Metagenome / Metatranscriptome Family F097712

Basic Information
Family ID	F097712
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	38 residues
Representative Sequence	LTLYTTPVVYLAFDWLARRFSFHIGNPIEEPAHGD
Number of Associated Samples	89
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.08 %
% of genes from short scaffolds (< 2000 bps)	93.27 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Most Common Taxonomy
Group	Bacteria (96.154 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (28.846 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.192 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.16% β-sheet: 0.00% Coil/Unstructured: 69.84%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00873	ACR_tran	98.08
PF02915	Rubrerythrin	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.12 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.12 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.15 %
Unclassified	root	N/A	2.88 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	11.54 %
Unclassified	root	N/A	2.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.92 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.62 %
Unclassified	root	N/A	2.88 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	9.62 %
Unclassified	root	N/A	2.88 %
Acidobacteria bacterium 13_1_20CM_2_60_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	0.96 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.62 %
Unclassified	root	N/A	2.88 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.96 %
Acidobacteria bacterium 13_1_20CM_2_60_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.62 %
Unclassified	root	N/A	2.88 %
Deuterostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia	0.96 %
Acidobacteria bacterium 13_1_20CM_2_60_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.62 %
Unclassified	root	N/A	2.88 %
Chordata	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata	0.96 %
Acidobacteria bacterium 13_1_20CM_2_60_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.62 %
Unclassified	root	N/A	2.88 %
Craniata	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata	0.96 %
Acidobacteria bacterium 13_1_20CM_2_60_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.62 %
Unclassified	root	N/A	2.88 %
Vertebrata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata	0.96 %
Acidobacteria bacterium 13_1_20CM_2_60_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.62 %
Unclassified	root	N/A	2.88 %
Gnathostomata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata	0.96 %
Acidobacteria bacterium 13_1_20CM_2_60_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.62 %
Unclassified	root	N/A	2.88 %
Chondrichthyes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes	0.96 %
Acidobacteria bacterium 13_1_20CM_2_60_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.62 %
Unclassified	root	N/A	2.88 %
Elasmobranchii	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii	0.96 %
Acidobacteria bacterium 13_1_20CM_2_60_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.62 %
Unclassified	root	N/A	2.88 %
Selachii	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii	0.96 %
Acidobacteria bacterium 13_1_20CM_2_60_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.62 %
Unclassified	root	N/A	2.88 %
Galeomorphii	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii	0.96 %
Acidobacteria bacterium 13_1_20CM_2_60_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.62 %
Unclassified	root	N/A	2.88 %
Galeoidea	superorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea	0.96 %
Acidobacteria bacterium 13_1_20CM_2_60_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.62 %
Unclassified	root	N/A	2.88 %
Orectolobiformes	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes	0.96 %
Acidobacteria bacterium 13_1_20CM_2_60_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.62 %
Unclassified	root	N/A	2.88 %
Hemiscylliidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae	0.96 %
Acidobacteria bacterium 13_1_20CM_2_60_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.62 %
Unclassified	root	N/A	2.88 %
Chiloscyllium	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae → Chiloscyllium	0.96 %
Acidobacteria bacterium 13_1_20CM_2_60_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.62 %
Unclassified	root	N/A	2.88 %
Chiloscyllium punctatum	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae → Chiloscyllium → Chiloscyllium punctatum	0.96 %
Acidobacteria bacterium 13_1_20CM_2_60_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100255123	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae → Chiloscyllium → Chiloscyllium punctatum	1641	Open in IMG/M
3300004152\|Ga0062386_101166101	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	640	Open in IMG/M
3300005186\|Ga0066676_10186909	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1324	Open in IMG/M
3300005434\|Ga0070709_11134713	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300005518\|Ga0070699_101678382	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300005529\|Ga0070741_11690805	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300005537\|Ga0070730_10102053	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1984	Open in IMG/M
3300005541\|Ga0070733_10608414	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	733	Open in IMG/M
3300005542\|Ga0070732_10962085	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	522	Open in IMG/M
3300005558\|Ga0066698_10108788	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1837	Open in IMG/M
3300005591\|Ga0070761_10368750	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	872	Open in IMG/M
3300005764\|Ga0066903_103504452	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300005764\|Ga0066903_104224380	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300006041\|Ga0075023_100323581	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	643	Open in IMG/M
3300006050\|Ga0075028_100779639	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	581	Open in IMG/M
3300006052\|Ga0075029_101130029	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300006176\|Ga0070765_100693007	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300006806\|Ga0079220_10994565	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300007076\|Ga0075435_100447060	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300007255\|Ga0099791_10526979	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300009137\|Ga0066709_103820799	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300009143\|Ga0099792_10720284	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300010046\|Ga0126384_10541460	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300010360\|Ga0126372_10383093	All Organisms → cellular organisms → Bacteria → Proteobacteria	1276	Open in IMG/M
3300010360\|Ga0126372_11295379	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300010360\|Ga0126372_12236136	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300010360\|Ga0126372_12368998	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300010362\|Ga0126377_10983138	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300010366\|Ga0126379_13386694	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300010398\|Ga0126383_12948869	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300010400\|Ga0134122_11342265	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300011269\|Ga0137392_10995045	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300012096\|Ga0137389_10233160	All Organisms → cellular organisms → Bacteria	1542	Open in IMG/M
3300012202\|Ga0137363_10076913	All Organisms → cellular organisms → Bacteria	2475	Open in IMG/M
3300012211\|Ga0137377_10152870	All Organisms → cellular organisms → Bacteria	2211	Open in IMG/M
3300012349\|Ga0137387_10194786	All Organisms → cellular organisms → Bacteria	1454	Open in IMG/M
3300012361\|Ga0137360_10559623	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300012363\|Ga0137390_10090845	Not Available	3012	Open in IMG/M
3300012363\|Ga0137390_10198756	All Organisms → cellular organisms → Bacteria	1992	Open in IMG/M
3300012917\|Ga0137395_10330683	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300012922\|Ga0137394_10247314	All Organisms → cellular organisms → Bacteria	1524	Open in IMG/M
3300012922\|Ga0137394_11425002	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300012924\|Ga0137413_11799181	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300012925\|Ga0137419_10114247	All Organisms → cellular organisms → Bacteria	1894	Open in IMG/M
3300012925\|Ga0137419_11513067	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300012927\|Ga0137416_12181434	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300012929\|Ga0137404_11880746	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300012930\|Ga0137407_11503603	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300013308\|Ga0157375_11045909	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300015052\|Ga0137411_1154568	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300015241\|Ga0137418_10667107	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300015356\|Ga0134073_10118819	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300015373\|Ga0132257_100057741	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4344	Open in IMG/M
3300016404\|Ga0182037_10744257	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300016404\|Ga0182037_11359594	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300017656\|Ga0134112_10334866	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300017930\|Ga0187825_10030176	All Organisms → cellular organisms → Bacteria	1826	Open in IMG/M
3300017955\|Ga0187817_11102991	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300020170\|Ga0179594_10379251	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300020199\|Ga0179592_10507118	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300020580\|Ga0210403_11025457	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300020580\|Ga0210403_11305389	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300021046\|Ga0215015_10884863	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300021170\|Ga0210400_10937288	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300021170\|Ga0210400_11288153	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300021178\|Ga0210408_10272580	All Organisms → cellular organisms → Bacteria	1349	Open in IMG/M
3300021180\|Ga0210396_10606683	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300021404\|Ga0210389_11324684	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300021420\|Ga0210394_11737860	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300021432\|Ga0210384_11488694	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300021858\|Ga0213852_1123910	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300022557\|Ga0212123_10241942	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300025906\|Ga0207699_10887462	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300025941\|Ga0207711_10616235	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300026334\|Ga0209377_1199271	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300026356\|Ga0257150_1060467	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300026496\|Ga0257157_1038067	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300026551\|Ga0209648_10813701	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300027645\|Ga0209117_1011815	Not Available	2931	Open in IMG/M
3300027645\|Ga0209117_1123493	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300027738\|Ga0208989_10164060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	744	Open in IMG/M
3300027787\|Ga0209074_10090427	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300027846\|Ga0209180_10194189	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300027846\|Ga0209180_10645453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	581	Open in IMG/M
3300027857\|Ga0209166_10270343	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300027903\|Ga0209488_10412335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	999	Open in IMG/M
3300028047\|Ga0209526_10334979	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300031090\|Ga0265760_10034485	All Organisms → cellular organisms → Bacteria	1497	Open in IMG/M
3300031231\|Ga0170824_127436055	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300031549\|Ga0318571_10457917	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300031720\|Ga0307469_10929935	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300031720\|Ga0307469_12348886	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300031720\|Ga0307469_12492838	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300031754\|Ga0307475_11325030	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300031768\|Ga0318509_10195853	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300031768\|Ga0318509_10429130	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300031782\|Ga0318552_10669999	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300031795\|Ga0318557_10349029	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300031833\|Ga0310917_11052320	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300032054\|Ga0318570_10174507	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300032067\|Ga0318524_10141892	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300032180\|Ga0307471_100057118	Not Available	3265	Open in IMG/M
3300032893\|Ga0335069_10110451	All Organisms → cellular organisms → Bacteria	3458	Open in IMG/M
3300034124\|Ga0370483_0128020	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.15%
Host-Associated	Host-Associated	3.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.46%
Aquatic	Environmental → Aquatic	7.69%
Plants	Host-Associated → Plants	3.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.46%
Freshwater	Environmental → Aquatic → Freshwater	3.85%
Sediment	Environmental → Aquatic → Sediment	2.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.88%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.00%
Loam	Environmental → Terrestrial → Soil → Loam	11.54%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.96%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.96%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.69%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.81%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.88%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.92%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.96%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.96%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.96%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021858	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097712

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1002551232	3300002245	Forest Soil	LSQLLTLYTTPVVYLAFDWLANRLHLGITNPVDEPATGD*
Ga0062386_1011661011	3300004152	Bog Forest Soil	LILSQVLTLYTTPVVYLAFDWLATRLHLGISNAADEPAPGD*
Ga0066676_101869091	3300005186	Soil	LSQLLTLYTTPVVYLAFDWLARRFAFHIGNPIEEPAHGD*
Ga0070709_111347131	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	SQILTLYTTPVVYLAFDWLSRHVPLGFGNPIDEPAAEHSGD*
Ga0070699_1016783822	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LSQILTLYTTPVVYLAFDWLSRHVPLGFGNPIDEPAAEHSGD*
Ga0070741_116908051	3300005529	Surface Soil	LLTLYTTPVVYLAFDRLAQRFARFRIGNPIDEPAGAD*
Ga0070730_101020531	3300005537	Surface Soil	ILTLYTTPVVYLAFDWLSRRFAFHLGNPIDEAAAQDYGD*
Ga0070733_106084142	3300005541	Surface Soil	SQLLTLYTTPVVYLAFDWLSHRFEVQIGNPIEEPAHGD*
Ga0070732_109620852	3300005542	Surface Soil	SQLLTLYTTPVVYLAFDWLARRFAVHIGNPVEEPAHGD*
Ga0066698_101087881	3300005558	Soil	LILSQLLTLYTTPVIYLAFDWLARRFAFHVGNPIEEPATGD*
Ga0070761_103687502	3300005591	Soil	SQLLTLYTTPVVYLAFDWLARRFAFNIGNSIEEPAHGD*
Ga0066903_1035044521	3300005764	Tropical Forest Soil	LILSQLLTLYTTPVVYLAFDWLANRLNLGISNPVDEPVQGD*
Ga0066903_1042243802	3300005764	Tropical Forest Soil	IVSQLLTLYTTPVVYLAFDWLGRHLNLGVANPAEEPLAGD*
Ga0075023_1003235812	3300006041	Watersheds	ILSQLLTLYTTPVVYLAFDWLAHRFSFHIGNPTEEPATGD*
Ga0075028_1007796391	3300006050	Watersheds	LILSQLLTLYTTPVVYLAFDWLAHRFSFRVGNPIEEPAHGTAPGD*
Ga0075029_1011300292	3300006052	Watersheds	TLYTTPVVYLAFDWLASRLHLGISNPIDEPSPGD*
Ga0070765_1006930072	3300006176	Soil	LSQLLTLYTTPVVYLAFDWLAHRFEARIGGPVEEPAHGD*
Ga0079220_109945652	3300006806	Agricultural Soil	VLTLYTTPVVYLAFDWLARRFAVHFGNPVEQPAHGD*
Ga0075435_1004470601	3300007076	Populus Rhizosphere	LTLYTTPVVYLAFDWLANRLHLGITNTADEAALGD*
Ga0099791_105269792	3300007255	Vadose Zone Soil	LLTLYTTPVVYLAFDWLGRRFAFQIGNPIEEPAHGD*
Ga0066709_1038207992	3300009137	Grasslands Soil	LLTLYTTPVVYLAFDWLGRRFAFHVGNPIEAPAHGD*
Ga0099792_107202842	3300009143	Vadose Zone Soil	TLYTTPVVYLAFDWLGRRFAFHVGNPIEEPAPGD*
Ga0126384_105414602	3300010046	Tropical Forest Soil	QLLTLYTTPVVYLAFDRLARRFSRYRIGNPIEGSATAD*
Ga0126372_103830931	3300010360	Tropical Forest Soil	LTLYTTPVVYLAFERLGRRFERFRIGNRIEEPAVAE*
Ga0126372_112953792	3300010360	Tropical Forest Soil	TLYTTPVVYLAFDWLGRRFQFHVGNPIEEPAHGD*
Ga0126372_122361361	3300010360	Tropical Forest Soil	QILTLYTTPVVYLAFDWLARRFAFRVGNPIEEPAHGD*
Ga0126372_123689981	3300010360	Tropical Forest Soil	QLLTLYTTPVVYLAFDRLARRFSRYRIGNPIEGAATAD*
Ga0126377_109831382	3300010362	Tropical Forest Soil	ILTLYTTPVVYLAFDWLARRFAFRVGNPIEEPAHGD*
Ga0126379_133866941	3300010366	Tropical Forest Soil	LLTLYTTPVVYLAFDWLGRRFQFHVGNPIEEPAHGD*
Ga0126383_129488692	3300010398	Tropical Forest Soil	LTLYTTPVVYLAFDWLASRLNLGISNPMDEPAHGD*
Ga0134122_113422652	3300010400	Terrestrial Soil	LTLYTTPVVYLAFDWLSRRFAFNIGNPVDDAALHQPGD*
Ga0137392_109950452	3300011269	Vadose Zone Soil	ILSQLLTLYTTPVVYLAFDWLARRFQIQIGNPIEEPAPGD*
Ga0137389_102331602	3300012096	Vadose Zone Soil	LILSQLLTLYTTPVVYLAFDWLANRLHLGISNPLDEPATGD*
Ga0137363_100769131	3300012202	Vadose Zone Soil	QLLTLYTTPVVYLAFDWLGRRFAFHVGNPIEEPAAGD*
Ga0137377_101528701	3300012211	Vadose Zone Soil	TTPVVYLAFDWLAHRFSFHVGNPIEEPAHGSVPGD*
Ga0137387_101947862	3300012349	Vadose Zone Soil	LLTLYTTPVVYLAFDWLGRRFAFHVGNPIEEPAHGD*
Ga0137360_105596231	3300012361	Vadose Zone Soil	LYTTPVVYLAFDWLSRRFSLGFGNPIDDPAVEHYGD*
Ga0137390_100908451	3300012363	Vadose Zone Soil	TLYTTPVVYLAFDWLGRRFAFRIGNPVEEPAHGD*
Ga0137390_101987562	3300012363	Vadose Zone Soil	LLTLYTTPVVYLAFDWLGRRFAFHVGNPIEEPATGD*
Ga0137395_103306832	3300012917	Vadose Zone Soil	LYTTPVVYLAFDWVAHRFQFHVGNPIEDPAGAAGN*
Ga0137394_102473142	3300012922	Vadose Zone Soil	QILTLYTTPVVYLAFDWLSRHLPLGFGNPMDEPAVEHSGD*
Ga0137394_114250022	3300012922	Vadose Zone Soil	LTLYTTPVVYLAFDWLANRLHLGITNSIDEPATGD*
Ga0137413_117991812	3300012924	Vadose Zone Soil	VLTLYTTPVVYLAFDWLSRRFSLGFGNPIDDPAVEHYGD*
Ga0137419_101142472	3300012925	Vadose Zone Soil	LTLYTTPVVYLAFDWLGRRFAFHVGNPIEAPAHGD*
Ga0137419_115130672	3300012925	Vadose Zone Soil	LILSQILTLYTTPVVYLAFDWIAHRFQFHIGNPIEDAPGAAGD*
Ga0137416_121814341	3300012927	Vadose Zone Soil	QILTLYTTPVVYLAFDWLARRFAFHIGNPVEEPAHGD*
Ga0137404_118807461	3300012929	Vadose Zone Soil	QLLTLYTTPVIYLAFDWLAHRFSWHIGNPIEEPARGD*
Ga0137407_115036032	3300012930	Vadose Zone Soil	LYTTPVVYLAFDWLAHRFSFHVGNPAEEPAHESAPGD*
Ga0157375_110459092	3300013308	Miscanthus Rhizosphere	QILTLYTTPVVYLAFDWLSRRFSFRLGNPIDEAALHQPGD*
Ga0137411_11545681	3300015052	Vadose Zone Soil	LTLYTTPVVYLAFDWIAHRFQFHIGNPVEDPAPGD*
Ga0137418_106671071	3300015241	Vadose Zone Soil	ILSQLLTLYTTPVVYLAFDWLGRRFAFHVGNPIEAPAHGD*
Ga0134073_101188191	3300015356	Grasslands Soil	SQLLTLYTTPVVYLAFDWLSRRFEFHIGNPIEEPSPGD*
Ga0132257_1000577411	3300015373	Arabidopsis Rhizosphere	LSQILTLYTPPVVYLAFDWLSRRFSFHIGNPMDEAALHQPGD*
Ga0182037_107442571	3300016404	Soil	QLLTLYTTPVVYLAFDWLGRHLNLGFTNSAEEPAAGD
Ga0182037_113595941	3300016404	Soil	LYTTPVVYLAFDWLSRHINFGFTNPIDDPAVEHGD
Ga0134112_103348661	3300017656	Grasslands Soil	LTLYTTPVVYLAFDWLARRFSFHIGNPIEEPAHGD
Ga0187825_100301761	3300017930	Freshwater Sediment	QLLTLYTTPVVYLAFDRLASRFARYRIGNPIEGSATAD
Ga0187817_111029911	3300017955	Freshwater Sediment	LSQLLTLYTTPVVYLAFDWLAHRFAVHIGNPIEEPAHGD
Ga0179594_103792511	3300020170	Vadose Zone Soil	LLTLYTTPVVYLAFDRLGKRFSRFRVGNPIEETVVVE
Ga0179592_105071182	3300020199	Vadose Zone Soil	SQLLTLYTTPVVYLAFDWLANRLHLGISNPIDEPATGD
Ga0210403_110254572	3300020580	Soil	LTLYTTPVVYLAFDWLANRLHLGIANPVDEPATGD
Ga0210403_113053891	3300020580	Soil	ILSQLLTLYTTPVVYLAFDWLAHRFSFHVGNPVDEPAHESAPGD
Ga0215015_108848632	3300021046	Soil	LTLYTTPVVYLAFDWLGRRFQIHIGSSVEEPAHGD
Ga0210400_109372881	3300021170	Soil	LYTTPVVYLAFDWLAHRFSFHVGNPIEEPVPGTAPGD
Ga0210400_112881531	3300021170	Soil	QVLTLYTTPVVYLAFDWLANRLHLGITNTADEAALGD
Ga0210408_102725802	3300021178	Soil	LSQLLTLYTTPVVYLAFDWLASRLHLGIANPIDEPATGD
Ga0210396_106066832	3300021180	Soil	SQLLTLYTTPVVYLAFDWLARRFAFQIGNSIEEPAHGD
Ga0210389_113246841	3300021404	Soil	ILSQLLTLYTTPVVYLAFDWLSHRFTFNFGNSVPTEEISHGD
Ga0210394_117378602	3300021420	Soil	QLLSLYATPVVYLAFDWLASRLHLGITNPIDEPATGD
Ga0210384_114886941	3300021432	Soil	YTTPVVYLAFDWLAHRFSFHVGNPIEEPAPGTAPGD
Ga0213852_11239102	3300021858	Watersheds	LTLYTTPVVYLAFDWLGRRFSFRVGNPIEEPAPESLSGD
Ga0212123_102419422	3300022557	Iron-Sulfur Acid Spring	LSQLLTLYTTPVVYLAFDWLARRFTFRFGNSFSDEELAHGD
Ga0207699_108874622	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	TLYTTPVVYLAFDWLSRHVPLGFGNPIDEPAAEHSGD
Ga0207711_106162352	3300025941	Switchgrass Rhizosphere	LYTTPVVYLAFDWLSRRFAFNIGNPVDDAALHQPGD
Ga0209377_11992712	3300026334	Soil	LTLYTTPVVYLAFDWLGRRFAFNIGNPIEEPAPGD
Ga0257150_10604671	3300026356	Soil	LSQLLTLYTTPVVYLAFDWLANRLHLGITNPVDEPATGD
Ga0257157_10380671	3300026496	Soil	LTLYTTPVVYLAFDWLAHRFAFRVGNPIEEPAHGTAPGD
Ga0209648_108137011	3300026551	Grasslands Soil	QLLTLYTTPVVYLAFDWLGRRFAFHVGNPIEEPAPGD
Ga0209117_10118152	3300027645	Forest Soil	WLTLYTTPVVYLAFDWLARRFSFHFGNPVEEPAPGTASGD
Ga0209117_11234931	3300027645	Forest Soil	SQVLTLYTTPVVYLAFDWLSRRFSLGFANPIDDPAVEHYGD
Ga0208989_101640601	3300027738	Forest Soil	ILSQLLTLYTTPVVYLAFDWLGRRFAFHIGNPIEEPAHGD
Ga0209074_100904272	3300027787	Agricultural Soil	QLLTLYTTPVVYLAFDRLARKLQRFRVGNRIDETATQSV
Ga0209180_101941891	3300027846	Vadose Zone Soil	SQLLTLYTTPVVYLAFDWLGRRFAFHVGNPIEEPATGD
Ga0209180_106454532	3300027846	Vadose Zone Soil	TLYTTPVVYLAFDWIAHRFQFHIGNPIEDPAGAAGD
Ga0209166_102703431	3300027857	Surface Soil	ILTLYTTPVVYLAFDWLSRRFAFHLGNPIDEAAAQDYGD
Ga0209488_104123353	3300027903	Vadose Zone Soil	LSQLLTLYTTPVVYLAFDWLARRFAFHVGNPIEEPAQGAIPGD
Ga0209526_103349791	3300028047	Forest Soil	TLYTTPVVYLAFDWLAHRFSFHVGNPIEEPAHGSAPGD
Ga0265760_100344852	3300031090	Soil	LSQLLTLYTTPVVYLAFDWLAHRFAFQIGNSFEEPAHGD
Ga0170824_1274360551	3300031231	Forest Soil	LSQILTLYTTPVVYLAFDWVARRFQFHIGNPIEDAAGATGD
Ga0318571_104579171	3300031549	Soil	ILSQILTLYTTPVVYLAFDWLSRRFTFTLGNPIEEAARQHYGD
Ga0307469_109299352	3300031720	Hardwood Forest Soil	SQLLTLYTTPVVYLAFERLGRRFERFRVGNRIEEPAVAE
Ga0307469_123488861	3300031720	Hardwood Forest Soil	LSQLLTLYTTPVIYLAFDWLAHRFSWHIGNPIEEPAPGD
Ga0307469_124928382	3300031720	Hardwood Forest Soil	SQLLTLYTTPVIYLAFDWLAHRFSWHIGNPIEEPARGD
Ga0307475_113250301	3300031754	Hardwood Forest Soil	ILSQLLTLYTTPVVYLAFDWLAHRFSFHVGNPIEEPAPGTAPGD
Ga0318509_101958532	3300031768	Soil	LILSQILTLYTTPVVYLAFDWLSRRFAFQIGNPTDEAALHQPGD
Ga0318509_104291302	3300031768	Soil	SQLLTLYTTPVVYLAFDWLGRHLNLGISNPAEEPAAGD
Ga0318552_106699992	3300031782	Soil	LYTTPVVYLAFDWLSRRFAFQIGNPTDEAALHQPGD
Ga0318557_103490292	3300031795	Soil	IFSQLLTLYTTPVVYLAFDWLARRFQIHIGNPIEEPAPGD
Ga0310917_110523202	3300031833	Soil	LLTLYTTPVVYLAFDWLANRLHLGVTNVEEPATGD
Ga0318570_101745071	3300032054	Soil	LSQLLTLYTTPVVYLAFDWLSRKLRLGITNTLEEPATGD
Ga0318524_101418922	3300032067	Soil	LLTLYTTPVVYLAFDWLGRHLNLGVANPAEEPLAGD
Ga0307471_1000571181	3300032180	Hardwood Forest Soil	LTLYTTPVVYLAFDWIARRFGFQANTDLAAEAPAHGD
Ga0335069_101104511	3300032893	Soil	LILSQLLTLYTTPVVYLAFDWLASRLHLGITNPVDEPAHGD
Ga0370483_0128020_735_845	3300034124	Untreated Peat Soil	TLYTTPVVYLAFDWLARRFTFRLGNSFSDEELAHGD

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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