0318534_101366792	3300031544	Soil	VPALIRLPGRDGPLVIPSPRWAAGYPAPARRKVFAAAHV
Ga0318534_103252492	3300031544	Soil	VTVQIRLPGRPGPLAIPAPGWAPAYPPPASRRVFAAAHV
Ga0318534_106327021	3300031544	Soil	MTAQIRLPGRAGPLTIPDPGWAERYPAPVSRRVFAAAHV
Ga0318538_102622642	3300031546	Soil	MTAQIRLPGRREPLLIADPGWGSRGARGYPPPVSRSVYAAAH
Ga0318538_107271141	3300031546	Soil	MTAQIRLPGRREPLLIADPGWARGYPPPVSRSVYAAAHVAAY
Ga0307476_106574821	3300031715	Hardwood Forest Soil	VTAQIRLPGRVLGPLVIPEPGWAAGYPPPARRKVFAAAHVAASPSPAAGGGGD
Ga0318501_107547181	3300031736	Soil	MQIQLPGRPTPLVVPAHGWAPAYPPPASRRVFAAAHVAA
Ga0306918_111785722	3300031744	Soil	VSALIRLPGRAAPLAVPEPGWAAGYPAPRSRRVFAAAHVAAAPGPD
Ga0318535_104436412	3300031764	Soil	VPALIRLPGRDGPLVIPSPRWAAGYPAPARRKVFAAAHVAAK
Ga0318526_101269072	3300031769	Soil	MSEVAVQIRLPGRAEPLVIPEPGWAVSYPPPASRRVYAAAHVAAAPGAGAGA
Ga0318546_104787731	3300031771	Soil	VTAQIRLPGRAEPLEIPEPGWASSYLPPSSRRVFAAGQPD
Ga0318547_105878652	3300031781	Soil	MAAQIRLPGRAEPLEIPEPGWASSYPPPSSRRVFAAAHVAAVS
Ga0318576_105801701	3300031796	Soil	MTAEIRLPGRREPLLIADPGWDSRGARGYPPPVSRSVYA
Ga0307478_102230073	3300031823	Hardwood Forest Soil	MSAAVSLPGRQAPFEITRPAWAAGYPPPVSRRVFAAAHV
Ga0318517_102131382	3300031835	Soil	MPEMTVQIRLPGRPGPLAVPAPGWAPAYPSPSSRRV
Ga0318512_105128801	3300031846	Soil	MTAQIRLPGRREPLLIADPGWGSRGARGYPPPVTRSVYAAAHVAAYT
Ga0306919_106578011	3300031879	Soil	MAAQIRLPGRAEPLVIPEPEWAATYPPPSSRRVYAAAHVAAAPVVTH
Ga0306925_118156222	3300031890	Soil	VAAQIRLPGRAEPLVVPEPGWAASYPPPLSRRVYAAAHVAAAPVAAHRAAA
Ga0318536_100774821	3300031893	Soil	MAAQIRLPGRAEPLVIPEPGWAATYPPPSSRRVYAAAHVAAGVGIGID
Ga0318520_102087662	3300031897	Soil	VQIQLPGRAGPLVIPAPPWAPGYRPPTSRRVWAAAHVAAVGG
Ga0310913_101518753	3300031945	Soil	MTVQIRLPGRPGPLAVPAPGWAPAYPPPASRRVFAAA
Ga0310910_104417001	3300031946	Soil	MTAQIRMPGRAGPLTVPDPGWAEGYPAPVSRRVFAAAHVAAR
Ga0310909_102018783	3300031947	Soil	VSALIRLPGRAAPLAVPEPGWAAGYPAPRSRRVFAAAHVAAAPG
Ga0310909_116866032	3300031947	Soil	MTAQIRLPGRREPLLIADPGWGSRGARGYPPPVTRSVYA
Ga0306926_106199142	3300031954	Soil	LTAQIWLPGRDARSGPLVILEPGWAACYRPPACRRVYAAAHVAASPGSDGEVID
Ga0306926_124256482	3300031954	Soil	VTAQVWLPGRTEPFVIPEPDWAARYPPPAFRRVYAAAH
Ga0307479_108580331	3300031962	Hardwood Forest Soil	MAVQIRLPGRAELLEIPSPDWALRYPPPTSRRVYAAAHVAARPGPVGEVI
Ga0307479_119265242	3300031962	Hardwood Forest Soil	VAAQMRLPGRAEPLEINDPGWAASYPPPASRRVFAAAHVAATPDV
Ga0318531_104738321	3300031981	Soil	VSALIRLPGRAAPLAVPEPGWAAGYPAPRSRRVFAAA
Ga0318556_105648652	3300032043	Soil	VTAQVWLPGRTEPFVIPEPDWAARYPPPAFRRVYAAAHVAASPGRD
Ga0318558_104233711	3300032044	Soil	MTAQIRLPGRREPLLIADPGWGSRGARGYPPPVTRSVYAAAHVAARPG
Ga0318558_105722202	3300032044	Soil	VQIRLPGRPGPLAVPAPGWAPAYPPPASRRVFAAA
Ga0318558_105934632	3300032044	Soil	MTAQIRLPGRREPLLIADPGWGSHGARGYPPPVSRSAYAAAHV
Ga0318570_105824902	3300032054	Soil	MPEMTVQIRLPGRPGPLAVPAPGWAPAYPSPASRRVFAAAHVAAVG
Ga0306924_112981251	3300032076	Soil	MPKVAAAIQLPGRAGPLVISPPPWAPGYPPPASRRVWAAA
Ga0335069_122638341	3300032893	Soil	MTATIVLPGRAEPLEITAPGWAAGYPQPVSRRVYAAAHV
Ga0335075_106642002	3300032896	Soil	VAATIRLPGRDQPLVIPAPGWARSYPPPSLRRVYAAAHVAALDADTVDWD
Ga0318519_100364131	3300033290	Soil	MTVQIRLPGRPGPLAVPAPGWAPAYPSPASRRVFAAAHVAAVGG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097799

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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