NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F097750

Metagenome / Metatranscriptome Family F097750

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F097750
Family Type Metagenome / Metatranscriptome
Number of Sequences 104
Average Sequence Length 87 residues
Representative Sequence MTGETARETRPRRRCAKCGGEVRFSHREYAGKGTSAAVLRCAACGEVIRDAARETVQAPQRHTSKRHRDLDAGPPANPVLDPELAARLLESTRDP
Number of Associated Samples 77
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 47.12 %
% of genes near scaffold ends (potentially truncated) 26.92 %
% of genes from short scaffolds (< 2000 bps) 65.38 %
Associated GOLD sequencing projects 69
AlphaFold2 3D model prediction Yes
3D model pTM-score0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (98.077 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil
(16.346 % of family members)
Environment Ontology (ENVO) Unclassified
(31.731 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(79.808 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 8.13%    β-sheet: 20.33%    Coil/Unstructured: 71.54%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF00293NUDIX 29.81
PF12146Hydrolase_4 16.35
PF12697Abhydrolase_6 14.42
PF02885Glycos_trans_3N 6.73
PF00326Peptidase_S9 6.73
PF05362Lon_C 3.85
PF00075RNase_H 2.88
PF12695Abhydrolase_5 1.92
PF06267DUF1028 1.92
PF00072Response_reg 0.96
PF02705K_trans 0.96
PF00271Helicase_C 0.96
PF00753Lactamase_B 0.96
PF13378MR_MLE_C 0.96
PF01625PMSR 0.96
PF00578AhpC-TSA 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG0466ATP-dependent Lon protease, bacterial typePosttranslational modification, protein turnover, chaperones [O] 3.85
COG1067Predicted ATP-dependent proteasePosttranslational modification, protein turnover, chaperones [O] 3.85
COG1750Predicted archaeal serine protease, S18 familyGeneral function prediction only [R] 3.85
COG3480Predicted secreted protein YlbL, contains PDZ domainSignal transduction mechanisms [T] 3.85
COG3342Uncharacterized conserved protein, Ntn-hydrolase superfamilyGeneral function prediction only [R] 1.92
COG0225Peptide methionine sulfoxide reductase MsrAPosttranslational modification, protein turnover, chaperones [O] 0.96
COG3158K+ uptake protein KupInorganic ion transport and metabolism [P] 0.96


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.08 %
UnclassifiedrootN/A1.92 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2140918007|ConsensusfromContig26818All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium761Open in IMG/M
3300000567|JGI12270J11330_10060606All Organisms → cellular organisms → Bacteria → Terrabacteria group1954Open in IMG/M
3300001356|JGI12269J14319_10000170All Organisms → cellular organisms → Bacteria58900Open in IMG/M
3300001536|A1565W1_10093122All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi4617Open in IMG/M
3300001538|A10PFW1_10952950All Organisms → cellular organisms → Bacteria4952Open in IMG/M
3300001593|JGI12635J15846_10079448All Organisms → cellular organisms → Bacteria2404Open in IMG/M
3300001593|JGI12635J15846_10793613All Organisms → cellular organisms → Bacteria → Terrabacteria group543Open in IMG/M
3300002245|JGIcombinedJ26739_100830042All Organisms → cellular organisms → Bacteria → Terrabacteria group805Open in IMG/M
3300004479|Ga0062595_100523214All Organisms → cellular organisms → Bacteria → Terrabacteria group898Open in IMG/M
3300005435|Ga0070714_101208606All Organisms → cellular organisms → Bacteria → Terrabacteria group737Open in IMG/M
3300005542|Ga0070732_10229440All Organisms → cellular organisms → Bacteria → Terrabacteria group1111Open in IMG/M
3300005542|Ga0070732_10487591All Organisms → cellular organisms → Bacteria → Terrabacteria group746Open in IMG/M
3300005591|Ga0070761_10095912All Organisms → cellular organisms → Bacteria1704Open in IMG/M
3300005921|Ga0070766_10009938All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes4864Open in IMG/M
3300005921|Ga0070766_10057684All Organisms → cellular organisms → Bacteria → Terrabacteria group2201Open in IMG/M
3300005921|Ga0070766_10060750All Organisms → cellular organisms → Bacteria2150Open in IMG/M
3300005921|Ga0070766_10926712All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium597Open in IMG/M
3300005952|Ga0080026_10191530All Organisms → cellular organisms → Bacteria → Terrabacteria group603Open in IMG/M
3300006055|Ga0097691_1036380All Organisms → cellular organisms → Bacteria1860Open in IMG/M
3300006176|Ga0070765_100002405All Organisms → cellular organisms → Bacteria11733Open in IMG/M
3300006176|Ga0070765_100149967All Organisms → cellular organisms → Bacteria2078Open in IMG/M
3300006176|Ga0070765_100933456All Organisms → cellular organisms → Bacteria → Terrabacteria group820Open in IMG/M
3300006176|Ga0070765_100964355All Organisms → cellular organisms → Bacteria → Terrabacteria group806Open in IMG/M
3300006176|Ga0070765_101847367All Organisms → cellular organisms → Bacteria → Terrabacteria group566Open in IMG/M
3300009522|Ga0116218_1160807All Organisms → cellular organisms → Bacteria → Terrabacteria group1018Open in IMG/M
3300009524|Ga0116225_1005348All Organisms → cellular organisms → Bacteria7673Open in IMG/M
3300009661|Ga0105858_1303191All Organisms → cellular organisms → Bacteria → Terrabacteria group502Open in IMG/M
3300009683|Ga0116224_10342982All Organisms → cellular organisms → Bacteria → Terrabacteria group710Open in IMG/M
3300009698|Ga0116216_10002879All Organisms → cellular organisms → Bacteria11312Open in IMG/M
3300009698|Ga0116216_10053290All Organisms → cellular organisms → Bacteria2495Open in IMG/M
3300010379|Ga0136449_100004199All Organisms → cellular organisms → Bacteria43100Open in IMG/M
3300010866|Ga0126344_1191391All Organisms → cellular organisms → Bacteria → Terrabacteria group699Open in IMG/M
3300010876|Ga0126361_10497303All Organisms → cellular organisms → Bacteria → Terrabacteria group1023Open in IMG/M
3300010880|Ga0126350_10245440All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi5331Open in IMG/M
3300010880|Ga0126350_11044982All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi5402Open in IMG/M
3300014052|Ga0120109_1115782All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium623Open in IMG/M
3300014169|Ga0181531_10039193All Organisms → cellular organisms → Bacteria2750Open in IMG/M
3300014489|Ga0182018_10015448All Organisms → cellular organisms → Bacteria5223Open in IMG/M
3300014495|Ga0182015_10003167All Organisms → cellular organisms → Bacteria18789Open in IMG/M
3300014501|Ga0182024_10000773All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria83871Open in IMG/M
3300014501|Ga0182024_10001498All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria60152Open in IMG/M
3300014501|Ga0182024_10023893All Organisms → cellular organisms → Bacteria10908Open in IMG/M
3300014501|Ga0182024_10143307All Organisms → cellular organisms → Bacteria3373Open in IMG/M
3300014501|Ga0182024_10170802All Organisms → cellular organisms → Bacteria3018Open in IMG/M
3300014501|Ga0182024_10492490All Organisms → cellular organisms → Bacteria1561Open in IMG/M
3300014501|Ga0182024_11217388All Organisms → cellular organisms → Bacteria → Terrabacteria group880Open in IMG/M
3300017948|Ga0187847_10621252All Organisms → cellular organisms → Bacteria → Terrabacteria group605Open in IMG/M
3300017959|Ga0187779_10603575All Organisms → cellular organisms → Bacteria → Terrabacteria group735Open in IMG/M
3300018034|Ga0187863_10805242Not Available533Open in IMG/M
3300019786|Ga0182025_1152410All Organisms → cellular organisms → Bacteria → Terrabacteria group1267Open in IMG/M
3300021407|Ga0210383_10320786All Organisms → cellular organisms → Bacteria → Terrabacteria group1334Open in IMG/M
3300021407|Ga0210383_10714425All Organisms → cellular organisms → Bacteria → Terrabacteria group861Open in IMG/M
3300021420|Ga0210394_10026547All Organisms → cellular organisms → Bacteria5264Open in IMG/M
3300021420|Ga0210394_10708347All Organisms → cellular organisms → Bacteria → Terrabacteria group882Open in IMG/M
3300021479|Ga0210410_11050388All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium704Open in IMG/M
3300023255|Ga0224547_1022491All Organisms → cellular organisms → Bacteria → Terrabacteria group807Open in IMG/M
3300025588|Ga0208586_1069946All Organisms → cellular organisms → Bacteria → Terrabacteria group777Open in IMG/M
3300025627|Ga0208220_1049990All Organisms → cellular organisms → Bacteria → Terrabacteria group1229Open in IMG/M
3300025664|Ga0208849_1000360All Organisms → cellular organisms → Bacteria43555Open in IMG/M
3300025857|Ga0209014_10129032All Organisms → cellular organisms → Bacteria → Terrabacteria group952Open in IMG/M
3300025929|Ga0207664_11031414All Organisms → cellular organisms → Bacteria → Terrabacteria group737Open in IMG/M
3300027565|Ga0209219_1000002All Organisms → cellular organisms → Bacteria182668Open in IMG/M
3300027565|Ga0209219_1117633All Organisms → cellular organisms → Bacteria → Terrabacteria group650Open in IMG/M
3300027568|Ga0208042_1013128All Organisms → cellular organisms → Bacteria → Terrabacteria group2166Open in IMG/M
3300027570|Ga0208043_1001839All Organisms → cellular organisms → Bacteria8004Open in IMG/M
3300027591|Ga0209733_1016534All Organisms → cellular organisms → Bacteria → Terrabacteria group1977Open in IMG/M
3300027625|Ga0208044_1125278All Organisms → cellular organisms → Bacteria → Terrabacteria group729Open in IMG/M
3300027629|Ga0209422_1008708All Organisms → cellular organisms → Bacteria → Terrabacteria group2503Open in IMG/M
3300027648|Ga0209420_1134548All Organisms → cellular organisms → Bacteria → Terrabacteria group685Open in IMG/M
3300027660|Ga0209736_1058252All Organisms → cellular organisms → Bacteria → Terrabacteria group1088Open in IMG/M
3300027842|Ga0209580_10156916All Organisms → cellular organisms → Bacteria → Terrabacteria group1121Open in IMG/M
3300027884|Ga0209275_10638195All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium612Open in IMG/M
3300027889|Ga0209380_10006887All Organisms → cellular organisms → Bacteria6784Open in IMG/M
3300027889|Ga0209380_10021782All Organisms → cellular organisms → Bacteria3626Open in IMG/M
3300027889|Ga0209380_10034136All Organisms → cellular organisms → Bacteria → Terrabacteria group2874Open in IMG/M
3300027889|Ga0209380_10329507All Organisms → cellular organisms → Bacteria → Terrabacteria group897Open in IMG/M
3300027895|Ga0209624_10495606All Organisms → cellular organisms → Bacteria → Terrabacteria group813Open in IMG/M
3300027905|Ga0209415_10048103All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi5559Open in IMG/M
3300027908|Ga0209006_10399469All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1158Open in IMG/M
3300028047|Ga0209526_10305934All Organisms → cellular organisms → Bacteria → Terrabacteria group1075Open in IMG/M
3300028047|Ga0209526_10674535All Organisms → cellular organisms → Bacteria → Terrabacteria group654Open in IMG/M
3300028742|Ga0302220_10066937All Organisms → cellular organisms → Bacteria → Terrabacteria group1465Open in IMG/M
3300028808|Ga0302228_10067629All Organisms → cellular organisms → Bacteria1700Open in IMG/M
3300028906|Ga0308309_10132436All Organisms → cellular organisms → Bacteria → Terrabacteria group1981Open in IMG/M
3300028906|Ga0308309_11019938All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium717Open in IMG/M
3300029882|Ga0311368_10555166All Organisms → cellular organisms → Bacteria → Terrabacteria group817Open in IMG/M
3300030007|Ga0311338_10312950All Organisms → cellular organisms → Bacteria → Terrabacteria group1727Open in IMG/M
3300030007|Ga0311338_10922704All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium856Open in IMG/M
3300030494|Ga0310037_10060514All Organisms → cellular organisms → Bacteria → Terrabacteria group1791Open in IMG/M
3300030520|Ga0311372_12109872All Organisms → cellular organisms → Bacteria → Terrabacteria group654Open in IMG/M
3300031670|Ga0307374_10016919All Organisms → cellular organisms → Bacteria9624Open in IMG/M
3300031671|Ga0307372_10293507All Organisms → cellular organisms → Bacteria → Terrabacteria group923Open in IMG/M
3300031708|Ga0310686_117607084All Organisms → cellular organisms → Bacteria3346Open in IMG/M
3300031753|Ga0307477_10722885All Organisms → cellular organisms → Bacteria → Terrabacteria group665Open in IMG/M
3300031754|Ga0307475_10356271All Organisms → cellular organisms → Bacteria → Terrabacteria group1176Open in IMG/M
3300031962|Ga0307479_11748421All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium575Open in IMG/M
3300032783|Ga0335079_10134273All Organisms → cellular organisms → Bacteria → Terrabacteria group2787Open in IMG/M
3300033158|Ga0335077_11135541All Organisms → cellular organisms → Bacteria → Terrabacteria group770Open in IMG/M
3300033807|Ga0314866_087484All Organisms → cellular organisms → Bacteria → Terrabacteria group550Open in IMG/M
3300033808|Ga0314867_034451All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1190Open in IMG/M
3300033829|Ga0334854_142698Not Available580Open in IMG/M
3300034124|Ga0370483_0089167All Organisms → cellular organisms → Bacteria1007Open in IMG/M
3300034199|Ga0370514_044404All Organisms → cellular organisms → Bacteria → Terrabacteria group1113Open in IMG/M
3300034199|Ga0370514_193116All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium530Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil16.35%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil12.50%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil12.50%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost7.69%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa5.77%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil4.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.81%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil3.85%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.88%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost2.88%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.88%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil2.88%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.92%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.92%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland1.92%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil1.92%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa1.92%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.92%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil1.92%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil1.92%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.96%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.96%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2140918007Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_allEnvironmentalOpen in IMG/M
3300000567Peat soil microbial communities from Weissenstadt, Germany - SII-2010EnvironmentalOpen in IMG/M
3300001356Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007EnvironmentalOpen in IMG/M
3300001536Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001538Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300005952Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045EnvironmentalOpen in IMG/M
3300006055Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300009522Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaGEnvironmentalOpen in IMG/M
3300009524Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaGEnvironmentalOpen in IMG/M
3300009661Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062EnvironmentalOpen in IMG/M
3300009683Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaGEnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010866Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010876Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010880Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300014052Permafrost microbial communities from Nunavut, Canada - A23_35cm_12MEnvironmentalOpen in IMG/M
3300014169Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaGEnvironmentalOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300014495Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300017948Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300019786Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300023255Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 10-14EnvironmentalOpen in IMG/M
3300025588Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025627Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025664Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025857Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212 (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027565Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027568Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027570Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027591Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027625Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027629Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027648Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027660Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028742Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3EnvironmentalOpen in IMG/M
3300028808Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029882III_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030494Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)EnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300031670Soil microbial communities from Risofladan, Vaasa, Finland - OX-3EnvironmentalOpen in IMG/M
3300031671Soil microbial communities from Risofladan, Vaasa, Finland - OX-1EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033807Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_10EnvironmentalOpen in IMG/M
3300033808Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20EnvironmentalOpen in IMG/M
3300033829Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5EnvironmentalOpen in IMG/M
3300034124Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14EnvironmentalOpen in IMG/M
3300034199Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
A_all_C_028226702140918007SoilMTGEIQDAPRPRRRCERCGGEVRFSHREYAGRGTSAAVLRCVACGEVVRDAAREAPQASQRHRSKHHRDLDAGPPENPVLDPTIAARLLDSTRDSS
JGI12270J11330_1006060643300000567Peatlands SoilMMDDALRETRPRRRCAKCGGELRFSHREYAGKGTSSSVLRCTACGDVLRDAARQTAQAPQRHTSKRHRDLDAGPLANPVIDPELAARLLESTSDSG*
JGI12269J14319_10000170153300001356Peatlands SoilMDDAXRETRPRRRCAKCGGELRFSHREYAGKGTSSSVLRCTACGDVLRDAARQTAQAPQRHTSKRHRDLDAGPLANPVIDPELAARLLESTSDSG*
A1565W1_1009312253300001536PermafrostMTVGPSATPKPRRRCAGCGGELKFSHREYAGRGTSAAVLRCTGCGEVTRDAAREAPQAAQRHRSKHHRDLEEGPPANPVLDPITAARLLDSTRDST*
A10PFW1_1095295043300001538PermafrostMTVDPSATRKPRRRCAGCGGELKFSHREYAGRGTSAALLRCTGCGEVTRDAAREAPQAAQRHRSKHHRDLEEGPPSNPVLDPITAARLLESTRDPS*
JGI12635J15846_1007944833300001593Forest SoilMRFSHREYAGRGTSAAVLRCAACGDVIRDAARETVQAPQRHTSKHHRDLDAGPPANPVIDPELAARLLESTRDPG*
JGI12635J15846_1079361323300001593Forest SoilELAFSHREYASRGTSAAVLRCKTCGDVVRDAAREAPPAAQRHKSKHHRELDAGPPANPVLDPITAARLLESSRDSS*
JGIcombinedJ26739_10083004213300002245Forest SoilMTTGTPAETKPRRRCAKCGGELRFSHREYAGRGTSAVVLRCAACGDVIHDAARETVQAPQRHTSKRHRDLDEGPPPNPVIDPELAARLLESSDDPG*
Ga0062595_10052321423300004479SoilMTADAPRETRPRRRCPQCGGELRFSHREYAGRGTSAAVLRCTSCGDVVRDAAREAAQAPQRHTSKHHRDLDAGPPANPVLDP
Ga0070714_10120860613300005435Agricultural SoilMMTADAPRETRPRRRCPQCGGELRFSHREYAGRGTSAAVLRCTSCGDVVRDAAREAAQAPQRHTSKHHRDLDAGPPANPVLDPEVAARLLESSRDSG*
Ga0070732_1022944013300005542Surface SoilMRFSHREYAGRGTSAAVLRCAACGDVIRDAARETVQAPQRHTSKHHRDLDAGPLANPVIDPELAARLLDSTGDPG*
Ga0070732_1048759123300005542Surface SoilMSAAVLRCAGCGDVVRDAAREPAQGPQRHTSKRHRDLDAGPPANPVLDPELAARLLDATRDSG*
Ga0070761_1009591233300005591SoilMPSDLPAESKPRRRCPSCGAELRFSHREYAGKGASAAVLRCTGCGEVIRDGARESVQAPQRHTSKRHRELDAGPPENPVIDPELAAKLLRASRDSS*
Ga0070766_1000993853300005921SoilMNSETPREPRPRRRCAQCGGELRFSHREYAGRGTSAAVLRCAGCGDVIRDAARETSQAPQRHTSKRHRDLDAGPLENPVIDPALAARLLESDRDPS*
Ga0070766_1005768433300005921SoilMPSDTPAESKPRRRCPSCGAELRFSHREYAGKGASAAVLRCTGCGEVIRDSARESVQAPQRHTSKRHRELDAGPPENPVIDPELAARLLQASRDSG*
Ga0070766_1006075013300005921SoilETRPRRRCAKCGGELRFSHREYAGKGTSAAILRCAACGDVVHDGARETINRPQRHTSKHHRDLDAGPPANPVIDPALAARLLESTHDSG*
Ga0070766_1092671223300005921SoilLRFSHREYAGKGASAAVLRCTGCGDVIRDSARESVQAPQRHTSKRHRDLEAGPPENPVLDPELAAKLLQASRDSS*
Ga0080026_1019153013300005952Permafrost SoilFSHREYAGRGTSSAVLRCTGCGDVIRDSAREAAPTKQRHTSKRHRDLDAGPLENPVIDPELAARLLESTGESN*
Ga0097691_103638033300006055Arctic Peat SoilACGDVIRDAARETAKTPQRHTSKRHRDLDQGPPANPVIDPELAARLLESTRDSG*
Ga0070765_100002405113300006176SoilMTSEAPNQTRPRRRCAKCGGELRFSHREYAGKGTSAAILRCAACGDVVHGGARETINRPQRHTSKHHRDLDAGPPANPVIDPALAARLLESTHDSG*
Ga0070765_10014996723300006176SoilMTAGTSSEPRPRRRCAKCGGEMRFSHREYAGRGTSAAVLRCAACGEVIHDAARETVQAPQRHTSKHHRDLDAGPPANPVIDPELAARLLESTRDPG*
Ga0070765_10093345623300006176SoilMPADSPAESKPRRRCPSCGGDLRFSHREYAGKGASAAVLRCTGCGEVIRDSARESVQAPQRHTSKRHRELDAGPPENPVLDPELAARLLQASRDSS*
Ga0070765_10096435523300006176SoilMSSIDVTRDSKPRRRCAKCGGDLRFSHREYAGKGMSAAVLRCAGCGDVIHDTARESAPVQQRHTSKRHRDLDAGPPANPVLDPEIAARLLDSTRDSG*
Ga0070765_10184736723300006176SoilMMVGDTPTDAKPRRRCPSCGGELRFSHREYAGKGTAAAVMRCAGCGEVVRDAARAAPQATQRHRSKNHRDLEEGPPANP
Ga0116218_116080713300009522Peatlands SoilRRCAKCGGELRFSHREYAGKGTSSSVLRCTACGDVLRDAARQTAQAPQRHTSKRHRDLDAGPLANPVIDPELAARLLESTSDSG*
Ga0116225_1005348113300009524Peatlands SoilLRCTACGDVLRDAARQTAQAPQRHTSKRHRDLDAGPLANPVIDPELAARLLESTSDSG*
Ga0105858_130319123300009661Permafrost SoilFSHREYAGRGTSSAVLRCTACGDVIRDSAREAAPTKQRHTSKRHRDLDAGPLENPVIDPELAARLLESTGESN*
Ga0116224_1034298213300009683Peatlands SoilMNNDPIAGTKPRRRCAQCGGELRFSHREYAGKGTSAAVLRCVSCGDAVRDAAREAVQATQRHRSKHHRDLEEGPPANPVLDPSIAAR
Ga0116216_1000287983300009698Peatlands SoilMMDDAPRETRPRRRCAKCGGELRFSHREYAGKGTSSSVLRCTACGDVLRDAARQTAQAPQRHTSKRHRDLDAGPLANPVIDPELAARLLESTSDSG*
Ga0116216_1005329043300009698Peatlands SoilMNNDPIAGTKPRRRCAQCGGELRFSHREYAGKGTSAAVLRCVSCGDAVRDAAREAVQATQRHRSKHHRDLEEGPPANPVLDPSIAARLLESTRDST*
Ga0136449_10000419953300010379Peatlands SoilMMDDALRETRPRRRCAKCGGELRFSHREYAGKGTSSSVLRCTACGDVLRDAARQTAQAPQRHTSKRHRDLDAGPLANPVIDPELAAWLLESTSDSG*
Ga0126344_119139123300010866Boreal Forest SoilMSIDVSRESRPRRRCAKCGGDLRFSHREYAGKGMSAAVLRCAGCGDVIHDTARESAPVPQRHTSKRHRDLDAGPPANPVLDPEIAARLLDSTRDSG*
Ga0126361_1049730323300010876Boreal Forest SoilMSIDVSRESRPRRRCAKCGGDLRFSHREYAGKGMSAAVLRCAGCGDVIHDTARESAPVPQRHTSKRHRDLDAGPPANPVLDPEIAARLLDSSRDSG*
Ga0126350_1024544063300010880Boreal Forest SoilMRLSHREYAGRGTSAAVLRCAACGDVIRDAARETVQAPQRHMSKRHRDLDEGPPPNPVIDPEIAARLLESSGDPG*
Ga0126350_1104498233300010880Boreal Forest SoilMTLAPSDTPKPRRRCPACGGELTFSHREYAGKGASAAVLRCRMCGEVIRDAAREAQQPVQRHKSKHHRDLEAGPPANPVLDPSIAARLLESTSDSS*
Ga0120109_111578223300014052PermafrostMRFSHREYAGRGTSAPVLRCAACGDVIRDAARETVQAPQRHTSKHHRDLDAGPPANPVIDPELAARLLESTRDRG*
Ga0181531_1003919323300014169BogMRFSHREYAGKGTSAGVLRCAACGDVIRDAARETVQAPQRHTSKHHRDLDAGPPANPVIDPELAARLLQPGRDSG*
Ga0182018_1001544823300014489PalsaMSIDAPRETKPRRRCAKCGGDMRFSHREYAGKGMSAAVLRCVSCGDVIRDAAREAAQVTQRHTSKRHRDLDAGPLANPVLDPDIAAQLLESTRDSS*
Ga0182015_10003167163300014495PalsaMSIDAPRETKPRRRCAKCGGDMRFSHREYAGKGMSAAVLRCLSCGDVIRDAAREAAQVTQRHTSKRHRDLDAGPLANPVLDPDIAARLLESTRDSG*
Ga0182024_10000773833300014501PermafrostMSIDVPREAKPRRRCPKCGGDMRFSHREYARKGMSAAVLRCASCGDVIRDAAREGAQAVQRHTSKRHRDLDAGPPPNPVLDPEMAARLLESTRDSG*
Ga0182024_10001498593300014501PermafrostMQRDTPPETRPRRRCAQCGGELRFSHREYAGKGSSAAVLRCAACGVVTRDAARATTQTPQRHTSKRHRDLEAGPLENPVLDPKLAARLLDSVRDSG*
Ga0182024_1002389393300014501PermafrostMSTDVPGETKPRRRCAKCGGDVRFSHREYAGKGMSAAVLRCAGCGDVIRDTARESAPVPQRHTSKRHRDLDAGPPANPVIDPEIAARLLESTRDSG*
Ga0182024_1014330713300014501PermafrostEYAGKGMSAAVLRCAGCGDVIRDTARETSPVPQRHTSKRHRDLDAGPPANPVLDPEIAARLLESTRDLG*
Ga0182024_1017080233300014501PermafrostMSIDVPRESKPRRRCGKCGGDLRFSHREYAGKGMSAAVLRCAGCGDVIHDTARESAPVPQRHSSKRHRDLDAGPPANPVLDPEIAARLLESTRDSG*
Ga0182024_1049249023300014501PermafrostMSIDGPRESKPRRRCAKCGGDMRFSHREYAGKGMSAAVLRCVSCGDVIRDAAREAAQVTQRHTSKRHRDLDAGPLANPVLDPDIAAQLLESTRDSS*
Ga0182024_1121738823300014501PermafrostRCAKCGGELRFSHREYAGRGASAAVLRCAACSDVIHDAARETVQAPQRHTSKRHRDLNEGPPPNPVIDPELAARLLESSGDPG*
Ga0187847_1062125213300017948PeatlandPRTLEPMPSDPPAESKPRRRCPSCGAELRFSHREYAGKGASAAVLRCTGCGEVIRDSARESVQAPQRHTSKRHRELDAGPPENPVIDPELAARLLQASRDSS
Ga0187779_1060357523300017959Tropical PeatlandAVLRCASCGDVVRDAARETVQAAQRHRSKRHRDLEAGPPANPVLDPSIAARLMESTREQT
Ga0187863_1080524223300018034PeatlandMPSDPPAESKPRRRCPSCGAELRFSHREYAGKGASAAVLRCTGCGEVIRDSARESVQAPQRHTSKRHRELDAGPPENPVIDPELAARLLQASRDSS
Ga0182025_115241023300019786PermafrostVRFSHREYAGKGMSAAVLRCAGCGDVIRDTARESAPVPQRHTSKRHRDLDAGPPANPVIDPEIAARLLESTRDSG
Ga0210383_1032078633300021407SoilMPNDTPAESKPRRRCPSCGAELRFSHREYAGKGASAAVLRCTGCGEVIRDSARESVQAPQRHTSKRHRELDAGPPENPVIDPELAARLLRTSRDSG
Ga0210383_1071442523300021407SoilMSVDVTRENKPRRRCAKCGGDLRFSHREYAGKGMSAAVLRCAGCGDVIHDTARESAPVQQRHTSKRHRDLDAGPPANPVLD
Ga0210394_1002654723300021420SoilLRFSHREYAGRGTSAAVLRCAACGDVIHDAARETVQAPQRHTSKRHRDLDEGPPPNPVIDPELAARLLESSGDRG
Ga0210394_1070834723300021420SoilKCGGDLRFSHREYAGKGMSAAVLRCAGCGDVIHDTARESAPVQQRHTSKRHRDLDAGPPANPVLDPEIAARLLDSTRDPG
Ga0210410_1105038823300021479SoilMSSIDVTRDSKPRRRCAKCGGDLRFSHREYAGKGMSAAVLRCAGCGDVIHDTARESAPVQQRHTSKRHRDLDAGPPANPVLDPEIAARLLDSTRDSG
Ga0224547_102249123300023255SoilLRFSHREYAGKGTSAAVMRCSGCGDVIRDGARESIQAPQRHTSKRHRDLDAGPPANPVLDPELAAKLLQAGGDSS
Ga0208586_106994613300025588Arctic Peat SoilMSIDVARDTKPRRRCAKCGGDMRFSHREYAGKGMSAAVLRCAGCGDVIRDTARETSPVPQRHTSKRHRDLDAGPPANPVLDPEIAARLLEST
Ga0208220_104999023300025627Arctic Peat SoilRTLGSMSGEAQPVPRPRRRCAKCGGEVRFSHREYAGQGTSAAVLRCAACGDVIRDAARETVKTPQRHTSKRHRDLDQGPPANPVIDPELAARLLESTRDSG
Ga0208849_100036053300025664Arctic Peat SoilMSGEAQPVPRPRRRCAKCGGEVRFSHREYAGQGTSAAVLRCAACGDVIRDAARETAKTPQRHTSKRHRDLDQGPPANPVIDPELAARLLESTRDSG
Ga0209014_1012903213300025857Arctic Peat SoilAVLRCAACGDVIRDAARETAKTPQRHTSKRHRDLDQGPPANPVIDPELAARLLESTRDSG
Ga0207664_1103141423300025929Agricultural SoilMMTADAPRETRPRRRCPQCGGELRFSHREYAGRGTSAAVLRCTSCGDVVRDAAREAAQAPQRHTSKHHRDLDAGPPANPVLDPEVAARLLESSRDSG
Ga0209219_10000021223300027565Forest SoilMTVDPHDTPKRRRRCPGCGGELAFSHREYAGRGTSAAVLRCRACGDVVRDSAREAPQATQRHQSKHHRDLDAGPPANQVLDPIIAARLLESTRDTS
Ga0209219_111763313300027565Forest SoilRCASCGGELKFSHREYAGRGASAAVLRCAGCGEVTRDAAREAPQAAQRHRSKHHRDLEEGPPANPVLDPITAARLLESKRDST
Ga0208042_101312823300027568Peatlands SoilMMDDAPRETRPRRRCAKCGGELRFSHREYAGKGTSSSVLRCTACGDVLRDAARQTAQAPQRHTSKRHRDLDAGPLANPVIDPELAARLLESTSDSG
Ga0208043_100183933300027570Peatlands SoilMMDDALRETRPRRRCAKCGGELRFSHREYAGKGTSSSVLRCTACGDVLRDAARQTAQAPQRHTSKRHRDLDAGPLANPVIDPELAARLLESTSDSG
Ga0209733_101653433300027591Forest SoilMTTGTPAETKPRRRCAKCGGELRFSHREYAGRGTSAVVLRCAACGDVIHDAARESVQAPQRHTSKRHRDLDEGPPPNPVIDPELAARLLESSGDPG
Ga0208044_112527823300027625Peatlands SoilKGTSSSVLRCTACGDVLRDAARQTAQAPQRHTSKRHRDLDAGPLANPVIDPELAARLLESTSDSG
Ga0209422_100870833300027629Forest SoilMTTGTPAETKPRRRCAKCGGELRFSHREYAGRGTSAVVLRCAACGDVIHDAARETVQAPQRHTSKRHRDLDEGPPPNPVIDPELAARLLESSDDPG
Ga0209420_113454823300027648Forest SoilMRFSHREYAGKGASAAVLRCSGCGDVVRDAARDAPQAVQRHRSKHHRDLDAGPLENPVLDPGIAARLLESTRDSS
Ga0209736_105825223300027660Forest SoilMRFSHREYAGRGTSAAVLRCAACGDVIRDAARETVQAPQRHTSKHHRDLDAGPPANPVIDPELAARLLESTRDPG
Ga0209580_1015691613300027842Surface SoilMRFSHREYAGRGTSAAVLRCAACGDVIRDAARETVQAPQRHTSKHHRDLDAGPLANPVIDPELAARLLDSTGDPG
Ga0209275_1063819513300027884SoilMPAEPTESKPRRRCPTCGGELRFSHREYAGKGASAAVLRCTGCGDVIRDSARESVQAPQRHTSKRHRDLDAGPPENPVLDPELAAKLLQAGRDSS
Ga0209380_1000688733300027889SoilMTSEAPNQTRPRRRCAKCGGELRFSHREYAGKGTSAAILRCAACGDVVHGGARETINRPQRHTSKHHRDLDAGPPANPVIDPALAARLLESTHDSG
Ga0209380_1002178243300027889SoilMPSDTPAESKPRRRCPSCGAELRFSHREYAGKGASAAVLRCTGCGEVIRDSARESVQAPQRHTSKRHRELDAGPPENPVIDPELAARLLQASRDSG
Ga0209380_1003413633300027889SoilMNSETPREPRPRRRCAQCGGELRFSHREYAGRGTSAAVLRCAGCGDVIRDAARETSQAPQRHTSKRHRDLDAGPLENPVIDPALAARLLESDRDPS
Ga0209380_1032950723300027889SoilMPAEPTESKPRRRCPTCGGELRFSHREYAGKGASAAVLRCTGCGDVIRDSARESVQAPQRHTSKRHRDLEAGPPENPVLDPELAAKLLQASRDSS
Ga0209624_1049560623300027895Forest SoilMTIDAPRETKPRRRCAKCGGDMRFSHREYAGKGMSAAVLRCVSCGDVIRDSAREAAQVTQRHTSKRHRDLDAGPLANPVLDPDIAARLLESTRDSG
Ga0209415_1004810363300027905Peatlands SoilMNNDPIAGTKPRRRCAQCGGELRFSHREYAGKGTSAAVLRCASCGDAVRDAAREAVQATQRHRSKHHRDLEEGPPANPVLDPSIAARLLESTRDST
Ga0209006_1039946923300027908Forest SoilVSSIDVTRDSKPRWRCAKCGGDLRFSHREYAGKGMSAAVLRCTGCGDVIHDTARESAPVTQRHTSKRHRDLDAGPPANPVLDPEIAARLLDSSRDSG
Ga0209526_1030593423300028047Forest SoilVLRCAACGDVIRDAARETVQAPQRHTSKHHRDLDAGPPANPVIDPELAARLLESTRDPG
Ga0209526_1067453523300028047Forest SoilRHVRRRRKPRRRCAKCGGELRFSHREYAGRGTSAVVLRCAACGDVIHDAARETVQAPQRHTSKRHRDLDEGPPPNPVIDPELAARLLESSDDPG
Ga0302220_1006693723300028742PalsaMATDAPTESKPRRRCRSCGGELRFSHREYAGKGASAAVLRCAGCGEVIRDSARESVQAPQRHTSKRHRNLDAGPPANPVLDPELAARLLQAGRDSV
Ga0302228_1006762933300028808PalsaYAGKGASAAVLRCAGCGEVIRDSARESVQAPQRHTSKRHRNLDAGPPANPVLDPELAARLLQAGRDSV
Ga0308309_1013243623300028906SoilMTAGTSSEPRPRRRCAKCGGEMRFSHREYAGRGTSAAVLRCAACGEVIHDAARETVQAPQRHTSKHHRDLDAGPPANPVIDPELAARLLESTRDPG
Ga0308309_1101993823300028906SoilMSSIDVTRDSKPRRRCAKCGGDLRFSHREYAGKGMSAAVLRCAGCGDVIHDTARESAPVQQRHTSKRHRDLDAGPPPNPVLDPEIAARLLDSTRDSG
Ga0311368_1055516613300029882PalsaVIRDSARESVQAPQRHTSKRHRNLDAGPPANPVLDPELAARLLQAGRDSV
Ga0311338_1031295033300030007PalsaMRFSHREYAGKGTSAGVLRCAACGDVIRDAARETVQAPQRHTSKRHRDLDAGPPANPVIDPELAARLLQSSRDSG
Ga0311338_1092270423300030007PalsaMTGEMAAETKPKRRCPSCGAELRFSHREYAGRGTSAAVLRCSGCGEVVRDAAREATQATQRHKSKHHRDLDAGPLENPVLDPSIAARLLESTRDAS
Ga0310037_1006051433300030494Peatlands SoilMNNDPIAGTKPRRRCAQCGGELRFSHREYAGKGTSAAVLRCVSCGDAVRDAAREAVQATQRHRSKHHRDLEEGPPANPVLDPSIAARLLESTRDST
Ga0311372_1210987223300030520PalsaMTGEMAAETKPKRRCPSCGAELRFSHREYAGRGTSAAVLRCSGCGEVVRDAAREATQATQRHKSKHHRDLDAGPLENPVLD
Ga0307374_1001691963300031670SoilMRFSHREYAGKGMTAAVLRCAGCGDVVRDAARAAAQQAQRHHSRHHRDLDEGPPANPVIDPEIAARLLDSTRDSG
Ga0307372_1029350713300031671SoilMTGETARETRPRRRCAKCGGEVRFSHREYAGKGTSAAVLRCAACGEVIRDAARETVQAPQRHTSKRHRDLDAGPPANPVLDPELAARLLESTRDP
Ga0310686_11760708423300031708SoilMASDTPVDSKPRRRCAACGGELRFSHREYAGKGTSAAVLRCAGCGNVTRDSARESVQAPQRHTSKRHRDLDAGPLENPVIDPELAARLLQAGRDSG
Ga0307477_1072288523300031753Hardwood Forest SoilMRFSHREYEGRGTSAAVLRCAACGDVIRDAARETVQAPQRHTSKHHRDLDAGPPANPVIDPEVAARLLESTRDPG
Ga0307475_1035627113300031754Hardwood Forest SoilMRFSHREYAGRGTSAAVLRCAACGDVIRDAAREAVRAPQRHTSKHHRDLDAGPPANPVIDPEVAARLLESTRDPG
Ga0307479_1174842123300031962Hardwood Forest SoilMRFSHREYAGRGTSAAVLRCAACGDVIRDAARETVQAPQRHTSKHHRDLDAGPPANPVIDPEVAARLLESTRDPG
Ga0335079_1013427333300032783SoilMGNDAAAETKPRRRCARCGGELRFSHREYAGKGTSAAVLRCSSCGDVVRDAARETPQAVQRHRSRSHRDLEADPPANPVLDPSIAARLLESTRDST
Ga0335077_1113554123300033158SoilMGNEDAAETKPRRRCARCGGELRFSHREYAGKGTSAAVLRCASCGDVVRDAARETPQAVQRHRSRSHRDLEAGPPANPVLDPSIAARILESTRDST
Ga0314866_087484_285_5123300033807PeatlandMVLSHREYAGRGASVAVLRCRACGDSVRDAARVMPAAVQRHRSKRHRDLDAGPLENPVIDPAIAARLLRSTPDEG
Ga0314867_034451_189_4793300033808PeatlandMSGDGSAEAAPRRRCTRCGGELRFSHREYAGKGNSVAVRRCAGCGDVVRDAPRAAAQTAQRHTSKRHRELDAGPLENPVLDPAIAARLLESTRDQS
Ga0334854_142698_6_2333300033829SoilLRFSHREYAGKGASAAVLRCAGCGEVIRDSARESVQAPQRHTSKRHRNLDAGPPANPVLDPELAARLLQAGRDSV
Ga0370483_0089167_299_5893300034124Untreated Peat SoilMPADSPAESKPRRRCPSCGGELRFSHREYAGKGASAAVLRCTGCGEVIRDSARYTVQAPQRHTSKRHRELDAGPPENPVIDPELAARLLQASRDSS
Ga0370514_044404_196_4863300034199Untreated Peat SoilMPPNSPAETKPRRRCPSCGAELRFSHREYAGKGASAAVLRCTGCGEVIRDSARYTVQAPQRHTSKRHRELDAGPPENPVIDPELAARLLQASRDSS
Ga0370514_193116_130_4203300034199Untreated Peat SoilMATNAPTQDRPRRRCPSCGGELRFSHREYAGKGTAAAVLRCAGCGDIVRDSARESVQAPQRHTSKRHRDLDAGPPANPVLDPELAAKLLQSGRDSA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.