NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F097666

Metagenome Family F097666

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F097666
Family Type Metagenome
Number of Sequences 104
Average Sequence Length 45 residues
Representative Sequence MSQETSDITTKQGGALATLDFVKDSGMGLENIDKGDLALPFLKLL
Number of Associated Samples 94
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 75.96 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 93.27 %
Associated GOLD sequencing projects 88
AlphaFold2 3D model prediction Yes
3D model pTM-score0.15

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (78.846 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(34.615 % of family members)
Environment Ontology (ENVO) Unclassified
(92.308 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(92.308 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 12.33%    β-sheet: 0.00%    Coil/Unstructured: 87.67%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.15
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF00176SNF2-rel_dom 4.81
PF00271Helicase_C 4.81
PF04851ResIII 0.96



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A78.85 %
All OrganismsrootAll Organisms21.15 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001450|JGI24006J15134_10174642Not Available680Open in IMG/M
3300001589|JGI24005J15628_10130342Not Available794Open in IMG/M
3300001718|JGI24523J20078_1031405Not Available605Open in IMG/M
3300001853|JGI24524J20080_1021129Not Available670Open in IMG/M
3300002231|KVRMV2_100064680All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium2359Open in IMG/M
3300002231|KVRMV2_100082440All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium1158Open in IMG/M
3300002488|JGI25128J35275_1086784All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium639Open in IMG/M
3300002488|JGI25128J35275_1124389Not Available513Open in IMG/M
3300005522|Ga0066861_10198131Not Available689Open in IMG/M
3300005593|Ga0066837_10247275Not Available631Open in IMG/M
3300006190|Ga0075446_10060293Not Available1158Open in IMG/M
3300006190|Ga0075446_10177312Not Available601Open in IMG/M
3300006308|Ga0068470_1838927Not Available744Open in IMG/M
3300006484|Ga0070744_10112992Not Available784Open in IMG/M
3300006789|Ga0098054_1062269Not Available1417Open in IMG/M
3300006802|Ga0070749_10737064Not Available525Open in IMG/M
3300006867|Ga0075476_10052909Not Available1638Open in IMG/M
3300006921|Ga0098060_1186176Not Available569Open in IMG/M
3300006924|Ga0098051_1152062Not Available612Open in IMG/M
3300006925|Ga0098050_1079278Not Available847Open in IMG/M
3300006925|Ga0098050_1080281All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria841Open in IMG/M
3300006926|Ga0098057_1111553Not Available667Open in IMG/M
3300006929|Ga0098036_1168052Not Available669Open in IMG/M
3300006990|Ga0098046_1022198Not Available1598Open in IMG/M
3300007229|Ga0075468_10167486Not Available657Open in IMG/M
3300008216|Ga0114898_1124232Not Available756Open in IMG/M
3300008218|Ga0114904_1062228Not Available954Open in IMG/M
3300008219|Ga0114905_1085602Not Available1108Open in IMG/M
3300008219|Ga0114905_1180089Not Available690Open in IMG/M
3300009002|Ga0102810_1093946Not Available936Open in IMG/M
3300009071|Ga0115566_10187905Not Available1269Open in IMG/M
3300009193|Ga0115551_1320818Not Available674Open in IMG/M
3300009409|Ga0114993_11037361Not Available582Open in IMG/M
3300009413|Ga0114902_1046363Not Available1279Open in IMG/M
3300009414|Ga0114909_1177432Not Available552Open in IMG/M
3300009420|Ga0114994_10962941Not Available552Open in IMG/M
3300009447|Ga0115560_1157496Not Available898Open in IMG/M
3300009467|Ga0115565_10373832Not Available645Open in IMG/M
3300009495|Ga0115571_1194565Not Available832Open in IMG/M
3300009512|Ga0115003_10038834Not Available3064Open in IMG/M
3300009602|Ga0114900_1108369Not Available754Open in IMG/M
3300009605|Ga0114906_1024774Not Available2432Open in IMG/M
3300009605|Ga0114906_1151017Not Available801Open in IMG/M
3300009611|Ga0105229_111130Not Available693Open in IMG/M
3300009619|Ga0105236_1012322Not Available926Open in IMG/M
3300009619|Ga0105236_1023712Not Available726Open in IMG/M
3300009620|Ga0114912_1012963Not Available2514Open in IMG/M
3300009705|Ga0115000_10952633Not Available524Open in IMG/M
3300010148|Ga0098043_1229354Not Available509Open in IMG/M
3300010153|Ga0098059_1231545Not Available715Open in IMG/M
3300011128|Ga0151669_105545All Organisms → Viruses → Predicted Viral1018Open in IMG/M
3300017697|Ga0180120_10213233All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria796Open in IMG/M
3300017708|Ga0181369_1068025Not Available773Open in IMG/M
3300017713|Ga0181391_1152662Not Available510Open in IMG/M
3300017719|Ga0181390_1117305Not Available696Open in IMG/M
3300017720|Ga0181383_1155548Not Available613Open in IMG/M
3300017721|Ga0181373_1044679Not Available809Open in IMG/M
3300017724|Ga0181388_1034905All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1232Open in IMG/M
3300017741|Ga0181421_1161236Not Available579Open in IMG/M
3300017752|Ga0181400_1110727Not Available800Open in IMG/M
3300017756|Ga0181382_1131141Not Available663Open in IMG/M
3300017757|Ga0181420_1151101Not Available692Open in IMG/M
3300017759|Ga0181414_1079702All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria866Open in IMG/M
3300017762|Ga0181422_1146278Not Available726Open in IMG/M
3300017765|Ga0181413_1099803All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria884Open in IMG/M
3300017767|Ga0181406_1253604Not Available516Open in IMG/M
3300017768|Ga0187220_1013557All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2456Open in IMG/M
3300017781|Ga0181423_1154570All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria883Open in IMG/M
3300020312|Ga0211542_1091959Not Available525Open in IMG/M
3300020358|Ga0211689_1085893All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria897Open in IMG/M
3300020365|Ga0211506_1037544All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1378Open in IMG/M
3300020413|Ga0211516_10138275All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1143Open in IMG/M
3300020436|Ga0211708_10096542Not Available1155Open in IMG/M
3300020437|Ga0211539_10450757Not Available536Open in IMG/M
3300020595|Ga0206126_10253630Not Available804Open in IMG/M
3300021791|Ga0226832_10024025Not Available2011Open in IMG/M
3300021791|Ga0226832_10149881Not Available885Open in IMG/M
(restricted) 3300024518|Ga0255048_10127030Not Available1255Open in IMG/M
3300025049|Ga0207898_1046862Not Available534Open in IMG/M
3300025069|Ga0207887_1057561Not Available634Open in IMG/M
3300025084|Ga0208298_1098047Not Available533Open in IMG/M
3300025127|Ga0209348_1057567All Organisms → Viruses1290Open in IMG/M
3300025133|Ga0208299_1125465Not Available835Open in IMG/M
3300025137|Ga0209336_10101204Not Available814Open in IMG/M
3300025138|Ga0209634_1184198Not Available815Open in IMG/M
3300025138|Ga0209634_1327194Not Available515Open in IMG/M
3300025141|Ga0209756_1343163Not Available511Open in IMG/M
3300025257|Ga0207899_1027978All Organisms → Viruses994Open in IMG/M
3300025270|Ga0208813_1111183Not Available537Open in IMG/M
3300025277|Ga0208180_1102697Not Available633Open in IMG/M
3300025286|Ga0208315_1098693Not Available696Open in IMG/M
3300025590|Ga0209195_1075660Not Available787Open in IMG/M
3300025632|Ga0209194_1034141All Organisms → Viruses1580Open in IMG/M
3300025632|Ga0209194_1143935Not Available566Open in IMG/M
3300025769|Ga0208767_1074799All Organisms → Viruses1450Open in IMG/M
3300025869|Ga0209308_10081577All Organisms → Viruses1611Open in IMG/M
3300027791|Ga0209830_10084680All Organisms → Viruses1600Open in IMG/M
3300027801|Ga0209091_10436972Not Available584Open in IMG/M
3300027813|Ga0209090_10579867Not Available510Open in IMG/M
3300028018|Ga0256381_1051495Not Available631Open in IMG/M
3300028125|Ga0256368_1000519All Organisms → Viruses3938Open in IMG/M
3300029792|Ga0183826_1030511All Organisms → Viruses851Open in IMG/M
3300032006|Ga0310344_11713815Not Available507Open in IMG/M
3300032032|Ga0315327_10697033Not Available622Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine34.62%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean13.46%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater13.46%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine8.65%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine8.65%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous3.85%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic2.88%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater1.92%
Hydrothermal Vent FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids1.92%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment1.92%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.96%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine0.96%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.96%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.96%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.96%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine0.96%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater0.96%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine0.96%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine0.96%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001589Marine viral communities from the Pacific Ocean - LP-40EnvironmentalOpen in IMG/M
3300001718Marine viral communities from the Pacific Ocean - LP-48EnvironmentalOpen in IMG/M
3300001853Marine viral communities from the Subarctic Pacific Ocean - LP-49EnvironmentalOpen in IMG/M
3300002231Marine sediment microbial communities from Santorini caldera mats, Greece - red matEnvironmentalOpen in IMG/M
3300002488Marine viral communities from the Pacific Ocean - ETNP_2_60EnvironmentalOpen in IMG/M
3300005522Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV257EnvironmentalOpen in IMG/M
3300005593Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV86EnvironmentalOpen in IMG/M
3300006190Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNAEnvironmentalOpen in IMG/M
3300006308Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500mEnvironmentalOpen in IMG/M
3300006484Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535EnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006867Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300006924Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaGEnvironmentalOpen in IMG/M
3300006925Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaGEnvironmentalOpen in IMG/M
3300006926Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300006990Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaGEnvironmentalOpen in IMG/M
3300007229Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008218Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6EnvironmentalOpen in IMG/M
3300008219Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05EnvironmentalOpen in IMG/M
3300009002Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.573EnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009193Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321EnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009413Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12EnvironmentalOpen in IMG/M
3300009414Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009447Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509EnvironmentalOpen in IMG/M
3300009467Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530EnvironmentalOpen in IMG/M
3300009495Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531EnvironmentalOpen in IMG/M
3300009512Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88EnvironmentalOpen in IMG/M
3300009602Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231EnvironmentalOpen in IMG/M
3300009605Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9EnvironmentalOpen in IMG/M
3300009611Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3747_4435EnvironmentalOpen in IMG/M
3300009619Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250EnvironmentalOpen in IMG/M
3300009620Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51EnvironmentalOpen in IMG/M
3300009705Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128EnvironmentalOpen in IMG/M
3300010148Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaGEnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300011128Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_2, 0.02EnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017708Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaGEnvironmentalOpen in IMG/M
3300017713Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11EnvironmentalOpen in IMG/M
3300017719Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21EnvironmentalOpen in IMG/M
3300017720Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23EnvironmentalOpen in IMG/M
3300017721Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaGEnvironmentalOpen in IMG/M
3300017724Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17EnvironmentalOpen in IMG/M
3300017741Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19EnvironmentalOpen in IMG/M
3300017752Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22EnvironmentalOpen in IMG/M
3300017756Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22EnvironmentalOpen in IMG/M
3300017757Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22EnvironmentalOpen in IMG/M
3300017759Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28EnvironmentalOpen in IMG/M
3300017762Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18EnvironmentalOpen in IMG/M
3300017765Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28EnvironmentalOpen in IMG/M
3300017767Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20EnvironmentalOpen in IMG/M
3300017768Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)EnvironmentalOpen in IMG/M
3300017781Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14EnvironmentalOpen in IMG/M
3300020312Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX556125-ERR598977)EnvironmentalOpen in IMG/M
3300020358Marine microbial communities from Tara Oceans - TARA_B100000768 (ERX555925-ERR599009)EnvironmentalOpen in IMG/M
3300020365Marine microbial communities from Tara Oceans - TARA_B100000034 (ERX555943-ERR599143)EnvironmentalOpen in IMG/M
3300020413Marine microbial communities from Tara Oceans - TARA_S200000501 (ERX555962-ERR599092)EnvironmentalOpen in IMG/M
3300020436Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)EnvironmentalOpen in IMG/M
3300020437Marine microbial communities from Tara Oceans - TARA_B100000282 (ERX555906-ERR599074)EnvironmentalOpen in IMG/M
3300020595Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1EnvironmentalOpen in IMG/M
3300021791Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmerEnvironmentalOpen in IMG/M
3300024518 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2EnvironmentalOpen in IMG/M
3300025049Marine viral communities from the Pacific Ocean - LP-55 (SPAdes)EnvironmentalOpen in IMG/M
3300025069Marine viral communities from the Pacific Ocean - LP-38 (SPAdes)EnvironmentalOpen in IMG/M
3300025084Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025127Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025133Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025137Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025257Marine viral communities from the Deep Pacific Ocean - MSP-134 (SPAdes)EnvironmentalOpen in IMG/M
3300025270Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904 (SPAdes)EnvironmentalOpen in IMG/M
3300025277Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16 (SPAdes)EnvironmentalOpen in IMG/M
3300025286Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215 (SPAdes)EnvironmentalOpen in IMG/M
3300025590Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420 (SPAdes)EnvironmentalOpen in IMG/M
3300025632Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025869Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)EnvironmentalOpen in IMG/M
3300027791Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)EnvironmentalOpen in IMG/M
3300027801Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)EnvironmentalOpen in IMG/M
3300027813Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)EnvironmentalOpen in IMG/M
3300028018Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 1600mEnvironmentalOpen in IMG/M
3300028125Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SBEnvironmentalOpen in IMG/M
3300029792Marine giant viral communities collected during Tara Oceans survey from station TARA_041 - TARA_Y100000052EnvironmentalOpen in IMG/M
3300032006Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MGEnvironmentalOpen in IMG/M
3300032032Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI24006J15134_1017464213300001450MarineMSEETRDVAKKEGGALATLDFVADSGMGLENIDKGDLALP
JGI24005J15628_1013034233300001589MarineMTQETSDIATKQGGAVATLDFVQDSGMGLENIDKGDLALPFLKLLQ
JGI24523J20078_103140523300001718MarineMSEEARNVTAKKSGSLATLDFVADSGMGLENIDKSDLAL
JGI24524J20080_102112923300001853MarineMNEETRDVAKQEGGSLATLDFVADSGMGLENVDKQDLALPF
KVRMV2_10006468013300002231Marine SedimentMSEETGNITTKQSGAVATLDFVSDSGMGLENVDKEDLALPFLKLLQSGSDETK
KVRMV2_10008244013300002231Marine SedimentMTQETSDITTKQGGAVATLDFVQDSGMGLXNIDKGDLALPFLKLLQS
JGI25128J35275_108678423300002488MarineMSEEARDVVKKEGGQVATLDFVKDSGMGLENIDKEDLALPFLKL
JGI25128J35275_112438923300002488MarineMNEETRDVAKQESGSLATLDFVSDSGMGLENVDKQDLALP
Ga0066861_1019813123300005522MarineMTQETSDIVKKQGGALATLDFVQDSGMGLENIDKGDLALPFLKLLQSGSD
Ga0066837_1024727513300005593MarineMSQETSDIINKQGGALATLDFVKDSGMGLENIDKGDLALPFLKLLQSGSD
Ga0075446_1006029333300006190MarineMSEETSNITTKQSGAIATLDFVADSGMGLETIEKNDLALPFLKLLQSGSDET
Ga0075446_1017731213300006190MarineMSEEARDVTAKKSGSLATLDFVADSGMGLENIDKSDLALPFLK
Ga0068470_183892723300006308MarineMSQETSDLTTKQGGALATLDFVKDSGMGLENIDKGDLALPFLKLLQSGS
Ga0070744_1011299233300006484EstuarineMSEETRDVTKQESGSLATLDFVADSGMGLENVDKGDL
Ga0098054_106226953300006789MarineMSQETSDLTTKQGGALATLDFVKDSGMGLENIDKS
Ga0070749_1073706423300006802AqueousMTQETSDLTVKKEGAIMTLDFEADSGMGLENIEKDDLAL
Ga0075476_1005290913300006867AqueousMNEETRDVAKQEGGSLATLDFVSDSGMGLENVDKQDLALP
Ga0098060_118617613300006921MarineMSQETSDIVNKQGGALATLDFVKDSGMGLENIDKGDLALPFLKLLQS
Ga0098051_115206223300006924MarineMSQETSDIVNKKDNALATLDFVKDSGMGLENIDKGDLALPFLKLLQSGS
Ga0098050_107927833300006925MarineMSQETSDIVNKKDNALATLDFVKDSGMGLENIDKGDLALPFLKLLQSGSD
Ga0098050_108028113300006925MarineMSQETSDLTTKQGGALATLDFVKDSGMGLENIDKGDLALPFLKLLQSGSDETKKKH
Ga0098057_111155323300006926MarineMSQETSDIVKKQGGALATLDFVKDSGMGLENIDKADLALPFLKLLQT
Ga0098036_116805223300006929MarineMSEETRDIIKRSTGELSALDFVSDSGMGLENVDKQDLALPFLKLLQS
Ga0098046_102219813300006990MarineMSQETSDIVNKQGGALATLDFVKDSGMGLENIDKGDLAL
Ga0075468_1016748613300007229AqueousMSEETRDVIKRSTGELSALDFVSDSGMGLENVDKQDLALPFLKLLQSGSDETKKK
Ga0114898_112423223300008216Deep OceanMSQETSDLTTKQGGALATLDFVKDSGMGLENIDKGDLALPFLKLLQSGSDET
Ga0114904_106222833300008218Deep OceanMSQETSDITTKQGGALATLDFVKDSGMGLENIDKGDLALPFLKLLQSGSDE
Ga0114905_108560233300008219Deep OceanMSEETGNITTKQSGAVATLDFVSDSGMGLENVDKQDLALPFLKLLQSGSDETK
Ga0114905_118008923300008219Deep OceanMNEETRDVAKQEGGALATLDFVSDSGMGLENVDKQDLALPFLKLLQSG
Ga0102810_109394633300009002EstuarineMSEETRDVTTKKDGALATLDFVADSGMGLENIDKSDLA
Ga0115566_1018790513300009071Pelagic MarineMSEETRDVTKQESGSLATLDFVSDSGMGLENVDKQDLALPFLKLLQSGS
Ga0115551_132081823300009193Pelagic MarineMNEETRDVATKQESGSLATLDFVSDSGMGLENVDKQDLALP
Ga0114993_1103736123300009409MarineMSQETSDIVNKKDNALATLDFVKDSGMGLENIDKGDLALPFLKL
Ga0114902_104636313300009413Deep OceanMSQETSDLTTKQGGALATLDFVKDSGMGLENIDKGDLALP
Ga0114909_117743213300009414Deep OceanTQETSDVTTKQGGAVATLDFVQDSGMGLENIDKGDLALPF*
Ga0114994_1096294113300009420MarineMSEETRDVTNKQGGALATLDFVADSGMGLENIDKSDLALPFLKLLQ
Ga0115560_115749633300009447Pelagic MarineMSEETRDVTKQESGSLATLDFVADSGMGLENVDKGDLALPFLK
Ga0115565_1037383223300009467Pelagic MarineMSEETRDVTKQESGSLATLDFVSDSGMGLENVDKQDLAL
Ga0115571_119456513300009495Pelagic MarineMTQETSDLTVKKEGAIATLDFEADSGRGLENIEKDDLALP
Ga0115003_1003883463300009512MarineMSEEARNVTAKKSGSLATLDFVADSGMGLENIDKSD
Ga0114900_110836923300009602Deep OceanMTQETSDVTTKQGGAVATLDFVQDSGMGLENIDKGDLALPFLKLLQSGSDE
Ga0114906_102477443300009605Deep OceanMSEETGNITTKQSGAVATLDFVSDSGMGLENVDKQDLALPFLKLLQSGSDETKK
Ga0114906_115101713300009605Deep OceanMSQETSDITTKQGGALATLDFVKDSGMGLENIDKGDLALPFLKLL
Ga0105229_11113023300009611Marine OceanicMTQETSDVMTKQGGAVATLDFVQDSGMGLENIDKGDLALPFLKLLQSGSDETKKK
Ga0105236_101232233300009619Marine OceanicMSQETSDLTTKQGGALATLDFVKDSGMGLENIDKGDLALPFLKLLQ
Ga0105236_102371223300009619Marine OceanicMTQETSDVATRQGGAVATLDFVQDSGMGLENIDKGDLALPFLKLLQSGSD
Ga0114912_101296343300009620Deep OceanMNEETRDVAKQEGGSLATLDFVSDSGMGLENVDKQDLALPFL
Ga0115000_1095263313300009705MarineMKQETSEMVKKESGALATLDFVADSGMGLENIEKSDLDLPFLKLLQSGS
Ga0098043_122935413300010148MarineMSEETRDVAKKQGGALATLDFVADSGMGLDNIDKGDLALP
Ga0098059_123154513300010153MarineMSQETSDITTKQGGALATLDFVKDSGMGLENIDKGDLAL
Ga0151669_10554513300011128MarineMSQETGDLTKKQGGALATLDFVSDSGMGLENIDK*
Ga0180120_1021323313300017697Freshwater To Marine Saline GradientQKSQGANNMSQETGDLTTKQGGALATLDFVPDSGMGLENIDKPDLALPFLKPLQSGSDET
Ga0181369_106802523300017708MarineMSEETGNVTTKQSGAIAKLDFVADSGMGLENMDKGDLALPFLKLLQSGSDE
Ga0181391_115266223300017713SeawaterMNEETRDVAKQEGGSLATLDFVSDSGMGLENVDKQDLALPFLKLLQSGSD
Ga0181390_111730523300017719SeawaterMTQETSDITTKQGGAVATLDFVQDSGMGLENIDKGDLALPFLK
Ga0181383_115554823300017720SeawaterMSEEARNVTNKQGGALATLDFVADSGMGLENIDKSDLALPFLKLLQSGSD
Ga0181373_104467913300017721MarineMSQETGDLTKKTGGQVATLDFVSDSGMGLENIDRDDLALPFLKLLQSGSD
Ga0181388_103490543300017724SeawaterMNEETRDVAKQEGGALATLDFVSDSGMGLENVDKQDLALPFLKLLQ
Ga0181421_116123623300017741SeawaterMNEETRDVAKQEGGSLATLDFVSDSGMGLENVDKQDL
Ga0181400_111072733300017752SeawaterMSEETRDVTKQESGSLATLDFVADSGMGLENVDKGDLALPFLKLLQSGSDETK
Ga0181382_113114123300017756SeawaterMSEETRNVANKQGGALATLDFVADSGMGLENIDKGDLALPFLKLLQS
Ga0181420_115110113300017757SeawaterMSEEARNVTKKQGGALATLDFVADSGMGLENIDKSDLALPFLKLLQSGSDE
Ga0181414_107970233300017759SeawaterMTQETSDIATKQGGALATLDFVQDSGMGLENIDKGDLALPFLK
Ga0181422_114627823300017762SeawaterMSEEARNVTNKKSGALATLDFVADSGMGLENIDKSDLALPFL
Ga0181413_109980313300017765SeawaterMSEETRDVTTKQGGAVATLDFVKDSGMGLENVDKGDLALPFLKLLQSGSD
Ga0181406_125360423300017767SeawaterMSEETRDVANKQGGALATLDFVADSGMGLENIDKGD
Ga0187220_101355743300017768SeawaterMSQETSDLTVKKEGAIATLDFEADSGRGLENIEKD
Ga0181423_115457033300017781SeawaterMSEEARNVTKKQGGALATLDFVADSGMGLENIDKTDLALPFLKLLQSGSD
Ga0211542_109195923300020312MarineMSEETRDIIKRSTGELSALDFVSDSGMGLENVDKQDLALPFLKLLQSGSDETKKK
Ga0211689_108589333300020358MarineMSEETRDVTKQEGGSLATLDFVADSGMGLENVDKGDLALPFLKL
Ga0211506_103754413300020365MarineMSEETRDIIKRSTGELSALDFVSDSGMGLENVDKQDLA
Ga0211516_1013827513300020413MarineMSEETRDIIKRSTGELSALDFVSDSGMGLENVDKEDLALPFLK
Ga0211708_1009654213300020436MarineMSEETRDVAKKQGGAVATIDFVQDSGMGLENIDRDDLA
Ga0211539_1045075723300020437MarineMSEETRDIIKRSTGELSALDFVSDSGMGLENVDKQDLALPFLKLLQSGSDETK
Ga0206126_1025363013300020595SeawaterMNEETRDVATKQESGSLATLDFVSDSGMGLENVDKQDLA
Ga0226832_1002402543300021791Hydrothermal Vent FluidsMSQETSDLTTKQGGALATLDFVKDSGMGLENIDKGDLALPFLKLLQSGSDETKK
Ga0226832_1014988133300021791Hydrothermal Vent FluidsMTQETSDIATRQGGAVATLDFVQDSGMGLENIDKGDLALPFLK
(restricted) Ga0255048_1012703013300024518SeawaterMTQETSDIATKQGGAVATLDFVQDSGMGLENIDKGDLALPFLKLL
Ga0207898_104686223300025049MarineMTQETSDIATKQGGAVATLDFVQDSGMGLENIDKGD
Ga0207887_105756113300025069MarineMKQATSDIVKKESGALATLDFVKDSGMGLENIDKGDR
Ga0208298_109804713300025084MarineMTQETSDIVKKQGGALATLDFVQDSGMGLENIDKGDLALP
Ga0209348_105756713300025127MarineMNEETRDVANKQGGALATIDFVSDSGMGLETIEKTDLALPFLKLLQS
Ga0208299_112546533300025133MarineMSQETSDLTTKQGGALATLDFVKDSGMGLENIDKGDLALPFLKLLQSGSDETK
Ga0209336_1010120433300025137MarineMSEETSNITTKQDGALTTLDFVSDAGMGLETIEKNDLALPFLKLLQSGSDETKKK
Ga0209634_118419823300025138MarineMTQETSDKKQEAGNLVTKQGGALATLDFVQDSGMGLENIDREHRSLPFLKLLQSGSYETKKKHAKYV
Ga0209634_132719413300025138MarineMNEETRDVAKQEGGSLATLDFVSDSGMGLENVDKQDLALPFLKLLQSGSDETKK
Ga0209756_134316313300025141MarineMSQETGDLTTKQGGALATLDFVSDSGMGLENIDKSDLALPFLKLLQSGSDETKKKH
Ga0207899_102797813300025257Deep OceanMTQETSDIATKQGGALATLDFVQDSGMGLENIDKGDL
Ga0208813_111118323300025270Deep OceanMTQETSDVATRQGGAVATLDFVQDSGMGLENIDKGD
Ga0208180_110269723300025277Deep OceanMTQETSDVATRQGGAVATLDFVQDSGMGLENIDKGDLALPFLKLLQSGSDET
Ga0208315_109869313300025286Deep OceanMSEETRDIIKRSTGELSALDFVSDSGMGLENVDKEDLALPFLKLLQ
Ga0209195_107566023300025590Pelagic MarineMSEETRDVTKQESGSLATLDFVADSGMGLENVDKGDLALPFLKLLQSGSDET
Ga0209194_103414143300025632Pelagic MarineMSEETRDVANKQGGALATLDFVADSGMGLENIDKGDLA
Ga0209194_114393513300025632Pelagic MarineMTQETSDLTVKKEGAIATLDFEADSGRGLENIEKDDL
Ga0208767_107479943300025769AqueousMSEETRDVANKQGGALATLDFVADSGMGLENIDKGDLALPFLKL
Ga0209308_1008157713300025869Pelagic MarineMSEETRDVTKQESGSLATLDFVADSGMGLENVDKGDLALPF
Ga0209830_1008468043300027791MarineMTQETSDLTVKKEGALATLDFEAHAGKGLENIDKSDLAL
Ga0209091_1043697223300027801MarineMSEEARNVTAKKSGSLATLDFVADSGMGLENIDKSDLALPF
Ga0209090_1057986723300027813MarineMSEETRDVTEKKSGALATLDFVADSGMGLENIDKSDLAL
Ga0256381_105149513300028018SeawaterMSEETRDIIKRSTGELSALDFVSDSGMGLENVDKED
Ga0256368_100051973300028125Sea-Ice BrineMTQETSDLTVKKEGALTTLNFEADSGMGLENIDKGDLALPFLKLLQSD
Ga0183826_103051133300029792MarineMSQETGDLTKKTGGQVATLDFVSDSGMGLENIDRDDLALPFLK
Ga0310344_1171381523300032006SeawaterMSEETRDVAKKQGGALATLDFVADSGMGLDNIDKADL
Ga0315327_1069703313300032032SeawaterMSQETSDITTKQGGALATLDFVKDSGMGLENIDKGDLALPFLKLLQSGSDET


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