Metagenome / Metatranscriptome Family F097300

Basic Information
Family ID	F097300
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	94 residues
Representative Sequence	LRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQEGTRRPPTG
Number of Associated Samples	93
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.462 % of family members)
Environment Ontology (ENVO)	Unclassified (49.038 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.846 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 70.79% β-sheet: 0.00% Coil/Unstructured: 29.21%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00589	Phage_integrase	10.58
PF03476	MOSC_N	4.81
PF07883	Cupin_2	2.88
PF00027	cNMP_binding	0.96
PF07690	MFS_1	0.96
PF13011	LZ_Tnp_IS481	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG3217	N-hydroxylaminopurine reductase subunit YcbX, contains MOSC domain	Defense mechanisms [V]	4.81

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	52.88%
Host-Associated	Host-Associated	47.12%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	47.12%
Terrestrial	Environmental → Terrestrial	46.15%
Aquatic	Environmental → Aquatic	6.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	45.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.27%
Marine	Environmental → Aquatic → Marine	3.85%
Freshwater	Environmental → Aquatic → Freshwater	2.88%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.96%
Roots	Host-Associated → Plants → Roots	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.35%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.38%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.54%
Loam	Environmental → Terrestrial → Soil → Loam	6.73%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.88%
Ice	Environmental → Aquatic → Freshwater → Ice	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.96%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.96%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.96%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.54%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.73%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.96%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.96%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.96%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	7.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.81%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.85%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.88%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.88%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.88%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.96%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.96%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.96%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.96%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001989	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5	Host-Associated	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014270	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1	Environmental	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300014310	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_TuleA_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300022880	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300022889	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4	Environmental	Open in IMG/M
3300022893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S126-311R-4	Environmental	Open in IMG/M
3300023067	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S221-509R-5	Environmental	Open in IMG/M
3300023269	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L092-311B-6	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_09460851	2228664021	Soil	ARLDELRAAEEAFLRTRRELADHTDAIAAREQLLAQRERELDEREDGWGGSDLHELESRLRRLETQRQTTQTGSFSGGFRRLEQEGSRRPPSK
JGIcombinedJ13530_1022290701	3300001213	Wetland	ETALDARARQIDARLAELEERERAIEERERIPPDPDALRLAQIDARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQDGTRRPPTG*
JGI24739J22299_102604471	3300001989	Corn Rhizosphere	EERERAVEERERIPPDPDAARLAQIDARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQDGTRRPPVG
Ga0055468_102216031	3300003993	Natural And Restored Wetlands	AEEAFMRTRRDLAEHSDAITAREQLLAQRERELDEREDSWGGPELRDLESRLRKLETQRLTAGQTSSFSGGIQKLEQQGTRRPPD*
Ga0055468_102416712	3300003993	Natural And Restored Wetlands	EARLDELRAAEEAFLRTRRELAEHTDAISAREQLLAQRERELDEREDGWGGPDLHELESRLRRLETQRQAAQTGSFSGGFRRLEQEGTRHPPSG*
Ga0055469_102923721	3300003999	Natural And Restored Wetlands	AFMRTRRDLAEHSDAITAREQLLAQRERELDEREDSWGGPELRDLESRLRKLETQRLTAGQTSSFSGGIQKLEQQGTRRPPD*
Ga0062593_1003290193	3300004114	Soil	LRAAEEAFLRTRRELAEHTDAISAREQLLAQRERELDEREDGWGGPDLHELESRLRRLETQRQAAQAGSFSGGFRRLEQEGTRHPPSQ*
Ga0063356_1035841981	3300004463	Arabidopsis Thaliana Rhizosphere	LAQIDARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTHGFSGGFRKLEQEGTRRPPAG*
Ga0062592_1016485181	3300004480	Soil	RRELAEHTDAISAREQLLAQRERELDEREDGWGGPDLHELESRLRRLETQRQTAQAGSFSGGFRRLEQEGTRHPPSQ*
Ga0066815_101153601	3300005164	Soil	DARARQIDARLAELEERERAIEERERIPPDPDAVRLAQIDARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQEGTRRPPTG*
Ga0066809_100791471	3300005168	Soil	FLRTRRELADHSDAIAAREQLLAQRERELDEREDGWGGPDVRELEARLRRLETQRTALEQTQGFSGGFRKLEQDGARRPPST*
Ga0070666_108991482	3300005335	Switchgrass Rhizosphere	AVRLAQIDARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQEGTRRPPTG*
Ga0070661_1003451043	3300005344	Corn Rhizosphere	RELAEHTDAISAREQLLAQRERELDEREDGWGGPDLHELESRLRRLETQRQAAQAGSFSGGFRRLEQEGTRHPPSQ*
Ga0070692_105919773	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	LRTRRELAEHTDAISAREQLLAQRERELDEREDGWGGADLQELESRLRRLETQRQATQTGSFSGGFRRLEQEGSRRPPPA*
Ga0070659_1000646197	3300005366	Corn Rhizosphere	EEAFLRTRRELAEHTDAISAREQLLAQRERELDEREDGWGGADLQELESRLRRLETQRQATQTGSFSGGFRRLEQEGSRRPPPA*
Ga0070659_1001458391	3300005366	Corn Rhizosphere	EERERIPPDPDAARLAQIDARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQDGTRRPPVG*
Ga0070667_1021278722	3300005367	Switchgrass Rhizosphere	DPDAARLAEIEARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQEGTRRPPAG*
Ga0070700_1012904231	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	AAEEAFMRTRRDLAEHTDAITAREQLLAQRERELDEREDSWGGPEIRDLESRLRRLETQRLTGEQTTRSFSGGFKKLEQEGTRKPQG*
Ga0070663_1011264602	3300005455	Corn Rhizosphere	DELRAVEEAFLRTRRELADHSDAIAAREQLLAQRERELDEREDGWGGPDVRELEARLRRLETQRTAHEQTQGFSGGFRKLEQDGARRPPST*
Ga0070686_1001358031	3300005544	Switchgrass Rhizosphere	PDPDAARLAQIDARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQDGTRRPPVG*
Ga0070695_1010886231	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VAAREAALASGATHGDGGSANGDPALAQREAALDARARQIDARLVELEERERAIEERERIPPDPDAVRLAQIDARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQEGTRRPPAG*
Ga0070664_1013265552	3300005564	Corn Rhizosphere	RAVEEAFLRTRRELADHSDAIAAREQLLAQRERELDEREDGWGGPDVRELEARLRRLETQRTAHEQTQGFSGGFRKLEQDGARRPPST*
Ga0068857_1005855651	3300005577	Corn Rhizosphere	AQIDARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQEGTRRPPTG*
Ga0068854_1005273051	3300005578	Corn Rhizosphere	ERIPPDPDAARLAQIDARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQDGTRRPPVG*
Ga0068859_1006034321	3300005617	Switchgrass Rhizosphere	RAEEAFLRTRRELAEHTDAISAREQLLAQRERELDKREDGWGGADLQELESRLRRLETQRQATQTGSFSGGFRRLEQEGSRRPPPA*
Ga0068866_102746391	3300005718	Miscanthus Rhizosphere	IEERERIPPDPNAARLAQIDARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQDGTRRPPVG*
Ga0074056_117855901	3300006574	Soil	QIDARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQEGTRRPPTG*
Ga0074053_117643171	3300006575	Soil	LRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQEGTRRPPTG*
Ga0074054_114595402	3300006579	Soil	LDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQEGTRRPPTG*
Ga0075430_1003831831	3300006846	Populus Rhizosphere	AEHTDAISAREQLLAQRERELDEREDGWGGPDLHELESRLRRLETQRQAAQAGSFSGGFRRLEQEGTRHPPSQ*
Ga0075431_1003439191	3300006847	Populus Rhizosphere	RLATLRDAEEAFLRTRRELADRSDALAARERMIAQRERELDERDDAWGGPDMHELEARLRRLERHGAPGDGPRSFSGGFRRLEQQGTRRAPDR*
Ga0068865_1002102881	3300006881	Miscanthus Rhizosphere	RLDELRAVEEAFLRTRRELADHSDAIAAREQLLAQRERELDEREDGWGGPDVRELEARLRRLETQRTAHEQTQGFSGGFRKLEQDGARRPPST*
Ga0068865_1011114251	3300006881	Miscanthus Rhizosphere	EEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQEGTRRPPTG*
Ga0079215_113731661	3300006894	Agricultural Soil	ETRLDELRAAEEAFLRTRRDLAEHSDAITGREQLLAQRERELDEREDGWGGPEFRDLESRLRRLETQRLTGDQTRSFSGGFRKLEEEGTRKPQG*
Ga0074063_140726442	3300006953	Soil	IDARLAELEERERAIEERERIPPDPDAVRLAQIDARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQEGTRRPPTG*
Ga0105251_104922202	3300009011	Switchgrass Rhizosphere	EEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQDGTRRPPVG*
Ga0111539_103139461	3300009094	Populus Rhizosphere	DAVRLAQIDARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQEGTRRPSTG*
Ga0111539_111411032	3300009094	Populus Rhizosphere	VEEAFLRTRRELADHSDAIAAREQLLAQRERELDEREDGWGGPDVRELEARLRRLETQRTAHEQTQGFSGGFRKLEQDGARRPPST*
Ga0105245_100236641	3300009098	Miscanthus Rhizosphere	TRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQDGTRRPPVG*
Ga0105104_102542713	3300009168	Freshwater Sediment	EIEARLDELRAAEEAFLRTRRELADHSDAITAREQLLAQRERELDEREDGWGGPDVRELEARLRRLETQGTALARTQGFSGGFRKLEQEGTRRPPSP*
Ga0105248_106808922	3300009177	Switchgrass Rhizosphere	LRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQDGTRRPPVG*
Ga0105238_128896271	3300009551	Corn Rhizosphere	VVDASLRTRRELADHSDAIAAREQLLAQRERELDEREDGWGGPDVRELEARLRRLETQRTAREQTQGFSGGFRKLEQDGARRPPST*
Ga0105239_106886931	3300010375	Corn Rhizosphere	TRRELAEHTDAISAREQLLAQRERELDEREDGWGGADLQELESRLRRLETQRQATQTGSFSGGFRRLEQEGSRRPPPA*
Ga0105239_120437882	3300010375	Corn Rhizosphere	RELADHSDASAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQEGTRRPPTG*
Ga0105246_101862661	3300011119	Miscanthus Rhizosphere	LRRAEEAFLRTRRELAEHTDAISAREQLLAQRERELDKREDGWGGADLQELESRLRRLETQRQATQTGSFSGGFRRLEQEGSRRPPPA*
Ga0157334_10320862	3300012509	Soil	TRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQEGTRRPPTG*
Ga0136635_102505001	3300012530	Polar Desert Sand	IESRLDELRAAEEAFLRTRRELAERSDAVDARERLATQRERELGERDDGWGGPDMQELEVRLRKLETQRPASGHARGFSGGFRRLEQEGSRRPQGG*
Ga0157285_102831511	3300012897	Soil	ERTPPDPDAARLAEIEARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERELDERDDGWGGADVRELEARLRKLETQRTSPGGTPGFSGGFRRLEQEGTRRPPSD*
Ga0157289_100084921	3300012903	Soil	ARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQDGTRRPPVG*
Ga0157295_100439771	3300012906	Soil	DELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERELDERDDGWGGADVRELEARLRRLETQRTAPGGTPGFSGGFRRLEQEGTRRPPSD*
Ga0157286_104170311	3300012908	Soil	TRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQDGTRRPPAG*
Ga0157301_102563901	3300012911	Soil	RRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQDGTRRPPVG*
Ga0157297_101565592	3300012914	Soil	RAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTHGFSGGFRKLEQEGTRRPPAG*
Ga0164299_109997392	3300012958	Soil	RTRRELADHSDAIAAREQLLAQRERELDEREDGWGGPDVRELEARLRRLETQRTALEQTQGFSGGFRKLEQDGARRPPST*
Ga0164304_106224743	3300012986	Soil	LRRAEEAFLRTRRELAEHTDAISAREQLLAQRERELDKREDGWGGADLQELESRLRRLETQRQATQTGSFSGGFRRLEQEGSRRPPPAEVGRHAHKDSSAQGLN*
Ga0164305_113335112	3300012989	Soil	ELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELESRLRKLETQGSALGQTRGFSGGFRKLEQEGTRRPPTG*
Ga0157370_101201796	3300013104	Corn Rhizosphere	ARLAQIDARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQDGTRRPPVG*
Ga0157369_107688792	3300013105	Corn Rhizosphere	PDPDAVRLAQIDARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQDGTRRPPVG*
Ga0157372_102669833	3300013307	Corn Rhizosphere	ARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQEGTRRPPTG*
Ga0075325_10432911	3300014270	Natural And Restored Wetlands	ALEARARELDARERELAERERIPPDPAGARLAEIEARLDELRAAEEAFLRTRRELADHTDAISAREQLLAQRERELDEREDGWGGPDLHELESRLRKLETQRQAGQTGSFSGGFRRLEQEGSRRPPSS*
Ga0075327_10335743	3300014272	Natural And Restored Wetlands	EARLDELRAAEEAFMRTRRDLAEHSDAITAREQLLAQRERELDEREDSWGGPELRDLESRLRKLETQRLTSGQTSSFSGGFQKLEQQGSRRPPS*
Ga0075331_11561621	3300014310	Natural And Restored Wetlands	LEARARELDARERELAERERIPPDPAGARLAEIEARLDELRAAEEAFLSTRRELADHTDAISAREQLLAQRERELDEREDGWGGPDLHELESRLRKLETQRQAGQTGSFSGGFRRLEQEGSRRPPSS*
Ga0163163_131588732	3300014325	Switchgrass Rhizosphere	AVRLAQIDARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQEGTRRPPAG*
Ga0157377_100312111	3300014745	Miscanthus Rhizosphere	RAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQDGTRRPPVG*
Ga0132256_1004523601	3300015372	Arabidopsis Rhizosphere	ELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQEGTRRPPAG*
Ga0132255_1005465061	3300015374	Arabidopsis Rhizosphere	AAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRRLETQRTALGQTQGFSGGFRKLEQDGARRPPST*
Ga0132255_1014387042	3300015374	Arabidopsis Rhizosphere	EEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQDGTRRPPTG*
Ga0136617_104615543	3300017789	Polar Desert Sand	ARLDELRAAEEAFLRTRRELSERSDAVDARERLASQRERELDERDDGWGGGPDMHEVEARLRRLESQRTTSEQTRSFSGGFRKLEQEGSRRPESR
Ga0163161_100638256	3300017792	Switchgrass Rhizosphere	VEERERIPPDPDAVRLAQIDARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQEGTRRPPTG
Ga0173482_101243182	3300019361	Soil	TRRELADHSDAIAAREQLLAQRERELDERDDGWGGADVRELEARLRRLETQRTAPGGTPGFSGGFRRLEQEGTRRPPSD
Ga0173482_101721961	3300019361	Soil	RIPPDPDAVRLAQIDARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQDGTRRPPVG
Ga0173479_100127556	3300019362	Soil	LRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQDGTRRPPVG
Ga0247792_10446351	3300022880	Soil	ELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQDGTRRPPVG
Ga0247786_10456611	3300022883	Soil	ARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQDGTRRPPVG
Ga0247785_10054843	3300022889	Soil	QIDARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQDGTRRPPVG
Ga0247787_10675131	3300022893	Soil	EEAFLRTRRELADHSDAISAREQLLAQRERELDERDDGWGGADVRELEARLRKLETQRTSPGGTGFSGGFRRLEQEGTRRPPSD
Ga0247743_10662362	3300023067	Soil	EEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQDGTRRPPVG
Ga0247773_11635912	3300023269	Plant Litter	ELEERERAIEERERIPPDPDAVRLAQIDARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQDGTRRPPVG
Ga0247794_101532322	3300024055	Soil	LRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQEGTRRPPAG
Ga0207697_104224932	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	VRLAQIDARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQDGTRRPPVG
Ga0207642_108960622	3300025899	Miscanthus Rhizosphere	ELRRAEEAFLRTRRELAEHTDAISAREQLLAQRERELDEREDSWGGPEIRDLESRLRRLETQRLTGEQTTRSFSGGFKKLEQEGTRKPQG
Ga0207660_103573371	3300025917	Corn Rhizosphere	TRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQEGTRRPPTG
Ga0207681_104624351	3300025923	Switchgrass Rhizosphere	RIPPDPDAARLAQIDARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQDGTRRPPVG
Ga0207687_112603612	3300025927	Miscanthus Rhizosphere	ADHSDAIAAREQLLAQRERELDEREDGWGGPDVRELEARLRRLETQRTAHEQTQGFSGGFRKLEQDGARRPPST
Ga0207687_119021071	3300025927	Miscanthus Rhizosphere	AFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQDGTRRPPVG
Ga0207669_101495143	3300025937	Miscanthus Rhizosphere	ERVPRDPDEARLAEIEARLDELRAVEEAFLRTRRELADHSDAIAAREQLLAQRERELDEREDGWGGPDVRELEARLRRLETQRTAHEQTQGFSGGFRKLEQDGARRPPST
Ga0207704_100738844	3300025938	Miscanthus Rhizosphere	EIEARLDELRAVEEAFLRTCRELADHSDAIAAREQLLAQRERELDEREDGWGGPDVRELEARLRRLETQRTAHEQTQGFSGGFRKLEQDGARRPPST
Ga0207704_110553462	3300025938	Miscanthus Rhizosphere	RDLAEHTDAITAREQLLAQRERELDEREDSWGGPEIRDLESRLRRLETQRLTGEQTTRSFSGGFKKLEQEGTRKPQG
Ga0207661_112787372	3300025944	Corn Rhizosphere	QIDARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQDGTRRPPTG
Ga0207661_113244802	3300025944	Corn Rhizosphere	DPDAARLAQIDARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQEGTRRPPAG
Ga0207668_121684001	3300025972	Switchgrass Rhizosphere	TRRDLAEHTDAITAREQLLAQRERELDEREDSWGGPEIRDLESRLRRLETQRLTGEQTTRSFSGGFKKLEQEGTRKPQG
Ga0207677_104914982	3300026023	Miscanthus Rhizosphere	LADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQDGTRRPPVG
Ga0207677_110972751	3300026023	Miscanthus Rhizosphere	LRAAEEAFLRTRRELAEHTDAISAREQLLAQRERELDEREDGWGGPDLHELESRLRRLETQRQTAQAGSFSGGFRRLEQEGTRHPPSQ
Ga0207683_101514275	3300026121	Miscanthus Rhizosphere	DHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQDGTRRPPVG
Ga0268264_118985521	3300028381	Switchgrass Rhizosphere	RTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQEGTRRPPTG
Ga0247821_101002213	3300028596	Soil	PPDPDAVRLAQIDARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQEGTRRPPTG
Ga0247826_109964582	3300030336	Soil	IEARLDELRAAEEAFLRTRRELAEHTDAISAREQLLAQRERELDEREDGWGGPDLHELESRLRRLETQRQTAQAGSFSGGFRRLEQEGTRHPPSQ
Ga0310887_103369591	3300031547	Soil	EAFMRTRRDLAEHTDAITAREQLLAQRERELDEREDSWGGPEIRDLESRLRRLETQRLTGEQTTRSFSGGFKKLEQEGTRKPQG
Ga0310813_120595981	3300031716	Soil	AARLAEIEARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERELDERDDGWGGADVRELEARLRRLETQRTAPGGTPGFSGGFRRLEQEGTRRPPSD
Ga0310900_106460282	3300031908	Soil	LDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQEGTRRPPTG
Ga0308175_1017336721	3300031938	Soil	LRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLERQRTALGQTQGFSGGFRKLEQDGTRRPPTG
Ga0310897_101139222	3300032003	Soil	VRLAQIDARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQEGTRRPPTG
Ga0247829_110449392	3300033550	Soil	VLPLAEHTDAISAREQLLAQRERELDEREDGWGGPDLHELESRLRRLETQRQAAQAGSFSGGFRRLEQEGTRHPPSQ
Ga0373959_0108690_2_367	3300034820	Rhizosphere Soil	LEERERAVEERERIPPDPDAVRLAQIDARLDELRAAEEAFLRTRRELADHSDAIAAREQLLAQRERDLDEREDGWGGPDVRELEARLRKLETQRTALGQTQGFSGGFRKLEQEGTRRPPT

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097300

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign