Metagenome Family F097683

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097683
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	50 residues
Representative Sequence	MRRLIAALVFCLLNIPVRAEDCVASVYAVGDSSQPGTKTASGIPL
Number of Associated Samples	70
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	99.04 %
% of genes from short scaffolds (< 2000 bps)	89.42 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (57.692 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (43.269 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.385 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 32.88% β-sheet: 2.74% Coil/Unstructured: 64.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00291	PALP	2.88
PF04519	Bactofilin	1.92
PF01381	HTH_3	1.92
PF03401	TctC	0.96
PF08241	Methyltransf_11	0.96
PF10503	Esterase_PHB	0.96
PF00072	Response_reg	0.96
PF04392	ABC_sub_bind	0.96
PF06904	Extensin-like_C	0.96
PF00296	Bac_luciferase	0.96
PF13426	PAS_9	0.96
PF13333	rve_2	0.96
PF02518	HATPase_c	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	1.92
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.96
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.96
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.96
COG3921	Uncharacterized conserved protein, contains Extensin-like_C domain	Function unknown [S]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
All Organisms	root	All Organisms	42.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
cellular organisms	root	All Organisms → cellular organisms	42.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.65 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	27.88 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	10.58 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.58 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.58 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.88 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.96 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.88 %
Bradyrhizobium sp. SRL28	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRL28	0.96 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY01D5XSF	Not Available	502	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2116051	Not Available	565	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10161579	Not Available	535	Open in IMG/M
3300000955\|JGI1027J12803_103682750	Not Available	831	Open in IMG/M
3300005332\|Ga0066388_104972698	All Organisms → cellular organisms → Bacteria → Proteobacteria	676	Open in IMG/M
3300005332\|Ga0066388_105766213	Not Available	626	Open in IMG/M
3300005332\|Ga0066388_106430458	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300005332\|Ga0066388_106494750	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300005332\|Ga0066388_108342504	Not Available	516	Open in IMG/M
3300005340\|Ga0070689_100825494	Not Available	816	Open in IMG/M
3300005355\|Ga0070671_100462047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1089	Open in IMG/M
3300005563\|Ga0068855_100934995	Not Available	914	Open in IMG/M
3300005713\|Ga0066905_100610671	Not Available	924	Open in IMG/M
3300005764\|Ga0066903_101501259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1272	Open in IMG/M
3300005764\|Ga0066903_101713115	Not Available	1197	Open in IMG/M
3300005764\|Ga0066903_102281171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1045	Open in IMG/M
3300005764\|Ga0066903_105314576	Not Available	680	Open in IMG/M
3300005764\|Ga0066903_105477193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	669	Open in IMG/M
3300005764\|Ga0066903_106321859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	618	Open in IMG/M
3300005764\|Ga0066903_107743085	Not Available	553	Open in IMG/M
3300005764\|Ga0066903_108863177	Not Available	510	Open in IMG/M
3300005764\|Ga0066903_109095072	Not Available	502	Open in IMG/M
3300005841\|Ga0068863_102075946	Not Available	578	Open in IMG/M
3300005841\|Ga0068863_102412184	Not Available	535	Open in IMG/M
3300006059\|Ga0075017_101133336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	611	Open in IMG/M
3300006177\|Ga0075362_10293288	Not Available	806	Open in IMG/M
3300006846\|Ga0075430_100959666	Not Available	704	Open in IMG/M
3300006854\|Ga0075425_102425713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	582	Open in IMG/M
3300006880\|Ga0075429_100696341	Not Available	890	Open in IMG/M
3300009098\|Ga0105245_10040663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4143	Open in IMG/M
3300009176\|Ga0105242_12625832	Not Available	553	Open in IMG/M
3300010043\|Ga0126380_10023849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2989	Open in IMG/M
3300010043\|Ga0126380_11116141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	673	Open in IMG/M
3300010047\|Ga0126382_11429792	Not Available	632	Open in IMG/M
3300010047\|Ga0126382_11520525	Not Available	617	Open in IMG/M
3300010048\|Ga0126373_13190513	Not Available	510	Open in IMG/M
3300010358\|Ga0126370_11239605	Not Available	696	Open in IMG/M
3300010360\|Ga0126372_10394624	Not Available	1260	Open in IMG/M
3300010360\|Ga0126372_11952375	Not Available	633	Open in IMG/M
3300010361\|Ga0126378_11560117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	749	Open in IMG/M
3300010366\|Ga0126379_11244374	Not Available	851	Open in IMG/M
3300010366\|Ga0126379_12993722	Not Available	565	Open in IMG/M
3300010376\|Ga0126381_102097204	Not Available	814	Open in IMG/M
3300010376\|Ga0126381_104977010	Not Available	510	Open in IMG/M
3300010398\|Ga0126383_12399846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	612	Open in IMG/M
3300010863\|Ga0124850_1021342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2073	Open in IMG/M
3300012203\|Ga0137399_11679593	Not Available	523	Open in IMG/M
3300012961\|Ga0164302_11806073	Not Available	516	Open in IMG/M
3300012971\|Ga0126369_12727425	Not Available	578	Open in IMG/M
3300012987\|Ga0164307_10642778	Not Available	823	Open in IMG/M
3300016270\|Ga0182036_10281020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1258	Open in IMG/M
3300016319\|Ga0182033_11722647	Not Available	568	Open in IMG/M
3300016357\|Ga0182032_11040923	Not Available	700	Open in IMG/M
3300016371\|Ga0182034_10026228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3568	Open in IMG/M
3300016371\|Ga0182034_11008433	Not Available	719	Open in IMG/M
3300016422\|Ga0182039_10544215	Not Available	1008	Open in IMG/M
3300016445\|Ga0182038_10026976	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3551	Open in IMG/M
3300016445\|Ga0182038_10643868	Not Available	919	Open in IMG/M
3300016445\|Ga0182038_11092666	Not Available	709	Open in IMG/M
3300016445\|Ga0182038_11309841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	648	Open in IMG/M
3300018481\|Ga0190271_11719836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	740	Open in IMG/M
3300021086\|Ga0179596_10676126	Not Available	523	Open in IMG/M
3300021560\|Ga0126371_10839143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1064	Open in IMG/M
3300021560\|Ga0126371_12265786	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300021560\|Ga0126371_12584816	Not Available	615	Open in IMG/M
3300025898\|Ga0207692_10189097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1204	Open in IMG/M
3300026550\|Ga0209474_10335627	Not Available	860	Open in IMG/M
3300027874\|Ga0209465_10048565	Not Available	2027	Open in IMG/M
3300031226\|Ga0307497_10715185	Not Available	518	Open in IMG/M
3300031543\|Ga0318516_10320795	Not Available	895	Open in IMG/M
3300031545\|Ga0318541_10030674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2661	Open in IMG/M
3300031572\|Ga0318515_10203772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRL28	1060	Open in IMG/M
3300031744\|Ga0306918_10014942	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4535	Open in IMG/M
3300031744\|Ga0306918_10451869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1004	Open in IMG/M
3300031744\|Ga0306918_10549903	Not Available	904	Open in IMG/M
3300031744\|Ga0306918_11132891	Not Available	605	Open in IMG/M
3300031748\|Ga0318492_10778287	Not Available	514	Open in IMG/M
3300031751\|Ga0318494_10382307	Not Available	816	Open in IMG/M
3300031763\|Ga0318537_10084342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1172	Open in IMG/M
3300031765\|Ga0318554_10328183	All Organisms → cellular organisms → Bacteria → Proteobacteria	870	Open in IMG/M
3300031778\|Ga0318498_10424010	Not Available	590	Open in IMG/M
3300031794\|Ga0318503_10127869	Not Available	815	Open in IMG/M
3300031805\|Ga0318497_10420254	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300031833\|Ga0310917_11055661	Not Available	543	Open in IMG/M
3300031879\|Ga0306919_10335308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1153	Open in IMG/M
3300031890\|Ga0306925_10103101	Not Available	3038	Open in IMG/M
3300031890\|Ga0306925_10191958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2201	Open in IMG/M
3300031890\|Ga0306925_10299043	Not Available	1731	Open in IMG/M
3300031910\|Ga0306923_12281895	Not Available	540	Open in IMG/M
3300031946\|Ga0310910_10841956	Not Available	721	Open in IMG/M
3300031954\|Ga0306926_10873271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1079	Open in IMG/M
3300031954\|Ga0306926_11875616	Not Available	678	Open in IMG/M
3300031981\|Ga0318531_10030264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2219	Open in IMG/M
3300032001\|Ga0306922_10663668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1100	Open in IMG/M
3300032025\|Ga0318507_10260210	All Organisms → cellular organisms → Bacteria → Proteobacteria	753	Open in IMG/M
3300032041\|Ga0318549_10374030	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300032055\|Ga0318575_10469047	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300032064\|Ga0318510_10207095	All Organisms → cellular organisms → Bacteria → Proteobacteria	794	Open in IMG/M
3300032261\|Ga0306920_100462119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1885	Open in IMG/M
3300032261\|Ga0306920_101226042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1083	Open in IMG/M
3300032261\|Ga0306920_102043312	All Organisms → cellular organisms → Bacteria → Proteobacteria	801	Open in IMG/M
3300032261\|Ga0306920_103775352	Not Available	554	Open in IMG/M
3300033289\|Ga0310914_11325072	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300033289\|Ga0310914_11594330	Not Available	556	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.38%
Host-Associated	Host-Associated	9.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.42%
Plants	Host-Associated → Plants	9.62%
Aquatic	Environmental → Aquatic	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.77%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.88%
Sediment	Environmental → Aquatic → Sediment	0.96%
Roots	Host-Associated → Plants → Roots	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.15%
Loam	Environmental → Terrestrial → Soil → Loam	18.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.81%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	44.23%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	16.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.96%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.96%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_00793850	2170459010	Grass Soil	MRWLIAALVLCLLNIPVRAEDCVASVYAIGDSSQPGTKTASGIPLND
ICChiseqgaiiDRAFT_21160512	3300000033	Soil	MRRLIAALVLCLLDIPVRAEDCVASVYAVGDSSQPGTKTASGIPLSDNAMTA
AF_2010_repII_A1DRAFT_101615792	3300000597	Forest Soil	MRRLIAVLVLCLLDIPVRAEDCVASVYAVGDSSQRGTKTASGIPIN
JGI1027J12803_1036827501	3300000955	Soil	MRRLIAALVFCLLNIPVRAEDCVASEYAVGDSSQPETKTASGIPLNDTVMTAAHKSLPFGSKVKV
Ga0066388_1049726982	3300005332	Tropical Forest Soil	MRRLIAALVLCSLNIPVRAEDCVASVYTMGDSSQPGTKTASGIPLNDNAMTAAHK
Ga0066388_1057662131	3300005332	Tropical Forest Soil	MRRLIAALVFCLLNIPVLAEDCVASVYAVGDSSQRGTKTASGIPL
Ga0066388_1064304582	3300005332	Tropical Forest Soil	MRRLIAALVFCLLNIPVRAEDCVASVYAVGDSSQPGTKTASGIPL
Ga0066388_1064947502	3300005332	Tropical Forest Soil	MRQLIAALVFCLLSIPVRAEDCVASEYAVGNSSQPATNTASGIPLNDDVMTAAHKSLP
Ga0066388_1083425041	3300005332	Tropical Forest Soil	MRRLIAALVLCLLHIPVRAEDCVASVYSLGDSSQPGTKTASGTPLNENA
Ga0070689_1008254942	3300005340	Switchgrass Rhizosphere	MRRLIAALVLCLVNFSARGEECVASVYGVGDSSQPGTTTASGIP
Ga0070671_1004620474	3300005355	Switchgrass Rhizosphere	MRRLIAALVLCLVNFSARGEECVASVYGVGDSSQPGTTTASGIPLDDNA
Ga0068855_1009349953	3300005563	Corn Rhizosphere	MRRLIAALVLCLVNISARGEECIASVYALGDSSQPGTTT
Ga0066905_1006106711	3300005713	Tropical Forest Soil	MRRLIAALVFCLLNVPVLAEDCVASVYAVGDSSQRGTKTASGIPLDDN
Ga0066903_1015012593	3300005764	Tropical Forest Soil	MRRLIAAFVFCLFNIPVEAEDCVASVYVVGDSSQRGTKTTSGIPLNDNVMTAAHKSLPFGSK
Ga0066903_1017131151	3300005764	Tropical Forest Soil	MRRLIAALVFCLFNIPVRAEDCVASVYAVGDSSQLGTKTASGIPHDDNAMTAAHKSL
Ga0066903_1022811713	3300005764	Tropical Forest Soil	MRRLIAALVFCLLNSPVRVEDCVASEYAVGDSSQRGTK
Ga0066903_1053145762	3300005764	Tropical Forest Soil	MRRLIAALVFCLLHIPVRAEDCVASEYAVGDSSQPGTKTASGIPLNDNVMTAAHKSLPFGSK
Ga0066903_1054771931	3300005764	Tropical Forest Soil	MRRLIAALLVCLLDIPVRAEDCVASVYAVGDPSQPGTKTASGIPL
Ga0066903_1063218592	3300005764	Tropical Forest Soil	MRRLIAALVFCLLNISVRAEDCVASGYAVGDSSQAGTKTASGIPLNDNVMTAAHKSLPFG
Ga0066903_1077430851	3300005764	Tropical Forest Soil	MRRLIAALLICLLDIPVRAEDCVASVYAVGDPSQPGTK
Ga0066903_1088631771	3300005764	Tropical Forest Soil	MRRLIAALVLFLLDIPVRAEDCVASVYAVGDSSQRGTKTASAIPINDNAM
Ga0066903_1090950721	3300005764	Tropical Forest Soil	MRWLIAAFVLCLLSIPVRAEDCVASEYAVGDSSQRGTKTASG
Ga0068863_1020759462	3300005841	Switchgrass Rhizosphere	MRLLIATLLLCLLVIPSRAEDCIASVYATGDPSQPGTKTASGVPLDD
Ga0068863_1024121841	3300005841	Switchgrass Rhizosphere	MRRLIAALVLCLVNFSARGEECVASVYGVVDSSQPGTTTASGIP
Ga0075017_1011333361	3300006059	Watersheds	MRWLIAALVLCLLNIPVRAEDCVASVYAIVDSSQPGTKTASGIPLNDNVVTAAHKSLPFGSKVKVT
Ga0075362_102932882	3300006177	Populus Endosphere	VRSCIAVLLLCLFSGASRAEDCIASIYSIGDRSQRGTRTASGIPLDDNAMTAAHRTL
Ga0075430_1009596662	3300006846	Populus Rhizosphere	VRACIAVLLFCLLNGPTLAEDCIASVYAIGDRSQKDTRTASGVPLDNNAMTAAHKSLKFGSKV
Ga0075425_1024257131	3300006854	Populus Rhizosphere	MRRLIAALVFCLLNIPVHAEDCVASVYAVGDSSQP
Ga0075429_1006963411	3300006880	Populus Rhizosphere	VRSCIALLLPCLFSSATSAEDCIASVYSIGDSSQPGTQTASGIPLDDN
Ga0105245_100406631	3300009098	Miscanthus Rhizosphere	MRRLIAALVLCLVNFSARGEECVASVYGVGDSSQPGTTTAS
Ga0105242_126258321	3300009176	Miscanthus Rhizosphere	MRLLVASILLCSVVIPVRAEDCIASVYGVGDPSQPGTQTASGIPLSDTAMTGAHKSLPFLSRVRVINKKN
Ga0126380_100238491	3300010043	Tropical Forest Soil	MRRLIAVLVICFLDIPVRAEDCVASVYAMGDSSQSGTKTASGIPLNNNAMTA
Ga0126380_111161412	3300010043	Tropical Forest Soil	MRRLVAALVFCLLNIPVLAEDCVASEYAVGDSSQPRTKTASGIPLNDNVLTAAHK
Ga0126382_114297921	3300010047	Tropical Forest Soil	MRRLIAALIFCLLNIPVLAEDCVASVYTVGDSSQRGTKTASGIPLDDNAM
Ga0126382_115205252	3300010047	Tropical Forest Soil	MRRLIAVLVLCSFDIPVRAEDCVASEYAVGDSSQRGTKTANGIPLDDSVMTAA
Ga0126373_131905131	3300010048	Tropical Forest Soil	MRKLVAALLLCLLDIPLHAEDCVASVYAVSDPSQRGTK
Ga0126370_112396052	3300010358	Tropical Forest Soil	MRRLIAVLVLCSFDIPVRAEDCVASVYAVDDSSQRGTKTASGMPINDNAMTAAHKSL
Ga0126372_103946241	3300010360	Tropical Forest Soil	MRRLIAALVFCLLNIPVHSEDCVASVYAVGESSQPGTKTASGLPHDDN
Ga0126372_119523752	3300010360	Tropical Forest Soil	MRWLIAAHVFCLLNIPVRAEDCVASVYVVGDSSQPGTKTASGIPLNDNAM
Ga0126378_115601172	3300010361	Tropical Forest Soil	MRRLIAALLVCLLDIPVRAEDCVASVYAVGELSQPGTKTASGIPLSDGAMTAAHKSLPF
Ga0126379_112443741	3300010366	Tropical Forest Soil	MRRLIAALVLCLLDIPVRAEDCVASAYAMGDSSQPGTKTGSGVSLND
Ga0126379_129937221	3300010366	Tropical Forest Soil	MRRLIAALVLCLLHIPVRAEDCVASVYSLGDSSQPGTKTASGTPLNENAMTA
Ga0126381_1020972042	3300010376	Tropical Forest Soil	MRWLIAAFVLCLLSIPVRAEDCVASEYAVGDSSQRGTKTAS
Ga0126381_1049770101	3300010376	Tropical Forest Soil	MPRLIAALLVYFLDIPVRAEDCVASVYARGESSQPGTKTASGIPLNDN
Ga0126383_123998462	3300010398	Tropical Forest Soil	MRRLIAALVFCLLNIPVHAEDCVASVYAVGDSSRRGTKTASGIPLDDN
Ga0124850_10213424	3300010863	Tropical Forest Soil	MRRLIAGLVFCLLNIPVYAEDCVASVYAVGDSSQPGTKTASGIPLDDNAMTAAHKSL
Ga0137399_116795931	3300012203	Vadose Zone Soil	MRRLIAALVLCLLHIPARAEDCVASVYSLGDPSQPGTKTASGTPLNDDAMTAAHKS
Ga0164302_118060732	3300012961	Soil	MRRLIAALVLCLVNFSARGEECVASVYGVGDSSQPGT
Ga0126369_127274252	3300012971	Tropical Forest Soil	MRRLIAALILCLLDVPVRAEDCVASVYAVGDSSQPGTK
Ga0164307_106427781	3300012987	Soil	MRRLIAALVVCLANISARGEECIASVYALGDSSQPGTTTASGIPLDDNAMTA
Ga0182036_102810203	3300016270	Soil	MRRLIAALVFCLHNIPVLAEDCVASVYAMGDSSQPGTKTASGIPHDDNAMTAAHKSLPFG
Ga0182033_117226472	3300016319	Soil	MRRLIAALVFCLFNIPIHAEDCVASVYAVGDSSQPGTKTA
Ga0182032_110409232	3300016357	Soil	MRRSIGALVFCLLNIPVHAEDCVASVYTVRDSSQRGTKTASGIPLHDNAM
Ga0182034_100262281	3300016371	Soil	MRRLIVALVFCLLNIPIHAEDCVASVYAVGDSSQPGTKTASGIPHDDNAMTAA
Ga0182034_110084332	3300016371	Soil	MRRLIAALVFCLFNIPIHAEDCVASVYAVGDSSQPGTKTASGIPHDDNAMTAA
Ga0182039_105442153	3300016422	Soil	MRRSIGALVFCLLNIPVHAEDCVASVYTVRDSSQRGTKTASGIPLDDNGMTAAHKSLPFGSKVKV
Ga0182038_100269769	3300016445	Soil	MRRLIVALVFCLLNIPIHAEDCVASVYAVGDSSQPGTKTASGIPHDD
Ga0182038_106438681	3300016445	Soil	MRRLIAALVFLLNSPVRAEDCVASVYAVEDSSQPGTKTASGIPLNDNVMT
Ga0182038_110926661	3300016445	Soil	MRRLIAALVFCLFNIPIHAEDCVASVYAVGDSSQPGTKTASGIPHDDNAM
Ga0182038_113098411	3300016445	Soil	MRRLIAALVLCLLDIPVRAEDCVASVYAVGDSSQRGTKTAS
Ga0190271_117198362	3300018481	Soil	MRSLAALAFICVLTIPARTEECVASVYSIGDSSQPGTKTASGIPLNDNSLTA
Ga0179596_106761261	3300021086	Vadose Zone Soil	MRSFIAASAFCLLAIPGHTEDCIASVYSIGEPSQPGTETASGVPLDNDAMTAAHKSLPFG
Ga0126371_108391431	3300021560	Tropical Forest Soil	MRRLIAALVFCLLNIPVLAEDCVASVYAVGDSSQPGTKTASGIPLDDNAMTAAHKSL
Ga0126371_122657861	3300021560	Tropical Forest Soil	MRRLITALVFCLLHIPVRAEDCVASVYSLGDSSQRGTKTASGTPLDDNVMTAAHKSLP
Ga0126371_125848161	3300021560	Tropical Forest Soil	MRKLVAALLLCLLDIPLRAEDCVASAYAVGDPSQPGTKTASGIP
Ga0207692_101890972	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MRRSIAALVLCLLHIPVRAEDCVASVYSLGDSSQPGTKTASGTPLNDNAMTAAHKSL
Ga0209474_103356271	3300026550	Soil	MRRLIAALLFCLLHIPVRAEDCVASVYSVGERSQPGTKTASGIPLDDNGMTA
Ga0209465_100485656	3300027874	Tropical Forest Soil	MRRLIAALVFCLLNIPVHSEDCVASVYAVGESSQPGTKTASGIPHDDNALTAAHKSLPFG
Ga0307497_107151851	3300031226	Soil	VRSCIAVLLLCLCNGPTRAEDCIASVYSIGDRSQRGTRTASGIPLDDNAMTAA
Ga0318516_103207952	3300031543	Soil	MRRLMAALVFCLLNIPVHAEDCVASVYAVGDSSQPGTKTASGIPHDDNAM
Ga0318541_100306747	3300031545	Soil	MRRLIAALVLCLLDIPVRAEDCVASVYAVGDSSQRGTKTASG
Ga0318515_102037721	3300031572	Soil	MRRLIAALVFCLLSIPVHAEDCVASVYAVGDSSQPGTKTASGIL
Ga0306918_100149421	3300031744	Soil	MRRLIVALVFCLLNIPIHAEDCVASVYAVGDSSQPGTKTASGIPHDDNAMTAAH
Ga0306918_104518691	3300031744	Soil	MRRLIAALVFCLFNIPIHAEDCVASVYAVGDSSQPGTKTASGIPHDDNAMTAAH
Ga0306918_105499031	3300031744	Soil	MRRLIAVLVFCLLNIPVLAEDCVASVYAVGDSSQRGTKTA
Ga0306918_111328912	3300031744	Soil	MRRLIAALVFCLLNIPVHAEDCVASVYAVGDSSQRGTKT
Ga0318492_107782871	3300031748	Soil	MRRLIAALVFCLLNIPVHAEDCVASEYAVGDSSQPGTKTASGIPHDDNAMTAA
Ga0318494_103823072	3300031751	Soil	MRRLIAALVFCLLNIPVNAEDCVASVYAVGDSSQPGTKTASGIPHDDNAMTAAHKSLPF
Ga0318537_100843421	3300031763	Soil	MRQLIAALVLCLLDIPVRAEDCVASVYAVGGSSQPGTKTASGIPLYD
Ga0318554_103281831	3300031765	Soil	MRRLIAALVFCLLNIPVHAEDCVASVYTVGDSSQPGTKTASGIPHDDNAMTAAHKSLPF
Ga0318498_104240102	3300031778	Soil	MRRLIVALVFCLLNIPIHAEDCVASVYAVGDSSQPGTKTASGIPH
Ga0318503_101278692	3300031794	Soil	MRRLMAALAFCLLNIPVHAEDCVASVYAVGDSSQPGTKTASGIPHDD
Ga0318497_104202541	3300031805	Soil	MRQLIAALVLCLLDIPVRAEDCVASVYAVGGSSQPG
Ga0310917_110556612	3300031833	Soil	MRRLIAVLVLCLLDIPVRAEDCVASVYARGDSSQPETKTASGIPLNDNAMTAAHK
Ga0306919_103353082	3300031879	Soil	MRRLIAALVFCLFNIPIHAEDCVASVYAVGDSSQPGTKTASGIPHDD
Ga0306925_101031019	3300031890	Soil	MRRSIGALVFCLLNIPVHAEDCVASVYTVRDSSQRGTKTASGIPLDDNAKTA
Ga0306925_101919581	3300031890	Soil	MRQLIAALVLCLLDIPVRAEDCVASVYAVGGSSQPGTKTASGIPLNDNDMTAAHKSLPFGSK
Ga0306925_102990432	3300031890	Soil	MRRLIAVLVFCLLNIPVLAEDCVASVYAVGDSSQRGTKTASGIPLDDNAMTAAHKSL
Ga0306923_122818951	3300031910	Soil	MRCFIGALVFCLLTLPVRGEDCVASVYFVGEPSQPGTETASGVPLDDDA
Ga0310910_108419561	3300031946	Soil	MRRLIAVLVFCLLNIPVLAEDCVASVYAVGDSSQRGTK
Ga0306926_108732711	3300031954	Soil	MRGLIAALVLCLLNIPVRGEDCIASVYTVGDSSQRGTKTASGISLNDNAMT
Ga0306926_118756161	3300031954	Soil	MRRLIAALVFCLLNIPVHAEDCVASVYAVGDSSQRGTKTASG
Ga0318531_100302641	3300031981	Soil	MRQLIAALVLCLLDIPVRAEDCVASVYAVGGSSQPGTK
Ga0306922_106636681	3300032001	Soil	MRRLIAVLVFCLLNIPVLAEDCVASVYAVGDSSQRGTKTASGIPLDDNAMTA
Ga0318507_102602101	3300032025	Soil	MRRLIAALVFCLFNIPVEAEDCVASVYVVGDSSQRGTKTTSGIPLNDNVMTAAHKS
Ga0318549_103740301	3300032041	Soil	MRRLIAALVLCLLDIPVRAEDCVASVYAVGDSSQRGTKTASGIPINDN
Ga0318575_104690471	3300032055	Soil	MRQLIAALVLCLLDIPVRAEDCVASVYAVGGSSQPGTKTASGIPL
Ga0318510_102070951	3300032064	Soil	MRRLIAALVFCLLNIPVHAEDCVASVYTVGDSSQPGTKTASGIPHDDNAMTAAHKSLP
Ga0306920_1004621191	3300032261	Soil	MRRLMAALAFCLLNIPVHAEDCVASVYAVGDSSQPGTKTASGIPHDDNAMT
Ga0306920_1012260421	3300032261	Soil	MRRLIAALVFCLLNIPVHAEDCVASVYAVGDSSQRG
Ga0306920_1020433121	3300032261	Soil	MRRLIAALVFCLLNIPVHAEDCVASEYAVGDSSQPGTKTASGIPHDDNAMTAAHKSLP
Ga0306920_1037753521	3300032261	Soil	MRRSIAALVFCLLSIPVYAEDCVASVYAVRDSSQPRTKTASGIPH
Ga0310914_113250722	3300033289	Soil	MRRLIAALVLCLLDIPVRAEDCVASVYAVGDSSQRGTKTASGIPIN
Ga0310914_115943301	3300033289	Soil	MRRLIAALVFCLFNIPVEAEDCVASVYVVGDSSQRGTKT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F097683

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences