NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F097534

Metagenome / Metatranscriptome Family F097534

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F097534
Family Type Metagenome / Metatranscriptome
Number of Sequences 104
Average Sequence Length 47 residues
Representative Sequence TYIVDVQPDPKSAQYPVKNFPILAKLLADRYQPVAKTAEGVIYRMR
Number of Associated Samples 94
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.96 %
% of genes near scaffold ends (potentially truncated) 96.15 %
% of genes from short scaffolds (< 2000 bps) 96.15 %
Associated GOLD sequencing projects 88
AlphaFold2 3D model prediction Yes
3D model pTM-score0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (95.192 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(29.808 % of family members)
Environment Ontology (ENVO) Unclassified
(48.077 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(47.115 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 17.57%    β-sheet: 22.97%    Coil/Unstructured: 59.46%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.50
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF13231PMT_2 17.31
PF04055Radical_SAM 10.58
PF00534Glycos_transf_1 8.65
PF10131PTPS_related 4.81
PF01370Epimerase 4.81
PF14534DUF4440 3.85
PF03544TonB_C 1.92
PF01066CDP-OH_P_transf 1.92
PF01427Peptidase_M15 1.92
PF07883Cupin_2 0.96
PF13692Glyco_trans_1_4 0.96
PF08734GYD 0.96
PF13518HTH_28 0.96
PF12867DinB_2 0.96
PF00005ABC_tran 0.96
PF13328HD_4 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG0558Phosphatidylglycerophosphate synthaseLipid transport and metabolism [I] 1.92
COG0810Periplasmic protein TonB, links inner and outer membranesCell wall/membrane/envelope biogenesis [M] 1.92
COG1183Phosphatidylserine synthaseLipid transport and metabolism [I] 1.92
COG2173D-alanyl-D-alanine dipeptidaseCell wall/membrane/envelope biogenesis [M] 1.92
COG5050sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferasesLipid transport and metabolism [I] 1.92
COG4274Uncharacterized conserved protein, contains GYD domainFunction unknown [S] 0.96

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.19 %
UnclassifiedrootN/A4.81 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459005|F1BAP7Q01EF0MRAll Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia537Open in IMG/M
3300000559|F14TC_100422006All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium555Open in IMG/M
3300000955|JGI1027J12803_100659658All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium624Open in IMG/M
3300000956|JGI10216J12902_115252527Not Available871Open in IMG/M
3300002128|JGI24036J26619_10036447All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium943Open in IMG/M
3300005178|Ga0066688_10094072All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1820Open in IMG/M
3300005179|Ga0066684_10553562All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium771Open in IMG/M
3300005187|Ga0066675_10141214All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1643Open in IMG/M
3300005335|Ga0070666_10613028All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium795Open in IMG/M
3300005436|Ga0070713_101863581All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium583Open in IMG/M
3300005466|Ga0070685_10389202All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium963Open in IMG/M
3300005548|Ga0070665_101829119All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia614Open in IMG/M
3300005575|Ga0066702_10492932All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia747Open in IMG/M
3300005586|Ga0066691_10931796All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium511Open in IMG/M
3300006237|Ga0097621_102103739All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300009098|Ga0105245_10081262All Organisms → cellular organisms → Bacteria2962Open in IMG/M
3300009101|Ga0105247_11481701All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium552Open in IMG/M
3300009168|Ga0105104_10510540All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium677Open in IMG/M
3300010046|Ga0126384_10546685All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1006Open in IMG/M
3300010320|Ga0134109_10057154All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1301Open in IMG/M
3300010361|Ga0126378_10641661All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1175Open in IMG/M
3300010376|Ga0126381_103801264All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300010396|Ga0134126_11043983All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium914Open in IMG/M
3300010396|Ga0134126_12460308All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium566Open in IMG/M
3300011269|Ga0137392_11369785All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia566Open in IMG/M
3300011270|Ga0137391_11073711All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium653Open in IMG/M
3300011271|Ga0137393_11139552All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium663Open in IMG/M
3300011271|Ga0137393_11237462All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium633Open in IMG/M
3300012189|Ga0137388_11603014All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium586Open in IMG/M
3300012199|Ga0137383_10571872All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium827Open in IMG/M
3300012205|Ga0137362_10312177All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1361Open in IMG/M
3300012206|Ga0137380_10675022All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium899Open in IMG/M
3300012208|Ga0137376_10656266All Organisms → cellular organisms → Bacteria906Open in IMG/M
3300012209|Ga0137379_11638555All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium541Open in IMG/M
3300012210|Ga0137378_11292435All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300012349|Ga0137387_10687257All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium741Open in IMG/M
3300012350|Ga0137372_10847363All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium653Open in IMG/M
3300012354|Ga0137366_10000305All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae30422Open in IMG/M
3300012355|Ga0137369_10300135All Organisms → cellular organisms → Bacteria1192Open in IMG/M
3300012357|Ga0137384_10328655All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1269Open in IMG/M
3300012357|Ga0137384_10405019All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1126Open in IMG/M
3300012362|Ga0137361_10108026All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2432Open in IMG/M
3300012582|Ga0137358_10969629All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium552Open in IMG/M
3300012914|Ga0157297_10040943All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1166Open in IMG/M
3300012915|Ga0157302_10035589All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1339Open in IMG/M
3300012922|Ga0137394_11377797All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium566Open in IMG/M
3300012923|Ga0137359_10951895All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia738Open in IMG/M
3300012925|Ga0137419_10841074All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia753Open in IMG/M
3300012925|Ga0137419_11955470All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium504Open in IMG/M
3300012929|Ga0137404_11307302All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium668Open in IMG/M
3300012955|Ga0164298_10589358All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium761Open in IMG/M
3300012971|Ga0126369_11597281All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia742Open in IMG/M
3300012975|Ga0134110_10045200All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1732Open in IMG/M
3300012985|Ga0164308_10706639All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium870Open in IMG/M
3300012986|Ga0164304_11695431All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium528Open in IMG/M
3300013100|Ga0157373_10757337All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium714Open in IMG/M
3300013102|Ga0157371_10255405All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1263Open in IMG/M
3300013296|Ga0157374_10847749All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia931Open in IMG/M
3300014745|Ga0157377_10149009All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1445Open in IMG/M
3300015051|Ga0137414_1000659All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1591Open in IMG/M
3300015051|Ga0137414_1000660All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium934Open in IMG/M
3300015051|Ga0137414_1147055All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1594Open in IMG/M
3300015241|Ga0137418_10683701All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300015356|Ga0134073_10156581All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium725Open in IMG/M
3300015356|Ga0134073_10358650All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia538Open in IMG/M
3300015359|Ga0134085_10152369All Organisms → cellular organisms → Bacteria981Open in IMG/M
3300015371|Ga0132258_11148275All Organisms → cellular organisms → Bacteria1964Open in IMG/M
3300015374|Ga0132255_103365508All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia681Open in IMG/M
3300016357|Ga0182032_10497011Not Available1002Open in IMG/M
3300016445|Ga0182038_11376318All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia632Open in IMG/M
3300018054|Ga0184621_10052477All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1365Open in IMG/M
3300018061|Ga0184619_10358237All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium665Open in IMG/M
3300018468|Ga0066662_12764938All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium520Open in IMG/M
3300018482|Ga0066669_10192443All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1552Open in IMG/M
3300018482|Ga0066669_11441082All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium624Open in IMG/M
3300019867|Ga0193704_1085351All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia572Open in IMG/M
3300019886|Ga0193727_1147165All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium645Open in IMG/M
3300020006|Ga0193735_1111176All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia754Open in IMG/M
3300021560|Ga0126371_13677694All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium517Open in IMG/M
3300021953|Ga0213880_10011901All Organisms → cellular organisms → Bacteria1797Open in IMG/M
3300024288|Ga0179589_10638945All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium500Open in IMG/M
3300025927|Ga0207687_11265628All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium634Open in IMG/M
3300025940|Ga0207691_11184412All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium634Open in IMG/M
3300026078|Ga0207702_10302882All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1517Open in IMG/M
3300026142|Ga0207698_11166968All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium784Open in IMG/M
3300026295|Ga0209234_1270005All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium549Open in IMG/M
3300026301|Ga0209238_1109888All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium924Open in IMG/M
3300026310|Ga0209239_1117770All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1105Open in IMG/M
3300026330|Ga0209473_1255435All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia601Open in IMG/M
3300026498|Ga0257156_1080639All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia675Open in IMG/M
3300026547|Ga0209156_10118283All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1302Open in IMG/M
3300026552|Ga0209577_10063644All Organisms → cellular organisms → Bacteria3076Open in IMG/M
3300026557|Ga0179587_10344622All Organisms → cellular organisms → Bacteria965Open in IMG/M
3300026557|Ga0179587_10673361All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia681Open in IMG/M
3300027050|Ga0209325_1006955Not Available1218Open in IMG/M
3300030855|Ga0075374_11068564All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium506Open in IMG/M
3300031122|Ga0170822_14358759All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium793Open in IMG/M
3300031719|Ga0306917_10503330Not Available951Open in IMG/M
3300031946|Ga0310910_11061245All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium632Open in IMG/M
3300031947|Ga0310909_10829930Not Available762Open in IMG/M
3300031996|Ga0308176_11184835All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium810Open in IMG/M
3300032174|Ga0307470_10385640All Organisms → cellular organisms → Bacteria985Open in IMG/M
3300032205|Ga0307472_100212242All Organisms → cellular organisms → Bacteria1483Open in IMG/M
3300032205|Ga0307472_100841089All Organisms → cellular organisms → Bacteria843Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil29.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil9.62%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.69%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.77%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.81%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil4.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.88%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.88%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.92%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.92%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.92%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.92%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.92%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.96%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.96%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.96%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.96%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.96%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.96%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.96%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.96%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock0.96%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.96%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459005Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cmEnvironmentalOpen in IMG/M
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002128Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012914Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2EnvironmentalOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015051Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019867Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1EnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300021953Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026498Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-AEnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027050Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300030855Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 Emin (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031122Oak Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E41_029175802170459005Grass SoilRLAPTYIVDVHPDPKSAQYPVKNFPILAKLLAERYQPVAQTAE
F14TC_10042200623300000559SoilKHPPTYIVDVQADPNMAQYPVKNFPILANLLKERYQPVARTAEGMIYRMR*
JGI1027J12803_10065965833300000955SoilFARHPPTYIVDVQSDPKSAQYPVKNFPILAKLLAGRYQPVAHTTEGVIYQMR*
JGI10216J12902_11525252723300000956SoilLERDFARHPPTYIVDVHADPKTAEYPVGDFPILAKLLKERYQLVARTSEGVIYRMH*
JGI24036J26619_1003644713300002128Corn, Switchgrass And Miscanthus RhizosphereHPPTYIVDVHPDPRSAYYPVKDFPILAKLLTDRYQPVARTGEGVIYRMR*
Ga0066688_1009407213300005178SoilNYIVDVRPDPKSAYYPVKDFPILAKFLAERYQPEVQVAEGVIYRMR*
Ga0066684_1055356223300005179SoilILPGAWSNLQRDFAMHPPAYIVDVHPGPRTAAYPVKNFPILAKFLTERYQPVARTGESVIYGMR*
Ga0066675_1014121413300005187SoilYIVDVQSDSRTLQYPVKNFPILDTLLKERYQPVARTAEGTIYRMR*
Ga0070666_1061302813300005335Switchgrass RhizosphereDFTRHPPTYIVDVHPDPRSAYYPVKDFPILAKLLTDRYQPVARTGEGVIYRMR*
Ga0070713_10186358123300005436Corn, Switchgrass And Miscanthus RhizosphereYIVDVQPDPKSAQNPVKNFPILAKLLAERYQPMAHSAEGKQ*
Ga0070685_1038920223300005466Switchgrass RhizosphereSTLEQDFTRHPPTYIVDVQPDPKSAQYPVKNFPILAKLLADRYQPVAKTAEGVIYRMR*
Ga0070665_10182911923300005548Switchgrass RhizosphereSSLEQDFTTHPPTYIVDVQPDPRSAHYPVKDFPILAKLLTERYQPVAHTAEGVIYRMR*
Ga0066702_1049293223300005575SoilSTLEQDFARHPPTYIVDVQPDPKTAQYPVKNFPILAKLLAEQYQPVAHTAEGVIYRMR*
Ga0066691_1093179623300005586SoilHPDPKSAYYPVKNFPILAKLLADRYQPVAQTAEGVIYRMR*
Ga0097621_10210373923300006237Miscanthus RhizosphereFTRHPPTYIVDVQPDPKSAQYPVKNFPILAKLLADRYQPVAKTAEGVIYRMR*
Ga0105245_1008126233300009098Miscanthus RhizosphereQDFTRHPPTYIVDVQPDPKSAQYPVQNFPILANLLADRYQPVAKTAEGVIYRMR*
Ga0105247_1148170113300009101Switchgrass RhizosphereRTLQYPAKNFPILTKLLKERYQPVARTAEGVIYRMR*
Ga0105104_1051054023300009168Freshwater SedimentWSTLERDFARHPPTYIVDVQSDPRTAQYTVKDFPILARLLKERYQPVARTAEGMIYRMR*
Ga0126384_1054668523300010046Tropical Forest SoilPSNAEYPVKDFPILAKLLAEKYQPVAHTSEGVIYRLR*
Ga0134109_1005715423300010320Grasslands SoilWSTLQRDFARHPPAYIVDVQPDPKSAQYPVKNFPILAEILTERYQPVAQTAEGVIYRMR*
Ga0126378_1064166113300010361Tropical Forest SoilPPAYIVDVDADPTAQYPVKDFPILANLLRQQYQIVARTAEGAIYCLH*
Ga0126381_10380126423300010376Tropical Forest SoilHPPAYIVDLEADPSTAENPVKDYPILAKLLKERYQPVARTPEGVIYRAR*
Ga0134126_1104398323300010396Terrestrial SoilFARHPPTYIVDVQPDPQSAQYPVKHFPILAKLLADRYQPVAKTAEGVIYRMR*
Ga0134126_1246030813300010396Terrestrial SoilTLQRDFVRHPPAYIVDVHPGPNTAEYPVKNFPILAKFLRERYQPVARTAESVIYGMR*
Ga0137392_1136978523300011269Vadose Zone SoilEQDFTRHPPTYIVDVQPDPKSAQYPVKNFPILAKLLAQRYQPVAHTAEGVIYRMR*
Ga0137391_1107371113300011270Vadose Zone SoilRHPPTYIVDVQPDPKSAQYPVKDFPILARLLAERYQPVAHTAEGVIYRMR*
Ga0137393_1113955223300011271Vadose Zone SoilLPGAWSILEQDFARHPPTYIVDVQPDPKSAQYPVKDFPILARLLAKRYQPVAHTAEGVIYRMR*
Ga0137393_1123746233300011271Vadose Zone SoilARHPPTYIVDVQADPKTAQYPVKNFPILAKLLAEWYQPVAYTAEGVIYRMR*
Ga0137388_1160301413300012189Vadose Zone SoilYIVDVQADPKIAQYPVKNFPILAKLLAEWYQPVAYTAEGVIYRMR*
Ga0137383_1057187213300012199Vadose Zone SoilTLEQDFARHPPNYIVDVRPDPKSAYYPVKDFPILAKFLAERYQAKVQVAEGVIYRMR*
Ga0137362_1031217713300012205Vadose Zone SoilTAQDPVRNFPILAKLLKERYQPVARTAEGVIYRMR*
Ga0137380_1067502223300012206Vadose Zone SoilLPGAWTNLEQDFARHPPIYIVDLQADPKTAQYPVKDFPILTKLLAEQYQPVAHTAEGMIYRMR*
Ga0137376_1065626613300012208Vadose Zone SoilAQDPVKNFPILTKLLAEQYEPVAHTAEGVIYRMR*
Ga0137379_1163855513300012209Vadose Zone SoilLPGAWTNLEQDFARHPPTYIVDVQADPKTAQHPVKNFPILTKPLAERYQPVAHTAEGMIYRMR*
Ga0137378_1129243523300012210Vadose Zone SoilGALYPVQDFPILAKLLVERYQPVARTAEGVIYRMR*
Ga0137387_1068725713300012349Vadose Zone SoilPPTYIVDVQADPKTAQHPVKNFPILAKLLAEQYQPVAYTAEGVIYRMR*
Ga0137372_1084736323300012350Vadose Zone SoilKSAYYPVKNFPILAKLLADRYQPVAQTAEGVIYRMR*
Ga0137366_10000305243300012354Vadose Zone SoilYIVDVQPDPKTAHYPVKNFPILAKLLTERYQPVAHTAEGVIYRMR*
Ga0137369_1030013513300012355Vadose Zone SoilFAKHSPTYIVDVQADPKMAPYPVKNFPILAKLLAEHYQPVARTAEGVIYGRR*
Ga0137384_1032865513300012357Vadose Zone SoilSAQYAVKNFPILAKILTERYQPVAQTAEGVIYRMR*
Ga0137384_1040501923300012357Vadose Zone SoilKTAHYPLKNFPILAKLLTERYQPVAHTAEGVIYRMR*
Ga0137361_1010802613300012362Vadose Zone SoilIIDVQSDPKTAQDPVRNFPILAKLLKERYQPVARTAEGGIYRMR*
Ga0137358_1096962913300012582Vadose Zone SoilTILEQDFARHPPIYIVDVHPDPKSAQNPVKNFPILAKLLAERFQPVAHTAEGVIYGMR*
Ga0157297_1004094313300012914SoilLEQDFSRHPPKYIVDVHPDPRSAYYPVKHFPILAKLLTERYQPVARTAEAVIYRMR*
Ga0157302_1003558923300012915SoilQPDPKSAQYPVQNFPILANLLADRYQPVAKTAEGVIYRMR*
Ga0137394_1137779713300012922Vadose Zone SoilPDPKSAQNPVKNFPILAKLLAEHYQPVARTVEGMIYRMR*
Ga0137359_1095189523300012923Vadose Zone SoilQSDPKTAQYPVKNFPILAKLLAEQYQPVAHTAEGVIYRMR*
Ga0137419_1084107423300012925Vadose Zone SoilVHPDPKSAQNPVKNFPILAKLLADRYQPVAHTAEGVIYGMR*
Ga0137419_1195547023300012925Vadose Zone SoilVHPDPKSAQNPVKNFPILAKLLADRYQPVAQTAEGVIYRMR*
Ga0137404_1130730223300012929Vadose Zone SoilLPGAWTTLERDFAKHPPTYIIDVQPDPKTAQDPVRNFPILAKRLAERYQPVAHTAEGVIYRMR*
Ga0164298_1058935813300012955SoilDFARHPPAYIVDVQDPSKAQYPVKDFPILAKLLAEKYQPVAHTVEGVIYRVR*
Ga0126369_1159728123300012971Tropical Forest SoilLPGAWATLVQDFARHPPAYIVDVQDPSKAQYPVKDFPILAKLLAEKYQPVAHTAEGVIYRLR*
Ga0134110_1004520023300012975Grasslands SoilAQYPVKNFPILAKLLAEQYQPVAHTAEGVIYRMR*
Ga0164308_1070663913300012985SoilQDFARHPPIYIVDVQPDPKSAQYPVKNFPILAKLLADRYQRVAKTAEGVIYRMR*
Ga0164304_1169543113300012986SoilRLTPTYIVDVQPDPKRAQNPVKNFPILAKLLAERYQPMAHSAEGKQ*
Ga0157373_1075733713300013100Corn RhizosphereTYIVDVQPDPKSAQYPVKNFPILAKLLADRYQPVAKTAEGVIYRMR*
Ga0157371_1025540523300013102Corn RhizosphereTRHPPTYIVDVQPDPKSAQYPVKNFPILAKLLADRYQPVAKTAEGVIYRMR*
Ga0157374_1084774913300013296Miscanthus RhizosphereTLVQDFARHPPAYIVDVQDPGNAEYPVKDFPILAKLLAEKYQPVAHTAEGVIYRVR*
Ga0157377_1014900913300014745Miscanthus RhizospherePDPKSAQYPVKNFPILAKLLADRYQPVAKTAEGVIYRMR*
Ga0137414_100065943300015051Vadose Zone SoilRPDPKSAYYPVKDFPILAKFLAERYQPEVQVAEGVIYRMR*
Ga0137414_100066013300015051Vadose Zone SoilPTRNPKSAYYPVKDFPILAKFLAERYQPEVQVAEGVIYRMR*
Ga0137414_114705513300015051Vadose Zone SoilRPDPKSAYYYPVKDFPILAKFLAERYQPEVQVAEGVIYRMR*
Ga0137418_1068370113300015241Vadose Zone SoilYSHPGARYPVRNFPILAKLLAERYQLVTTTAEGDIYRMR*
Ga0134073_1015658113300015356Grasslands SoilGAWTILEQDFATHPPTYIVDVHPDPKSAYYPVKNFPILAKLLADRYQPVAQTAEGVIYRMR*
Ga0134073_1035865013300015356Grasslands SoilWSILQRDFAKHPPTYIVDVQSDSRTLQYPVKNFPILDTLLKERYQPVARTAEGTIYRMR*
Ga0134085_1015236933300015359Grasslands SoilQHDFAKHSPTYIVDVQADPKMAPYPVKNFPILAKLLAEHYQPVARTAEGVIYGRR*
Ga0132258_1114827533300015371Arabidopsis RhizosphereSAYYPVKDFPILAKLLTDRYQPVARTAEGVIYRMR*
Ga0132255_10336550813300015374Arabidopsis RhizosphereYIVDVQPDPRSAHYPVKDFPILAKLLTERYQPVAHTAEGVIYRMR*
Ga0182032_1049701113300016357SoilVDVESDPNTAENPVKDFPILAKLLNTRYQPVARTDEGVIYRMH
Ga0182038_1137631813300016445SoilDLYSQPGALYPTRDFPILSKLLAGQYRPVARTAEGVIYQIR
Ga0184621_1005247713300018054Groundwater SedimentHPPTYIVDVQRDPKNAQYPVKNFPILAKFLADRYRPVAQTAEGVIYRMR
Ga0184619_1035823713300018061Groundwater SedimentAKSAQRPVKNLPILAKLLAERYQPVAHTAEDVTYRIR
Ga0066662_1276493813300018468Grasslands SoilQDFAKHPPAYIVDVQDPSKARYPVKDFPILAKLLGEQYEPVAHTAEGVIYRMR
Ga0066669_1019244313300018482Grasslands SoilAKTAQYSVKNFPILAKLLAERCRPVAHTAEGVIYRMR
Ga0066669_1144108213300018482Grasslands SoilPKSAHYPVKNFPISAKLLAEGYQPVAHTGEGVIYRMR
Ga0193704_108535113300019867SoilSAYYPVKDFRILARLLAERYQPVAQTAEGVIYRMR
Ga0193727_114716523300019886SoilDPKTAQDRITNFPILAKLLKERYQPVARTVEGMIYRMR
Ga0193735_111117623300020006SoilIVDVQADPKTAQHPVKNFPILAKLLAERYQLVAYTAEGVIYRMR
Ga0126371_1367769423300021560Tropical Forest SoilESDPKDAQDPVKDFPILANVLKERYQPVASTAEGVIYRMR
Ga0213880_1001190113300021953Exposed RockDPGWQYPVKNFPVLARLLADRYEAVTRTAQGTIYRLRPQ
Ga0179589_1063894523300024288Vadose Zone SoilDFARHPPTYIVDVHPDPKSAQNPVKNFPILAKLLADRYQPVAQTAEGVIYRMR
Ga0207687_1126562823300025927Miscanthus RhizospherePTYIVDVQPDPKSAQYPVKNFPILAKLLADRYQPVAKTAEGVIYRMR
Ga0207691_1118441223300025940Miscanthus RhizosphereERDFARHPPTYIIDVQSDTRTLQYPVKNFPILTKLLKERYQPVARTAEGVIYRMR
Ga0207702_1030288213300026078Corn RhizosphereWRTLGQDFTRHPPTYIVDVQPDPKSAQYPVQNFPILANLLADRYQPVAKTAEGVIYRMR
Ga0207698_1116696833300026142Corn RhizosphereVQSDTRTLQYPAKNFPILTKLLKERYQPVARTAEGVIYRMR
Ga0209234_127000513300026295Grasslands SoilALEQDFARHPPTYIVDVQPDPKTAQYPVKNFPILAKLLAEQYQPVAHTAEGVIYRMR
Ga0209238_110988823300026301Grasslands SoilPDPKSAYYPVKDFPILAKFLAERYQPEVQVAEGVIYRMR
Ga0209239_111777013300026310Grasslands SoilTYIVDVQPDPKTAQYPVKNFPILAKLLAEQYQPVAHTAEGVIYRMR
Ga0209473_125543513300026330SoilDSRTLQYPVKNFPILDTLLKERYQPVARTAEGTIYRMR
Ga0257156_108063923300026498SoilQADPQTAQHPVKNFPILAKLLAERYQLVAYTAEGVIYRMR
Ga0209156_1011828323300026547SoilYIVDVQSDSRTLQYPVKNFPILDTLLKERYQPVARTAEGTIYRMR
Ga0209577_1006364433300026552SoilPTKAQYPVKDFPILAKLIAEKYRPVAHTAEGVIYRMR
Ga0179587_1034462223300026557Vadose Zone SoilYIVDVHPDPKSAQNPVKNFPILAKLLAERYQPVAHTAEGVIYGMR
Ga0179587_1067336113300026557Vadose Zone SoilHPDPKSAQNPVKNFPILAKLLADRYQPVAQTAEGVIYRMR
Ga0209325_100695523300027050Forest SoilPPAYIVDVQDPTKAQYPVKDFPILATLLNKRYHPVARTDEGVIYRMR
Ga0075374_1106856423300030855SoilYIVDLQADPKTAQYPVKDFPILAKLLAEGYQPVAHTAEGVIYRMR
Ga0170822_1435875913300031122Forest SoilWTNLEQDFARHPPIYIVDLQANPKTAQHPVKDFPILAKLLAEGYQPVEHTAEGVIYRMR
Ga0306917_1050333023300031719SoilWAALEQDFARHPPKYIVDVESDPNTAENPVKDFPILAKLLNTRYQPVARTDEGVIYRMH
Ga0310910_1106124523300031946SoilTYIVDVQPDPKSAHYPVKNFPILAKLLTERYQPVAHTAEGVIYQMR
Ga0310909_1082993013300031947SoilDFARHPPKYIVDVESDPNTAENPVKDFPILAKLLNTRYQPVARTDEGVIYRMH
Ga0308176_1118483513300031996SoilSTLEQDFTRHSPTYIVDVQPDPKSAQYPVKNFPILAKLLADRYQPVAKTAEGVIYRMR
Ga0307470_1038564013300032174Hardwood Forest SoilQNPVKNFPILAKLLAERYQPVAHTAEGVIYRTNVRP
Ga0307472_10021224233300032205Hardwood Forest SoilDPKTAQYPVKNFPILAKFLAERYQPVAHTVEGVIYRMR
Ga0307472_10084108923300032205Hardwood Forest SoilDVQPDPKSAQNPVKNFPILAKLLAERYQPVAHTAEGVIYRTNVRP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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