Metagenome / Metatranscriptome Family F097306

Basic Information
Family ID	F097306
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	47 residues
Representative Sequence	YLTGTPPEIVDKLRARMAIGVEYLILHTLEPSTAQLDLWAEHVLPHLGL
Number of Associated Samples	92
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	95.19 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Most Common Taxonomy
Group	Bacteria (88.462 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.538 % of family members)
Environment Ontology (ENVO)	Unclassified (46.154 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (38.462 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.05% β-sheet: 0.00% Coil/Unstructured: 51.95%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF02056	Glyco_hydro_4	57.69
PF11975	Glyco_hydro_4C	38.46
PF02633	Creatininase	0.96
PF13416	SBP_bac_8	0.96
PF02446	Glyco_hydro_77	0.96
PF00528	BPD_transp_1	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1486	Alpha-galactosidase/6-phospho-beta-glucosidase, family 4 of glycosyl hydrolase	Carbohydrate transport and metabolism [G]	57.69
COG1402	Creatinine amidohydrolase/Fe(II)-dependent FAPy formamide hydrolase (riboflavin and F420 biosynthesis)	Coenzyme transport and metabolism [H]	0.96
COG1640	4-alpha-glucanotransferase	Carbohydrate transport and metabolism [G]	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.46 %
Unclassified	root	N/A	11.54 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.46 %
Unclassified	root	N/A	11.54 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.46 %
Unclassified	root	N/A	11.54 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	76.92 %
Unclassified	root	N/A	11.54 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	59.62 %
Unclassified	root	N/A	11.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.54 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.54 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4.81 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.54 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	3.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.54 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	3.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005335\|Ga0070666_11089178	All Organisms → cellular organisms → Bacteria → Terrabacteria group	594	Open in IMG/M
3300005363\|Ga0008090_15238721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	561	Open in IMG/M
3300005434\|Ga0070709_11011713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	661	Open in IMG/M
3300005435\|Ga0070714_101162631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	752	Open in IMG/M
3300005445\|Ga0070708_101267448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	689	Open in IMG/M
3300005471\|Ga0070698_100529734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1117	Open in IMG/M
3300005518\|Ga0070699_101175760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	704	Open in IMG/M
3300005539\|Ga0068853_101641547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	623	Open in IMG/M
3300005547\|Ga0070693_100294935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1091	Open in IMG/M
3300005713\|Ga0066905_100122453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1818	Open in IMG/M
3300005713\|Ga0066905_100274676	Not Available	1309	Open in IMG/M
3300005764\|Ga0066903_102992848	All Organisms → cellular organisms → Bacteria → Terrabacteria group	916	Open in IMG/M
3300005937\|Ga0081455_10888493	Not Available	555	Open in IMG/M
3300006028\|Ga0070717_10159244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1958	Open in IMG/M
3300006572\|Ga0074051_10013299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	851	Open in IMG/M
3300006573\|Ga0074055_11839017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1026	Open in IMG/M
3300006603\|Ga0074064_11587688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	526	Open in IMG/M
3300006806\|Ga0079220_10423439	All Organisms → cellular organisms → Bacteria → Terrabacteria group	879	Open in IMG/M
3300006903\|Ga0075426_10171617	Not Available	1568	Open in IMG/M
3300006904\|Ga0075424_100262826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1835	Open in IMG/M
3300010046\|Ga0126384_12173013	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300010322\|Ga0134084_10356934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	559	Open in IMG/M
3300010360\|Ga0126372_11811557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	654	Open in IMG/M
3300010366\|Ga0126379_10412652	Not Available	1401	Open in IMG/M
3300010375\|Ga0105239_10619452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1235	Open in IMG/M
3300010376\|Ga0126381_102101387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	813	Open in IMG/M
3300012207\|Ga0137381_11499743	All Organisms → cellular organisms → Bacteria → Terrabacteria group	566	Open in IMG/M
3300012354\|Ga0137366_10215786	Not Available	1429	Open in IMG/M
3300012355\|Ga0137369_10585056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	778	Open in IMG/M
3300012960\|Ga0164301_10187319	Not Available	1306	Open in IMG/M
3300012961\|Ga0164302_11776554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	520	Open in IMG/M
3300012984\|Ga0164309_10230691	Not Available	1293	Open in IMG/M
3300013104\|Ga0157370_10219759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1760	Open in IMG/M
3300014968\|Ga0157379_11232066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	721	Open in IMG/M
3300016270\|Ga0182036_10981024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	696	Open in IMG/M
3300016294\|Ga0182041_10265268	Not Available	1406	Open in IMG/M
3300016319\|Ga0182033_11763091	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300016357\|Ga0182032_10965064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	727	Open in IMG/M
3300016357\|Ga0182032_11431582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	599	Open in IMG/M
3300016404\|Ga0182037_10855328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	787	Open in IMG/M
3300016422\|Ga0182039_10543969	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1008	Open in IMG/M
3300016445\|Ga0182038_11987756	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300017947\|Ga0187785_10454876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	628	Open in IMG/M
3300017966\|Ga0187776_11029186	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300017973\|Ga0187780_10958052	All Organisms → cellular organisms → Bacteria → Terrabacteria group	623	Open in IMG/M
3300018060\|Ga0187765_10016790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3413	Open in IMG/M
3300021407\|Ga0210383_10379314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1219	Open in IMG/M
3300021478\|Ga0210402_10078296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	2936	Open in IMG/M
3300021560\|Ga0126371_13066829	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300025903\|Ga0207680_11003833	All Organisms → cellular organisms → Bacteria → Terrabacteria group	598	Open in IMG/M
3300025906\|Ga0207699_11292388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	540	Open in IMG/M
3300025910\|Ga0207684_11002556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	699	Open in IMG/M
3300025917\|Ga0207660_11261402	All Organisms → cellular organisms → Bacteria → Terrabacteria group	601	Open in IMG/M
3300025928\|Ga0207700_10272469	Not Available	1453	Open in IMG/M
3300025972\|Ga0207668_11093881	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300026023\|Ga0207677_11171594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	703	Open in IMG/M
3300027855\|Ga0209693_10203887	All Organisms → cellular organisms → Bacteria → Terrabacteria group	973	Open in IMG/M
3300027882\|Ga0209590_10472426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	810	Open in IMG/M
3300028768\|Ga0307280_10075602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1090	Open in IMG/M
3300028819\|Ga0307296_10079121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1752	Open in IMG/M
3300031170\|Ga0307498_10103103	All Organisms → cellular organisms → Bacteria → Terrabacteria group	881	Open in IMG/M
3300031226\|Ga0307497_10171997	All Organisms → cellular organisms → Bacteria → Terrabacteria group	917	Open in IMG/M
3300031545\|Ga0318541_10338314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	840	Open in IMG/M
3300031573\|Ga0310915_10020857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	3980	Open in IMG/M
3300031573\|Ga0310915_11234677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	516	Open in IMG/M
3300031640\|Ga0318555_10600315	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300031668\|Ga0318542_10215129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	972	Open in IMG/M
3300031720\|Ga0307469_11056573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	761	Open in IMG/M
3300031723\|Ga0318493_10528289	All Organisms → cellular organisms → Bacteria → Terrabacteria group	654	Open in IMG/M
3300031736\|Ga0318501_10414120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	729	Open in IMG/M
3300031736\|Ga0318501_10579977	Not Available	615	Open in IMG/M
3300031744\|Ga0306918_10421091	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1042	Open in IMG/M
3300031744\|Ga0306918_11498902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	515	Open in IMG/M
3300031747\|Ga0318502_10455232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	764	Open in IMG/M
3300031763\|Ga0318537_10183127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	780	Open in IMG/M
3300031763\|Ga0318537_10386455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	516	Open in IMG/M
3300031764\|Ga0318535_10109356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1215	Open in IMG/M
3300031768\|Ga0318509_10296103	All Organisms → cellular organisms → Bacteria → Terrabacteria group	905	Open in IMG/M
3300031770\|Ga0318521_10712701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	609	Open in IMG/M
3300031777\|Ga0318543_10433362	Not Available	589	Open in IMG/M
3300031778\|Ga0318498_10152419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1052	Open in IMG/M
3300031781\|Ga0318547_10836828	All Organisms → cellular organisms → Bacteria → Terrabacteria group	574	Open in IMG/M
3300031781\|Ga0318547_10856234	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300031781\|Ga0318547_10968337	All Organisms → cellular organisms → Bacteria → Terrabacteria group	531	Open in IMG/M
3300031782\|Ga0318552_10017537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	3118	Open in IMG/M
3300031782\|Ga0318552_10419495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	682	Open in IMG/M
3300031797\|Ga0318550_10264983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	834	Open in IMG/M
3300031799\|Ga0318565_10400349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	665	Open in IMG/M
3300031819\|Ga0318568_10030006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3027	Open in IMG/M
3300031833\|Ga0310917_10755656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	657	Open in IMG/M
3300031896\|Ga0318551_10061842	All Organisms → cellular organisms → Bacteria	1917	Open in IMG/M
3300031945\|Ga0310913_11131391	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300031954\|Ga0306926_11372028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	821	Open in IMG/M
3300031954\|Ga0306926_12067001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	638	Open in IMG/M
3300031981\|Ga0318531_10111669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1209	Open in IMG/M
3300031981\|Ga0318531_10364828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	653	Open in IMG/M
3300031981\|Ga0318531_10443958	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300032009\|Ga0318563_10664170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	560	Open in IMG/M
3300032035\|Ga0310911_10890744	All Organisms → cellular organisms → Bacteria → Terrabacteria group	513	Open in IMG/M
3300032041\|Ga0318549_10576409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	505	Open in IMG/M
3300032043\|Ga0318556_10261823	All Organisms → cellular organisms → Bacteria → Terrabacteria group	903	Open in IMG/M
3300032054\|Ga0318570_10481052	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300032066\|Ga0318514_10639874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	566	Open in IMG/M
3300032805\|Ga0335078_10668987	Not Available	1294	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.42%
Host-Associated	Host-Associated	10.58%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.42%
Plants	Host-Associated → Plants	10.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.19%
Loam	Environmental → Terrestrial → Soil → Loam	14.42%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.81%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.88%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	49.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.58%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.96%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.96%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006603	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070666_110891781	3300005335	Switchgrass Rhizosphere	LTGTPPEIVDKLRARMATGIEYLILHTLEPSAAQLDLWAEHVLPHLEA*
Ga0008090_152387212	3300005363	Tropical Rainforest Soil	PFEYFEQVYLTGTPAEIVEKLRARMAIGIEYLILHTLEPSTAQLDLWAEHVLPGLEV*
Ga0070709_110117131	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	EIVEKLQARMAIGVEYLILHTLEPSTAQLELWAEHVLPHLAA*
Ga0070714_1011626311	3300005435	Agricultural Soil	FEQVYLTGTPAEIVEKLRARMAIGVEYLILHTLEPSTAQLDLWAEHVLPHLHLGD*
Ga0070708_1012674481	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VYLTGTPSEILDKLRARVAIGIEYLILHTLQPSTAQLDLWAEHLLPHLGVS*
Ga0070698_1005297341	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	GGRPFEYFEHVNLTGTPSEIVAKLRARIAIGIEYLILHTLQPSTVQLDLWAEHLLPHLDV
Ga0070699_1011757602	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	EQVYLTGTPPEIVDKLRARMATGIEYLILHTLEPSAAQLDLWAEHVLPHLEA*
Ga0068853_1016415471	3300005539	Corn Rhizosphere	GTPAEIVDKLRARIAIGIEYLILHTLQPSASQLDLWAEHVLPYLEL*
Ga0070693_1002949351	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	YLTGTPPEIVDKLRARMATGIEYLILHTLEPSAAQLDLWAEHVLPHLET*
Ga0066905_1001224533	3300005713	Tropical Forest Soil	EIVEKLRARMAIGVDYLILHTLEPRAAQLDLWAEHVLPHLEV*
Ga0066905_1002746761	3300005713	Tropical Forest Soil	FEYFEQVYLTGTPSEIVDKLRARIAIGVEYLILHTLEPSPAQLDLWAEHVLPQLAA*
Ga0066903_1029928482	3300005764	Tropical Forest Soil	RMAIGVEYLILHTLEPSTAQLNLWAEHVLPKLAV*
Ga0081455_108884931	3300005937	Tabebuia Heterophylla Rhizosphere	IRARLATGVTHLMLHTLEPSVRQLELWAEQLLPGLVTV*
Ga0070717_101592441	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	FEYFEQVYLTGTPAEIVDKLRARIAIGIEYLILHTLQPSASQLDLWAEHVLPYLEL*
Ga0074051_100132991	3300006572	Soil	EYFEQVYLTGTPSEIVEKLRARIAIGVEYLILHTLQPSTAQLDLWAEHVLPHLEV*
Ga0074055_118390172	3300006573	Soil	IVEKLRARIAIGVEYLILHTLQPSTAQLDLWAEHVLPHLEV*
Ga0074064_115876882	3300006603	Soil	VEKLRARAAVGIEYLILHTLEPSADQLDLWAEHVLPHLEA*
Ga0079220_104234391	3300006806	Agricultural Soil	SEIVEKLRARVAIGVEYLMLHTLQPSPAQLDLWAEHVLPHLEV*
Ga0075426_101716172	3300006903	Populus Rhizosphere	RPFEYFEQVYMTGTPAEIVDKLRARIAIGIEYLILHTLEPSVSQLDLWAEHVLPYLEL*
Ga0075424_1002628263	3300006904	Populus Rhizosphere	GGGRPFEYFEQVYLTGTPSEVVEKLQARIAIGVEYLILHTLHPSAAQLDLWAEHVLPHLEL*
Ga0126384_121730132	3300010046	Tropical Forest Soil	VEKLRARMAIGVEYLILHTLEPQVAQLDLWAEHVLPRLAA*
Ga0134084_103569342	3300010322	Grasslands Soil	PFEYFEQVYLTGTLSEIVGKLRARRAIGIEYLILHTLQPSTEQLDLWAKHLLPHLEVW*
Ga0126372_118115572	3300010360	Tropical Forest Soil	YLTGTPSEIVEKLRARIAIGVEYLILHTLQPSAAQLDLWAEHVLPHLEA*
Ga0126379_104126521	3300010366	Tropical Forest Soil	LQARIAIGVEYLILHTLQPSAAQLDLWAEYVLPHLEA*
Ga0105239_106194521	3300010375	Corn Rhizosphere	EILEKLRARMAIGIEYLILHTLEPSTAQLDLWAEHLLPHLAV*
Ga0126381_1021013872	3300010376	Tropical Forest Soil	GDGRPFEYFEQVYLTGTPAEIVEKLRARIAIGVEYLILHTLQPSAAQLDLWAEHVLPCLEA*
Ga0137381_114997431	3300012207	Vadose Zone Soil	PFEYFEQVYLTGTPAEIVDKLRARIAIGIEYLILHTLRPSTSQLDLWAEHVLPHLEI*
Ga0137366_102157862	3300012354	Vadose Zone Soil	TGTPSEIVAKLRARMAIGVDYLILHTLEPSTAQLDLWAEHVLPHLGA*
Ga0137369_105850561	3300012355	Vadose Zone Soil	ARIAIGIEYLILHTLQPSTAQLELWAEHLLPHLEI*
Ga0164301_101873191	3300012960	Soil	EIVDKLRARIDIGIEYLILHTLQPSASQLDLWAEHVLPYLEA*
Ga0164302_117765541	3300012961	Soil	PSEIVEKLRARMATGIEYLILHTLEPSAAQLDLWAEHVLSHLEA*
Ga0164309_102306912	3300012984	Soil	TGTPPEIVDKLRARMATGIEYLILHTLEPSAAQLDLWAEHVLPHLET*
Ga0157370_102197593	3300013104	Corn Rhizosphere	AEIVDKLRARIAIGIEYLILHTLQPSASQLDLWAEHVLPYLEL*
Ga0157379_112320662	3300014968	Switchgrass Rhizosphere	RMAIGVEYLILHTLEPSTAQLELWAEHVLPHLAA*
Ga0182036_109810241	3300016270	Soil	EIVEKLRARMAIGVEYLILHTLQPSTAQLDLWAEHVLPHLEV
Ga0182041_102652682	3300016294	Soil	LRARMAIGVEYLILHTLQPSTAQLDLWAEHVLPHLEV
Ga0182033_117630912	3300016319	Soil	GRMAIGVEYLILHTLEPSTAQLNLWAEHVLPQLAV
Ga0182032_109650641	3300016357	Soil	KLRARLAVGIEYLILHTLEPSTKQLDLWAEHGLPHLGL
Ga0182032_114315821	3300016357	Soil	GRTFEYFEQVYLTGTPSEIVEKLRARMVMGVEYLILHTLEPSTAQLDLWAEHVLPHLEL
Ga0182037_108553281	3300016404	Soil	TGTPSEIVDKLRARMAIGVEYLILHTLEPSVKQLDLWAEHVLPHLGL
Ga0182039_105439692	3300016422	Soil	EQVYLTGTPSEIVDKLRARMAIGVEYLILHTLEPSTKQLDLWAEYGLPHLGL
Ga0182038_119877561	3300016445	Soil	IVDKLRARLAVGIEYLILHTLEPSPAQLDLWAEHVLPHLEA
Ga0187785_104548761	3300017947	Tropical Peatland	KLRARLAIGVEYLILHTLEPSTAQLDLWAEHVLPHLGL
Ga0187776_110291861	3300017966	Tropical Peatland	TPSEIVEKLRARMAIGVEYLILHTLEPSPAQLDLWAEHVLPHLAA
Ga0187780_109580521	3300017973	Tropical Peatland	GTPPEIVEKIRARMAIGVEYLILHTLEPSPAQLDLWAQHVLPHLELR
Ga0187765_100167901	3300018060	Tropical Peatland	EIVEKIRARMAIGVEYLILHTLEPSTAQLDLWAQHVLPHLGL
Ga0210383_103793142	3300021407	Soil	YLTGTPVEIVEKLQARMAIGVEYLILHTLEPSTAQLDLWAEHVLPHLAV
Ga0210402_100782961	3300021478	Soil	AEIVEKLRARMAIGVEYLILHTLEPSTAQLDLWAEHVLPHLGV
Ga0126371_130668292	3300021560	Tropical Forest Soil	GTPAEIVEKLRARIAIGVEYLILHTLQPSVAQLDLWAEHVLPQLEA
Ga0207680_110038332	3300025903	Switchgrass Rhizosphere	VYLTGTPAEIVDKLRARIAIGIEYLILHTLQPSASQLDLWAEHVLPYLEL
Ga0207699_112923882	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	EYFEQVYLTGTPAEIVDKLRARIDIGIEYLILHTLQPSASQLDLWAEHVLPYLEA
Ga0207684_110025561	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	PSEILDKLRARVAIGIEYLILHTLQPSTAQLDLWAEHLLPHLGVS
Ga0207660_112614021	3300025917	Corn Rhizosphere	YFEQVYLTGTPPEIVDKLRARMATGIEYLILHTLEPSAAQLDLWAEHVLPHLEA
Ga0207700_102724691	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	YMTGTPAEIVDKLRARIAIGIEYLILHTLEPSVSQLDLWAEHVLPYLEL
Ga0207668_110938812	3300025972	Switchgrass Rhizosphere	KLRARMAIGIEYLILHTLEPSTAQLDLWAEHLLPHLAV
Ga0207677_111715941	3300026023	Miscanthus Rhizosphere	SRPFEYFEQVYLTGTPAEIVDKLRARIAIGIEYLILHTLQPSASQLDLWAEHVLPYLEL
Ga0209693_102038871	3300027855	Soil	YFEQVYLTGTPSEIVEKLQARMAIGVEYLILHTLEPSTAQLDLWAEHVLPHLVA
Ga0209590_104724261	3300027882	Vadose Zone Soil	ARTAIGIEYLILHTLQPSTAQLELWAEHLLPHLEIW
Ga0307280_100756022	3300028768	Soil	LEKLRARMAIGIEYLILHTLEPSTAQLDLWAEHLLPHLAV
Ga0307296_100791213	3300028819	Soil	LTGTPSEIVEKLRARIAIGVEYLVLHTLQPSTAQLDLWAEHVLPHLAV
Ga0307498_101031031	3300031170	Soil	FEQVYLTGTPSEVVDKLRARMAIGVEYLILHTLEPSTAQLDLWAEHVLPHLGD
Ga0307497_101719971	3300031226	Soil	GTPSEVVDKLRARIAVGIEYLILHTLEPSAAQLDLWAEHVLPHLGD
Ga0318541_103383142	3300031545	Soil	YLTGTPQEIVDKLRARMAIGVEYLILHTLEPSTAQLDLWAEHVLPHLVA
Ga0310915_100208575	3300031573	Soil	TPSEIVEKLRARMAMGVGYLILHTLEPSTAQLDLWAEHVLPHLEL
Ga0310915_112346771	3300031573	Soil	VEKLRARMAIGVEYLILHTLEPSTAQLDLWAEHILPDLEA
Ga0318555_106003152	3300031640	Soil	VYLTGTPSQIVDKLRARMAIGVEYLILHTLEPSVKQLDLWAEHVLPHLGL
Ga0318542_102151292	3300031668	Soil	GRPFEYFEQVYLTGTPSEIVEKLRARMAIGVEYLILHTLQPATAQLDLWAEHVLPHLEV
Ga0307469_110565732	3300031720	Hardwood Forest Soil	YLTGTPAEIVDKLRARIAIGIEYLILHTLQPSASQLDLWAEHVLPYLEL
Ga0318493_105282891	3300031723	Soil	YFEQVYLTGTPAEIVEKLRARMAIGVEYLILHTLEPSTAQLDLWAEHVLPHLEA
Ga0318501_104141201	3300031736	Soil	VYLTGTPSEIVDKLRARMAIGVEYLILHTLEPSTKQLDLWAEHGLPHLGL
Ga0318501_105799772	3300031736	Soil	TPQEILDKLRARMAIGVEYLILHTLEPSTAQLDLWAEHVLPHLVA
Ga0306918_104210911	3300031744	Soil	GGGRPFEYFEQVYLTGTPAEIVDKLRARMAIGAEYLILHTLEPSTRQLDLWAEHVLPHLG
Ga0306918_114989022	3300031744	Soil	YLTGTPPEIVDKLRARMAIGVEYLILHTLEPSTAQLDLWAEHVLPHLGL
Ga0318502_104552321	3300031747	Soil	LRARLAIGAEYLILHTLEPSTRQLDLWAEHVLPHLGL
Ga0318537_101831272	3300031763	Soil	VYLTGTPSEIVEKLRARMAIGVEYLILHTLQPSTAQLDLWAEHVLPHLEV
Ga0318537_103864551	3300031763	Soil	EKLRARMAMGVEYLILHTLEPSTAQLDLWAEHVLPHLEL
Ga0318535_101093562	3300031764	Soil	LTGTPSQIVDKLRARMAIGVEYLILHTLEPSVKQLDLWAEHVLPHLGL
Ga0318509_102961032	3300031768	Soil	YLTGTPSQIVDKLRARMAIGVEYLILHTLEPSTKQLDLWAEYGLPHLGL
Ga0318521_107127011	3300031770	Soil	EYFEQVYLTGTPSEIVEKLRARMAIGVEYLILHTLQPATAQLDLWAEHVLPHLEV
Ga0318543_104333621	3300031777	Soil	VYLTGTPSEIVDKLRARMAIGVEYLILHTLEPSTKQLDLWAEYGLPHLGL
Ga0318498_101524191	3300031778	Soil	SEIVDKLRARLAIGIEYLILHTLEPSPAQLDLWAEHVLPHLEA
Ga0318547_108368282	3300031781	Soil	GRPFEYFEQVYLTGTPSEIVDKLRARMAIGVEYLILHTLEPSVKQLDLWAEHVLPHLGL
Ga0318547_108562341	3300031781	Soil	YFEQVYLTGTPTEIVAKLRARMAIGVEYLILHTLEPSTAQLNLWAEHVLPQLAV
Ga0318547_109683372	3300031781	Soil	VDKLRARLAIGIEYLILHTLEPSPAQLDLWAEHVLPHLEA
Ga0318552_100175374	3300031782	Soil	GTPAEIVEKLRARMAIGVEYLILHTLEPSTAQLDLWAEHILPDLEA
Ga0318552_104194951	3300031782	Soil	YFEQVYLTGTPSEIVEKLRARVAIGVEYLILHTLQPSTAQLDLWAEHVLPHLEV
Ga0318550_102649831	3300031797	Soil	EIVEKLRARMAIGVEYLILHTLEPSTAQLDLWAEHILPDLEA
Ga0318565_104003491	3300031799	Soil	VYLTGTPSEIVEQLRARMAIGVEYLILHTLQPSTAQLDLWAEHVLPHLEV
Ga0318568_100300064	3300031819	Soil	LTGTPPEIVDKLRARMAIGVEYLILHTLEPSTAQLDLWAEHVLPHLVA
Ga0310917_107556561	3300031833	Soil	VYLPGTPSEIVEKLRARMAIGVEYLILHTLQPSTAQLDLWAEHVLPHLEV
Ga0318551_100618423	3300031896	Soil	KLRGRMAIGVEYLILHTLEPSTAQLNLWAEHVLPQLAV
Ga0310913_111313911	3300031945	Soil	AEIVEKLRARMAIGVEYLILHTLEPSTAQLNLWAEHVLPQLAV
Ga0306926_113720281	3300031954	Soil	EIVDKLRARMAIGVEYLILHTLEPSTAQLDLWAEHVLPHLVA
Ga0306926_120670012	3300031954	Soil	RARMVMGVEYLILHTLEPSTAQLDLWAEHVLPHLEL
Ga0318531_101116692	3300031981	Soil	EQVYLTGTPSEIVAKLQARMAIGVEYLILHTLQPSTAQLDLWAEHVLPHLGL
Ga0318531_103648281	3300031981	Soil	VYLTGTPSEIVDKLRARLAIGIEYLILHTLEPSPAQLDLWAEHVLPHLEA
Ga0318531_104439582	3300031981	Soil	VYLTGTPQEIVDKLRARMAIGVEYLILHTLEPSTAQLDLWAEHVLPHLVA
Ga0318563_106641702	3300032009	Soil	PFEYFEQVYLTGTPSEIVEKLRARMAIGVEYLILHTLQPSTAQLDLWAEHVLPHLEV
Ga0310911_108907441	3300032035	Soil	SEIVGKLRARMAIGVEYLILHTLQASTAQLDLWAEHVLPHLAA
Ga0318549_105764091	3300032041	Soil	LTGTPSEIVDKLRARLAVGIEYLILHTLEPSPAQLDLWAEHVLPHLEA
Ga0318556_102618231	3300032043	Soil	VDKLRARMAIGVEYLILHTLEPSVKQLDLWAEHVLPHLGL
Ga0318570_104810521	3300032054	Soil	YLTGTPAEIVDKLRARMAIGAEYLILHTLEPSTRQLDLWAEHVLPHLGI
Ga0318514_106398741	3300032066	Soil	PSEIVEKLRARMAIGVEYLILHTLQPATAQLDLWAEHVLPHLEV
Ga0335078_106689872	3300032805	Soil	YFEQVYLTGTPPEIVDKLRARIATGIEYLILHTLEPGAAQLDLWAEHVLPQLGA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097306

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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