Metagenome / Metatranscriptome Family F097786

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097786
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	44 residues
Representative Sequence	NPPYGADEYLREAYGAIHQGIAAAGAGYVEVARLTPERMAQ
Number of Associated Samples	91
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.94 %
% of genes near scaffold ends (potentially truncated)	93.27 %
% of genes from short scaffolds (< 2000 bps)	90.38 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (68.269 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.423 % of family members)
Environment Ontology (ENVO)	Unclassified (22.115 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.038 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.99% β-sheet: 0.00% Coil/Unstructured: 71.01%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF14357	DUF4404	63.46
PF11859	DUF3379	17.31
PF08281	Sigma70_r4_2	5.77
PF00490	ALAD	3.85
PF00067	p450	1.92
PF08501	Shikimate_dh_N	0.96
PF02852	Pyr_redox_dim	0.96
PF00709	Adenylsucc_synt	0.96
PF12323	HTH_OrfB_IS605	0.96
PF01230	HIT	0.96
PF00144	Beta-lactamase	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0113	Delta-aminolevulinic acid dehydratase, porphobilinogen synthase	Coenzyme transport and metabolism [H]	3.85
COG2124	Cytochrome P450	Defense mechanisms [V]	1.92
COG0104	Adenylosuccinate synthase	Nucleotide transport and metabolism [F]	0.96
COG0169	Shikimate 5-dehydrogenase	Amino acid transport and metabolism [E]	0.96
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.96
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.96
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.27 %
Unclassified	root	N/A	31.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.27 %
Unclassified	root	N/A	31.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.27 %
Unclassified	root	N/A	31.73 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	56.73 %
Unclassified	root	N/A	31.73 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	47.12 %
Unclassified	root	N/A	31.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.73 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	15.38 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.96 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.73 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	15.38 %
unclassified Chromatiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales	0.96 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.73 %
unclassified Steroidobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae	11.54 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1.92 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.96 %
Chromatiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.73 %
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	11.54 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.96 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.96 %
Chromatiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10282217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	605	Open in IMG/M
3300001413\|JGI20180J14839_1013791	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300002245\|JGIcombinedJ26739_100346797	All Organisms → cellular organisms → Bacteria → Proteobacteria	1366	Open in IMG/M
3300004080\|Ga0062385_10874739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	594	Open in IMG/M
3300004152\|Ga0062386_101242071	Not Available	619	Open in IMG/M
3300004635\|Ga0062388_102183617	All Organisms → cellular organisms → Bacteria → Proteobacteria	576	Open in IMG/M
3300005148\|Ga0066819_1007607	All Organisms → cellular organisms → Bacteria → Proteobacteria	724	Open in IMG/M
3300005163\|Ga0066823_10123259	All Organisms → cellular organisms → Bacteria → Proteobacteria	552	Open in IMG/M
3300005591\|Ga0070761_10924135	Not Available	552	Open in IMG/M
3300005712\|Ga0070764_10519049	Not Available	718	Open in IMG/M
3300006050\|Ga0075028_100230278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1011	Open in IMG/M
3300006050\|Ga0075028_100678987	Not Available	618	Open in IMG/M
3300006050\|Ga0075028_100879866	All Organisms → cellular organisms → Bacteria → Proteobacteria	550	Open in IMG/M
3300006052\|Ga0075029_100472755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	824	Open in IMG/M
3300006052\|Ga0075029_100602946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	734	Open in IMG/M
3300006052\|Ga0075029_100780437	All Organisms → cellular organisms → Bacteria → Proteobacteria	649	Open in IMG/M
3300006086\|Ga0075019_10327515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	926	Open in IMG/M
3300006175\|Ga0070712_101103354	All Organisms → cellular organisms → Bacteria → Proteobacteria	689	Open in IMG/M
3300009624\|Ga0116105_1063293	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300009665\|Ga0116135_1383150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	568	Open in IMG/M
3300009701\|Ga0116228_10919717	Not Available	584	Open in IMG/M
3300010343\|Ga0074044_10890890	Not Available	582	Open in IMG/M
3300010877\|Ga0126356_10126716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	665	Open in IMG/M
3300011271\|Ga0137393_11787738	Not Available	503	Open in IMG/M
3300012361\|Ga0137360_11831788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	513	Open in IMG/M
3300012927\|Ga0137416_12267030	Not Available	500	Open in IMG/M
3300012982\|Ga0168317_1070488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	819	Open in IMG/M
3300014638\|Ga0181536_10369312	Not Available	648	Open in IMG/M
3300014654\|Ga0181525_10714349	Not Available	563	Open in IMG/M
3300014838\|Ga0182030_10630077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1026	Open in IMG/M
3300015053\|Ga0137405_1408430	All Organisms → cellular organisms → Bacteria	1906	Open in IMG/M
3300015164\|Ga0167652_1089574	Not Available	505	Open in IMG/M
3300015168\|Ga0167631_1022166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	1002	Open in IMG/M
3300015193\|Ga0167668_1031190	Not Available	1173	Open in IMG/M
3300015203\|Ga0167650_1114678	Not Available	579	Open in IMG/M
3300017948\|Ga0187847_10222261	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300017975\|Ga0187782_11073689	Not Available	628	Open in IMG/M
3300018047\|Ga0187859_10467622	Not Available	699	Open in IMG/M
3300019890\|Ga0193728_1084077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1494	Open in IMG/M
3300020579\|Ga0210407_11159998	Not Available	583	Open in IMG/M
3300020580\|Ga0210403_10120511	All Organisms → cellular organisms → Bacteria	2134	Open in IMG/M
3300020582\|Ga0210395_10897245	Not Available	659	Open in IMG/M
3300021168\|Ga0210406_10080456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2788	Open in IMG/M
3300021180\|Ga0210396_11291468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	608	Open in IMG/M
3300021181\|Ga0210388_10344193	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300021401\|Ga0210393_11420699	Not Available	554	Open in IMG/M
3300021405\|Ga0210387_10034749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	3993	Open in IMG/M
3300021405\|Ga0210387_10980760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	741	Open in IMG/M
3300021420\|Ga0210394_10342832	All Organisms → cellular organisms → Bacteria → Proteobacteria	1312	Open in IMG/M
3300021420\|Ga0210394_10883052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	778	Open in IMG/M
3300021420\|Ga0210394_11607602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	547	Open in IMG/M
3300021474\|Ga0210390_10324533	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300021477\|Ga0210398_11320739	Not Available	566	Open in IMG/M
3300022557\|Ga0212123_10451028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	848	Open in IMG/M
3300022722\|Ga0242657_1086539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	752	Open in IMG/M
3300023101\|Ga0224557_1199084	Not Available	698	Open in IMG/M
3300025414\|Ga0208935_1038205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	638	Open in IMG/M
3300025612\|Ga0208691_1064626	Not Available	826	Open in IMG/M
3300025634\|Ga0208589_1028679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1530	Open in IMG/M
3300027432\|Ga0209421_1028536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1087	Open in IMG/M
3300027867\|Ga0209167_10691828	Not Available	557	Open in IMG/M
3300027884\|Ga0209275_10593142	Not Available	635	Open in IMG/M
3300027889\|Ga0209380_10053068	All Organisms → cellular organisms → Bacteria → Proteobacteria	2301	Open in IMG/M
3300028036\|Ga0265355_1001349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1575	Open in IMG/M
3300028742\|Ga0302220_10270552	Not Available	622	Open in IMG/M
3300028780\|Ga0302225_10187362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	997	Open in IMG/M
3300028808\|Ga0302228_10290593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	733	Open in IMG/M
3300028879\|Ga0302229_10057674	All Organisms → cellular organisms → Bacteria	1912	Open in IMG/M
3300028906\|Ga0308309_10128527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2008	Open in IMG/M
3300029911\|Ga0311361_10992732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	704	Open in IMG/M
3300029913\|Ga0311362_10185781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2422	Open in IMG/M
3300029944\|Ga0311352_10195642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1726	Open in IMG/M
3300029945\|Ga0311330_10702138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	779	Open in IMG/M
3300029951\|Ga0311371_11612447	Not Available	714	Open in IMG/M
3300029997\|Ga0302302_1288791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	594	Open in IMG/M
3300030011\|Ga0302270_10078323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2157	Open in IMG/M
3300030051\|Ga0302195_10498175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	519	Open in IMG/M
3300030507\|Ga0302192_10094954	All Organisms → cellular organisms → Bacteria	1403	Open in IMG/M
3300030509\|Ga0302183_10155409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	897	Open in IMG/M
3300030580\|Ga0311355_11187285	Not Available	674	Open in IMG/M
3300030707\|Ga0310038_10477835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	530	Open in IMG/M
3300030813\|Ga0265750_1051083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	626	Open in IMG/M
3300031027\|Ga0302308_10291415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1010	Open in IMG/M
3300031057\|Ga0170834_101845452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	729	Open in IMG/M
3300031057\|Ga0170834_103553373	Not Available	525	Open in IMG/M
3300031128\|Ga0170823_15094337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	936	Open in IMG/M
3300031233\|Ga0302307_10299142	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300031234\|Ga0302325_11273332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	970	Open in IMG/M
3300031247\|Ga0265340_10422286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	588	Open in IMG/M
3300031474\|Ga0170818_107723691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	544	Open in IMG/M
3300031474\|Ga0170818_110611737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium	999	Open in IMG/M
3300031672\|Ga0307373_10100357	Not Available	2512	Open in IMG/M
3300031708\|Ga0310686_108351259	Not Available	684	Open in IMG/M
3300031708\|Ga0310686_116031249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1248	Open in IMG/M
3300031718\|Ga0307474_10300479	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300031718\|Ga0307474_11504285	Not Available	530	Open in IMG/M
3300032180\|Ga0307471_101599148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	808	Open in IMG/M
3300032180\|Ga0307471_102426571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	663	Open in IMG/M
3300032515\|Ga0348332_11718768	Not Available	622	Open in IMG/M
3300033822\|Ga0334828_139019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	568	Open in IMG/M
3300033887\|Ga0334790_111094	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300034199\|Ga0370514_066857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	908	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.12%
Host-Associated	Host-Associated	2.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.85%
Aquatic	Environmental → Aquatic	18.27%
Plants	Host-Associated → Plants	2.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.77%
Peat	Environmental → Terrestrial → Peat	21.15%
Freshwater	Environmental → Aquatic → Freshwater	10.58%
Sediment	Environmental → Aquatic → Sediment	6.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.92%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.96%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.96%
Geologic	Environmental → Terrestrial → Geologic	0.96%
Peat Moss	Host-Associated → Plants → Peat Moss	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.27%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	21.15%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.58%
Loam	Environmental → Terrestrial → Soil → Loam	7.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.92%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.96%
Clay	Environmental → Terrestrial → Soil → Clay	0.96%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.96%
Mine	Environmental → Terrestrial → Geologic → Mine	0.96%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.08%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	21.15%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.27%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.73%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.88%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.92%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.96%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Geologic → Mine → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.42%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	11.54%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.73%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	5.77%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	4.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.81%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.81%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.85%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.88%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.92%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.92%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.96%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.96%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.96%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.96%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.96%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.96%
Weathered Mine Tailings	Environmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings	0.96%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.96%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001413	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005148	Soil and rhizosphere microbial communities from Laval, Canada - mgLMA	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009701	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012982	Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCWfield	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015164	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4b, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015168	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4A, Ice margin, adjacent to proglacial lake)	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015203	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3c, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028036	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2	Host-Associated	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300029997	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_3	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030813	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031672	Soil microbial communities from Risofladan, Vaasa, Finland - OX-2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300033822	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 5-9	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_102822171	3300001356	Peatlands Soil	GSGLMIVNPPFGADEYLATAYAAIHRGIAAPGAGYVEVARLTPEKL*
JGI20180J14839_10137911	3300001413	Arctic Peat Soil	PDDAGLGLAGSGLMIVNPPYGADEFLTAAYGAIHRGIAAAGAGYVEVARLTPEKL*
JGIcombinedJ26739_1003467971	3300002245	Forest Soil	LVNPPYGADDFLREAYLAIHASLAEAGRGYVEVARLTAERMAQ*
Ga0062385_108747391	3300004080	Bog Forest Soil	AGVGLAGSGLMIVNPPFGADEYLREAYEAIQRGIAAPNSGYVEVARLTPERMAQ*
Ga0062386_1012420713	3300004152	Bog Forest Soil	PPYGADEYLQRSYGAIHAGLTDSSSGYVEVTRLTGERVAQ*
Ga0062388_1021836171	3300004635	Bog Forest Soil	AGSGLMIVNPPYGADEYLRRAYAAIHEGIALPGAGYVEVARLTPERMAL*
Ga0066819_10076071	3300005148	Soil	AGSGLMIVNPPYGADDYLNDAYAAIHKGIAAPGSGYVEIARLTPERMAQ*
Ga0066823_101232592	3300005163	Soil	SGLMIVNPPYGADDYLNDAYAAIHKGIAAPGSGYVEIARLTPERMAQ*
Ga0070761_109241351	3300005591	Soil	NPPHGADEYLTGAYAAIHQGIATSGSGYVEVARLTPERMAQ*
Ga0070764_105190493	3300005712	Soil	DNYLSDAYAAIHKVIASSGSGYVEVTRLTPERMAQ*
Ga0075028_1002302781	3300006050	Watersheds	PDDAGVGLAGSGLMIVNPPFGTDEYLTRAYATIREGIATPKAGYVEVGRLTPERMAQ*
Ga0075028_1006789871	3300006050	Watersheds	VVNPPYGADDFLMQAYGVIHGAVAAAGAGYVEVARLTPELMAK*
Ga0075028_1008798661	3300006050	Watersheds	GVGLAGSGLMIVNPPYGADDYLNDAYAAIHKGIAAPGSGYVEIARLTPERMAQ*
Ga0075029_1004727553	3300006052	Watersheds	IVNPPYGADDHLREAYTAVHRAIAAAGAGYVEVDRLTPERMAQ*
Ga0075029_1006029463	3300006052	Watersheds	VGLAGSGLMIANPPYGADEFLGEAYARLHELIGTPAMGYVEVARLTPERVAS*
Ga0075029_1007804371	3300006052	Watersheds	GLLIVNPPYGADDHLLEAYSAIHSAVAAAGSGYVEVARLTPERVAQ*
Ga0075019_103275151	3300006086	Watersheds	LIVNPPYGADDHLREAYTAVHRAIAAAGAGYVEVDRLTPERMAQ*
Ga0070712_1011033543	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	AGVGLAGSGLMIVNPPYGADDYLNDAYAAIHKGIAAPGSGYVEIARLTPERMAQ*
Ga0116105_10632931	3300009624	Peatland	YGADEHLTAAYAAIHRGVAPATDAGYVEVARLTPEQL*
Ga0116135_13831503	3300009665	Peatland	GVGLAGSGLIIVNPPYGADEFLASAYSAVHRILAPSGSGYVEVARLTPERMAQ*
Ga0116228_109197171	3300009701	Host-Associated	NPPYGADTYLQQAYSAIHGAIADPGAGYVEVTRLTPERIAR*
Ga0074044_108908901	3300010343	Bog Forest Soil	GSGLIIVNPPYGADDYLAGAYAAIHQGIATPGAGYVEVARLTAERAGH*
Ga0126356_101267161	3300010877	Boreal Forest Soil	AGSGLLIVNPPYGADQFLRDAYGAIHQAIATAGAGYVEVARLTPERMAQ*
Ga0137393_117877382	3300011271	Vadose Zone Soil	AGSGLMVVNPPYGADDFLNQAYEVIHGAVAAAGAGYVEVARLTPELMAK*
Ga0137360_118317881	3300012361	Vadose Zone Soil	AGVGLAGSGLMIVNPPHGTDEYLRDAYAAIHSGIAVPGAGYVEVGRLTPERMAQ*
Ga0137416_122670301	3300012927	Vadose Zone Soil	IVNPPFGTDAYLRAAYAAIHAGIAASGAGYVAVTRLTPERMAQ*
Ga0168317_10704881	3300012982	Weathered Mine Tailings	VNPPYGADDYLAAAYAAIHRILAPSGAGYVEVARLTPERMAQ*
Ga0181536_103693123	3300014638	Bog	PPYGADEYLQNAYTTVHQGIAAPGSGYVEVARLTRERMAQ*
Ga0181525_107143493	3300014654	Bog	DYLSGAYAAVHQGIAARGAGYVEVGRLTPERMAQ*
Ga0182030_106300771	3300014838	Bog	DAGVGLAGSGLAIVNPPHGTDEYLSDAYAAIHRGIAPTGAGYVEVARLTPERMAQ*
Ga0137405_14084302	3300015053	Vadose Zone Soil	VIVNPPYGADQFLRDAYTAIHRVIAAAGAGYVEVARLTPERVAQ*
Ga0167652_10895741	3300015164	Glacier Forefield Soil	PYGTDSYLREAYAAVHDAVASAGAGYVEVARLTPERMSQ*
Ga0167631_10221661	3300015168	Glacier Forefield Soil	GSGLMIVNPPYGADQFLRDAYAAIHQGIGAPGAGYVEVGRLTPERMAH*
Ga0167668_10311903	3300015193	Glacier Forefield Soil	LLIVNPPYGADDYLRNAYAMIHRGIAAPGAGYVEVGRLTAERMAQ*
Ga0167668_10725503	3300015193	Glacier Forefield Soil	DDFLQQAYGSIHSAVAAAGAGYVEVARLTPELVAK*
Ga0167650_11146783	3300015203	Glacier Forefield Soil	PPYGADDHLRDAYTAIHRGIATPGAGYVEVGRLTPERMAQ*
Ga0187847_102222613	3300017948	Peatland	LAGSGLMIVNPPFGADEYLASAYAAIHRGIAAADAGYVEVARLTPEKL
Ga0187782_110736891	3300017975	Tropical Peatland	VNPPFGADEFLASAYAAVHEALAMAGAGYVEVARLTPEQMA
Ga0187859_104676223	3300018047	Peatland	NPPFGTDADLKSAYGVIHGALAPAAGAGYVEVARLTPERMAQ
Ga0193728_10840771	3300019890	Soil	GSGLMIVNPPYGTDEYLREAYAAIHSGIAASGAGYVEVARLTPERMAQ
Ga0210407_111599981	3300020579	Soil	PYGTDEYLQRAYGAIHGALGDSGVGYVEVARLTAERVAQ
Ga0210403_101205115	3300020580	Soil	NPPYGADEYLREAYGAIHQGIAAAGAGYVEVARLTPERMAQ
Ga0210395_108972451	3300020582	Soil	DEFFRDAYGAIHQAIAAAGAGYVEVARLTPERLAQ
Ga0210406_100804561	3300021168	Soil	ADQFLRDAYGAIHQAIAPAGAGYVEVARLTPERMAQ
Ga0210396_112914681	3300021180	Soil	GLAGSGLMIVNPPYGTDEYLTDAYAAIHQGIAAPGAGYVEVARLTAERVAH
Ga0210388_103441934	3300021181	Soil	VNPPYGADEFLSAAYSAVHRTLAPAGSGYVEVERLTPERMAQ
Ga0210393_114206991	3300021401	Soil	LMVVNPPYGADDFLKQAYEAIHGRVAAAGAGYVEVARLTPELMAQ
Ga0210387_100347491	3300021405	Soil	IVNPPYGADDFFRDAYGAIHQAIAAAGAGYVEVARLTPERLAQ
Ga0210387_109807601	3300021405	Soil	VNPPYGADQFLRDAYGVIHQAIAAPGAGYVEVDRLTPERMAQ
Ga0210394_103428324	3300021420	Soil	PPYGADEFLSGAYAAIHRGIATPGAGYVEVARLTPERMAQ
Ga0210394_108830523	3300021420	Soil	LAGSGLMIVNPPYGADEYLRRAYTAIHKGIASPGAGYVEVARLTPERMAL
Ga0210394_116076021	3300021420	Soil	GSGLMIVNPPYGTDDYLRDAYTAIHSGIAAPGAGYVEVARLTPERMAQ
Ga0210390_103245331	3300021474	Soil	LIVNPPYGADEYLRRAYTAIHEGIAVPGAGYVEVARLTPERMAL
Ga0210398_113207391	3300021477	Soil	GADQHLADAYSAIHGGIATPGAGYVEVGRLTPERVAQ
Ga0212123_104510283	3300022557	Iron-Sulfur Acid Spring	DEYLRAAYTAIHAGIAASGAGYVEVARLTPERMAQ
Ga0242657_10865391	3300022722	Soil	VNPPYGADEYLRAAYGAIHQGIAAAGAGYVEVARLTPEGMAQ
Ga0224557_11990841	3300023101	Soil	GADDYLQEAYAAIHGAIATAGSGYVEVARLTPERMAQ
Ga0208935_10382052	3300025414	Peatland	YGADEHLTAAYAAIHRGVAPATDAGYVEVARLTPEQL
Ga0208691_10646263	3300025612	Peatland	GADEFLASAYSAVHRILAPSGSGYVEVARLTPERMAQ
Ga0208589_10286791	3300025634	Arctic Peat Soil	AGSGLLIVNPPYGADEYLSEAYTAIHRGIAVPGAGYVEVVRLTPERVAQ
Ga0209421_10285363	3300027432	Forest Soil	GLMIVNPPYGADGFLRDAYGAIHQGIAAPGAGYVEVARLTPERMAQ
Ga0209167_106918281	3300027867	Surface Soil	AGSGLLIVNPPYGADEYLRRAYTAIHEGIALPGAGYVDVTRLTPERMAQ
Ga0209275_105931423	3300027884	Soil	YGTDEYLTDAYAAIHQGIAAPGAGYVEVARLTAERVAH
Ga0209380_100530681	3300027889	Soil	PYGADDFLRQAYQAIHASLAEAGRGYVEVARLTAERMAQ
Ga0265355_10013491	3300028036	Rhizosphere	MIVNPPYGADQFLRDAYSAIHQAIAAPGAGYVEVARLTPERMAH
Ga0302220_102705521	3300028742	Palsa	ASVGLAGSGLLLVNPPYGADDFLREAYLAIHASLAEAGRGYVEVARLTPERMAQ
Ga0302225_101873623	3300028780	Palsa	LMVINPPFGADEYLRAAYTAIHAGLAAAGSGYVEVDRLTPERIN
Ga0302228_102905933	3300028808	Palsa	AGSGLLLVNPPYGADDFLREAYAAIHDSLAEAGRGYVEVARLTPERMAQ
Ga0302229_100576741	3300028879	Palsa	SVGLAGSGLLLVNPPYGADDFLREAYLAIHASLAEAGRGYVEVARLTPERMAQ
Ga0308309_101285271	3300028906	Soil	GLMIVNPPYGADQYLRDAYGAIHHAIAVPGAGYVEVVRLTPERLAQ
Ga0311361_109927321	3300029911	Bog	MLINPPFGADEYLRAAYTAIHAGIAAAGSGYVEVNRLTPERIG
Ga0311362_101857811	3300029913	Bog	GLVMVNPPHGTDEFLAAAYSAIHRTLAAPDAGYVEVARLTAERMAQ
Ga0311352_101956421	3300029944	Palsa	GVGLAGSGLMIVNPPYGTDEYLTDAYAAIHQGIAAPGAGYVEVARLTAERVAH
Ga0311330_107021381	3300029945	Bog	GADEALADAYTAIHSALAAPGAGYVEVARLTSERMAQ
Ga0311371_116124473	3300029951	Palsa	PPFGADADLKIAYGVIHGALAPAGAGYVEVARLTPERMAQ
Ga0311336_103032074	3300029990	Fen	DAFLKQAYEVIHGAVAASGAGYVEVARLTVELMAK
Ga0302302_12887912	3300029997	Palsa	VGLAGSGLMVINPPFGADEYLRAAYTAIHAGLAAAGSGYVEVDRLTPERIN
Ga0302270_100783235	3300030011	Bog	SGLMIVNPPYGTDEHLRRAYEAIHRAIAATGAGYVEVARLTPERMAQ
Ga0302195_104981752	3300030051	Bog	LAGSGLMIVNPPYGTDEHLRRAYEAIHRAIAATGAGYVEVARLTPERMAQ
Ga0302192_100949544	3300030507	Bog	PFGADDYLRQAYTAIHASVASAGHGYVEVTRLTPERMA
Ga0302183_101554092	3300030509	Palsa	MIVNPPYGADQYLRDAYGAIHHAIAVPGAGYVEVARLTPERMAQ
Ga0311355_111872853	3300030580	Palsa	GSGLMLVNPPFGADEYLLEAYTAIHAAVATADAGYVEVARLTPERMAH
Ga0310038_104778351	3300030707	Peatlands Soil	GLMIVNPPFGADEYLATAYAAIHRGIAAPGAGYVEVARLTPEKL
Ga0265750_10510831	3300030813	Soil	AGSGLMIVNPPYGADQFLRDAYGAIHEAIAAPGAGYVEVARLTPERMAQ
Ga0302308_102914153	3300031027	Palsa	SGLLLVNPPYGADDFLREAYLAIHASLAEAGRGYVEVARLTPERMAQ
Ga0170834_1018454521	3300031057	Forest Soil	MIVNPPYGADQFLRDAYGAIHRGIAAAGAGYVEVARLTPERLAQ
Ga0170834_1035533732	3300031057	Forest Soil	IVNPPYGADQFLRDAYGAIHRGIAAAGAGYVEVARLTPERMAH
Ga0170823_150943371	3300031128	Forest Soil	LAGSGLMIVNPPYGADQFLRDAYGAIHRGIAAAGAGYVEVARLTPERMAH
Ga0302307_102991423	3300031233	Palsa	MIVNPPYGTDEYLTDAYAAIHQGIAAPGAGYVEVARLTAERVAH
Ga0302325_112733323	3300031234	Palsa	ADEFLRQAYEAIHASVAEAGRGYVEVARLTGERMAQ
Ga0265340_104222862	3300031247	Rhizosphere	GVGLAGSGLMIVNPPYGADEFLNKAYAAIHKGLATPGAGYVEVARLTPERMAQ
Ga0170818_1077236913	3300031474	Forest Soil	DAGVGLAGSGLMIVNPPYGADDYLNDAYAAIHKGIAAPGSGYVEIARLTPERMAQ
Ga0170818_1106117373	3300031474	Forest Soil	VNPPYGADEYLSGAYAAIHKGIAAPGAGYVEVARLTPERMAQ
Ga0307373_101003571	3300031672	Soil	PFGIEEPLRAAYAAIHRHLAPAGAGYVEVARLTPERMAQ
Ga0310686_1083512591	3300031708	Soil	PPYGADEYLHGAYAAIHAGIAAAASGYVEVARLTPERMAQ
Ga0310686_1160312493	3300031708	Soil	FGADEYLRAAYTAIHEGLAAAGSGYVEVDRLTPERIS
Ga0307474_103004791	3300031718	Hardwood Forest Soil	ADQFLRDAYGAIHQAIAAPGAGYVEVDRLTPERMAH
Ga0307474_115042851	3300031718	Hardwood Forest Soil	GADRFLRDAYGAIHHGIAALGAGYVEVARLTPERMAQ
Ga0307471_1015991483	3300032180	Hardwood Forest Soil	YGADEYLRDAYAVIHRAIAAPGAGYVEVVRLTPERMAQ
Ga0307471_1024265713	3300032180	Hardwood Forest Soil	GVGLAGSGLMIVNPPYGADDYLTDAYAAIHKGIAAPGSGYVEIARLTPERMAQ
Ga0348332_117187683	3300032515	Plant Litter	VNPPYGADEYLSEAYAAIHRGIATPGAGYVEVVRLTPERVAQ
Ga0334828_139019_14_172	3300033822	Soil	VGLAGSGLMIVNPPYGTDEYLTEAYTAIHKGIAAPGAGYVEVARLTPERVAQ
Ga0334790_111094_711_839	3300033887	Soil	MIVNPPFGADEYLATAYAAIHRGIAAPGAGYVEVARLTPEKL
Ga0370514_066857_786_908	3300034199	Untreated Peat Soil	PPYGADAFLADAYGELHRGIAQPGAGYVQVARLTPERMPQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097786

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences