Metagenome / Metatranscriptome Family F097748

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097748
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	79 residues
Representative Sequence	MTQQSRNENARVVCLFCGARTFVPAWATRDIVTQPESGPGIAIIRCHVCGKEAPYSTSEIFVNQEVPLHDNARSRAAGL
Number of Associated Samples	73
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.77 %
% of genes near scaffold ends (potentially truncated)	29.81 %
% of genes from short scaffolds (< 2000 bps)	75.96 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.154 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.077 % of family members)
Environment Ontology (ENVO)	Unclassified (32.692 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.077 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.74% β-sheet: 18.69% Coil/Unstructured: 77.57%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF01569	PAP2	28.85
PF00383	dCMP_cyt_deam_1	10.58
PF13263	PHP_C	4.81
PF00781	DAGK_cat	2.88
PF00326	Peptidase_S9	2.88
PF14226	DIOX_N	1.92
PF04101	Glyco_tran_28_C	1.92
PF02133	Transp_cyt_pur	1.92
PF13551	HTH_29	0.96
PF13528	Glyco_trans_1_3	0.96
PF00665	rve	0.96
PF13442	Cytochrome_CBB3	0.96
PF00483	NTP_transferase	0.96
PF03069	FmdA_AmdA	0.96
PF07638	Sigma70_ECF	0.96
PF02618	YceG	0.96
PF03548	LolA	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1597	Phosphatidylglycerol kinase, diacylglycerol kinase family	Lipid transport and metabolism [I]	5.77
COG1559	Endolytic transglycosylase MltG, terminates peptidoglycan polymerization	Cell wall/membrane/envelope biogenesis [M]	0.96
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.96
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	0.96
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.96
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.96
COG2834	Outer membrane lipoprotein-sorting protein	Cell wall/membrane/envelope biogenesis [M]	0.96
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.96
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.15 %
Unclassified	root	N/A	3.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.15 %
Unclassified	root	N/A	3.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.15 %
Unclassified	root	N/A	3.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	80.77 %
Unclassified	root	N/A	3.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	56.73 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.62 %
Unclassified	root	N/A	3.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	56.73 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.85 %
Unclassified	root	N/A	3.85 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	56.73 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.85 %
Unclassified	root	N/A	3.85 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	56.73 %
Unclassified	root	N/A	3.85 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.88 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	56.73 %
Unclassified	root	N/A	3.85 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.88 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10265248	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1093	Open in IMG/M
3300002245\|JGIcombinedJ26739_100054397	All Organisms → cellular organisms → Bacteria	3651	Open in IMG/M
3300003505\|JGIcombinedJ51221_10426017	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300004139\|Ga0058897_11033841	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300004139\|Ga0058897_11153289	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300004631\|Ga0058899_10011094	Not Available	596	Open in IMG/M
3300005167\|Ga0066672_10179162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1342	Open in IMG/M
3300005176\|Ga0066679_10055532	All Organisms → cellular organisms → Bacteria	2295	Open in IMG/M
3300005176\|Ga0066679_10836674	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300005177\|Ga0066690_10043365	All Organisms → cellular organisms → Bacteria	2708	Open in IMG/M
3300005177\|Ga0066690_10147332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1545	Open in IMG/M
3300005178\|Ga0066688_10728717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300005529\|Ga0070741_10000134	All Organisms → cellular organisms → Bacteria	290137	Open in IMG/M
3300005537\|Ga0070730_10194586	All Organisms → cellular organisms → Bacteria → Acidobacteria	1356	Open in IMG/M
3300005538\|Ga0070731_10100997	All Organisms → cellular organisms → Bacteria	1911	Open in IMG/M
3300005541\|Ga0070733_10194427	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M
3300005542\|Ga0070732_10384947	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	845	Open in IMG/M
3300005542\|Ga0070732_10591446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300005557\|Ga0066704_10462959	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300005557\|Ga0066704_10761795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300005586\|Ga0066691_10527084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300005602\|Ga0070762_10472822	Not Available	818	Open in IMG/M
3300006176\|Ga0070765_100012954	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5947	Open in IMG/M
3300006176\|Ga0070765_100320264	Not Available	1437	Open in IMG/M
3300006797\|Ga0066659_11472249	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300006797\|Ga0066659_11895193	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300006804\|Ga0079221_10034853	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2161	Open in IMG/M
3300006806\|Ga0079220_10768463	All Organisms → cellular organisms → Bacteria → Acidobacteria	722	Open in IMG/M
3300011120\|Ga0150983_11555152	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300011120\|Ga0150983_12877620	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300011120\|Ga0150983_14335766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300011120\|Ga0150983_15753564	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300011271\|Ga0137393_11369878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300011271\|Ga0137393_11384238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300012199\|Ga0137383_10233851	All Organisms → cellular organisms → Bacteria → Acidobacteria	1347	Open in IMG/M
3300012206\|Ga0137380_11415734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300012357\|Ga0137384_10100748	All Organisms → cellular organisms → Bacteria → Acidobacteria	2411	Open in IMG/M
3300012927\|Ga0137416_10738551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	867	Open in IMG/M
3300017927\|Ga0187824_10002647	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	4748	Open in IMG/M
3300017927\|Ga0187824_10033845	All Organisms → cellular organisms → Bacteria	1544	Open in IMG/M
3300017936\|Ga0187821_10004498	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	4621	Open in IMG/M
3300017994\|Ga0187822_10042663	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300018468\|Ga0066662_10152107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1752	Open in IMG/M
3300020579\|Ga0210407_10046153	All Organisms → cellular organisms → Bacteria	3247	Open in IMG/M
3300020579\|Ga0210407_11437067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300020581\|Ga0210399_10028042	All Organisms → cellular organisms → Bacteria	4492	Open in IMG/M
3300020582\|Ga0210395_10119490	All Organisms → cellular organisms → Bacteria → Acidobacteria	1956	Open in IMG/M
3300021046\|Ga0215015_10454586	All Organisms → cellular organisms → Bacteria	2629	Open in IMG/M
3300021088\|Ga0210404_10808861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300021170\|Ga0210400_10272943	All Organisms → cellular organisms → Bacteria → Acidobacteria	1385	Open in IMG/M
3300021171\|Ga0210405_10051367	All Organisms → cellular organisms → Bacteria → Acidobacteria	3263	Open in IMG/M
3300021171\|Ga0210405_10355563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1155	Open in IMG/M
3300021171\|Ga0210405_10936312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300021171\|Ga0210405_11000791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300021171\|Ga0210405_11011290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300021178\|Ga0210408_10233177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1465	Open in IMG/M
3300021402\|Ga0210385_10447309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	975	Open in IMG/M
3300021404\|Ga0210389_11148836	Not Available	599	Open in IMG/M
3300021420\|Ga0210394_10001898	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	30944	Open in IMG/M
3300021420\|Ga0210394_10037289	All Organisms → cellular organisms → Bacteria → Acidobacteria	4315	Open in IMG/M
3300021420\|Ga0210394_10042790	All Organisms → cellular organisms → Bacteria → Acidobacteria	3985	Open in IMG/M
3300021420\|Ga0210394_10681471	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	901	Open in IMG/M
3300021476\|Ga0187846_10017130	All Organisms → cellular organisms → Bacteria	3396	Open in IMG/M
3300021479\|Ga0210410_10843110	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300021559\|Ga0210409_10436854	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1168	Open in IMG/M
3300021559\|Ga0210409_11423219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300022504\|Ga0242642_1089038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300022724\|Ga0242665_10095324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300026298\|Ga0209236_1023415	All Organisms → cellular organisms → Bacteria → Acidobacteria	3414	Open in IMG/M
3300026317\|Ga0209154_1112849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1153	Open in IMG/M
3300026318\|Ga0209471_1286456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300026334\|Ga0209377_1010885	All Organisms → cellular organisms → Bacteria → Proteobacteria	5090	Open in IMG/M
3300026335\|Ga0209804_1005235	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7348	Open in IMG/M
3300026529\|Ga0209806_1183164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300026551\|Ga0209648_10049665	All Organisms → cellular organisms → Bacteria → Acidobacteria	3597	Open in IMG/M
3300027565\|Ga0209219_1057348	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	971	Open in IMG/M
3300027635\|Ga0209625_1023253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1378	Open in IMG/M
3300027748\|Ga0209689_1376314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300027773\|Ga0209810_1076322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1600	Open in IMG/M
3300027867\|Ga0209167_10256273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	940	Open in IMG/M
3300027867\|Ga0209167_10264698	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	925	Open in IMG/M
3300027889\|Ga0209380_10209402	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1145	Open in IMG/M
3300027911\|Ga0209698_11169838	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300027986\|Ga0209168_10650695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300028047\|Ga0209526_10193388	All Organisms → cellular organisms → Bacteria	1412	Open in IMG/M
3300028047\|Ga0209526_10307538	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1071	Open in IMG/M
3300028906\|Ga0308309_11237977	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300028906\|Ga0308309_11823564	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300030991\|Ga0073994_12094805	All Organisms → cellular organisms → Bacteria → Acidobacteria	1718	Open in IMG/M
3300031718\|Ga0307474_10894228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300031753\|Ga0307477_10182960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1460	Open in IMG/M
3300031754\|Ga0307475_10004239	All Organisms → cellular organisms → Bacteria	8842	Open in IMG/M
3300031754\|Ga0307475_10213436	All Organisms → cellular organisms → Bacteria → Acidobacteria	1544	Open in IMG/M
3300031823\|Ga0307478_10640742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	889	Open in IMG/M
3300031823\|Ga0307478_11394151	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300031823\|Ga0307478_11576282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300031962\|Ga0307479_10026820	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	5473	Open in IMG/M
3300032180\|Ga0307471_100012642	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5775	Open in IMG/M
3300032180\|Ga0307471_100517616	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1343	Open in IMG/M
3300032180\|Ga0307471_101354138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300032180\|Ga0307471_101816465	All Organisms → cellular organisms → Bacteria → Acidobacteria	761	Open in IMG/M
3300032180\|Ga0307471_103340412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300032783\|Ga0335079_11086932	All Organisms → cellular organisms → Bacteria → Acidobacteria	811	Open in IMG/M
3300032892\|Ga0335081_10011933	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	14065	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.19%
Aquatic	Environmental → Aquatic	4.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.23%
Freshwater	Environmental → Aquatic → Freshwater	3.85%
Sediment	Environmental → Aquatic → Sediment	0.96%
Cave	Environmental → Terrestrial → Cave	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.08%
Loam	Environmental → Terrestrial → Soil → Loam	19.23%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.58%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	19.23%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	19.23%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.35%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	13.46%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	12.50%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	9.62%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.77%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.77%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_102652482	3300001593	Forest Soil	MTQQSRNENARVVCLFCGARTFVPASATRDTAHQPESGPGIALIRCHVCCKEAPYSTSEIFVPQEVSLHDSNARSRAAGL*
JGIcombinedJ26739_1000543973	3300002245	Forest Soil	MTQQSRNENARVVCLFCGARTFVPAWATRDIVTQPDSASGIAIIRCHVCGKEAPYSTSEIFVNQEVPLTNDNSRSRAAGL*
JGIcombinedJ51221_104260171	3300003505	Forest Soil	MTQQSRNENARVVCLFCGARTFVPAWATRDIVTQPESGPGIAIIRCHVCGKEAPYSTNEIFVNQEVPLHDSNARSRAAGL*
Ga0058897_110338412	3300004139	Forest Soil	MTQQPRNENARVVCLFCGTRTFVPASPARDAASLLESGPGIALIRCHLCRKEAPYSASDIFLAQEVPLSDENSRSRAAGL*
Ga0058897_111532892	3300004139	Forest Soil	PCREGRMTQQSRNENARVVCLFCGARTFVPASATRDTAHQQESGPGIALIRCHVCCKEAPYSTSEIFVPQEVSLDSNARSRAAGF*
Ga0058899_100110941	3300004631	Forest Soil	VVCLFCGARTFVPAWATRDIVTQPESGPGIAIIRCHVCGKEAPYSTNEIFVNQEVPLHDSNARSRAAGL*
Ga0066672_101791622	3300005167	Soil	MTQKPINENARVVCLFCGTRTFVPAFPAREIINQPDSGPGITIVRCHLCRKEAPYAASEIFLAQEVPLSDSNSRSRAAGL*
Ga0066679_100555323	3300005176	Soil	MTQKPRNENARVVCLFCGTSTFVPASHSRDIANQPDSGAGITIIRCHVCRKEAPYSASEIFQLQEASLPGDNSRSRAAGF*
Ga0066679_108366741	3300005176	Soil	MTQKLRNESGRVVVCLFCGTRAFVPLSTARDTLNLPTSVPGVTLVRCQICRKEAPYSASEIFSNPEVSLSDESSRSRAAGL*
Ga0066690_100433651	3300005177	Soil	MTQKPINENARVVCLFCGTRTFVPAFPAREIINQPDSGPGITIVRCHLCRKEAPYAASEIFLAQEVPLSDSNSRSRAAGH*
Ga0066690_101473321	3300005177	Soil	MTQKPRNENARVICLFCGTRTFVPAFPARDIVNQPDSGPGVSLVRCHVCRKEAPYSASEIFLTQEVPLPDGNSRTRAAGL*
Ga0066688_107287171	3300005178	Soil	MTRKLRNESGRVVVCLFCGTRAFVPLSTARDTLNLPTSAPGVTLVRCHLCRKEAPYSASEIFSNPEVSLSDESSRSRAAAGL*
Ga0070741_10000134152	3300005529	Surface Soil	MTQKRRNENARVVCLFCGTPTFVPQFPSLDTHDEGDLGAGITLVRCHICRKEAPYAASEIFSIQEIPPSEDSTRTRAAGL*
Ga0070730_101945862	3300005537	Surface Soil	MTQQSRNENARVVCLFCGARTFVPASATRDTANQPESGSGIALIRCHVCRKEAPYSTSEMFVPQEVSLDSSARSRAAGL*
Ga0070731_101009973	3300005538	Surface Soil	MAQKLRNESGRVVVCLFCGTRTFVPASAARDIVHMPDFGPGVTLIRCHSCGKEAPYSASEIFQNQDVSVTESNARSRAAGL*
Ga0070733_101944272	3300005541	Surface Soil	MIASPLRAKPSWEGPMTQQSRNENARVVCLFCGARTFVPVSATRDMLNELDSGPSISIIRCHVCCKEAPYSASEIFLTQEVPLSEANSRSRAAGL*
Ga0070732_103849472	3300005542	Surface Soil	MVQKLRNESGRVVVCLFCGTRTFVPASPARDTVNLPESGTGVTLVRCHVCCKEAPYSASEIFRNPEVSLPDDNSRCRAAGL*
Ga0070732_105914461	3300005542	Surface Soil	MTQQSRNENARVVCLFCGARTFVPAWATRDIVTQPDSASGIAIIRCHVCGKEAPYSTSEIFVNQEVPLQGNSRTRAAGL*
Ga0066704_104629592	3300005557	Soil	PLSSNPCREGRMTQKPRNENARVVCLFCGTSTFVPASHSRDIANQPDSGAGITIIRCHVCRKEAPYSASEIFQLQEASLPGDNSRSRAAGF*
Ga0066704_107617951	3300005557	Soil	LYDRGPLSSNPCREGRMTQKPRNENARVVCLFCGTSTFVPASPVRDLANQPDYGPGISIVRCHVCRKEAPYSASEVFQLQDASLPEGDSRSRAAGI*
Ga0066691_105270841	3300005586	Soil	SSNSCREGRMTQKPINENARVVCLFCGTRTFVPAFPAREIINQPDSGPGITIVRCHLCRKEAPYAASEIFLAQEVPLSDSNSRSRAAGL*
Ga0070762_104728221	3300005602	Soil	VVCLFCGARTFVPAWATRDIVTQPDSGSSIAIIRCHVCGKEAPYSTNEIFVNQEVPLHDSNARSRAAGL*
Ga0070765_1000129543	3300006176	Soil	MAQKLRNESGRVVVCLFCGTRTFVPASAARDIVHMPDFGPGVTLIRCHSCGKEAPYSASEIFQNQDVSVTENNARSRAAGL*
Ga0070765_1003202641	3300006176	Soil	CREGRMTQQSRNENARVVCLFCGARTFVPASATRDTAHQPESGPGIALIRCHVCCKEAPYSTSEIFVPQEVSLHDSNARSRAAGL*
Ga0066659_114722492	3300006797	Soil	MTQKPRNENARVVCLFCGTSTFVPASHSRDIANQPDSGAGITIVRCHVCRKEAPYSASEIFQLQE
Ga0066659_118951931	3300006797	Soil	MTQKPRNESARVVCLFCGTRTFVPASPARDIINQPDSGPGITIVRCHLCRKEAPYAASEIFLAQEVPLSDSNSRSRAAGL*
Ga0079221_100348531	3300006804	Agricultural Soil	MVGKLRNESGLVVVCLFCGTRTVVPASPARDTLNLPESGPGVALVRCHLCRKEAPYSASEMFPNPEVSLSDDNAQSRAAGI*
Ga0079220_107684632	3300006806	Agricultural Soil	MIEQQGSEDARVVVCLFCGTRTFVPSSPAREAADDSGPGIMLVRCHMCHKEAPYGASDILLSQETALPAGAL
Ga0150983_115551522	3300011120	Forest Soil	MTQQSRNENARVVCLFCGARTFVPAWATRDIVTQPESGPGIAIIRCHVCGKEAPYSTNEIFVNQEVPLHDNARSRAAGL*
Ga0150983_128776201	3300011120	Forest Soil	MTQQSRNENARVVCLFCGARTFVPASATRDTAHQQESGPGIALIRCHVCCKEAPYSTSEIFVPQEVSLDSNARSRAAGF*
Ga0150983_143357661	3300011120	Forest Soil	LSRPLLSSNSRREGRMVQKLRNESGRVVVCLFCGTHTFVPASPARDTVHLPDFGPGVTLVRCHVCGKEAPYSASEIFRNQDVSLADDNSRSRAAGL*
Ga0150983_157535642	3300011120	Forest Soil	MTQQSRNENARVVCLFCGARTFVPASATRDTAHQPESGPGIALIRCHVCRKEAPYSTSEIFVPQEVSLDSNARSRAAGF*
Ga0137393_113698782	3300011271	Vadose Zone Soil	MTQKPRNENARVVCLFCGTRTFVPSSQARDIANQPDSGAGITIIRCHVCRKEAPYSASEIFELQEASLPGDNSRSRAAGF*
Ga0137393_113842381	3300011271	Vadose Zone Soil	MVQKLRNESGRVVVCLFCGTRTFVPASSARDTFHLPDSGPGVTLVRCHVCGKEAPYSASEIFQNQDVALADGSARS
Ga0137383_102338512	3300012199	Vadose Zone Soil	GRMTQKPRNENARVVCLFCGTSTFVPASHSRDIANQPDSGAGITIIRCHVCRKEAPYSASEIFQLQEASLPGDNSRSRAAGF*
Ga0137380_114157341	3300012206	Vadose Zone Soil	MTQKPRNENARVVCLFCGTSTFVPASHSRDIANQPDSGAGITIIRCHVCRKEAPYSASEIFQLQEA
Ga0137384_101007481	3300012357	Vadose Zone Soil	MTQKPRNENARVVCLFCGTSTFVPASHSRDIANQPDSGAGITIIRCHVCRKEAPYSASEIFHLQEASLPGDNSRSRAAGF*
Ga0137416_107385511	3300012927	Vadose Zone Soil	MTQKPRNENARVVCLFCGTSTFVPASHSRDIANQPDSGAGITIIRCHVCRKEAPYSASEIFQLQEASLPGDSSRSRAAGF*
Ga0187824_100026473	3300017927	Freshwater Sediment	MTQQAITENARVVCLFCGARTFVPAHPARDILNQPESGSGISIVRCHVCRKEAPYAASEIFLTPEAALSDGNSRSRAAGL
Ga0187824_100338453	3300017927	Freshwater Sediment	MTQQSRNENARVVCLFCGARTFVPASATRDTAHQQESAPGIALIRCHVCRKEAPYSTSEIFVPQEVSLESNARSRAVGF
Ga0187821_100044985	3300017936	Freshwater Sediment	MTQQAITENARVVCLFCGARTFVPAHPARDILNQPESGSGIAIVRCHICRKEAPYAASEIFLTPEAALSDGNSRSRAAGL
Ga0187822_100426631	3300017994	Freshwater Sediment	NARVVCLFCGARTFVPAHPARDILNQPESGSGIAIVRCHICRKEAPYAASEIFLTPEAALSDGNSRSRAAGL
Ga0066662_101521071	3300018468	Grasslands Soil	MTQKPRNENARVICLFCGTRTFVPAFPARDIVNQPDSGPGVSLVRCHVCRKEAPYSASEIFLTQEVPLPDGNSRTRAAGL
Ga0210407_100461531	3300020579	Soil	MTQQSRNENARVVCLFCGARTFVPASATRDTAHQQESGPGIALIRCHVCCKEAPYSTSEIFVPQEVSLDSNARSRAAGF
Ga0210407_114370672	3300020579	Soil	MTQQSRNENARVVCLFCGARTFVPAWATRDIVTQPESGPGIAIIRCHVCGKEAPYSTSEIFVNQEVPLTNDN
Ga0210399_100280423	3300020581	Soil	MTQQSRNENARVVCLFCGARTFVPAWATRDIVTQPESGPGIAIIRCHVCGKEAPYSTSEIFVNQEVPLPNDNSRSRAAGL
Ga0210395_101194903	3300020582	Soil	MTQQSRNENARVVCLFCGARTFVPAWATRDIVTQPDSGSGIAIIRCHVCGKEAPYSTSEIFVNQEVPLHDNARSRAAGL
Ga0215015_104545865	3300021046	Soil	MTQKLRNESSRVVVCLFCGSRTFVPASPARDNAHLPDSGPGVTLVRCHICCKEAPYSASEIFLNQEVPRYEG
Ga0210404_108088612	3300021088	Soil	MTQQSRNENARVVCLFCGARTFVPAWATRDIVTQPDSASGIAIIRCHVCGKEAPYSTSEIFVNQEVP
Ga0210400_102729432	3300021170	Soil	MTQQSRNENARVVCLFCGARTFVPAWATRDIVTQPESGPGIAIIRCHVCGKEAPYSTSEIFVNQEVPLTNDNSRSRAAGL
Ga0210405_100513672	3300021171	Soil	MTQQPRNENARVVCLFCGTRTFVPASPARDAASLLESGPGIALIRCHLCRKEAPYSASDIFLAQEVPLSDENSRSRAAGL
Ga0210405_103555632	3300021171	Soil	MTQQSRNENARVVCLFCGARTFVPAWATRDIVTQPDSASGIAIIRCHVCGKEAPYSTSEIFVNQEVPLPNDNSRSRAAGL
Ga0210405_109363121	3300021171	Soil	MTQQSRNENARVVCLFCGARTFVPAWATRDIVTQPDSGSGIAIIRCHVCGKEAPYSTSEIFVNQEVPLTNDNSRSRAAGL
Ga0210405_110007911	3300021171	Soil	VCLFCGTHTFVPASPARDTVHLPDFGPGVTLVRCHVCGKEAPYSASEIFRNQDVSLADDNSRSRAAGL
Ga0210405_110112902	3300021171	Soil	MTQQSRNENARVVCLFCGARTFVPASATRDTAHQPESGPGIALIRCHVCCKEAPYSTSEIFVPQEVSLDSNARSRAAGL
Ga0210408_102331772	3300021178	Soil	MTQQSRNENARVVCLFCGARTFVPAWATRDIVTQPDSASGIAIIRCHVCGKEAPYSTSEIFVNQEVPLQGNSRTRAAGL
Ga0210385_104473092	3300021402	Soil	TQQSRNENARVVCLFCGARTFVPAWATRDIVTQPESGPGIAIIRCHVCGKEAPYSTSEIFVNQEVPLPNDNSRSRAAGL
Ga0210389_111488362	3300021404	Soil	ARVVCLFCGARTFVPASATRDTAHQQESGPGIALIRCHVCCKEAPYSTSEIFVPQEVSLDSNARSRAAGF
Ga0210394_100018984	3300021420	Soil	MTQQSRNENARVVCLFCGARTFVPASATRDTAHQPESGPGIALIRCHVCRKEAPYSTSEIFVPQEVSLDSNARSRAAGF
Ga0210394_100372895	3300021420	Soil	MYYRVPLSSNSCPAGLMTQQSRNENARVVCLFCGARTFVPAWATRDIVAQPESGPGIAIIRCHVCGKEAPYSTNEIFVNQEVPLQDNSRSRAAGL
Ga0210394_100427902	3300021420	Soil	MTQQSRNENARVVCLFCGARTFVPAWATRDIVTQPESGPGIAIIRCHVCGKEAPYSTNEIFVNQEVPLHDSNARSRAAGL
Ga0210394_106814712	3300021420	Soil	MAQKLRNESGRVVVCLFCGTRTFVPASAARDIVHMPDFGPGVTLIRCHSCGKEAPYSASEIFQNQDVSVTESNSRSRAAGL
Ga0187846_100171304	3300021476	Biofilm	MVQKLRNESHRVVVCLFCGTRTFVPASAARDTVSLPKSGPGVTLVRCHLCCKEAPYSASEIFLNPEVSLPGGNSRSRAAGI
Ga0210410_108431101	3300021479	Soil	MTQQSRNENARVVCLFCGARTFVPAWATRDIVTQPESGPGIAIIRCHVCGKEAPYSTNEIFVNQEVPLQDNSRSRAAGL
Ga0210409_104368542	3300021559	Soil	MVQKLRNESGRVVVCLFCGTHTFVPASPARDTVHLPDFGPGVTLVRCHVCGKEAPYSASEIFRNQDVSLADDNSRSRAAGL
Ga0210409_114232192	3300021559	Soil	FCGTRTFVPASPARDAASLLESGPGIALIRCHLCRKEAPYSASDIFLAQEVPLSDENSRSRAAGL
Ga0242642_10890381	3300022504	Soil	CREGRMTQQSRNENARVVCLFCGARTFVPASATRDTAHQQESGPGIALIRCHVCCKEAPYSTSEIFVPQEVSLDSNARSRAAGF
Ga0242665_100953241	3300022724	Soil	MTQQPRNENARVVCLFCGTRTFVPASPARDAASLLESGPGIALIRCHLCRKEAPYSASDIFLAQEVPLSDDNSRSRAAGL
Ga0209236_10234152	3300026298	Grasslands Soil	MTQKPRNENARVVCLFCGTSTFVPSSQARYSASQSDSGAGITLIRCHVCCKEAPYSASEIFQLQEVSLPEGDSRSRAAGI
Ga0209154_11128491	3300026317	Soil	MTQKPINENARVVCLFCGTRTFVPAFPAREIINQPDSGPGITIVRCHLCRKEAPYAASEIFLAQEVPLSDSNSRSRAAGL
Ga0209471_12864561	3300026318	Soil	MTQKPINENARVVCLFCGTRTFVPASPARDIINQPDSGPGITIVRCHLCRKEAPYAASEIFLAQEVPLSDSNSRSRAAGL
Ga0209377_10108856	3300026334	Soil	MTQKPRNENARVVCLFCGTSTFVPASPVRDLANQPDYGPGISIVRCHVCRKEAPYSASEVFQLQDASLPEGDSRSRAAGI
Ga0209804_10052358	3300026335	Soil	MTQKPINENARVVCLFCGTRTFVPAFPAREIINQPDSGPGITIVRCHLCRKEAPYAASEIFLAQEVPLSDSNSRSRAAGH
Ga0209806_11831641	3300026529	Soil	MTQKPRNENARVVCLFCGTSTFVPASPVRDLANQPDYGPGVSIFRCHVCRKEAPYSASEVFQLQDASLPEGDSRSRAAGI
Ga0209648_100496653	3300026551	Grasslands Soil	MVQKLRNESGRVVVCLFCGTRTFVPASSARDTFHLPDSGPGVTLVRCHVCGKEAPYSASEIFQNQDVALADGDARSRAAGL
Ga0209219_10573481	3300027565	Forest Soil	MTQQSRNENARVVCLFCGARTFVPASATRDTAHQPESGPGIALIRCHVCCKEAPYSTSEIFVPQEVSLHDSNARSRAAGF
Ga0209625_10232532	3300027635	Forest Soil	MTQQSRNENARVVCLFCGARTFVPAWATRDIVTQPDSASGIAIIRCHVCGKEAPYSTSEIFVNQEVPLTNDNSRSRAAGL
Ga0209689_13763141	3300027748	Soil	MTQKPRNENARVVCLFCGTSTFVPASHSRDIANQPDSGAGITIIRCHVCRKEAPYSASEIFQLQEASLPGDNSRSRAAGF
Ga0209810_10763223	3300027773	Surface Soil	MTQKRRNENARVVCLFCGTPTFVPQFPSLDTHDEGDLGAGITLVRCHICRKEAPYAASEIFSIQEIPPSEDSTRTRAAGL
Ga0209167_102562731	3300027867	Surface Soil	MTQQSRNENARVVCLFCGARTFVPASATRDTANQPESGSGIALIRCHVCRKEAPYSTSEMFVPQEVSLDSSARSRAAGL
Ga0209167_102646981	3300027867	Surface Soil	MTQQSRNENARVVCLFCGARTFVPVSATRDMLNELDSGPSISIIRCHVCCKEAPYSASEIFLTQEVPLSEANSRSRAAGL
Ga0209380_102094022	3300027889	Soil	MAQKLRNESGRVVVCLFCGTRTFVPASAARDIVHMPDFGPGVTLIRCHSCGKEAPYSASEIFQNQDVSVTENNARSRAAGL
Ga0209698_111698381	3300027911	Watersheds	MTQQSRNENARVVCLFCGARTFVPAWATRDIVTQPESGPGIAIIRCHVCGKEAPYSTSEIFVNQEVPLHDNARSRAAGL
Ga0209168_106506951	3300027986	Surface Soil	MTQQSRNENARVVCLFCGTSTFVPASLARYSASEPDSGTGITLVRCHVCRKEAPYSASEIFLLPEVPLADGNPRSRVVGL
Ga0209526_101933882	3300028047	Forest Soil	MTQQSRNENARIVCLFCGTSTFVPASLARYSASDPDSGTGITLVRCHVCRKEAPYSASEIFLIPEVPLADGNSRSRSVGL
Ga0209526_103075382	3300028047	Forest Soil	MTQQSRNENARVVCLFCGARTFVPASATRDTAHQPESGPGIALIRCHVCCKEAPYSTSEIFVPQEVSLHDSSARSRAAGL
Ga0308309_112379772	3300028906	Soil	MTQQSRNENARVVCLFCGARTFVPASATRDTAHQPESGPGIALIRCHVCCKEAPYSTSEIFVPQEVSLHDSNARSRAAGL
Ga0308309_118235642	3300028906	Soil	MAQKLRNESGRVVVCLFCGTRTFVPASAARDIVHMPDFGPGVTLIRCHSCGKEAPYSASEIFQNQDVSVTENNARSR
Ga0073994_120948052	3300030991	Soil	MTQQSRNENARVVCLFCGARTFVPASATRDTAHQPESGPGIALIRCHVCCKEAPYSTSEIFVPQELSLDSNARSRAAGL
Ga0307474_108942281	3300031718	Hardwood Forest Soil	MAQKLRNESGRVVVCLFCGTRTFVPASAARDIVHMPDFGPGVTLIRCHSCGKEAPYSASEIFQNQDVSVTESNARSRAAGL
Ga0307477_101829603	3300031753	Hardwood Forest Soil	MTQQSRNENARVVCLFCGARTFVPAWATRDIVTQPESGPGIAIIRCHVCSKEAPYSTSEIFVNQEVPLQDNSRSRAVGL
Ga0307475_100042395	3300031754	Hardwood Forest Soil	MYYHFPLSSNSCPEGLMTQQSRNENARVVCLFCGARTFVPAWATRDIVTQPESGPGIAIIRCHVCSKEAPYSTSEIFVNQEVPLQDNSRSRAVGL
Ga0307475_102134362	3300031754	Hardwood Forest Soil	MTQQSRNENARVVCLFCGARTFVPAWATRDIVTQPDSASGIAIIRCHVCGKEAPYSTSEIFVNQEVPLTNDNSRTRAAGL
Ga0307478_106407422	3300031823	Hardwood Forest Soil	MTQQSRNENARVVCLFCGARTFVPAWATRDIVTQPESGPGIAIIRCHVCGKEAPYSTNEIFVNQEVPLHDNARSRAAGL
Ga0307478_113941511	3300031823	Hardwood Forest Soil	MTQQFRNENARVVCLFCGARTFVPAWATRDIVTQPDSASGIAIIRCHVCGKEAPYSTSEIFVNQEVPLTNDNSRTRAAGL
Ga0307478_115762821	3300031823	Hardwood Forest Soil	RMTQQPRNENARVVCLFCGTRTFVPASPARDAASLLESGPGIALIRCHLCRKEAPYSASDIFLAQEVPLSDENSRSRAAGL
Ga0307479_100268205	3300031962	Hardwood Forest Soil	MTQQFRNENARVVCLFCGARTFVPAWATRDIVTQPDSASGIAIIRCHVCGKEAPYSTSEIFVNQEVPLQGNSRTRAAGL
Ga0307471_1000126425	3300032180	Hardwood Forest Soil	MVQKLRNESGRVVVCLFCGTRTFVPASPARDTVNLPESGTGVTLVRCHVCCKEAPYSASEIFRNPEVSRPDDNSRSRAAGL
Ga0307471_1005176163	3300032180	Hardwood Forest Soil	EGLMTQQSRNENARVVCLFCGARTFVPASATRDTANQSESGPGIALIRCHVCCKEAPYSTSEIFVNQEVPPHNDNSRSRAAGL
Ga0307471_1013541382	3300032180	Hardwood Forest Soil	MTQKPRNENARVICLFCGTRTFVPAFPARDIVNQPDSGPGVSLVRCHVCRKEAPYSASEIFLTQEVPLPEGNSRSRAAGL
Ga0307471_1018164652	3300032180	Hardwood Forest Soil	MTQQSRNENARVVCLFCGTSTFVPASLARYSASDPGSGTGITLVRCHVCCKEAPYSASEIFLLSEVPMA
Ga0307471_1033404121	3300032180	Hardwood Forest Soil	EGRMTQQSRNENARVVCLFCGSRTFVPASATRDTAHQQESAPGIALIRCHVCRKEAPYSTSEIFVPQEVSLDSNARSRAAGF
Ga0335079_110869321	3300032783	Soil	MAQKSKNENGRAVVCLFCGTRTFVPASPSREAAAEADSSGGISIVRCHVCHKEAPYAASEMT
Ga0335081_100119331	3300032892	Soil	MAQKSKNENGRAVVCLFCGTRTFVPASPSREAAAEADSSGGISIVRCHVCHKEAPYAASEMTPG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097748

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences