Metagenome / Metatranscriptome Family F097530

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F097530
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	61 residues
Representative Sequence	MHLLGKAELVIPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDKVPLLRQVS
Number of Associated Samples	76
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	80.77 %
% of genes near scaffold ends (potentially truncated)	24.04 %
% of genes from short scaffolds (< 2000 bps)	81.73 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (78.846 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.192 % of family members)
Environment Ontology (ENVO)	Unclassified (42.308 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (57.692 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 24.44% Coil/Unstructured: 75.56%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00535	Glycos_transf_2	14.42
PF01370	Epimerase	2.88
PF13578	Methyltransf_24	1.92
PF04860	Phage_portal	1.92
PF04149	DUF397	0.96
PF03354	TerL_ATPase	0.96
PF08241	Methyltransf_11	0.96
PF13641	Glyco_tranf_2_3	0.96
PF13489	Methyltransf_23	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	Mobilome: prophages, transposons [X]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.85 %
All Organisms	root	All Organisms	21.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.85 %
cellular organisms	root	All Organisms → cellular organisms	16.35 %
Viruses	superkingdom	All Organisms → Viruses	4.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.85 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	16.35 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	3.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	12.50 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	3.85 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12.50 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	3.85 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11.54 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3.85 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.96 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.85 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	3.85 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	2.88 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	1.92 %
Miltoncostaeales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales	0.96 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.96 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.85 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.85 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	2.88 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	1.92 %
Miltoncostaeaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae	0.96 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.96 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.85 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.85 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	1.92 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1.92 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.96 %
Miltoncostaea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea	0.96 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.96 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.85 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.85 %
unclassified Micromonospora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora	1.92 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	1.92 %
Miltoncostaea marina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea marina	0.96 %
Actinoplanes palleronii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes palleronii	0.96 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.96 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.85 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.85 %
Micromonospora sp. C51	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. C51	1.92 %
Frankia sp. Cj3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. Cj3	1.92 %
Miltoncostaea marina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea marina	0.96 %
Actinoplanes palleronii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes palleronii	0.96 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.96 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.96 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459002\|F0B48LX02HEXIG	Not Available	524	Open in IMG/M
2170459005\|F1BAP7Q01DY6B4	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes palleronii	551	Open in IMG/M
3300004479\|Ga0062595_101058228	Not Available	704	Open in IMG/M
3300005329\|Ga0070683_102012242	Not Available	555	Open in IMG/M
3300005337\|Ga0070682_102024789	Not Available	507	Open in IMG/M
3300005341\|Ga0070691_10624630	Not Available	638	Open in IMG/M
3300005341\|Ga0070691_10746037	Not Available	592	Open in IMG/M
3300005435\|Ga0070714_101039490	Not Available	798	Open in IMG/M
3300005436\|Ga0070713_100000151	All Organisms → Viruses	46466	Open in IMG/M
3300005437\|Ga0070710_10111389	Not Available	1645	Open in IMG/M
3300005437\|Ga0070710_10743296	Not Available	696	Open in IMG/M
3300005458\|Ga0070681_10483119	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1152	Open in IMG/M
3300005458\|Ga0070681_10575878	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1040	Open in IMG/M
3300005530\|Ga0070679_102128050	Not Available	511	Open in IMG/M
3300005535\|Ga0070684_100773313	Not Available	897	Open in IMG/M
3300005535\|Ga0070684_101535805	Not Available	628	Open in IMG/M
3300005542\|Ga0070732_10213672	Not Available	1153	Open in IMG/M
3300005563\|Ga0068855_100290782	Not Available	1811	Open in IMG/M
3300005563\|Ga0068855_100778308	Not Available	1018	Open in IMG/M
3300005563\|Ga0068855_101491692	Not Available	694	Open in IMG/M
3300005563\|Ga0068855_102314062	Not Available	537	Open in IMG/M
3300005577\|Ga0068857_100096930	Not Available	2643	Open in IMG/M
3300005614\|Ga0068856_100350698	Not Available	1494	Open in IMG/M
3300005614\|Ga0068856_100857405	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	927	Open in IMG/M
3300005841\|Ga0068863_100062312	All Organisms → cellular organisms → Bacteria	3527	Open in IMG/M
3300006028\|Ga0070717_10462722	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1144	Open in IMG/M
3300006237\|Ga0097621_102266728	Not Available	520	Open in IMG/M
3300009093\|Ga0105240_10060406	All Organisms → cellular organisms → Bacteria	4726	Open in IMG/M
3300009098\|Ga0105245_10878237	Not Available	938	Open in IMG/M
3300009177\|Ga0105248_11347234	Not Available	807	Open in IMG/M
3300009551\|Ga0105238_10816461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. C51	949	Open in IMG/M
3300009551\|Ga0105238_11132203	Not Available	806	Open in IMG/M
3300009551\|Ga0105238_11566158	Not Available	688	Open in IMG/M
3300010154\|Ga0127503_10224898	Not Available	571	Open in IMG/M
3300010154\|Ga0127503_10430359	Not Available	980	Open in IMG/M
3300010154\|Ga0127503_10904631	Not Available	2056	Open in IMG/M
3300010371\|Ga0134125_11353662	Not Available	776	Open in IMG/M
3300010373\|Ga0134128_12393553	Not Available	582	Open in IMG/M
3300010379\|Ga0136449_103304806	Not Available	620	Open in IMG/M
3300010396\|Ga0134126_11546986	Not Available	730	Open in IMG/M
3300010877\|Ga0126356_10299717	Not Available	1135	Open in IMG/M
3300011009\|Ga0129318_10266656	Not Available	571	Open in IMG/M
3300011009\|Ga0129318_10357951	Not Available	512	Open in IMG/M
3300012206\|Ga0137380_10188733	Not Available	1873	Open in IMG/M
3300012207\|Ga0137381_10004453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10147	Open in IMG/M
3300012209\|Ga0137379_10147425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2261	Open in IMG/M
3300012351\|Ga0137386_10003032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10957	Open in IMG/M
3300012356\|Ga0137371_11075954	Not Available	606	Open in IMG/M
3300012929\|Ga0137404_10907747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	803	Open in IMG/M
3300012984\|Ga0164309_10608668	Not Available	854	Open in IMG/M
3300012986\|Ga0164304_11628027	Not Available	538	Open in IMG/M
3300013105\|Ga0157369_11852009	Not Available	613	Open in IMG/M
3300013307\|Ga0157372_13091990	Not Available	531	Open in IMG/M
3300014969\|Ga0157376_11795227	Not Available	649	Open in IMG/M
3300019999\|Ga0193718_1120706	Not Available	519	Open in IMG/M
3300020069\|Ga0197907_10282270	Not Available	682	Open in IMG/M
3300020070\|Ga0206356_11176260	Not Available	759	Open in IMG/M
3300020078\|Ga0206352_10446795	Not Available	728	Open in IMG/M
3300020082\|Ga0206353_10273135	Not Available	711	Open in IMG/M
3300021178\|Ga0210408_11297649	Not Available	552	Open in IMG/M
3300021403\|Ga0210397_10057135	Not Available	2520	Open in IMG/M
3300022467\|Ga0224712_10253788	Not Available	813	Open in IMG/M
3300024179\|Ga0247695_1075228	Not Available	506	Open in IMG/M
3300024181\|Ga0247693_1001258	Not Available	2928	Open in IMG/M
3300024181\|Ga0247693_1023635	Not Available	828	Open in IMG/M
3300024186\|Ga0247688_1000869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6106	Open in IMG/M
3300024187\|Ga0247672_1038827	Not Available	780	Open in IMG/M
3300024222\|Ga0247691_1000278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. Cj3	11330	Open in IMG/M
3300024222\|Ga0247691_1005017	Not Available	2307	Open in IMG/M
3300024222\|Ga0247691_1007699	Not Available	1815	Open in IMG/M
3300024232\|Ga0247664_1103376	Not Available	661	Open in IMG/M
3300024232\|Ga0247664_1139634	Not Available	567	Open in IMG/M
3300024249\|Ga0247676_1039895	Not Available	760	Open in IMG/M
3300024279\|Ga0247692_1009253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea marina	1538	Open in IMG/M
3300024279\|Ga0247692_1027772	Not Available	868	Open in IMG/M
3300024287\|Ga0247690_1037870	Not Available	565	Open in IMG/M
3300024323\|Ga0247666_1050308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. C51	844	Open in IMG/M
3300024323\|Ga0247666_1111344	Not Available	544	Open in IMG/M
3300024325\|Ga0247678_1025808	Not Available	909	Open in IMG/M
3300024331\|Ga0247668_1012887	Not Available	1737	Open in IMG/M
3300024331\|Ga0247668_1095372	Not Available	602	Open in IMG/M
3300025898\|Ga0207692_10095812	All Organisms → cellular organisms → Bacteria	1619	Open in IMG/M
3300025898\|Ga0207692_11028841	Not Available	544	Open in IMG/M
3300025898\|Ga0207692_11094960	Not Available	527	Open in IMG/M
3300025913\|Ga0207695_10034190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. Cj3	5533	Open in IMG/M
3300025913\|Ga0207695_10102886	Not Available	2848	Open in IMG/M
3300025913\|Ga0207695_10644853	Not Available	940	Open in IMG/M
3300025924\|Ga0207694_10067809	Not Available	2785	Open in IMG/M
3300025928\|Ga0207700_10000106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	50334	Open in IMG/M
3300025928\|Ga0207700_10527179	Not Available	1047	Open in IMG/M
3300025929\|Ga0207664_10282994	Not Available	1455	Open in IMG/M
3300025944\|Ga0207661_10735550	Not Available	908	Open in IMG/M
3300025949\|Ga0207667_10750238	Not Available	975	Open in IMG/M
3300025949\|Ga0207667_11161582	Not Available	753	Open in IMG/M
3300025949\|Ga0207667_11252729	Not Available	719	Open in IMG/M
3300025949\|Ga0207667_11371523	Not Available	681	Open in IMG/M
3300026023\|Ga0207677_11415920	Not Available	640	Open in IMG/M
3300026078\|Ga0207702_11700849	Not Available	624	Open in IMG/M
3300027176\|Ga0208992_1025723	Not Available	776	Open in IMG/M
3300027842\|Ga0209580_10071704	Not Available	1645	Open in IMG/M
3300027905\|Ga0209415_10282339	Not Available	1454	Open in IMG/M
3300031170\|Ga0307498_10001830	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	3256	Open in IMG/M
3300031823\|Ga0307478_10245855	Not Available	1452	Open in IMG/M
3300032160\|Ga0311301_10041066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11148	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.08%
Host-Associated	Host-Associated	26.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.27%
Plants	Host-Associated → Plants	26.92%
Aquatic	Environmental → Aquatic	4.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.27%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.50%
Freshwater	Environmental → Aquatic → Freshwater	2.88%
Marine	Environmental → Aquatic → Marine	1.92%
Roots	Host-Associated → Plants → Roots	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.12%
Loam	Environmental → Terrestrial → Soil → Loam	21.15%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.50%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.88%
Coastal	Environmental → Aquatic → Marine → Coastal	1.92%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.15%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	20.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.50%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.96%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.19%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	11.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.58%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	7.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	7.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	4.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.85%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.88%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.88%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.92%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.96%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011009	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_0.1_0.8_DNA	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300024186	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK29	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300024287	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK31	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300024325	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027176	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E1_02730380	2170459002	Grass Soil	MHLLGTAKLVLPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEHIYGVPGDKVPLLRQVS
E41_10447750	2170459005	Grass Soil	PDAPARRREAGLPAWEPDQGWRVLDPDGHVVSAGGKTIIRVQLTFTTAFEDEIGFDGNRVPLLRQVS
Ga0062595_1010582283	3300004479	Soil	MHLLGKAEIVPPPWEPDQGWRVLDPDGHLVSAGGKTIIHVELVFGELYGVDGDKVPLLRQ
Ga0070683_1020122422	3300005329	Corn Rhizosphere	MHLLGVAKLVLPPWEPDQGWRVLDPDGHVVSAGGKTIIRVELSFGDLFGVDGDKVPLLRQVS*
Ga0070682_1020247892	3300005337	Corn Rhizosphere	MHLLGKAELVIPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFGQVCGVPGDKVPLLRQVS*
Ga0070691_106246301	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MHLLGKAEIVPPPWEPDQGWRVLDPDGHLVSAGGKTIIHVELVFGELYGVDGSKVPLLRQVS*
Ga0070691_107460371	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MHLLGTAKLVIPEWEPDQGWRVLDPDGHVVDAGPKTIITVELVFEQVCGVPGDKVPLLRQVS*
Ga0070714_1010394903	3300005435	Agricultural Soil	MHLLGTAKLVIPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQIYGVDGGKVPLLRQVS*
Ga0070713_10000015176	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VHLLGTAELVIPEWEPDQGWRVLDPDGHVVDAGGKTIITAEFIFGQLFGVDGNQVPLLGAGQEQ*
Ga0070710_101113894	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MHLLGKARLVLPAWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQIYGVDGGKVPLLRQVS*
Ga0070710_107432961	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MHLLGTAKLVIPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDKIPLLKQVS*
Ga0070681_104831192	3300005458	Corn Rhizosphere	MHLLGKAELVIPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDKVPLLRQVS*
Ga0070681_105758783	3300005458	Corn Rhizosphere	MHLLGKAPLVIPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDKVPLLRQVS*
Ga0070679_1021280503	3300005530	Corn Rhizosphere	PAWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDKVPLLRQVS*
Ga0070684_1007733133	3300005535	Corn Rhizosphere	MHLLGTARLVLPPWEPDQGWRVLDPDGHVVSAGGKTIIHVELVFGQLYGTDGDKVPLLRQVS*
Ga0070684_1015358051	3300005535	Corn Rhizosphere	MHLLGVAKLVLPPWEPDQGWRVLDPDGHVVSAGGKTIIHVELSFGELYGVDGDKVPLLRQVS*
Ga0070732_102136721	3300005542	Surface Soil	MHLLGVAKLVLPPWEPDQGWRVLDPDGHVVDAGGKTLITAEFIFGELFGVDGNQ
Ga0068855_1002907825	3300005563	Corn Rhizosphere	MHLLGKAEIVIPEWEPDQGWRVLDPDGHLVSAGGKTIIHVELVFGELYGVDGAQVPLLRQVS*
Ga0068855_1007783082	3300005563	Corn Rhizosphere	MHLLGKAKLVIPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDKVPLLRQVS*
Ga0068855_1014916923	3300005563	Corn Rhizosphere	MHLLGTAKLVIPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDKVPLLRQVS*
Ga0068855_1023140623	3300005563	Corn Rhizosphere	MHLLGKAELVIPEWEPDQGWRVLDPDGHVVDAGGKTIIHVQLTFTTAFEDEFGVDGNRVPLLRQVS*
Ga0068857_1000969301	3300005577	Corn Rhizosphere	HLLGKAELVIPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDKVPLLRQVS*
Ga0068856_1003506983	3300005614	Corn Rhizosphere	VHLLGKAELVIPEWEPDQGWRVLDPDGHVVDAGGKTIIHVQLTFTTAFEDEFGVDGNRVPLLRQVS*
Ga0068856_1008574051	3300005614	Corn Rhizosphere	VHLLGTAKLVIPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGD
Ga0068863_1000623122	3300005841	Switchgrass Rhizosphere	VHLLGKAELVIPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDKVPLLRQVS*
Ga0070717_104627222	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VHLLGTAKLVIPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDKVPLLRQVS*
Ga0097621_1022667281	3300006237	Miscanthus Rhizosphere	EWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDKVPLLRQVS*
Ga0105240_100604063	3300009093	Corn Rhizosphere	VHLLGTAKLVIPEWEPDQGWRVLDPDGHVVDAGGKTIIHVELVFGELYGVDGSKVPLLRQVS*
Ga0105245_108782371	3300009098	Miscanthus Rhizosphere	MHLLGKAELVIPEWEPDQGWRVLDPDGHVVDAGGKTMITVELVFEQVCGVPGDKVPLLRQ
Ga0105248_113472343	3300009177	Switchgrass Rhizosphere	VHLLGKAELVIPEWEPDQGWRVLDPDGHVVDAGGKTIITVKLVFEQVCGVPGDKVPLLRQVS*
Ga0105238_108164611	3300009551	Corn Rhizosphere	MHLLGKAPLVIPEWEPDQGWRVLDPDGHVVDAGPKTIITVELVFEQVCGVPGDRVPLLRQVS*
Ga0105238_111322034	3300009551	Corn Rhizosphere	MHLLGKAELVLPAWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDKVPLLRQVS*
Ga0105238_115661582	3300009551	Corn Rhizosphere	MHLLGTAKLVLPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDKVPLLRQVS*
Ga0127503_102248981	3300010154	Soil	PEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFKEVCGVPGDRIPLLRQVS*
Ga0127503_104303593	3300010154	Soil	MHLLGKAELVLPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVDGGKVPLLRQVS*
Ga0127503_109046314	3300010154	Soil	MHLLGKAQLVLPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDKVPLLRQVS*
Ga0134125_113536623	3300010371	Terrestrial Soil	VHLLGKAELVIPEWEPDQGWRVLDPDGHVVDAGGETIITVELVFEQVCGVPGDKVPLLRQVS*
Ga0134128_123935532	3300010373	Terrestrial Soil	MHLLGKAKLVIPEWEPDQGWRVLDPDGHVVDAGPKTIITVELVFEQVCGVPGDRVPLLRQVS*
Ga0136449_1033048062	3300010379	Peatlands Soil	MHLLGKAQIVLPDWEPDMGWRVLDLDGHVVSAGGKTIITAEFIFGELFGTDGNKVPLLGTGQER*
Ga0134126_115469862	3300010396	Terrestrial Soil	MHLLGKAQIVLPPWEPDQGWRVLDPDGHVVSAGGKTIIHVELVFGELYGVDGDKVPLLRQVS*
Ga0126356_102997173	3300010877	Boreal Forest Soil	MHLLGVAKVVLPPWEPDQGWRVLDPDGHVVSAGGKTIITASFIFGELFGVNGDQVPLVGAGQER*
Ga0129318_102666562	3300011009	Freshwater To Marine Saline Gradient	MHLLGRAEIVPPEWEPDQGWRVLDPDGHLVSAGGKTIIHVELVFKEVYGVPGDQIPLLRQVS*
Ga0129318_103579513	3300011009	Freshwater To Marine Saline Gradient	GKAEVVPPKWEPDQGWRVLDPDGHLVSAGGKTIIRVQLVFTHEFTDEFGVDGNRVPLLRQVS*
Ga0137380_101887332	3300012206	Vadose Zone Soil	MHLLGVAKLVLPAWEPDQGWRVLDPDGHVVDAGGKTIIHVQLEFGELYGVDGGKVPLLRQVS*
Ga0137381_1000445315	3300012207	Vadose Zone Soil	VHLLGKAQLVLPAWEPDQGWRVLDPDGHVIDAGGKTVIRVQLEFGELYGVDGGKVPLLRQVS*
Ga0137379_101474253	3300012209	Vadose Zone Soil	MHLLGVARLVLPAWEPDQGWRVLDPDGHVIDAGGKTVIHVQLEFGELYGVDGDKVPLLLRQVS*
Ga0137386_100030321	3300012351	Vadose Zone Soil	VHLLGKAQLVLPAWEPDQGWRVLDPDGHVIDAGGKTVIRVQLEFGELYGVNGDKVPLLRQVS*
Ga0137371_110759542	3300012356	Vadose Zone Soil	MHLLGVAKLVLPAWEPDQGWRVLDPDGHVVDAGGKTIIRVELSFTHEFTQMYGVDGNQVPLLRQVS*
Ga0137404_109077472	3300012929	Vadose Zone Soil	MHLLGVAKLVLPAWEPDQGWRVLDPDGHVVDAGGKTIITVELVFKQVYGIDGDKIPLLRQVS*
Ga0164309_106086682	3300012984	Soil	MHLLGKAPLVIPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDRVPLLRQVS*
Ga0164304_116280272	3300012986	Soil	MHLLGTAKLVIPEWEPDQGWRVLDPDGHVVSAGGKTIIRVELVFGELYGTDGDKVPLLRQVS*
Ga0157369_118520093	3300013105	Corn Rhizosphere	MHLLGKAEIVIPEWEPDQGWRVLDPDGHVVDAGGKTIIHVELVFGELYGVDGGTVPLLRQVS*
Ga0157372_130919903	3300013307	Corn Rhizosphere	ATVHLLGTAKLVIPEWEPDQGWRVLDPDGHVVDAGGKTIIMVELVFEQVCGVPGDKVPLLRQVR*
Ga0157376_117952272	3300014969	Miscanthus Rhizosphere	VYLLGKAELVIPEWEPDQGWRVLDPDGHVVDAGPKTIITVELVFEQVCGVPGDKVPLLRQVS*
Ga0193718_11207061	3300019999	Soil	MHLLGKAEIVPPPWEPDQGWRVLDPDGHLVSAGGKTIIHVELVFGELYGVDGSTVPLLRQVS
Ga0197907_102822703	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MHLLGKAELVIPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDKVPLLRQVS
Ga0206356_111762602	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MHLLGKAELVIPEWEPDQGWRVLDPDGHVVDAGPKTIITAELVFEQVCGVPGDKVPLLRQVS
Ga0206352_104467952	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	VHLLGKAELVIPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDKVPLLRQVS
Ga0206353_102731352	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MHLLGKAPLVIPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDKVPLLRQVS
Ga0210408_112976492	3300021178	Soil	MHLLGVAQVTVPEWEPDQGWRVLDPDGHVVDAGGKTIIRAEFVFGELFGVDADQVPLVGVGQER
Ga0210397_100571352	3300021403	Soil	VHLLGKAQIVLPQWEPDQGWRVLDPDGHVVDAGGKTIIRAEFVFGELFGVDADQVPLVGVGQER
Ga0224712_102537882	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MHLLGRAELVIPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDKVPLLRQVS
Ga0247695_10752282	3300024179	Soil	MHLLGKAELVLPAWEPDQGWRVLDPDGHVVDAGGKTIIHVELSFTHEFTREFGVDGNRVPLLRQVS
Ga0247693_10012584	3300024181	Soil	MHLLGKAQIVLPAWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDKIPLLRQVS
Ga0247693_10236352	3300024181	Soil	MHLLGKAEIVPPPWEPDQGWRVLDPDGHLVSAGGKTIIHVELVFGELYGVDGSKVPLLRQVS
Ga0247688_10008697	3300024186	Soil	MHLLGKAQIVLPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDKIPLLRQVS
Ga0247672_10388271	3300024187	Soil	MHLLGKAQLVLPAWEPDQGWRVLDPDGHVVDAGGKTIITVELVFKEVYGVPGDKIPLLRQVS
Ga0247691_100027810	3300024222	Soil	MHLLGKAKLVIPEWEPDQGWRVLDPDGHVVDAGGKTIIHVELVFGELYGVDGSRVPLLRQVS
Ga0247691_10050174	3300024222	Soil	MHLLGKAEIVPPPWEPDQGWRVLDPDGHVVSAGGKTIIHVELVFGQIYGVDGDKVPLLRQVS
Ga0247691_10076991	3300024222	Soil	LVIPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGGKVPLLKQVS
Ga0247664_11033763	3300024232	Soil	PEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDKVPLLRQVS
Ga0247664_11396342	3300024232	Soil	MHLLGKAELVIPEWEPDQGWRVLDPDGHVVDAGGKTIIHVQLTFTTAFEDEFGVDGNRVPLLRQVS
Ga0247676_10398953	3300024249	Soil	MHLLGKAEIVLPPWEPDQGWRVLDPDGHVVSAGGKTIIHVELVFGQIYGVDGDTVPLLRQVS
Ga0247692_10092533	3300024279	Soil	VHLLGTAKLVIPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDKVPLLRQVS
Ga0247692_10277721	3300024279	Soil	MHLLGKAELVLPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDKVPLL
Ga0247690_10378702	3300024287	Soil	MHLLGKAEIVPPEWEPDQGWRVLDPDGHVVSAGGKTIIHVELVFGELYGVDGDKVPLLRQVS
Ga0247666_10503081	3300024323	Soil	MHLLGTAKLVIPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDK
Ga0247666_11113442	3300024323	Soil	MHLLGKAQLVIPAWEPDQGWRVLDPDGHVVDAGGKTIIAVELVFKEVCGVPGDQIPLLRKAS
Ga0247678_10258083	3300024325	Soil	MHLLGKARIVLPAWEPDQGWRVLDPDGHVVSAGGKTIIRVELVFGELYGTDGDKVPL
Ga0247668_10128871	3300024331	Soil	LLGTAKLVIPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDKVPLLRQVS
Ga0247668_10953721	3300024331	Soil	MHLLGKAELVIPEWEPDQGWRVLDPDGHVVDAGGKTIIHVQLTFTTAFEDEFGMDGNRVPLLRQVS
Ga0207692_100958123	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MHLLGKARLVLPAWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQIYGVDGGKVPLLRQVS
Ga0207692_110288411	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	TAKLVIPEWEPDQGWRVLDPDGHVVDAGPKTIITVELVFEQVCGVPGDKVPLLRQVS
Ga0207692_110949603	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	TAKLVIPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDKIPLLKQVS
Ga0207695_100341908	3300025913	Corn Rhizosphere	MHLLGKAELVIPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFGQVCGVPGDKVPLLRQVS
Ga0207695_101028863	3300025913	Corn Rhizosphere	VHLLGTAKLVIPEWEPDQGWRVLDPDGHVVDAGGKTIIHVELVFGELYGVDGSKVPLLRQVS
Ga0207695_106448534	3300025913	Corn Rhizosphere	PPMHLLGKAELVIPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDKVPLLRQVS
Ga0207694_100678096	3300025924	Corn Rhizosphere	MHLLGTAKLVLPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDKVPLLRQVS
Ga0207700_100001068	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VHLLGTAELVIPEWEPDQGWRVLDPDGHVVDAGGKTIITAEFIFGQLFGVDGNQVPLLGAGQEQ
Ga0207700_105271791	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MHLLGKARLVLPAWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQIYGVDGGKVPLLR
Ga0207664_102829943	3300025929	Agricultural Soil	MYLLGKAELVIPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQIYGVDGGKVPLLRQVS
Ga0207661_107355503	3300025944	Corn Rhizosphere	MHLLGKAQLVLPAWEPDQGWRVLDPDGHVVSAGGKTIIHVELVFGQLYGTDGDKVPLLRQVS
Ga0207667_107502381	3300025949	Corn Rhizosphere	MHLLGKAEIVIPEWEPDQGWRVLDPDGHLVSAGGKTIIHVELVFGELYGVDGAQVPLLRQVS
Ga0207667_111615823	3300025949	Corn Rhizosphere	LVIPEWEPDQGWRVLDPDGHVVDAGGKTIIHVQLTFTTAFEDEFGVDGNRVPLLRQVS
Ga0207667_112527291	3300025949	Corn Rhizosphere	RALMHLLGKAEIVPPPWEPDQGWRVLDPDGHLVSAGGKTIIHVELVFGELYGVDGDKMPLLRQVS
Ga0207667_113715233	3300025949	Corn Rhizosphere	VYLLGKAELVIPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDKVPLLRQVS
Ga0207677_114159202	3300026023	Miscanthus Rhizosphere	VHLLGTAKLVIPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFGQVCGVPGDKVPLLRQVS
Ga0207702_117008493	3300026078	Corn Rhizosphere	IMHLLGKAPLVIPEWEPDQGWRVLDPDGHVVDAGGKTIITVELVFEQVCGVPGDKVPLLRQVS
Ga0208992_10257233	3300027176	Forest Soil	MHLLGKAELVLPAWEPDQGWRVLDPDGHVIDAGGKTIIHVELVFGELYGVDGSKVPLLRQVS
Ga0209580_100717043	3300027842	Surface Soil	MHLLGVAKLVLPPWEPDQGWRVLDPDGHVVDAGGKTLITAEFIFGELFGVDGNQVPLLGAGQR
Ga0209415_102823391	3300027905	Peatlands Soil	VHLIGVAQLVLPAWEPDQGWRVLDPDGHVVDAGGKTIITAEFIFGELFGTDGNKVPLLGTGQER
Ga0307498_100018302	3300031170	Soil	MHLLGVAKLVLPPWEPDQGWRVLDPDGHVVSAGPKTIIYATIVFGQLYGTDGDSVPLIGMKQEQP
Ga0307478_102458552	3300031823	Hardwood Forest Soil	MNLLGVAQVTVPEWEPDQGWRVLDPDGHVVDAGGKTIIRAEFVFGQLFGVDADQVPLVGVGQER
Ga0311301_100410668	3300032160	Peatlands Soil	VHLIGVAQLVLPAWEPDQGWRVLDPDGHVVDAGGKTIITAEFIFGELFGTDGNQVPLLGAGQEHR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097530

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences