Metagenome / Metatranscriptome Family F097713

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097713
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	64 residues
Representative Sequence	ISYTVPATSPAAPASIAPARLTNYVFAHSRYSSGLAQRGVMADLLIEADEQQPAVNEAAAHVAP
Number of Associated Samples	91
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.94 %
% of genes near scaffold ends (potentially truncated)	95.19 %
% of genes from short scaffolds (< 2000 bps)	92.31 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.923 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.077 % of family members)
Environment Ontology (ENVO)	Unclassified (38.462 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.615 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.74% β-sheet: 0.00% Coil/Unstructured: 53.26%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF03888	MucB_RseB	73.08
PF17188	MucB_RseB_C	15.38
PF00009	GTP_EFTU	2.88
PF05768	Glrx-like	1.92
PF07650	KH_2	1.92
PF00497	SBP_bac_3	0.96
PF01527	HTH_Tnp_1	0.96
PF00383	dCMP_cyt_deam_1	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG3026	RseB, negative regulator of sigma E activity	Signal transduction mechanisms [T]	73.08
COG0695	Glutaredoxin	Posttranslational modification, protein turnover, chaperones [O]	1.92
COG3118	Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family	Posttranslational modification, protein turnover, chaperones [O]	1.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.92 %
Unclassified	root	N/A	48.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.92 %
Unclassified	root	N/A	48.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.92 %
Unclassified	root	N/A	48.08 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	49.04 %
Unclassified	root	N/A	48.08 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.08 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	44.23 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.08 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	40.38 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.08 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	40.38 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.08 %
unclassified Steroidobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae	36.54 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	3.85 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.08 %
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	36.54 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	3.85 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001471\|JGI12712J15308_10079583	Not Available	830	Open in IMG/M
3300001471\|JGI12712J15308_10158868	Not Available	586	Open in IMG/M
3300001546\|JGI12659J15293_10048848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	974	Open in IMG/M
3300001661\|JGI12053J15887_10331343	Not Available	739	Open in IMG/M
3300002245\|JGIcombinedJ26739_100601388	Not Available	977	Open in IMG/M
3300002245\|JGIcombinedJ26739_100761998	Not Available	847	Open in IMG/M
3300002245\|JGIcombinedJ26739_101466455	All Organisms → cellular organisms → Bacteria → Proteobacteria	577	Open in IMG/M
3300004082\|Ga0062384_101211559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	549	Open in IMG/M
3300004092\|Ga0062389_100561707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1299	Open in IMG/M
3300004092\|Ga0062389_100715481	Not Available	1176	Open in IMG/M
3300004631\|Ga0058899_11739753	Not Available	808	Open in IMG/M
3300005944\|Ga0066788_10095845	Not Available	732	Open in IMG/M
3300006041\|Ga0075023_100349816	Not Available	624	Open in IMG/M
3300006176\|Ga0070765_100682621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	970	Open in IMG/M
3300006604\|Ga0074060_11840234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	513	Open in IMG/M
3300006953\|Ga0074063_10058424	Not Available	640	Open in IMG/M
3300010859\|Ga0126352_1167254	Not Available	561	Open in IMG/M
3300010860\|Ga0126351_1106799	Not Available	1245	Open in IMG/M
3300010865\|Ga0126346_1088471	Not Available	768	Open in IMG/M
3300012363\|Ga0137390_11319665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	667	Open in IMG/M
3300012927\|Ga0137416_10608996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	952	Open in IMG/M
3300012930\|Ga0137407_11815844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	581	Open in IMG/M
3300014168\|Ga0181534_10271242	All Organisms → cellular organisms → Bacteria → Proteobacteria	906	Open in IMG/M
3300014501\|Ga0182024_12602035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	543	Open in IMG/M
3300014657\|Ga0181522_10529888	Not Available	711	Open in IMG/M
3300014658\|Ga0181519_10248044	Not Available	1112	Open in IMG/M
3300015167\|Ga0167661_1017524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1305	Open in IMG/M
3300015193\|Ga0167668_1045538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	931	Open in IMG/M
3300019268\|Ga0181514_1045816	Not Available	565	Open in IMG/M
3300019880\|Ga0193712_1040583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1010	Open in IMG/M
3300020579\|Ga0210407_10586108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	870	Open in IMG/M
3300021151\|Ga0179584_1107388	Not Available	1006	Open in IMG/M
3300021168\|Ga0210406_10342229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1208	Open in IMG/M
3300021170\|Ga0210400_10474050	Not Available	1033	Open in IMG/M
3300021401\|Ga0210393_10110106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2197	Open in IMG/M
3300021403\|Ga0210397_11194362	Not Available	591	Open in IMG/M
3300021433\|Ga0210391_10008634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	8272	Open in IMG/M
3300021433\|Ga0210391_10792522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	741	Open in IMG/M
3300021475\|Ga0210392_10419383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	978	Open in IMG/M
3300021479\|Ga0210410_10274235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1514	Open in IMG/M
3300021559\|Ga0210409_10853766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	784	Open in IMG/M
3300022504\|Ga0242642_1097967	Not Available	510	Open in IMG/M
3300023046\|Ga0233356_1023622	Not Available	725	Open in IMG/M
3300024222\|Ga0247691_1076707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	505	Open in IMG/M
3300024287\|Ga0247690_1044014	Not Available	528	Open in IMG/M
3300026281\|Ga0209863_10242582	Not Available	517	Open in IMG/M
3300026515\|Ga0257158_1092438	Not Available	593	Open in IMG/M
3300026557\|Ga0179587_10880432	Not Available	590	Open in IMG/M
3300026557\|Ga0179587_11083462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	527	Open in IMG/M
3300027591\|Ga0209733_1122662	Not Available	645	Open in IMG/M
3300027629\|Ga0209422_1002594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	4369	Open in IMG/M
3300027629\|Ga0209422_1027309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1410	Open in IMG/M
3300027633\|Ga0208988_1145364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	572	Open in IMG/M
3300027651\|Ga0209217_1160055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	620	Open in IMG/M
3300027652\|Ga0209007_1007594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2900	Open in IMG/M
3300027680\|Ga0207826_1185508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	563	Open in IMG/M
3300027681\|Ga0208991_1039021	All Organisms → cellular organisms → Bacteria	1435	Open in IMG/M
3300027703\|Ga0207862_1213116	Not Available	571	Open in IMG/M
3300027795\|Ga0209139_10306855	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300027857\|Ga0209166_10713823	Not Available	504	Open in IMG/M
3300027860\|Ga0209611_10018329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	8612	Open in IMG/M
3300027862\|Ga0209701_10227817	Not Available	1099	Open in IMG/M
3300027867\|Ga0209167_10100823	All Organisms → cellular organisms → Bacteria → Proteobacteria	1477	Open in IMG/M
3300027879\|Ga0209169_10287837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	863	Open in IMG/M
3300027884\|Ga0209275_10820096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	536	Open in IMG/M
3300027894\|Ga0209068_10880604	Not Available	529	Open in IMG/M
3300027908\|Ga0209006_10168618	All Organisms → cellular organisms → Bacteria → Proteobacteria	1914	Open in IMG/M
3300027908\|Ga0209006_11147943	Not Available	610	Open in IMG/M
3300027908\|Ga0209006_11181184	Not Available	599	Open in IMG/M
3300028012\|Ga0265346_101077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	861	Open in IMG/M
3300028047\|Ga0209526_10482031	Not Available	811	Open in IMG/M
3300028773\|Ga0302234_10081436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1434	Open in IMG/M
3300028800\|Ga0265338_10427787	Not Available	940	Open in IMG/M
3300029701\|Ga0222748_1058630	Not Available	676	Open in IMG/M
3300029883\|Ga0311327_10527380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	720	Open in IMG/M
3300029922\|Ga0311363_10245793	All Organisms → cellular organisms → Bacteria → Proteobacteria	2088	Open in IMG/M
3300029951\|Ga0311371_11905787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	636	Open in IMG/M
3300030020\|Ga0311344_10643115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	899	Open in IMG/M
3300030529\|Ga0210284_1194513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	500	Open in IMG/M
3300030738\|Ga0265462_12145314	Not Available	548	Open in IMG/M
3300030743\|Ga0265461_11874368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	676	Open in IMG/M
3300030760\|Ga0265762_1169811	Not Available	531	Open in IMG/M
3300030874\|Ga0265742_1009965	Not Available	718	Open in IMG/M
3300030997\|Ga0073997_12210515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	922	Open in IMG/M
3300031023\|Ga0073998_11502197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	613	Open in IMG/M
3300031047\|Ga0073995_10023437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1018	Open in IMG/M
3300031047\|Ga0073995_10052272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1421	Open in IMG/M
3300031057\|Ga0170834_102090564	Not Available	1218	Open in IMG/M
3300031057\|Ga0170834_104834369	Not Available	602	Open in IMG/M
3300031090\|Ga0265760_10076316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1034	Open in IMG/M
3300031128\|Ga0170823_10198930	Not Available	525	Open in IMG/M
3300031231\|Ga0170824_117565330	Not Available	871	Open in IMG/M
3300031231\|Ga0170824_127498623	Not Available	504	Open in IMG/M
3300031247\|Ga0265340_10194158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	915	Open in IMG/M
3300031708\|Ga0310686_104787128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	936	Open in IMG/M
3300031708\|Ga0310686_113478421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	802	Open in IMG/M
3300031715\|Ga0307476_10174786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1551	Open in IMG/M
3300031912\|Ga0306921_11359749	Not Available	783	Open in IMG/M
3300032515\|Ga0348332_11488654	Not Available	537	Open in IMG/M
3300033180\|Ga0307510_10474224	Not Available	693	Open in IMG/M
3300033402\|Ga0326728_10940941	Not Available	607	Open in IMG/M
3300034124\|Ga0370483_0264917	Not Available	590	Open in IMG/M
3300034163\|Ga0370515_0029836	Not Available	2471	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.15%
Host-Associated	Host-Associated	3.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.54%
Aquatic	Environmental → Aquatic	9.62%
Plants	Host-Associated → Plants	3.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.85%
Freshwater	Environmental → Aquatic → Freshwater	7.69%
Peat	Environmental → Terrestrial → Peat	5.77%
Sediment	Environmental → Aquatic → Sediment	1.92%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.92%
Roots	Host-Associated → Plants → Roots	0.96%
Peat Moss	Host-Associated → Plants → Peat Moss	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.96%
Loam	Environmental → Terrestrial → Soil → Loam	23.08%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.92%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.92%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	23.08%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.15%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.92%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	18.27%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.81%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.88%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.88%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.88%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.92%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.92%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.92%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.96%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.96%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.96%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.96%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.96%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.96%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.96%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010859	Boreal forest soil eukaryotic communities from Alaska, USA - C5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010860	Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300015167	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11b, vegetated hydrological feature)	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300019268	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019880	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021151	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023046	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300024287	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK31	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027860	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)	Host-Associated	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028012	Plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE4	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030529	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO740-VDE013SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030874	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030997	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031023	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFA (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031047	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300033180	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM	Host-Associated	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12712J15308_100795831	3300001471	Forest Soil	VSLAPGRLTNYVFAHSQYSSGLAQRGVMADMLIESDQQQPAIEEAAAHVAP*
JGI12712J15308_101588682	3300001471	Forest Soil	SAALAQNGAVPAAPREAISYTVPAVSGAAPPAGLAPGRLTNYVFAHSQYSSGLAQRGVMADMLIESDQQQPAIEEAAAHVAP*
JGI12659J15293_100488481	3300001546	Forest Soil	PASPVGMPQARLTNYVLAHSRYSSGLDLRGVLADLLIEADEPQPAVNQAAAHVAP*
JGI12053J15887_103313432	3300001661	Forest Soil	SPAAPAAIPPARLTNYVFAHSRYSSGLTLRGVMADLLIEADEQQPAVNEAAAHVAP*
JGIcombinedJ26739_1006013882	3300002245	Forest Soil	PATTPAAPSAMPRGRLTNYVFAHSRYSSGLDLRGVMADLLIESDEPQQPAVNEAAAHVPP
JGIcombinedJ26739_1007619981	3300002245	Forest Soil	GPAGLPQTPREAMSYTVPPTSPASPVGMPXARLTNYVLAHSRYSSGLDLRGVLADLLIEADEPQPAVNQAAAHVAP*
JGIcombinedJ26739_1014664552	3300002245	Forest Soil	REAISYTVPAVSAAAPPAGLAPGRLTNYVFAHSKYSSGLAQRGVMADMLIESDQQQPAIEEAAAHVAP*
Ga0062384_1012115591	3300004082	Bog Forest Soil	GVQTPHEPISYTVPQASGAPAAMLPARLTNYVFAHSRYSSGLDQRGVLADMLIEEQQPAVDEAAVRVAP*
Ga0062389_1005617071	3300004092	Bog Forest Soil	PATKEPISYTVPVTSPAGPASIAPARLTNYMFAHSKYSSGLALRGVLADLLIEGDDQPPAVDAAAAHVAP*
Ga0062389_1007154811	3300004092	Bog Forest Soil	PAAMAPARLTNYVFAHSKYSSGLGRRGVLADLLIEDDEPAPAAPDARAAQ*
Ga0058899_117397531	3300004631	Forest Soil	ARLTNYVFAHSKYSSGLAQRGVMADLLIESDEQQSPAVNEAAAHAAP*
Ga0066788_100958451	3300005944	Soil	SYTVPAPSDAPAAMAPARLTNYVLAHSRYSSGLDQRGVVADMLIEADEQPVLN*
Ga0075023_1003498162	3300006041	Watersheds	SYTVPATSPAAPAAMPPARLAGYVFAHSRYSSGLDQRGMLADLLIEADEQPVVNEAAAHVAP*
Ga0070765_1006826212	3300006176	Soil	PAAPREAISYTVPAASGAVPPVGLAPGRLTNYVFAHSKYSSGLAQRGVMADMLIESDQQQPAIEEAAAHVAP*
Ga0074060_118402342	3300006604	Soil	APKTSEPISYTVPAVSPTVPSGMPPGRLTNYVLAHSRYSSGLDQRGVLADLLIEADEQAPTVNQAAAHVQAAPVAP*
Ga0074063_100584242	3300006953	Soil	VSPTVPSGMPPGRLTNYVLAHSRYSSGLDQRGVLADLLIEADEQAPAVNQAAAHVVP*
Ga0126352_11672542	3300010859	Boreal Forest Soil	YTVPAASPLASAAMGPGRLTNYVFAHSRYSSGLAQRGVLADLLIEGDEPPPAIEQAAAHVAP*
Ga0126351_11067991	3300010860	Boreal Forest Soil	PATSPAAAASVGPGRLTNYVFAHSRYSSGLAQRGVLADLLIEGDEPPPALEQAAAHVAP*
Ga0126346_10884711	3300010865	Boreal Forest Soil	REAISYTVPAASGAAPPVGLAPGRLTNYVFAHSRYSSGLAQRGMMADMLIESDQQQPAIEEAAARVAP*
Ga0137390_113196651	3300012363	Vadose Zone Soil	TAAQTAAPAPVSREAISYTVPATSPAAPAAMPRARLTNYVFAHSKYSSGLDLRGVLADLLIESDEQQPAVNEAAAHVAP*
Ga0137416_106089962	3300012927	Vadose Zone Soil	SREAISYTVPATSAAAPAAMPAARLTNYVFAHSRYSSGLAQRGVMADLLIEADDQQPAVSEAAAHVAP*
Ga0137407_118158441	3300012930	Vadose Zone Soil	VPTTSPAAPAAMPPARLTNYVFAHSRYSSGLDLRGVVADLLIEAEEQQPAANEAAAHVAP
Ga0181534_102712422	3300014168	Bog	MPPARLTNYVFAHSRYSSGLDQRGVVADMLIEGDDGPAAADAAAAHVAP*
Ga0182024_126020352	3300014501	Permafrost	EAISYTVPATLPAAPAAMPPARLTNYVFAHSRYSSGLDQRGVLADMLIEADEQQPQINEAAAHVAP*
Ga0181522_105298881	3300014657	Bog	VPAAAPAAAAMAPARLTNYVFEHSKYSSSLEQRGMLADMLIEADEQQPQVNEAAAHAAP*
Ga0181519_102480442	3300014658	Bog	SYTVPVASSTAVMAVAPARLTNYVFAHSQYSSGLDQRGVMADLLIEADQQQPAIEEAAAHPVP*
Ga0167661_10175242	3300015167	Glacier Forefield Soil	TLVQPPREAISYTVPAASPVAPAAMPPARLTNYVFAHSRYSSGLDQRGVLADMLIETDEQAPKVEQPAARVAP*
Ga0167668_10455381	3300015193	Glacier Forefield Soil	PREAISYTVPAAPPAAAAMAPARLTNYVLAHSRYSSGLAQRGVLADLLIEADEQQHPAVTEAAAHVAP*
Ga0181514_10458162	3300019268	Peatland	PTSAAVPAVMARTRLTNYVFAHSRYSSGLDQRGLLADMLIEAEEQQPTVDETAAHAAP
Ga0193712_10405831	3300019880	Soil	PAAPPTATAALGPARLTNYVLAHSRYSSVLGQRGVLTDLLIEGDEQPPAAQEAAAHVAP
Ga0210407_105861082	3300020579	Soil	AQNAAPAQNAVPGAVQGPREAISYTVPATLPAPPAAKAPGRLTNYVFAHSKYSTGLAQRGVLADLLIEADEQQPVVTEAAARVDP
Ga0210399_114664681	3300020581	Soil	RAVAPALRSAVPLTAHTSVPAPASREAISYTVPATLPAAPAAMPPARLTNYVFAHSRYSSGLAQRGVMADLLIEADDQQPAVNEAAHVAP
Ga0179584_11073881	3300021151	Vadose Zone Soil	TSPAAPAAMPQARLTNYVFAHTRYSSGLALRGVMTDLLIEAEEQQPATSEAAHVAP
Ga0210406_103422292	3300021168	Soil	PTAAVAESGAVPASREAISYTVPTTSPAAPAAMPPARLTNYVFAHSRYSSGLDLRGVMADLLIEAEEQQPAANEAAAHVAR
Ga0210400_104740502	3300021170	Soil	SAIPPARLTNYVFAHSRYSSGLALRGVMADLLIESDEPQQPAVNEAAAHAPP
Ga0210393_101101064	3300021401	Soil	SAMPQARLTNYVLAHSRYSSGLDLRGVLADLLIEADEPQPTVNQAAAHVAP
Ga0210397_111943622	3300021403	Soil	EPVTARNLVPAPKTSEPISYTVPTVSPTVPSGMPPARLTNYVLAHSRYSSGLDQRGVLADLLIEADEPAPAVNQAAAHVQAAPVAP
Ga0210391_100086341	3300021433	Soil	TSPASPVGMPQARLTNYVLAHSRYSSGLDLRGVLADLLIEADEPQPAVNQAAAHVAP
Ga0210391_107925221	3300021433	Soil	VPPTSGGAPAAMPPARLTNYVFAHSKYSSGLEQRGVLADLLIEAEEQQPPDHAAAAPVAP
Ga0210392_104193831	3300021475	Soil	PREPISYTVVPVTSPDAPAAMPPARLTNYVFAHSKYSSGLAQRGVLADLLIEADEQQPAANEAAAHVAP
Ga0210410_102742351	3300021479	Soil	SAVPLTAHTSVPAPASREAISYTVPATLPAAPAAMPPARLTNYVFAHSRYSSGLAQRGVMADLLIEADDQQPAVNEAAHVAP
Ga0210409_108537661	3300021559	Soil	QTAVPAQSAPRTVSGAVPAPREAISYTVPATSPAAPAAMFPARLTNYVFAHSKYSSGLAQRGVMADLLIESDEPPAVNEAAAHVAP
Ga0242642_10979671	3300022504	Soil	PAAMPPARLTNYVFAHSRYSSGLAQRGVMADLLIEADDQQPAVNEAAHVAP
Ga0233356_10236222	3300023046	Soil	PIPPARLTNYVFAHSRYSSGLDLRGVMADLLIEADDQPPPANEEAATHAAP
Ga0247691_10767071	3300024222	Soil	VAAPKTSEPISYTVPAVSPTVPSGMPPGRLTNYVLAHSRYSSGLDQRGVLADLLIEADEQAPAVNQAAAHVVP
Ga0247690_10440142	3300024287	Soil	TSEPISYTVPAVSPTVPSGMPPGRLTNYVLAHSRYSSGLDQRGVLADLLIEADEQAPAVNQAAAHVVP
Ga0209863_102425821	3300026281	Prmafrost Soil	QQRAIAPTLRPVKGAITAQNLVPVAPKTSEPISYTVPAASPAEPTGMPPARLTNYVLAHSRYSSGLDQRGVLADLLIEADEQAPAVNKAAAHVQATHVAP
Ga0257158_10924381	3300026515	Soil	FPARLTNYVFAHSKYSSGLAQRGVMADLLIESDEPPAVNEAAARVAP
Ga0179587_108804321	3300026557	Vadose Zone Soil	SPVVAPAAIMPARLTSYVFAHSKYSSGLDLRGVMADLLIEDQQPAVNEAAAHVAP
Ga0179587_110834622	3300026557	Vadose Zone Soil	PREAISYTVPTTSPAAPAAMPPARLTNYVFAHSRYSSGLDLRGVIADLLIEAEEQQPAANEAAAHVAP
Ga0209733_11226622	3300027591	Forest Soil	ASTLAAQNAVPVRSAAPREAISYTVPATSPAAAASVGPGRLTNYVFAHSRYSSGLAQRGVLADLLIEGDEPPPAIEQAAAHVAP
Ga0209422_10025945	3300027629	Forest Soil	LRSAAPREAISYTVPAASPLASAAMGPGRLTNYVFAHSRYSSGLAQRGVLADLLIEGDEPPPAIEQAAAHVAP
Ga0209422_10273091	3300027629	Forest Soil	PAAPAAMPPARLTNYVFAHSRYSSGLAQRGVMADLLIEADEQQPAVNEAAAHAAP
Ga0208988_11453642	3300027633	Forest Soil	ISYTVPATSPAAPASIAPARLTNYVFAHSRYSSGLAQRGVMADLLIEADEQQPAVNEAAAHVAP
Ga0209217_11600551	3300027651	Forest Soil	PATSPAAPASIAPARLTNYVFAHSRYSSGLAQRGVMADLLIEADEQQPAVNEAAAHVVP
Ga0209007_10075946	3300027652	Forest Soil	SYTVPPTSPASPVGMPQARLTNYVLAHSRYSSGLDLRGVLADLLIEADEPQPAVNQAAAHVAP
Ga0207826_11855081	3300027680	Tropical Forest Soil	EPISYTVPASSPEPAAAIAPARLTNYVFAHSKYSSGLAQRGVLADLLIEDDGLQMPPPVTQPASPDVHDAP
Ga0208991_10390213	3300027681	Forest Soil	MPPARLTNYMFAHSKYSSGLAQRGVMTDLLIEADEQHPTVTEASAQVAP
Ga0207862_12131162	3300027703	Tropical Forest Soil	PASSSEPAAIAPARLTNYVFAHSKYSSGLAQRGVLADLLIEDDELQMPPPVTQPASPDVHDAP
Ga0209139_103068552	3300027795	Bog Forest Soil	MYFAQASGAAAAMLPARLTNYVFAHSRYSSGLDQRGVLADMLIEEQQPAVDEAAVRVAP
Ga0209166_107138232	3300027857	Surface Soil	REAISYTVPAAPRAAPAAMPPARLANYVFAHSKYSSGLAQRGVMADLLIEADDQQPAANEAAAHVAP
Ga0209611_1001832911	3300027860	Host-Associated	REPISYTVPETSSAPPKVLPAGRLTNYVFAHSRYSSGLDQRGVLADMLIEAEDQPQPAAAPTAP
Ga0209701_102278171	3300027862	Vadose Zone Soil	PRARLTNYVFAHSRYSSGLDLRGVLADLLIEADEQQPAVNEAAAHAAP
Ga0209167_101008233	3300027867	Surface Soil	REPDSYTVPPTSPIAPVGVPQARLTNYVLAHSRYSSGLDLRGVLADLLIEADEPQPTVNQAAAHVAP
Ga0209169_102878372	3300027879	Soil	SPAAPAAIPQARLTNYVFAHSRYSSGLDQRGVLADLLIEAEEQQPASHEAPAPVVP
Ga0209275_108200961	3300027884	Soil	QGAVPVPAPREPISYTVPATSPEATVAVAPARLTNYVFAHSKYSSGLAQRGVLADLLIEADEQQPVVTEAAAHSAP
Ga0209068_108806041	3300027894	Watersheds	SYTVPPSAAMAPTRLTNYMLAHSRYSSGLAQRGVLADLLIEADEQQQPQVTEAAAHVAP
Ga0209006_101686181	3300027908	Forest Soil	QTPREAISYTVPPVSPAAPAAIPQARLTNYVFAHSRYSSGLDQRGVLADLLIEAEEQQPASHEAPASVVP
Ga0209006_111479432	3300027908	Forest Soil	GAAPSVSLAPGRLTNYVFAHSQYSSGLAQRGVMADMLIESDQQQPAIEEAAAHVAP
Ga0209006_111811841	3300027908	Forest Soil	AVPVRSAAPREAISYTVPATSPAAAASVGAGRLTNYVFAHSRYSSGLAQRGVLADLLIEGDEPPPALEQAAAHVAP
Ga0265346_1010771	3300028012	Plant Litter	TVPTVSGAAFAVMPPARLTNYVFAHSRYSSGLDQRGVLADLLIESEEARPAVNEAAHVAP
Ga0209526_104820311	3300028047	Forest Soil	AQNAVPVRSAAPREAISYTVPATSPAAAASVGAGRLTNYVFAHSRYSSGLAQRGVLADLLIEGDEPPPALEQAAAHVAP
Ga0302234_100814361	3300028773	Palsa	IPQARLTNYVFAHSRYSSGLDQRGVLADLLIDAEEQQPASHEAQAPVVP
Ga0265338_104277872	3300028800	Rhizosphere	AAAAVMPPARLTKYVFAHSRYSSGLDQRGVMADLLIEADEPPPQVSEAAAHVAP
Ga0222748_10586301	3300029701	Soil	QVQSAALAQNGAVPAAPREAISYTVPAASGAVPPVGLAPGRLTNYVFAHSKYSSGLAQRGVMADMLIESDQQQPAIEEAAAHVAP
Ga0311327_105273801	3300029883	Bog	EAISYTVPAAFTGVPAAMPPARLTNYVFAHSRYSSGLDQRGVLADLLIENEEAHPAVSEAAAHVAP
Ga0311363_102457931	3300029922	Fen	PAAMPPARLTNYVFAHSRYSSGLDQRGVLADLLIENEEAHPAVSEAAAHVAP
Ga0311371_119057872	3300029951	Palsa	TQEPISYTVVPASSPAAPSLVPQARLTNYVFAHSKYSSGLDQRGVLADLLIEGDEQPPVVNEAAAHVAP
Ga0311344_106431151	3300030020	Bog	FTGVPAAMPPARLTNYVFAHSRYSSGLDQRGVLADLLIENEEAHPAVSEAAAHVAP
Ga0210284_11945132	3300030529	Soil	VVAQGPAGLQQTPREPDSYTVPPTSPATPSGMPQARLTNYVLAHSRYSSGLDLRGVLADLLIEADEPQPTVNQAAAHVAP
Ga0265462_121453141	3300030738	Soil	HLVPAPAGGDTYVVPPPSSASSSVMLPARLTDYVFAHSKYSSGLYQRGVLADLLIESDEQQAAVDEAAARVAR
Ga0265461_118743681	3300030743	Soil	TVPPTSPEAPVAVPARLTNYVFAHSKYSSGLAQRGVLADLLIEADEQQPVVTEAAAHSAP
Ga0265762_11698111	3300030760	Soil	PQTPREPLSYTVPTMSPAASVGVPQARLTNYVLAHSRYSSGLDLRGVLADLLIEADEPHPTDNQAAAHVAP
Ga0265742_10099651	3300030874	Soil	GVPQARLTNYVLAHSRYSSGLDLRGVLADLLIEADEPQPTVNQAAAHVAP
Ga0073997_122105152	3300030997	Soil	PAAIPPTRLTNYVLAHSRYSSVLGQRGVLTDLLIDADEQQPAVSEASTPVAP
Ga0073998_115021971	3300031023	Soil	REAISYTVPTTSPAAPAAMPPARLTNYVFAHSRYSSGLAQRGVLADLLIEGDEPPPAIEQAAAHVAP
Ga0073995_100234371	3300031047	Soil	TAVAPSAREAISYTVPATSPAAPASIAPARLTNYVFAHSRYSSGLAQRGVMADLLIEAEEQQPAVNEAAAHVVP
Ga0073995_100522721	3300031047	Soil	AAPASIAPARLTNYVFAHSRYSSGLAQRGVMADLLIEADEPPPAVNEAAAHVVP
Ga0170834_1020905641	3300031057	Forest Soil	PTLPAGGMTSVAQTHREAISYTVPATSPAAPSGMPQARLTNYVLAHSRYSSGLDLRGVLADLLIEADEPQPVVNQAAAHVAP
Ga0170834_1048343692	3300031057	Forest Soil	VSYTVPAVSPTVPSGLPPARLTNYVLAHSRYSSGLDQRGVLADLLIEADEQAPAANQAAAHVQAAPVAP
Ga0265760_100763162	3300031090	Soil	PQARLTNYVLAHSRYSSGLDLRGVLADLLIEADEPQPTVNQAAAHVAP
Ga0170823_101989301	3300031128	Forest Soil	NLVAAPKTSEPISYTVPAVSPTVPSGMPPGRLTNYVLAHSRYSSGLDQRGVLADLLIEADEPAPAVNQAAAHVQAAPVAP
Ga0170824_1175653301	3300031231	Forest Soil	RLTNYVFAHSKYSSGLAQRGVMADLLIESDEQQSPAVNEAAAHVAP
Ga0170824_1274986231	3300031231	Forest Soil	PPARLTNYVLAHSRYSSGLDQRGVLADLLIEADEPAPAVNQAAAHVQAAPVAP
Ga0265340_101941582	3300031247	Rhizosphere	AQIAAVQAPREPISYTVPAPSDAPAAMAPARLTNYILAHSRYSSGLDQRGVVADMLIEADEQPVLNEAAAHAAP
Ga0310686_1047871282	3300031708	Soil	ASPAAPAAVMPLARLTKYVFAHSKYSSGLDQRGVLADLLIEADEQPAVHEAAAQVAP
Ga0310686_1134784212	3300031708	Soil	LVQNAVVAQGSAVPTPREAISYTVPATSQAAPSAMPPARLTNYVFAHSRYSSGLDQRGVLADLLIEAEEQPPPAHEAAAPVVP
Ga0307476_101747861	3300031715	Hardwood Forest Soil	LAPGRLTNYVFAHSQYSSGLAQRGVMADMLIESDQQQPAIEEAAAHVAP
Ga0306921_113597492	3300031912	Soil	APAAPTGLPPARLANYVLAHSRYSSGLDQRGVLADLLIEAEQAPAVNQAAHVVP
Ga0348332_114886542	3300032515	Plant Litter	SSAGLAVLPPARLTNYVFAHSRYSSGLAQRGLLADLLIENEEAQPAGTEAAARVAP
Ga0307510_104742241	3300033180	Ectomycorrhiza	PKTSEPISYTVPAVSPTVPSGMPPGRLTNYVLAHSRYSSGLDQRGVLADLLIEADEQAPAVNQAAAHVVP
Ga0326728_109409412	3300033402	Peat Soil	AVPAPREPISYTVPATSPAAPSAMPPARLTKYVFAHSRYSSGLDQHGVLADLLIESDEQQPAVSEAAAHVAP
Ga0370483_0264917_392_589	3300034124	Untreated Peat Soil	NLSYTVPPTFAAVPAVMPRARLTNYVFAHSRYSSGLDQRGLLADMLIEAEEQQPTVDAAAAHAAP
Ga0370515_0029836_2295_2444	3300034163	Untreated Peat Soil	MPQARLTNYVLAHSRYSSGLDLRGVLADLLIEADEAQPTVNQAAAHVAP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097713

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences