NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F097354

Metagenome / Metatranscriptome Family F097354

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F097354
Family Type Metagenome / Metatranscriptome
Number of Sequences 104
Average Sequence Length 79 residues
Representative Sequence MNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGVIRDKCKMVHEIVGGGVYDHMLMVQLSILQEAAYRFTPTL
Number of Associated Samples 86
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Viruses
% of genes with valid RBS motifs 6.73 %
% of genes near scaffold ends (potentially truncated) 15.38 %
% of genes from short scaffolds (< 2000 bps) 79.81 %
Associated GOLD sequencing projects 79
AlphaFold2 3D model prediction Yes
3D model pTM-score0.80

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Duplodnaviria (48.077 % of family members)
NCBI Taxonomy ID 2731341
Taxonomy All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater
(13.462 % of family members)
Environment Ontology (ENVO) Unclassified
(48.077 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(65.385 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 51.43%    β-sheet: 0.00%    Coil/Unstructured: 48.57%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.80
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.93.1.1: CCP-liked5aoga_5aog0.61408
a.121.1.1: Tetracyclin repressor-like, C-terminal domaind2g3ba22g3b0.60117
a.104.1.0: automated matchesd6cr2a16cr20.5948
a.168.1.1: SopE-like GEF domaind1gzsb_1gzs0.5785
a.121.1.1: Tetracyclin repressor-like, C-terminal domaind3br0a23br00.57573


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF02195ParBc 2.88
PF14192DUF4314 1.92
PF01145Band_7 1.92
PF11645PDDEXK_5 1.92
PF03235DUF262 1.92
PF00186DHFR_1 0.96
PF07460NUMOD3 0.96
PF08302tRNA_lig_CPD 0.96
PF10263SprT-like 0.96
PF04865Baseplate_J 0.96
PF01832Glucosaminidase 0.96
PF00856SET 0.96
PF00249Myb_DNA-binding 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG1479DNAse/DNA nickase specific for phosphorothioated or glycosylated phage DNA, GmrSD/DndB/SspE family, contains DUF262 and HNH nuclease domainsDefense mechanisms [V] 1.92
COG5324tRNA splicing ligaseTranslation, ribosomal structure and biogenesis [J] 0.96
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 0.96


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms79.81 %
UnclassifiedrootN/A20.19 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2236876004|none_p0067949All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage550Open in IMG/M
3300000882|FwDRAFT_10093693Not Available801Open in IMG/M
3300002835|B570J40625_101125863All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage662Open in IMG/M
3300002835|B570J40625_101649748All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage523Open in IMG/M
3300004112|Ga0065166_10527420All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage502Open in IMG/M
3300004240|Ga0007787_10105309All Organisms → Viruses → Predicted Viral1322Open in IMG/M
3300005527|Ga0068876_10029976All Organisms → Viruses → Predicted Viral3392Open in IMG/M
3300005581|Ga0049081_10098460All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1091Open in IMG/M
3300005662|Ga0078894_11784253All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage502Open in IMG/M
3300005739|Ga0076948_1129713All Organisms → Viruses → Predicted Viral1443Open in IMG/M
3300005805|Ga0079957_1027578All Organisms → Viruses → Predicted Viral3817Open in IMG/M
3300005805|Ga0079957_1039627All Organisms → Viruses → Predicted Viral3005Open in IMG/M
3300006484|Ga0070744_10004272All Organisms → Viruses → Predicted Viral4293Open in IMG/M
3300006641|Ga0075471_10027456Not Available3311Open in IMG/M
3300007639|Ga0102865_1032804All Organisms → Viruses → Predicted Viral1518Open in IMG/M
3300007972|Ga0105745_1168335Not Available678Open in IMG/M
3300007973|Ga0105746_1025118All Organisms → Viruses → Predicted Viral1789Open in IMG/M
3300007974|Ga0105747_1154799All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage741Open in IMG/M
3300008108|Ga0114341_10047166Not Available2825Open in IMG/M
3300008113|Ga0114346_1212563All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage759Open in IMG/M
3300008114|Ga0114347_1058312All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1616Open in IMG/M
3300008116|Ga0114350_1002322Not Available10261Open in IMG/M
3300008116|Ga0114350_1039903All Organisms → Viruses → Predicted Viral1785Open in IMG/M
3300008116|Ga0114350_1104688All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage886Open in IMG/M
3300008120|Ga0114355_1094180All Organisms → Viruses → Predicted Viral1196Open in IMG/M
3300008259|Ga0114841_1068954All Organisms → Viruses → Predicted Viral1644Open in IMG/M
3300008267|Ga0114364_1102024All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage891Open in IMG/M
3300009071|Ga0115566_10584854All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage626Open in IMG/M
3300009081|Ga0105098_10199873All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium923Open in IMG/M
3300009082|Ga0105099_10609804Not Available670Open in IMG/M
3300009152|Ga0114980_10620248All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage610Open in IMG/M
3300009165|Ga0105102_10146857All Organisms → Viruses → Predicted Viral1146Open in IMG/M
3300009180|Ga0114979_10242753Not Available1081Open in IMG/M
3300009182|Ga0114959_10087283All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1729Open in IMG/M
3300009182|Ga0114959_10294561All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage812Open in IMG/M
3300009183|Ga0114974_10667531All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage567Open in IMG/M
3300009419|Ga0114982_1076795All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1038Open in IMG/M
3300009419|Ga0114982_1293158Not Available510Open in IMG/M
3300010158|Ga0114960_10238484All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage933Open in IMG/M
3300012013|Ga0153805_1066520All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage610Open in IMG/M
3300012348|Ga0157140_10003210All Organisms → Viruses → Predicted Viral1805Open in IMG/M
3300012667|Ga0157208_10034413All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage682Open in IMG/M
3300012726|Ga0157597_1231910Not Available769Open in IMG/M
3300012733|Ga0157606_1168522Not Available539Open in IMG/M
3300012734|Ga0157615_1395840Not Available737Open in IMG/M
3300012777|Ga0138292_1382369Not Available653Open in IMG/M
3300013006|Ga0164294_10701193All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage684Open in IMG/M
3300013295|Ga0170791_12186627Not Available568Open in IMG/M
3300013372|Ga0177922_10819548All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage569Open in IMG/M
3300013372|Ga0177922_11093098Not Available565Open in IMG/M
3300013372|Ga0177922_11331097Not Available965Open in IMG/M
3300017774|Ga0181358_1166241All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage743Open in IMG/M
3300017777|Ga0181357_1284941Not Available565Open in IMG/M
3300017778|Ga0181349_1225471All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage637Open in IMG/M
3300020048|Ga0207193_1583834All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Myoviridae sp. ctNQV2743Open in IMG/M
3300020141|Ga0211732_1552207All Organisms → Viruses → Predicted Viral3301Open in IMG/M
3300020151|Ga0211736_10096168All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage667Open in IMG/M
3300020151|Ga0211736_10263732All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage677Open in IMG/M
3300020151|Ga0211736_10822336Not Available946Open in IMG/M
3300020159|Ga0211734_10999991All Organisms → Viruses → Predicted Viral1098Open in IMG/M
3300020159|Ga0211734_11010981All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage507Open in IMG/M
3300020159|Ga0211734_11125251All Organisms → Viruses → Predicted Viral1247Open in IMG/M
3300020159|Ga0211734_11332157All Organisms → cellular organisms → Bacteria → FCB group2970Open in IMG/M
3300020160|Ga0211733_10674897All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage749Open in IMG/M
3300020161|Ga0211726_10047757Not Available5330Open in IMG/M
3300020167|Ga0194035_1028128All Organisms → Viruses → Predicted Viral2070Open in IMG/M
3300021519|Ga0194048_10117064All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1017Open in IMG/M
3300021600|Ga0194059_1055906All Organisms → Viruses → Predicted Viral1283Open in IMG/M
3300021961|Ga0222714_10017791All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.5674Open in IMG/M
3300021962|Ga0222713_10411095Not Available830Open in IMG/M
3300021962|Ga0222713_10456876All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage773Open in IMG/M
3300022179|Ga0181353_1089042Not Available771Open in IMG/M
3300022407|Ga0181351_1087520All Organisms → Viruses → Predicted Viral1229Open in IMG/M
3300024346|Ga0244775_10010585All Organisms → cellular organisms → Bacteria8785Open in IMG/M
3300024346|Ga0244775_10457913All Organisms → Viruses → Predicted Viral1045Open in IMG/M
3300024348|Ga0244776_10114286All Organisms → Viruses → Predicted Viral2004Open in IMG/M
3300025732|Ga0208784_1235574All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage528Open in IMG/M
3300027121|Ga0255074_1011338All Organisms → Viruses → Predicted Viral1185Open in IMG/M
3300027123|Ga0255090_1028954All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage910Open in IMG/M
3300027134|Ga0255069_1040556All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage535Open in IMG/M
3300027156|Ga0255078_1006936All Organisms → Viruses → Predicted Viral2731Open in IMG/M
3300027659|Ga0208975_1209510All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage517Open in IMG/M
3300027708|Ga0209188_1013287All Organisms → Viruses → Predicted Viral4517Open in IMG/M
3300027710|Ga0209599_10078345All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage867Open in IMG/M
3300027710|Ga0209599_10200817All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage538Open in IMG/M
3300027712|Ga0209499_1000092All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage62547Open in IMG/M
3300027759|Ga0209296_1309756All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage624Open in IMG/M
3300027759|Ga0209296_1351741All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage567Open in IMG/M
3300027763|Ga0209088_10168441All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage956Open in IMG/M
3300027805|Ga0209229_10007709All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Candidatus Poseidoniia → Candidatus Poseidoniales → unclassified Candidatus Poseidoniales → Marine Group II euryarchaeote MED-G334503Open in IMG/M
3300027956|Ga0209820_1078513All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium887Open in IMG/M
(restricted) 3300028569|Ga0247843_1205193All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage748Open in IMG/M
(restricted) 3300028571|Ga0247844_1291241All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage561Open in IMG/M
3300031784|Ga0315899_11337595Not Available611Open in IMG/M
3300031786|Ga0315908_11087937All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage640Open in IMG/M
3300031857|Ga0315909_10135662All Organisms → Viruses → Predicted Viral2053Open in IMG/M
3300031951|Ga0315904_10338346All Organisms → Viruses → Predicted Viral1391Open in IMG/M
3300031951|Ga0315904_11198284All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage583Open in IMG/M
3300031963|Ga0315901_10605332All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage831Open in IMG/M
3300034061|Ga0334987_0038252All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium4107Open in IMG/M
3300034082|Ga0335020_0362824All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage702Open in IMG/M
3300034093|Ga0335012_0004760All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes8270Open in IMG/M
3300034117|Ga0335033_0606681All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage509Open in IMG/M
3300034356|Ga0335048_0135010All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1434Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater13.46%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake11.54%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater10.58%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake8.65%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton8.65%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater5.77%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment3.85%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater3.85%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface3.85%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater2.88%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water2.88%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine2.88%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water2.88%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater1.92%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic1.92%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake1.92%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater1.92%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous1.92%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine1.92%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment0.96%
Lake WaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake Water0.96%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment0.96%
Freshwater And MarineEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater And Marine0.96%
Surface IceEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Surface Ice0.96%
Marine EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Marine Estuarine0.96%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine0.96%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2236876004Estuarine microbial communities from Columbia River, sample from South Channel ETM site, GS313-0p1-ETM-15mEnvironmentalOpen in IMG/M
3300000882Freshwater microbial communities from the Columbia RiverEnvironmentalOpen in IMG/M
3300002835Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)EnvironmentalOpen in IMG/M
3300004112Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)EnvironmentalOpen in IMG/M
3300004240Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SNEnvironmentalOpen in IMG/M
3300005527Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaGEnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300005662Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)EnvironmentalOpen in IMG/M
3300005739Cyanobacteria communities in tropical freswater systems - freshwater lake in SingaporeEnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300006484Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535EnvironmentalOpen in IMG/M
3300006641Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300007639Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02EnvironmentalOpen in IMG/M
3300007972Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0umEnvironmentalOpen in IMG/M
3300007973Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2umEnvironmentalOpen in IMG/M
3300007974Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2umEnvironmentalOpen in IMG/M
3300008108Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NAEnvironmentalOpen in IMG/M
3300008113Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NAEnvironmentalOpen in IMG/M
3300008114Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-C-NAEnvironmentalOpen in IMG/M
3300008116Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NAEnvironmentalOpen in IMG/M
3300008120Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NAEnvironmentalOpen in IMG/M
3300008259Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NAEnvironmentalOpen in IMG/M
3300008267Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTREnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009081Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009082Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015EnvironmentalOpen in IMG/M
3300009152Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaGEnvironmentalOpen in IMG/M
3300009165Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015EnvironmentalOpen in IMG/M
3300009180Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaGEnvironmentalOpen in IMG/M
3300009182Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaGEnvironmentalOpen in IMG/M
3300009183Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaGEnvironmentalOpen in IMG/M
3300009419Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FTEnvironmentalOpen in IMG/M
3300010158Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaGEnvironmentalOpen in IMG/M
3300012013Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 67 - Surface IceEnvironmentalOpen in IMG/M
3300012348Freshwater microbial communities from Coldwater Creek, Ontario, Canada - S44EnvironmentalOpen in IMG/M
3300012667Freshwater microbial communities from Maskinonge River, Ontario, Canada - S15EnvironmentalOpen in IMG/M
3300012726Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES115 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012733Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES131 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012734Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES144 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012777Freshwater microbial communities from Lake Simoncouche, Canada - S_140709_E_mt (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013006Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaGEnvironmentalOpen in IMG/M
3300013295northern Canada Lakes metatranscriptome co-assemblyEnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300017774Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017777Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017778Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300020048Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915EnvironmentalOpen in IMG/M
3300020141Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1EnvironmentalOpen in IMG/M
3300020151Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1EnvironmentalOpen in IMG/M
3300020159Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1EnvironmentalOpen in IMG/M
3300020160Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1EnvironmentalOpen in IMG/M
3300020161Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1EnvironmentalOpen in IMG/M
3300020167Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L239-20mEnvironmentalOpen in IMG/M
3300021519Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5mEnvironmentalOpen in IMG/M
3300021600Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L626-11mEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300022179Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.NEnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
33000243480.2um to 3um size fraction coassemblyEnvironmentalOpen in IMG/M
3300025732Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027121Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepC_8hEnvironmentalOpen in IMG/M
3300027123Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepA_8dEnvironmentalOpen in IMG/M
3300027134Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Miss_RepA_8hEnvironmentalOpen in IMG/M
3300027156Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepA_8hEnvironmentalOpen in IMG/M
3300027659Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027708Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027710Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)EnvironmentalOpen in IMG/M
3300027712Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027759Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027763Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027805Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)EnvironmentalOpen in IMG/M
3300027956Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015 (SPAdes)EnvironmentalOpen in IMG/M
3300028569 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2017_8mEnvironmentalOpen in IMG/M
3300028571 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch201714.5m_1EnvironmentalOpen in IMG/M
3300031784Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112EnvironmentalOpen in IMG/M
3300031786Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA124EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300031963Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116EnvironmentalOpen in IMG/M
3300034061Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028EnvironmentalOpen in IMG/M
3300034082Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088EnvironmentalOpen in IMG/M
3300034093Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072EnvironmentalOpen in IMG/M
3300034117Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jun2014-rr0124EnvironmentalOpen in IMG/M
3300034356Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
none_006794912236876004Marine EstuarineMNNQVTKIFTDMTDMELSQVITELKEDSPQGIIRMDGVIRDKCRMVHEIVGGGVYDHMLMVQLSILQEAAYRFTPKK
FwDRAFT_1009369333300000882Freshwater And MarineMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGVIRDKCRMVHEIVGGGLYDHMLMVQLSILQEAAYRFTPTL*
B570J40625_10112586313300002835FreshwaterMINELTKIFSDMTDLELSQAIKEMKEDGPQGIIREDGIVRKKCKMVHEITKGNVYEHLMMVQFSILQEAAYRFTPKVN*
B570J40625_10164974823300002835FreshwaterNQPMYICGMNNQVTKIFTDMTDMELSKVISEIKEDSPQGIIRTDGIIRDKCKMVHEIVGGGVYEHMLMVQVSILQEAAYRFTPKL*
Ga0065166_1052742013300004112Freshwater LakeMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGIVRDKCKMVYDIVGGGVYDHLLMVQLSILQEAAYRFTPTL*
Ga0007787_1010530923300004240Freshwater LakeMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGIVRDKCKMVHDIVGGGVYDHLLMVQLSILQEAAYRFTPTL*
Ga0068876_1002997623300005527Freshwater LakeMYICGMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGVIRDKCRMVHEIVGGGVYDHMLMVQLSILQEAAYRFTPKL*
Ga0049081_1009846013300005581Freshwater LenticMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRTDGIIRDKCKMVHEIVGGGVYEHMLMVQVSILQEAAYRFTPTL*
Ga0078894_1178425323300005662Freshwater LakeMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGVIRDKCRMVHEIVGGGVYDHLLMVQLSILQEAAYRFTPTL*
Ga0076948_112971333300005739Lake WaterMENQVTKIFTDMDNLELVQAIREMKEDGPQGIIRSGGVVREKCEEVHKIVGGNTYEHLMMVQFAILQEAAYRFTPTTDELT*
Ga0079957_102757813300005805LakeMYICGMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRTDGIIRDKCKMVHEIVGGGVYEHMLMVQVSILQEAAYRFTPKL*
Ga0079957_103962743300005805LakeMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGVIRDKCRMVHEIVGGGVYDHMLMVQLSILQEAAYRFTPKL*
Ga0070744_1000427223300006484EstuarineMVNEITKVFSDMSDEELAQVIQEMKEDGPQGIIRMEGIIRKKCEMVQKIAGGDTYERMMMVQFSILQEAAYRFTPTMNKLTHNV*
Ga0075471_1002745633300006641AqueousMTDEELVLVIDEMREDDPQGIIRENGIVRSKCKMVHAIVGGNVYEHLTMVQVSILKEAAYRFTPTMDELTHNV*
Ga0102865_103280423300007639EstuarineMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGVIRDKCRMVHEIVGGGVYDHMLMVQLSILQEAAYRFTPKK*
Ga0105745_116833513300007972Estuary WaterFTDMTDMELSQVITEIKEDSPQGIIRMDGVIRDKCRMVHEIVGGGVYDHMLMVQLSILQEAAYRFTPTL*
Ga0105746_102511813300007973Estuary WaterMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGVIRDKCRMVHEIVGGGVYDHMLMVQLSILQEAAYRFTPTL*
Ga0105747_115479923300007974Estuary WaterMNNQLTKIFTDMTDMELSQVIGEMKEDNPQGIIRMDGIVRQKCRMVYDIVGGGVYDHLLMVQLSILQEAAYRFTPTL*
Ga0114341_1004716633300008108Freshwater, PlanktonMINEVTKIYTEMTDLELSQAIQEMKEDNLKGIIREDGVVRQKCKILQDIVGGNKYEHLMMVQFAILQEAAYRFTPKL*
Ga0114346_121256323300008113Freshwater, PlanktonMYICGMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGVIRDKCRMVHEIVGGGVYDHMLMVQLSILQEAAYRFTPKK*
Ga0114347_105831213300008114Freshwater, PlanktonMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGVIRDKCRMVHEIVGGGVYDHMLMVQLSILQEAAY
Ga0114350_100232263300008116Freshwater, PlanktonMTNKVTKIFSDMTDEELVLVIAEMKEDDPQGIIRENGIVRSKCKMVHNITGGNIYEHLMMVQISIIKEAAYRFTPTMDELTHTV*
Ga0114350_103990343300008116Freshwater, PlanktonFTDMTDMELSQVITEIKEDSPQGIIRMDGIVRDKCKMVYDIVGGGVYDHLLMVQLSILQEAAYRFTPTL*
Ga0114350_110468823300008116Freshwater, PlanktonMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRTDGIIRDKCKMVHEIVGGGVYEHMLMVQVSILQEAAYRFTPKL*
Ga0114355_109418023300008120Freshwater, PlanktonMYICGMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGVIRDKCRLVHEIVGGGVYDHMLMVQLSILQEAAYRFTPKN*
Ga0114841_106895443300008259Freshwater, PlanktonMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGVIRDKCKMVHEIVGGGVYDHMLMVQLSILQEAAYRFTPTL*
Ga0114364_110202423300008267Freshwater, PlanktonMINEVTKVFSGMSDEELAQVIQEMKEDGPQGIVRMEGVVRDKCKTVQEIVGGNAYEHMMMVQFSILQEAAYRFTPTMDELTHNV*
Ga0115566_1058485413300009071Pelagic MarineMYICGMNNQVTKIFTDMTDMELSKVISEIKEDSPQGIIRMDGVIRDKCRMVHEIVGGGVYDHMLMVQLSILQEAAYRFTPKL*
Ga0105098_1019987323300009081Freshwater SedimentMANEVTKVFSDMSNEELVQVIQEMKEDSPQGIIRMEGIIREKCKMVHKIVGGNVYEHMVMVQYSILQEAAYRFTPTMDELTHNV*
Ga0105099_1060980423300009082Freshwater SedimentMVNEITKVFSEMSDEELVQVIQEMKEDGPQGIIRMEGIIRKKCEMIQKIVGGDTYERMMMVQFSILQEAAYRFTPKIDELTHNV*
Ga0114980_1062024813300009152Freshwater LakeMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGVVRQKCRMVHEIVGGGLYDHMLMVQLSILQEAAYRFTPTL*
Ga0105102_1014685723300009165Freshwater SedimentMVNEITKVFSDMSDEELVQVIQEMKEDGPQGIIRMEGIIREKCKMVHKIVGGNVYEHMVMVQYSILQEAAYRFTPTMDELTHNV*
Ga0114979_1024275323300009180Freshwater LakeMANAITNIFSNMTDLELSQAIKEMKEDESIGIIREDGVVRKKCKMVNKITGGNVYEHQTMVQHSILQEAAYRFTPKI*
Ga0114959_1008728353300009182Freshwater LakeMANAITNIYSNMTDSELSQAIKEMKEDAPTGIIRENGIVREKCKMVNKITGGNVYEHQMSVQFSILQEAAYRFTPKI*
Ga0114959_1029456123300009182Freshwater LakeMANAITNIFSNMTDLELSQAIIEMKEDESIGIIREDGVVRKKCKMVNKITGGNVYEHQTMVQHSILQEAAYRFTPKI*
Ga0114974_1066753113300009183Freshwater LakeMINEVTKVFSDMTNEELVQVIQEMKEDNPQGIVRMGGVVREKCKMVQEIVGGNAYEQMMMVQFSILQEAAYRFTPTM*
Ga0114982_107679533300009419Deep SubsurfaceMVNEVTKVFSEMSDEELAQVIQEMKEDGPYGIIRMEGIIREKCHLVQKIAGGDTYERMMMVQFSILQEAAYRFTPTMEEIKK*
Ga0114982_129315813300009419Deep SubsurfaceMVNEITKVFSDMSDEELAQVIQEMKEDGPQGIIRMEGIIRKKCEMIQKIAGGDTYERMMMVQFSILQEAAYRFTPTMNKLTHNV*
Ga0114960_1023848443300010158Freshwater LakeMTDLELSQAIIEMKEDESIGIIREDGVVRKKCKMVNKITGGNVYEHQTMVQHSILQEAAYRFTPKI*
Ga0153805_106652023300012013Surface IceMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGVIRDKCRMVHEIVGGGIYEHMLMVQLSLFTEAAYRFTPKFNNEQQ*
Ga0157140_1000321073300012348FreshwaterMVNEITKVFSDMSNEELSQVIQEMKEDGPQGIIRMEGIIREKCKMIQKIAGGDTYERIMMVQFSILQEAAYRFTPTMEELTHNV*
Ga0157208_1003441313300012667FreshwaterMVNEITKVFSDMSNEELAQVIQEMKEDGPQGIIRMEGIIREKCNMIQKIVGGDTYERIMMVQFSILQEAAYRFTPKIDE
Ga0157597_123191023300012726FreshwaterMNNQVTKIFEDMTDMELVLFVQEMKEDSPQGIIRENGITRQKCRMVYDIVGGGVNDYLLMVQISILQKVAYRFTPSIDELTIN*
Ga0157606_116852213300012733FreshwaterMNNQVTKIFEDMTDMELVLFVQEMKEDSPQGIIRENGITRQKCRMVYDIVGGGVNDYLLMVQISILQKV
Ga0157615_139584023300012734FreshwaterMNNQVTKIFEDMTDMELVLFVQEMKEDSPQGIIRENGITRQKCRMVYDIVGGGVNDYLLMVQISILQKVAYRFTPSIDELTTK*
Ga0138292_138236923300012777Freshwater LakeMNNQVTKIFEDMTDMELSQFVQEMKEDSPQGIIRMDGVVRNKCRMVYDIIGGGVYDHMLMVQLSLFTEAAYRFTPSIDELTIN*
Ga0164294_1070119323300013006FreshwaterMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGVIRDKCRMVHEIVGGGVYDHLLMVQLSILQESAYRFTPKL*
Ga0170791_1218662713300013295FreshwaterLILFMNSLRNLITNNMNNQVTKIFEDMTDMELSQFVQEMKEDSPQGIIRMDGVVRNKCRMVYDIIGGGVYDHMLMVQLSLFTEAAYRFTPSIDELTIN*
Ga0177922_1081954823300013372FreshwaterMRNKVTKIFSDMTDEELVLVIDEMREDDPQGIIRENGIVRSKCKMVHDIVGGNTYEHLTMVQVSILRESAYRFTPTMDELTHNV*
Ga0177922_1109309823300013372FreshwaterMYICGMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGVIRDKCRLVHEIVGGGVYDHMLMVQLSILQEAAYRFT
Ga0177922_1133109713300013372FreshwaterMNNQVTKIFTDMTDMELSQVITELKEDSPQGIIRTDGVIRNKCKMVHDIVGGGVYDHMLMVQVSILQEAAYRFTPTL*
Ga0181358_116624133300017774Freshwater LakeMNNQVTEIFTNTTDMELSQFVQEMKEDNPQGIIRMDGIVRDKCRMVHEIVGGGIYEHMLMVQLSLFTEAAYRFTPKFNNDQTRI
Ga0181357_128494123300017777Freshwater LakeMNNQVTKIFEDMTDMELSQFVQEMKEDSPQGIIRTDGITRQKCRMVYDIVGGGVNDYLLMVQLSLLTEAAYRFTPSIDELTTK
Ga0181349_122547123300017778Freshwater LakeMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGVIRDKCIMVHEIVGGGVYDHMLMVQLSILQEAAYRFTPKL
Ga0207193_158383423300020048Freshwater Lake SedimentMVNEITKVFSDMSDEELAQVIQEMKEDGPQGIIRMEGIIRKKCAMIQKIVGGETYERMMMVQFSILQEAAYRFTPTMDELTHNV
Ga0211732_155220733300020141FreshwaterMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGVIRDKCRMVHEIVGGGVYEHMLMVQVSILQEAAYRFTPKL
Ga0211736_1009616813300020151FreshwaterMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGIVRDKCKMVHDIVGGGVYDHMLMVQVSILQEAAYRFTPTL
Ga0211736_1026373223300020151FreshwaterMNNQVTKIFADMTDMELSQFISEMKEDSPQGIIRMDGVVRDKCRMVHEIVGGGVYDHLLMVQLSILQEAAYRFTPKL
Ga0211736_1082233613300020151FreshwaterIFTDMTDMELSQVITEIKEDSPQGIIRMDGVIRDKCRMVHEIVGGGVYDHMLMVQLSILQEAAYRFTPKL
Ga0211734_1099999113300020159FreshwaterMNNQVTKIFADMTDMELSQFISEMKEDSPQGIIRMDGVVRDKCRMVHEIVGGGVYDHLLMVQLSILQEAAYRFTPIL
Ga0211734_1101098123300020159FreshwaterMTNKVTKIFSDMTDEELILVIAEMKEDDPQGIIRENGIVRSKCKMVLDIVGGNTYEHLMMVQVSIMKEAAYRFTPTMDELTHNV
Ga0211734_1112525113300020159FreshwaterMNNQVTKIFTDMTDMELSKVIREIKEDSPQGIIRMDGVIRDKCRLVHEIVGGGVYDHMLMVQLSILQEAAYRFTPKN
Ga0211734_1133215753300020159FreshwaterMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGIVRDKCKMVHDIVGGGVYDHMLMVQVSILQEAAYRFTPKN
Ga0211733_1067489723300020160FreshwaterMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGIVRDKCRMVHEIVGGGIYDHMLMVQLSILQEAAYRFTPTL
Ga0211726_1004775753300020161FreshwaterMTNKVTKIFSDMTDEELILVIAEMKEDDPQGIIRENGIVRSKCKMVLDIVGGYTYEHLIMVQVSIMKEAAYRFTPTMDI
Ga0194035_102812843300020167Anoxic Zone FreshwaterMNNQVTKIFTDMTDMELSQFISEMKEDSPQGIIRMDGIVRQKCRMVYEIVGGGVYDHLLMVQLSILQEAAYRFTPKL
Ga0194048_1011706413300021519Anoxic Zone FreshwaterMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGIVRDKCKMVHDIVGGGVYDHLLMVQLSILQEAAYRFTPTL
Ga0194059_105590633300021600Anoxic Zone FreshwaterMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGVIRDKCRMVHEIVGGGVYDHLLMVQL
Ga0222714_10017791123300021961Estuarine WaterMTDEELVLVIDEMREDDPQGIIRENGIVRSKCKMVHAIVGGNVYEHLTMVQVSILKEAAYRFTPTMDELTHNV
Ga0222713_1041109523300021962Estuarine WaterMINEVTKIFSEMTDLELSQVIKEMKEDGPQGIIRVDGIVRKKCKMVHEITEGNVYEHMLMVQFSILKEAAYRFTPTVN
Ga0222713_1045687623300021962Estuarine WaterMNNQVTKIFTDMTDMELSQVISEIKEDSPQGIIRTDGIIRDKCKMVHEIVGGSVYEHMLMVQVSILQEAAYRFTPKL
Ga0181353_108904223300022179Freshwater LakeMVNEITKVFSDMTNEELSQVIQEMKEDGLQGIIRMEGIIREKCKMIQKIAGGDTYERIMMVQFSILQEAAYRFTPTMEELTHNV
Ga0181351_108752023300022407Freshwater LakeMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGIVRDKCKMVYDIVGGGVYDHLLMVQLSILQEAAYRFTPTL
Ga0244775_1001058563300024346EstuarineMVNEITKVFSDMSDEELAQVIQEMKEDGPQGIIRMEGIIRKKCEMVQKIAGGDTYERMMMVQFSILQEAAYRFTPTMNKLTHNV
Ga0244775_1045791313300024346EstuarineMINEVTKVFSDMSNEELVQVIQEMKEDNPQGIVRMGGVVREKCKMVQEIVGGNAYEQMMMVQFSILQEAAYRFTPTM
Ga0244776_1011428633300024348EstuarineMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRTDGIIRDKCKMVHEIVGGGVYEHMLMVQVSILQEAAYRFTPTL
Ga0208784_123557423300025732AqueousMTNKVTKIFSDMTDEELVLVIDEMREDDPQGIIRENGIVRSKCKMVHAIVGGNVYEHLTMVQVSILKEAAYRFTPTMDELTHNV
Ga0255074_101133813300027121FreshwaterMTDEELVLVIDEMREDDPQGIIRENGIVRSKCKMVHDIVGGNTYEHLTMVQVSILRESAYRFTPTMDELTHNV
Ga0255090_102895413300027123FreshwaterMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGVIRDKCRMVHEIVGGGVYDHMLMVQLSILQEAAYRFTPTL
Ga0255069_104055613300027134FreshwaterMYICGMNNQVTKIFTDMTDMELSQVITELKEDSPQGIIRMDGVIRDKCRMVHEIVGGGVYDHMLMVQLSILQEAAYRFTPTL
Ga0255078_100693663300027156FreshwaterMINKVTKIFSDMTDEELVLVIDEMREDDPQGIIRENGIVRSKCKMVHDIVGGNTYEHLTMVQVSILRESAYRFTPTMDELTHNV
Ga0208975_120951013300027659Freshwater LenticMNNQVTKIFTDMTDMELSQVITELKEDSPQGIIRTDGVIRDKCKMVHEIVGGGVYEHMLMVQVSILQEAAYRFTPTL
Ga0209188_101328783300027708Freshwater LakeMANAITNIFSNMTDLELSQAIIEMKEDESIGIIREDGVVRKKCKMVNKITGGNVYEHQTMVQHSILQEAAYRFTPKI
Ga0209599_1007834533300027710Deep SubsurfaceMVNEVTKVFSEMSDEELAQVIQEMKEDGPYGIIRMEGIIREKCHLVQKIAGGDTYERMMMVQFSILQEAAYRFTPTMEEIKK
Ga0209599_1020081723300027710Deep SubsurfaceMVNEVTKVFSEMSDEELAQVIQEMKEDGPQGIIRMEGIIREKCKMVQKIAGGETYERMMMVQFSILQEAAYRFTPTMDELTHNV
Ga0209499_1000092463300027712Freshwater LakeMANAITNIYSNMTDSELSQAIKEMKEDAPTGIIRENGIVREKCKMVNKITGGNVYEHQMSVQFSILQEAAYRFTPKI
Ga0209296_130975613300027759Freshwater LakeMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGVVRQKCRMVHEIVGGGLYDHMLMVQLSILQEAAYRFTPTL
Ga0209296_135174123300027759Freshwater LakeMINEVTKVFSDMTNEELVQVIQEMKEDNPQGIVRMGGVVREKCKMVQEIVGGNAYEQMMMVQFSILQEAAYRFTPTM
Ga0209088_1016844123300027763Freshwater LakeMANAITNIFSNMTDLELSQAIKEMKEDESIGIIREDGVVRKKCKMVNKITGGNVYEHQTMVQHSILREAAYRFTPKI
Ga0209229_1000770993300027805Freshwater And SedimentMTNKVTKIFSDMTDEELVLVIAEMKEDDPQGIIRENGIVRSKCKMVHNITGGNIYEHLMMVQISIIKEAAYRFTPTMDELTHTV
Ga0209820_107851323300027956Freshwater SedimentLSXLLKINKNMANEVTKVFSDMSNEELVQVIQEMKEDSPQGIIRMEGIIREKCKMVHKIVGGNVYEHMVMVQYSILQEAAYRFTPTMDELTHNV
(restricted) Ga0247843_120519323300028569FreshwaterMNPVTKIFTDMDNSELIQAIQEMKEDGPQGIIRSGGVVRKKCNEVHKIVGGNIYEHLVMVQSSILQEAAYRFTPTIDELNETISI
(restricted) Ga0247844_129124113300028571FreshwaterMNPVTKIFTDMDNSELIQAIQEMKEDGPQGIIRSGGVVRKKCNEVHKIVGGNIYEHLVMVQSSIL
Ga0315899_1133759513300031784FreshwaterMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGVIRDKCRMVHEIVGGGLYDHMLMVQLSILQEA
Ga0315908_1108793713300031786FreshwaterMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRTDGVIRNKCKMVHEIVGGGVYEHMLMVQVSILQEAAY
Ga0315909_1013566223300031857FreshwaterMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGVIRDKCRMVHEIVGGGVYDHMLMVQLSIIQEAAYRFTPTL
Ga0315904_1033834633300031951FreshwaterMTNKVTKIFSDMTDEELVLVIAEMKEDDPQGIIRENGIVRSKCKMVHDIMGGNTYEHLMMVQISIMKEAAYRFTPTMDELTHNV
Ga0315904_1119828413300031951FreshwaterMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRTDGIIRDKCKMVHEIVGGGVYEHMLMVQVSI
Ga0315901_1060533213300031963FreshwaterPASLRFGIVKCIIYICGMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRTDGIIRDKCKMVHEIVGGGVYEHMLMVQVSILQEAAYRFTPTL
Ga0334987_0038252_907_11403300034061FreshwaterMINEVTKVFTDITDVELSQAIREMKEDESKGIIREQGIVRAKCKMVHAIVGGNVYEHLMMVQFSILREAAHRFTPNY
Ga0335020_0362824_173_4063300034082FreshwaterMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGVIRDKCRMVHEIVGGGVYDHMLMVQVSILQEAAYRFTPTL
Ga0335012_0004760_7479_77333300034093FreshwaterMVNEITKVFSEMTDGELSQVIQEMKEDGPQGIIRMEGIVREKCKMIQNIVGGDTYERIMMVQFSILQEAAYRFTPTMEELTHNV
Ga0335033_0606681_129_3623300034117FreshwaterMNNQVTKIFTDMTDMELSQVITEIKEDSPQGIIRMDGVIRDKCRMVHEIVGGGVYDHLLMVQLSILQEAAYRFTPKL
Ga0335048_0135010_191_4453300034356FreshwaterMVNEITKVFSDMSNEELAQVIQEMKEDGPQGIIRMEGIIREKCNMIQKIVGGDTYERIMMVQFSILQEAAYRFTPTMDELTHNV


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.