Metagenome / Metatranscriptome Family F097792

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097792
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	83 residues
Representative Sequence	AIALFIAWWVLPTPAEIARLRTERDELASNIAVLNQRGARADLRRCGAGRVCVRVDLSAPRYGESSDYMVIKGY
Number of Associated Samples	86
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.94 %
% of genes near scaffold ends (potentially truncated)	94.23 %
% of genes from short scaffolds (< 2000 bps)	91.35 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.038 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.577 % of family members)
Environment Ontology (ENVO)	Unclassified (43.269 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.885 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.37% β-sheet: 16.67% Coil/Unstructured: 51.96%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF10387	DUF2442	21.15
PF00589	Phage_integrase	1.92
PF13098	Thioredoxin_2	0.96
PF01895	PhoU	0.96
PF03965	Penicillinase_R	0.96
PF01695	IstB_IS21	0.96
PF00829	Ribosomal_L21p	0.96
PF12728	HTH_17	0.96
PF13103	TonB_2	0.96
PF00578	AhpC-TSA	0.96
PF13711	DUF4160	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0261	Ribosomal protein L21	Translation, ribosomal structure and biogenesis [J]	0.96
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.96
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.96
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.04 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.04 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.04 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	96.15 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	93.27 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	87.50 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	87.50 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %
Unclassified	root	N/A	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104585595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	648	Open in IMG/M
3300000789\|JGI1027J11758_11353312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	592	Open in IMG/M
3300005174\|Ga0066680_10646955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	656	Open in IMG/M
3300005178\|Ga0066688_10215624	All Organisms → cellular organisms → Bacteria → Proteobacteria	1222	Open in IMG/M
3300005180\|Ga0066685_10934881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	577	Open in IMG/M
3300005187\|Ga0066675_10772742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	724	Open in IMG/M
3300005363\|Ga0008090_14348628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	545	Open in IMG/M
3300005591\|Ga0070761_11066376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	514	Open in IMG/M
3300006175\|Ga0070712_100873589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	774	Open in IMG/M
3300006800\|Ga0066660_10462584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1062	Open in IMG/M
3300009012\|Ga0066710_100226172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2687	Open in IMG/M
3300010046\|Ga0126384_11053349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	743	Open in IMG/M
3300010048\|Ga0126373_11119036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	853	Open in IMG/M
3300010048\|Ga0126373_11403856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	764	Open in IMG/M
3300010303\|Ga0134082_10458018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	552	Open in IMG/M
3300010337\|Ga0134062_10510437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	606	Open in IMG/M
3300010360\|Ga0126372_11919593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	637	Open in IMG/M
3300010366\|Ga0126379_11479617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	785	Open in IMG/M
3300010371\|Ga0134125_11079234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	879	Open in IMG/M
3300010398\|Ga0126383_11082009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	891	Open in IMG/M
3300010398\|Ga0126383_11250341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	832	Open in IMG/M
3300012917\|Ga0137395_10433209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	944	Open in IMG/M
3300012927\|Ga0137416_10664504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	913	Open in IMG/M
3300012971\|Ga0126369_10736358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1065	Open in IMG/M
3300012971\|Ga0126369_12442990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	608	Open in IMG/M
3300014166\|Ga0134079_10089430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1157	Open in IMG/M
3300015245\|Ga0137409_11407484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	543	Open in IMG/M
3300016270\|Ga0182036_10634801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	859	Open in IMG/M
3300016270\|Ga0182036_10937870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	711	Open in IMG/M
3300016294\|Ga0182041_10490471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1063	Open in IMG/M
3300016319\|Ga0182033_11929743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	537	Open in IMG/M
3300016341\|Ga0182035_10405492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1147	Open in IMG/M
3300016357\|Ga0182032_11280559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	632	Open in IMG/M
3300016404\|Ga0182037_10312955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1266	Open in IMG/M
3300016404\|Ga0182037_11026075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	719	Open in IMG/M
3300016445\|Ga0182038_10512681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1024	Open in IMG/M
3300017972\|Ga0187781_10554517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	827	Open in IMG/M
3300017972\|Ga0187781_10947563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	628	Open in IMG/M
3300018058\|Ga0187766_11041943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	584	Open in IMG/M
3300018064\|Ga0187773_11030110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	541	Open in IMG/M
3300018064\|Ga0187773_11195816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	511	Open in IMG/M
3300018085\|Ga0187772_10447154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	905	Open in IMG/M
3300018089\|Ga0187774_10001530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	8153	Open in IMG/M
3300021171\|Ga0210405_10339220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1186	Open in IMG/M
3300021180\|Ga0210396_11722885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	509	Open in IMG/M
3300021439\|Ga0213879_10159106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	659	Open in IMG/M
3300021478\|Ga0210402_10329585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1415	Open in IMG/M
3300021559\|Ga0210409_10570211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	999	Open in IMG/M
3300021560\|Ga0126371_11847972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	724	Open in IMG/M
3300025915\|Ga0207693_10712899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	777	Open in IMG/M
3300026325\|Ga0209152_10206921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	737	Open in IMG/M
3300026333\|Ga0209158_1177782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	765	Open in IMG/M
3300026547\|Ga0209156_10279058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	762	Open in IMG/M
3300027591\|Ga0209733_1009378	All Organisms → cellular organisms → Bacteria	2559	Open in IMG/M
3300027867\|Ga0209167_10129303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1313	Open in IMG/M
3300029636\|Ga0222749_10339567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	784	Open in IMG/M
3300031545\|Ga0318541_10875230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	501	Open in IMG/M
3300031564\|Ga0318573_10513472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	645	Open in IMG/M
3300031572\|Ga0318515_10446929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	691	Open in IMG/M
3300031573\|Ga0310915_10414366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	957	Open in IMG/M
3300031668\|Ga0318542_10185248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1046	Open in IMG/M
3300031679\|Ga0318561_10420615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	735	Open in IMG/M
3300031680\|Ga0318574_10139929	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300031680\|Ga0318574_10574335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	661	Open in IMG/M
3300031681\|Ga0318572_10674280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	616	Open in IMG/M
3300031715\|Ga0307476_10081385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2260	Open in IMG/M
3300031715\|Ga0307476_11185977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	559	Open in IMG/M
3300031748\|Ga0318492_10202675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1016	Open in IMG/M
3300031753\|Ga0307477_10636125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	717	Open in IMG/M
3300031763\|Ga0318537_10210589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	723	Open in IMG/M
3300031797\|Ga0318550_10481767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	599	Open in IMG/M
3300031831\|Ga0318564_10224420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	835	Open in IMG/M
3300031846\|Ga0318512_10645129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	541	Open in IMG/M
3300031879\|Ga0306919_10029760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3428	Open in IMG/M
3300031890\|Ga0306925_10519122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1267	Open in IMG/M
3300031912\|Ga0306921_11843688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	649	Open in IMG/M
3300031942\|Ga0310916_10076388	All Organisms → cellular organisms → Bacteria	2635	Open in IMG/M
3300031942\|Ga0310916_11414986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	569	Open in IMG/M
3300031947\|Ga0310909_10544672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	971	Open in IMG/M
3300031947\|Ga0310909_10545584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	970	Open in IMG/M
3300031947\|Ga0310909_10724786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	825	Open in IMG/M
3300031947\|Ga0310909_10890589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	731	Open in IMG/M
3300031947\|Ga0310909_11252756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	598	Open in IMG/M
3300031959\|Ga0318530_10355986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	606	Open in IMG/M
3300031962\|Ga0307479_11396054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	659	Open in IMG/M
3300031981\|Ga0318531_10311161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	712	Open in IMG/M
3300032001\|Ga0306922_12249012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	524	Open in IMG/M
3300032035\|Ga0310911_10699450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	587	Open in IMG/M
3300032064\|Ga0318510_10368672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	608	Open in IMG/M
3300032067\|Ga0318524_10269291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	878	Open in IMG/M
3300032067\|Ga0318524_10711793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	530	Open in IMG/M
3300032068\|Ga0318553_10632275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	560	Open in IMG/M
3300032068\|Ga0318553_10715204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	524	Open in IMG/M
3300032089\|Ga0318525_10243478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	924	Open in IMG/M
3300032090\|Ga0318518_10220985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	971	Open in IMG/M
3300032770\|Ga0335085_11182527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	814	Open in IMG/M
3300032770\|Ga0335085_11763302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	636	Open in IMG/M
3300032783\|Ga0335079_10022624	All Organisms → cellular organisms → Bacteria → Proteobacteria	7193	Open in IMG/M
3300032897\|Ga0335071_12131687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	503	Open in IMG/M
3300032955\|Ga0335076_10038836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4761	Open in IMG/M
3300033004\|Ga0335084_11619122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	638	Open in IMG/M
3300033290\|Ga0318519_10940952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	535	Open in IMG/M
3300033808\|Ga0314867_094635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	695	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.46%
Loam	Environmental → Terrestrial → Soil → Loam	3.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	51.92%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.23%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.46%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.92%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.62%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.73%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.92%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.96%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.96%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.96%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033808	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1045855951	3300000364	Soil	QIQRALVDALKTVHTEAQRAVEALQGIRREANAHVALWTLGLTVISIAIALFIAWWVLPTRAEIARLRSERDELVSNIAALNQRGARADLRRCGAGRVCVRVDLSAPRYGESSDYMVVKGY*
JGI1027J11758_113533122	3300000789	Soil	ALKTVHTEAQRAVEALQGIRREANAHVALWTLGLTVISIAIALFIAWWVLPTRAEIARLRSERDELVSNIAALNQRGARADLRRCGAGRVCVRVDLSAPRYGESSDYMVVKGY*
Ga0066680_106469552	3300005174	Soil	AIALFVAWWVLPTPREIARLRIERDELVSNIAILNQRGARADLRRCGTGRVCVRVDLSAPRYGESSDYMVIKGY*
Ga0066688_102156244	3300005178	Soil	LRTERDELASNIAILNQRGAHADLRRCGAGRMCVRVDLSAPRYGESSDYMVIKGY*
Ga0066685_109348812	3300005180	Soil	VLPTPAEISRLRTERDELASNIAILNQRGAHADLRRCGAGRMCVRVDLSAPRYGESSDYMVIKGY*
Ga0066675_107727421	3300005187	Soil	LTATSVAIALFVAWWVLPTPREIARLRIERDELASNIAILNQRGARADLRRCGAGRVCVRVDLSAPRYGESSDYLVIRGY*
Ga0008090_143486281	3300005363	Tropical Rainforest Soil	TLVDALKTVNTETQRAVEALQKIKREANARVTLWTLGLTVISAAIALFIAWWVLPTPAEVARLRTERDELSSNLAVLNQRGARADLRRCGTGRVCVRVDLSAPRYGESSDYMVIKGY*
Ga0070761_110663762	3300005591	Soil	ANVRVTLWTLGLTVISTAIALFIAWWVLPTRAEISRLRTERDELASNIAVLNQRGARADLRRCGAGRVCVRVDLSAPRYGQSSDYVVIKGY*
Ga0070712_1008735891	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	HVETRGAIEALHRVKRAANARVMLCTLGLTALSAGVGLFVAWWVLPTRAEIAVLRSERDELASNIAVLNERGAWADVRRCGKGQLCVRVDLKAPRYGESSDYLLLKRY*
Ga0066660_104625841	3300006800	Soil	ALQKVKQAANARVTLWTLAVTATSVAIALFVAWWVLPTPREIARLRIERDELASNIAILNQRGARADLRRCGAGRVCVRVDLSAPRYGESSDYMVIKGY*
Ga0066710_1002261726	3300009012	Grasslands Soil	QKIKRAANARVTLWTLGLTATSAAIALFVAWWVLPTPREIARLRIERDELVSNIAVLNQRGARADLRRCGTGRVCVRVDLSAPRYGESSDYMVIKGY
Ga0126384_110533491	3300010046	Tropical Forest Soil	LTVISVAIALFIAWWVLPTPAEIARLRTERDELASNIAVLSQRGARADLRRCGAGRVCVRVDLSAPRYGESSDYMVIKGY*
Ga0126373_111190363	3300010048	Tropical Forest Soil	RLRTERDELVSNIAALNQRGARADLRRCGAGRVCVRVDLSAPRYGKSSDYMVVKGY*
Ga0126373_114038561	3300010048	Tropical Forest Soil	QRAVEALQRIKREANARVTLWTLGLTVISVAIALFVAWWVLPTPAEIARLRIERDELASNITVLNQRGARADVRRCGAGHLCVRVDLSAPRYGESSDYLVIKGY*
Ga0134082_104580182	3300010303	Grasslands Soil	SAAIALFVAWWVLPTPAEISRLRTERDELASNIAILNQRGAHADLRRCGAGRMCVRVDLSAPRYGESSDYMVIKGY*
Ga0134062_105104372	3300010337	Grasslands Soil	VDALKTVHAESQRAVDALQKIKRAANARVTLWTLGLTATSAAIALFVAWWVLPTPREIARLRIERDELVSNIAVLNQRGARADLRRCGTGRVCVRVDLSAPRYGESSDYMVIKGY*
Ga0126372_111334771	3300010360	Tropical Forest Soil	ERDELVSNIAALNHRGARADLRRCGAGRVCVRVDLSAPRYGESSDYMVVKGY*
Ga0126372_119195932	3300010360	Tropical Forest Soil	AIALFIAWWVLPTPAEIARLRTERDELASNIAVLNQRGARADLRRCGAGRVCVRVDLSAPRYGESSDYMVIKGY*
Ga0126379_114796172	3300010366	Tropical Forest Soil	IALLVAWWVLPTPAEIARLRAERDELASNIAALNQRGARADLRRCGTERVCVRVDLTAPRYGESSDYLVIKGY*
Ga0134125_110792341	3300010371	Terrestrial Soil	LTVISVAIALFVAWSVLPTPAEIARLRTERDELASNIAVLNQRGARADLRRCGAGRVCVRVDLSAPRYGASSDYLVIKGY*
Ga0126383_110820091	3300010398	Tropical Forest Soil	LQRIRREANAHVALWTLGLTVISIAIALFIAWWVLPTQAEIARLRTERDELVSNIAALNHRGARADLRRCGAGRVCVRVDLSAPRYGESSDYMVVKGY*
Ga0126383_112503413	3300010398	Tropical Forest Soil	WVLPTPAEIARLRTERDELAGNIAALNQRGARADLRRCGAGRVCVRVDLSAPRYGESSDYMVIKGY*
Ga0137395_104332093	3300012917	Vadose Zone Soil	ARVMLWTLGLTATSAAIALFVAWWVLPTAAEIARLRTERDELASNIAVLNQRGARADLRRCGAGRVCVRVDVGAPRYGDSSDYLVIKGY*
Ga0137416_106645041	3300012927	Vadose Zone Soil	HAESQRAVDALQKIKRAANARVTLWTLGLTATSAAIALFVAWWVLPTPAEIARLRTERDELVSNIAVLNQRGARADLRRCGAGRVCVRVDLSAPRYGESSEYLVIKGY*
Ga0126369_107363584	3300012971	Tropical Forest Soil	EIARLRTERDELVSNLAALNQRGARADLRRCGAGRVCVRVDLSAPRYGESSDYMVIKGY*
Ga0126369_124429901	3300012971	Tropical Forest Soil	NTHVALWTLGLTVVSAAIALFIAWWVLPTQAEIARLRTERDELVSNIAALNQRGARADLRRCGTERVCVRVDLTAPRYGESSDYLVIKGY*
Ga0134079_100894302	3300014166	Grasslands Soil	VHAEAQRAVDALQKIKRAANARVTLWTLGLTATSAAIALFVAWWVLPTPREIARLRIERDELVSNIAVLNQRGARADLRRCGTGRVCVRVDLSAPRYGESSDYMVIKGY*
Ga0137409_114074841	3300015245	Vadose Zone Soil	KRAANARTTFWTLGVTAIAFGVALFVAWWVLPTPAEIAALRTERDALTSNVAVLTQRGARADVRRCGTGRLCVRVDLKAPRYGESSDYLVIRGY*
Ga0182036_106348011	3300016270	Soil	NARVTLWTLGLTVISAAIALFVAWWVLPTPAEIARLRTERDQLASNVAVLNQRGARADLRRCGAGRVCVRVDLSAPRYGESSDYMVIKGY
Ga0182036_109378701	3300016270	Soil	AIALFVAWWVLPTPAEIARLRTERDELSSKLAVLVQRGARADLRRCGSGHVCVRVDLSAPRYGEGLDYMVIKGY
Ga0182041_104904714	3300016294	Soil	VLPTPAEIARLRTERDQLASNVAVLNQRGARADLRRCGAGRVCVRVDLSAPRYGESSDYMVIKGY
Ga0182033_119297432	3300016319	Soil	GLTVISAAIALFVAWWVLPTPAEIERLRTERDELLSNLAVLNQRGARADLRRCGTRHVCVRVDLSAPRYGESSDYMVIKGY
Ga0182035_104054924	3300016341	Soil	AAIALFVAWWVLPTPAEIARLRTERDQLASNVAVLNQRGARADLRRCGAGRVCVRVDLSAPRYGESSDYMVIKGY
Ga0182032_112805591	3300016357	Soil	LWTLGLTVISVAIALFIAWWVLPTTAEIARLRTERDELSSNLVVLNQRGARADLRRCGTRHVCVRVDLSAPRYGESSDYMVIKGY
Ga0182037_103129554	3300016404	Soil	AWWVLPTPAEIARLRTERDELSSKLAVLVQRGARADLRRCGSGHVCVRVDLSAPRYGEGLDYMVIKGY
Ga0182037_110260751	3300016404	Soil	KTVNTETQRAVEGLQKIKREANARVTLWTLGLTVISVAIALFIAWWVLPTTAEIARLRTERDELSSNLVVLNQRGARADSRRCGAGHVCVRVDLSAPRYGESSDYMVIKGY
Ga0182038_105126813	3300016445	Soil	TLGLTVISAAIALFVAWWVLPTPAEIARLRTERDQLASNVAVLNQRGARADLRRCGAGRVCVRVDLSAPRYGESSDYMVIKGY
Ga0187781_105545171	3300017972	Tropical Peatland	VDEMKTVQAEAQSAVEALRRVKRAANVRVILWTMGLTAISAGIALFVAWWVLPTPAEITRLRAARDELTSNLAVLNQRGARADVRRCGTVHLCVRVDMNAPRYGDQRDFFVIRGY
Ga0187781_109475632	3300017972	Tropical Peatland	LPTPTEITRLRTERDELASNIAILNQRGARADLRRCGAEHLCVRVDLSAPRYGESSDYMVIRGY
Ga0187766_110419432	3300018058	Tropical Peatland	NARVTLWTLALTVTSAAIALFVAWWVLPTPTEIARLRIERDELAANIAALNQRGARADLRRCGAGRVCVRVDVTAPRYGESSDYLVIKGY
Ga0187773_110301101	3300018064	Tropical Peatland	ARLRTERDELASNVAVLNQRGARADLRRCGTGRLCVRVDFGAPRYGESSDYLVIKGY
Ga0187773_111958162	3300018064	Tropical Peatland	NARVTLWTLGLTAISAAIALFVAWWVLPTPAEIARLRTERDELASKLVVLNQRGARADLRRCGVGRVCVRVDLSAPRYGESSDYLVIKGY
Ga0187772_104471542	3300018085	Tropical Peatland	RVKRAANARVTLWTIGLTAISVCIALFVAWWALPTRAEIAALRAERDELASNVAVLTQRGARAELRLCGTGHLCVRVDMNAPRYGDQRDFFIIQGY
Ga0187774_100015301	3300018089	Tropical Peatland	IARLRTERDELASNVAVLNQRGARSDLRRCGTRHVCVRVDLSAPRYGESSDYLVIKGY
Ga0210405_103392202	3300021171	Soil	LKRAVNARVTFWTLGVTAIALGVALFVAWWVLPTPADIAALRAERDALASNIAVLNQRGARADLRRCGAGHLCVRVDLKAPRYGESSDYLIIRGY
Ga0210396_117228851	3300021180	Soil	SAAIALFVAWWVLPTPAEIGRLRTERDELASNIAVLNQRGARADLRRCGAGRVCVRVDLNAPRYGESSDYMVIKGY
Ga0213879_101591061	3300021439	Bulk Soil	FVAWWVLPTRAEIAALRTERDELAGNVAVLDRRGARADLRLCGTRHLCVRVDVNAPRYGDQRDYFVIRGY
Ga0210402_103295851	3300021478	Soil	TAIALGVALFVAWWVLPTPGEIAALRTERDALASNIAVLNQRGARADVRRCGTGHLCVRVDLNAPRYGESSDYLVISGY
Ga0210409_105702113	3300021559	Soil	EALQKMKRAANVRVTLWTLGLTATSAAIALFVAWWVLPTPAEIARLRAERDELASNIAVLNQRGARADLRRCGAGRVCVRVDLSAPRYGESSDYMVIKGY
Ga0126371_118479722	3300021560	Tropical Forest Soil	VISVAIALFIAWWVLPTQAEIARLRTERDELVSNIAALNHRGARADLRRCGAGRVCVRVDLSAP
Ga0207693_107128992	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LHVETRGAIEALHRVKRAANARVMLCTLGLTALSAGVGLFVAWWVLPTRAEIAVLRSERDELASNIAVLNERGAWADVRRCGKGQLCVRVDLKAPRYGESSDYLLLKRY
Ga0209152_102069212	3300026325	Soil	QVLPTPAEISRLRTERDELASNIAILNQRGAHADLRRCGAGRMCVRVDLSAPRYGESSDYMVIKGY
Ga0209158_11777822	3300026333	Soil	VTLWTLAVTATSVAIALFVAWWVLPTPREIARLRIERDELASNIAILNQRGARADLRRCGAGRVCVRVDLSAPRYGESSDYMVIKGY
Ga0209156_102790582	3300026547	Soil	WTLALTATSVAIALFVAWWVLPTPREIARLRIERDELASNIAILNQRGARADLRRCGAGRVCVRVDLSAPRYGESSDYLVIRGY
Ga0209733_10093786	3300027591	Forest Soil	EALHKISRAANARVMLWTLGLTGTSAAIALFVAWWVLPTAAEIARLRTERDELASNIAVLNQRGARADLRRCGAGRVCVRVDLGAPRYGESSDYMVIKGY
Ga0209167_101293034	3300027867	Surface Soil	EIARLRAERDDLASNIAVLNQRGARADLRRCGAGRVCVRVDLGAPRYGESSDYMVIKGY
Ga0222749_103395672	3300029636	Soil	VLAETQGAVAGLQALKRPADARVTFWTLGVTAIAVAIALFVAWWVLPKPAEIAALRTERDALASNIAVLNQRGARADLRRCGAGRVCVRVDLSAPRYGESSDYVVIKGY
Ga0318541_108752301	3300031545	Soil	LRTERDELLSNLAVLNQRGARADLRRCGTRHVCVRVDLSAPRYGESSDYMVIKGY
Ga0318573_105134721	3300031564	Soil	PTPAEIARLRTEREELASNLAVLNERGARADLRRCGTAHLCVRVDLKAPRYGESSDYLIIKGY
Ga0318515_104469292	3300031572	Soil	FVAWWVLPTPAEIARLRTERDELSSKLAVLVQRGARADLRRCGSGHVCVRVDLSAPRYGEGLDYMVIKGY
Ga0310915_104143661	3300031573	Soil	RRLRQAANARETLWTLSLTAISAGVALFVAWWVLPTPAEIARLRTEREELASNLAVLNERGARADLRRCGTAHLCVRVDLKAPRYGESSDYLIIKGY
Ga0318542_101852481	3300031668	Soil	AEIARLRTERDELSSNLVVLNQRGARADSRRCGAGHVCVRVDLSAPRYGESSDYMVIKGY
Ga0318561_104206151	3300031679	Soil	LQRIRREANARVTLWTLSLIGISVAIALFVAWWVLPMPAEIARLRTERDELANNIAALNQRGARADLRRCGAGRVCVRVDLSAPRYGERSDYLVIKGY
Ga0318574_101399295	3300031680	Soil	LRTERDELASNIAVLNQRGARADLRRCGAGHLCVRVDLSAPRYGESSDYLVIKGY
Ga0318574_105743352	3300031680	Soil	PTPAEIAKLRIERDELASNLAVLDQLGARADVRRCGTAHLCVRVDLKAPRYGVSSDYLILRGY
Ga0318572_106742801	3300031681	Soil	VISAAIALFVAWWVLPTPAEIARLRTERDQLASNVAVLNQRGARADLRRCGAGRVCVRVDLSAPRYGESSDYMVIKGY
Ga0307476_100813854	3300031715	Hardwood Forest Soil	LFIAWWVLPTPAEISRLRTERDELASNIAVLNQRGARADLRRCGAGRVCVRVDLSAPRYGASSDYLVIKGY
Ga0307476_111859772	3300031715	Hardwood Forest Soil	SALQRLKRAANARATFWTLGVTAIALGVALFVAWWVLPTPAEIAALRTERDVLASNIVALNERGARADLRRCGAGHLCVRVDLKAPRYGEGSDYLIIRGY
Ga0318492_102026753	3300031748	Soil	EIARLRTERDELAGNIAVLNQRGARADLRRCGTRHLCVRVDLSAPRYGESSDYMVIKGY
Ga0307477_106361252	3300031753	Hardwood Forest Soil	FVAWWVLPTPAEIAALRTERDVLASNIVALNERGARADLRRCGAGHLCVRVDLKAPRYGEGSDYLIIRGY
Ga0318537_102105891	3300031763	Soil	AWWVLPTPAEIARLRTEREELASNLAVLNERGARADLRRCGTAHLCVRVDLKAPRYGESSDYLIIKGY
Ga0318550_104817672	3300031797	Soil	AQRAVEALQRIRREANARVTLWTLSLIGISVAIALFVAWWVLPMPAEIARLRTERDELANNIAALNQRGARADLRRCGAGRVCVRVDLSAPRYGERSDYLVIKGY
Ga0318564_102244203	3300031831	Soil	WWVLPMPAEIARLRTERDELANNIAALNQRGARADLRRCGAGRVCVRVDLSAPRYGERSDYLVIKGY
Ga0318512_106451291	3300031846	Soil	LWTLSLIGISVAIALFVAWWVLPMPAEIARLRTERDELANNIAALNQRGARADLRRCGAGRVCVRVDLSAPRYGERSDYLVIKGY
Ga0306919_100297607	3300031879	Soil	RNQIQRGLVDALKTVNTETQRAVEGLQKIKREANARVTLWTLGLTVISAAIALFVAWWVLPTPAEIARLRTERDQLASNVAVLNQRGARADLRRCGAGRVCVRVDLSAPRYGESSDYMVIKGY
Ga0306925_105191224	3300031890	Soil	IARLRTERDELAGNIAVLNQRGARADLRRCGTRHLCVRVDLSAPRYGESSDYMVIKGY
Ga0306921_118436881	3300031912	Soil	LPTRAEIAALRTERDGLASNVAVLNQRGARADLRLCGTGRLCVRVDMNATRYGEQRDYYVIRGY
Ga0310916_100763881	3300031942	Soil	ALKTVHAEAQRAVDALQRIKREANARVTLWTLGLTVISVAIALFIAWWVLPTRAEIARLRTERDELASNIAVLNQRGARADLRRCGAGHLCVRVDLSAPRYGESSDYLVIKGY
Ga0310916_114149862	3300031942	Soil	IALFIAWWVLPTRDEIARLRTERDELAGNIAVLNQRGARADLRRCGTRHLCVRVDLSAPRYGESSDYMVIKGY
Ga0310909_105446721	3300031947	Soil	TAISAGVALFVAWWVLPTPAEIARLRTEREELASNLAVLNERGARADLRRCGTAHLCVRVDLKAPRYGESSDYLIIKGY
Ga0310909_105455843	3300031947	Soil	DEIARLRTERDELAGNIAVLNQRGARADLRRCGTRHLCVRVDLSAPRYGESSDYMVIKGY
Ga0310909_107247862	3300031947	Soil	LQKIKREANARVTLWTLGLTVISAAIALFVAWWVLPTPAEIARLRTERDQLASNVAVLNQRGARADLRRCGAGRVCVRVDLSAPRYGESSDYMVIKGY
Ga0310909_108905892	3300031947	Soil	LFVAWWVLPTPAEIARLRTERDELSSKLAVLVQRGARADLRRCGSGHVCVRVDLSAPRYGEGLDYMVIKGY
Ga0310909_112527561	3300031947	Soil	KRAANARVTLWTLGLTAISTSVALLVAWWVLPTPTEIARLRTERDELASNVAVLNQRGARADLRRCGTGHLCIRVDTNAPRYGDHRDYFVIRGY
Ga0318530_103559862	3300031959	Soil	RVTLWTLGLTVISVAIALFIAWWVLPTRAEIARLRTERDELASNIAVLNQRGARADLRRCGAGHLCVRVDLSAPRYGESSDYLVIKGY
Ga0307479_113960541	3300031962	Hardwood Forest Soil	ALRALKWAANARATFWTLGVAAIALGVALFVAWWILPTPAEIAALRTERDALASNVALLSQRGARADFRRCGTGHLCVRVDLKAPRYGESSDYLVIRGY
Ga0318531_103111611	3300031981	Soil	PTRAEIARLRTERDELASNIAVLNQRGARADLRRCGAGHLCVRVDLSAPRYGESSDYLVIKGY
Ga0306922_122490122	3300032001	Soil	EANARVTLWTLSLTVIPTAIALFIAWWVLPTPAEIARLRTERDGLASNIAVLNQRGARADLRLCGAGRVCVRVDLSAPRYGETSDYMVIKGY
Ga0310911_106994502	3300032035	Soil	LWTLGLTVISAAIALFVAWWVLPTPAEIARLRTERDELSSKLAVLVQRGARADLRRCGSGHVCVRVDLSAPRYGEGLDYMVIKGY
Ga0318510_103686721	3300032064	Soil	VRRAANARVTLWTVGPTAISAGIALFIAWWVLPTPTEIARLRTERDELASNVAVLNQRGARADLRRCGTGHLCIRVDTNAPRYGDHRDYFVIRGY
Ga0318524_102692911	3300032067	Soil	LIGISVAIALFVAWWVLPMPAEIARLRTERDELANNIAALNQRGARADLRRCGAGRVCVRVDLSAPRYGERSDYLVIKGY
Ga0318524_107117931	3300032067	Soil	ALQRIKRQANARVTLWTLGLTVISVAIALFIAWWVLPTTAEIARLRTERDELSSNLVVLNQRGARADLRRCGTGHVCVRVDLSAPRYGESSDYMVIKGY
Ga0318553_106322751	3300032068	Soil	LWTLGLTVIWAVIALFVAWWVLPTPAEIERLRTERDELLSNLAVLNQRGARADLRRCGTRHVCVRVDLSAPRYGESSDYMVIKGY
Ga0318553_107152041	3300032068	Soil	LFVAWWVLPMPAEIARLRTERDELANNIAALNQRGARADLRRCGAGHLCVRVDLSAPRYGESSDYLVIKGY
Ga0318525_102434781	3300032089	Soil	ANARVTLWTLSLTAISAGVALFVAWWVLPTPAEIARLRTEREELASNLAVLNERGARADLRRCGTAHLCVRVDLKAPRYGESSDYLIIKGY
Ga0318518_102209851	3300032090	Soil	VISVAIALFIAWWVLPTPAEIARLRTERDELASNIAVLNQRGARADLRRCGAGHLCVRVDLSAPRYGESSDYLVIKGY
Ga0335085_111825272	3300032770	Soil	NARTTFWTFGVTALAAANAILVAWLVLPKPAEIAALRLERQELTSRIAVLEERGARAQLSLCGTQRLCVRADLKAPRYGKDSDYVVIKGY
Ga0335085_117633021	3300032770	Soil	PAGIALFVTWWVLPRPEDIARIRSERDELTSNLALLNRHGARADLRHCGTARLYVRVDLNAPRYGGQRDYFVIRGDWQW
Ga0335079_100226243	3300032783	Soil	MKIAQAETQRAVEALQRVKRAANARVTLRTLGLTTISAGVALFVAWRVLPTRAEIAALRTERDELTSNVAVLNQRGARADLRRCGTGHLCVRVDLRAPRYGESSDYLIIKGY
Ga0335071_121316871	3300032897	Soil	VVTAIAAANAIFVAWYVLPKPAEIAAMRAERAELASNLALLERHGARADLRRCGAGRLCVRVDLKAARYGAHSDYLIVKGY
Ga0335076_1003883610	3300032955	Soil	SVAVALFVAWWLLPTPAEVARLRTERDELASNIAVLNQRGARADLRRCGAGRVCVRVDLSAPRYGESSDYMVIKGY
Ga0335084_116191221	3300033004	Soil	QAVGEQMKFVQADAQRAVEALQKVKRGVNARVALSTLGATAISAGITLIVAWWVLPTRGEITALRAERDELASNVAVLNQRGARADLRRCGTGHLCVRVDLKAPRYGEASDYLIVKGY
Ga0318519_109409522	3300033290	Soil	LIAWWMLPTPAEIARLRTERDELAGNIAALNQRGARADLRRCGAGRVCVRVDLSAPRYGASADYMVIKGY
Ga0314867_094635_511_693	3300033808	Peatland	AEIARLRTERDELASNIAILNQRGARADVRRCGAGHLCVRVDLSAPRYGESSDYLVIKGY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097792

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences