NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F097097

Metagenome / Metatranscriptome Family F097097

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F097097
Family Type Metagenome / Metatranscriptome
Number of Sequences 104
Average Sequence Length 108 residues
Representative Sequence MLGQKQQAEDRSNDGAANGTSLSLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAMELRSQGERAVSTVSQQVEHNPLTSLAVAFALGCVFGTLIRR
Number of Associated Samples 92
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 74.04 %
% of genes near scaffold ends (potentially truncated) 49.04 %
% of genes from short scaffolds (< 2000 bps) 89.42 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (78.846 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(42.308 % of family members)
Environment Ontology (ENVO) Unclassified
(34.615 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(45.192 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 84.40%    β-sheet: 0.00%    Coil/Unstructured: 15.60%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF06508QueC 28.85
PF00239Resolvase 5.77
PF01053Cys_Met_Meta_PP 4.81
PF03725RNase_PH_C 1.92
PF00266Aminotran_5 1.92
PF05235CHAD 1.92
PF01138RNase_PH 0.96
PF03841SelA 0.96
PF16868NMT1_3 0.96
PF028262-Hacid_dh_C 0.96
PF04055Radical_SAM 0.96
PF05443ROS_MUCR 0.96
PF12161HsdM_N 0.96
PF05957DUF883 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG0037tRNA(Ile)-lysidine synthase TilS/MesJTranslation, ribosomal structure and biogenesis [J] 28.85
COG0137Argininosuccinate synthaseAmino acid transport and metabolism [E] 28.85
COG0171NH3-dependent NAD+ synthetaseCoenzyme transport and metabolism [H] 28.85
COG0301Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)Translation, ribosomal structure and biogenesis [J] 28.85
COG0482tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domainTranslation, ribosomal structure and biogenesis [J] 28.85
COG0519GMP synthase, PP-ATPase domain/subunitNucleotide transport and metabolism [F] 28.85
COG06037-cyano-7-deazaguanine synthase (queuosine biosynthesis)Translation, ribosomal structure and biogenesis [J] 28.85
COG0780NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, C-terminal domain, T-fold superfamilyTranslation, ribosomal structure and biogenesis [J] 28.85
COG1606ATP-utilizing enzyme, PP-loop superfamilyGeneral function prediction only [R] 28.85
COG1921Seryl-tRNA(Sec) selenium transferaseTranslation, ribosomal structure and biogenesis [J] 5.77
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 5.77
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 5.77
COG0075Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucGAmino acid transport and metabolism [E] 4.81
COG01567-keto-8-aminopelargonate synthetase or related enzymeCoenzyme transport and metabolism [H] 4.81
COG0399dTDP-4-amino-4,6-dideoxygalactose transaminaseCell wall/membrane/envelope biogenesis [M] 4.81
COG0436Aspartate/methionine/tyrosine aminotransferaseAmino acid transport and metabolism [E] 4.81
COG0520Selenocysteine lyase/Cysteine desulfuraseAmino acid transport and metabolism [E] 4.81
COG0626Cystathionine beta-lyase/cystathionine gamma-synthaseAmino acid transport and metabolism [E] 4.81
COG1982Arginine/lysine/ornithine decarboxylaseAmino acid transport and metabolism [E] 4.81
COG2008Threonine aldolaseAmino acid transport and metabolism [E] 4.81
COG2873O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependentAmino acid transport and metabolism [E] 4.81
COG4100Cystathionine beta-lyase family protein involved in aluminum resistanceInorganic ion transport and metabolism [P] 4.81
COG0689Ribonuclease PHTranslation, ribosomal structure and biogenesis [J] 2.88
COG1185Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)Translation, ribosomal structure and biogenesis [J] 2.88
COG2123Exosome complex RNA-binding protein Rrp42, RNase PH superfamilyIntracellular trafficking, secretion, and vesicular transport [U] 2.88
COG3025Inorganic triphosphatase YgiF, contains CYTH and CHAD domainsInorganic ion transport and metabolism [P] 1.92
COG5607CHAD domain, binds inorganic polyphosphatesFunction unknown [S] 1.92
COG4575Membrane-anchored ribosome-binding protein ElaB, inhibits growth in stationary phase, YqjD/DUF883 familyTranslation, ribosomal structure and biogenesis [J] 0.96
COG4957Predicted transcriptional regulatorTranscription [K] 0.96

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms78.85 %
UnclassifiedrootN/A21.15 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002245|JGIcombinedJ26739_101350050All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300005332|Ga0066388_103071366Not Available853Open in IMG/M
3300005332|Ga0066388_107587573All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella stibiiresistens544Open in IMG/M
3300005610|Ga0070763_10511121All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria688Open in IMG/M
3300005764|Ga0066903_100481260All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2093Open in IMG/M
3300006755|Ga0079222_10326141All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1020Open in IMG/M
3300006871|Ga0075434_102508673All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium517Open in IMG/M
3300007255|Ga0099791_10623590Not Available528Open in IMG/M
3300007258|Ga0099793_10245248All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium864Open in IMG/M
3300007265|Ga0099794_10659389All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium556Open in IMG/M
3300007788|Ga0099795_10040005All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1663Open in IMG/M
3300007788|Ga0099795_10057682Not Available1432Open in IMG/M
3300007788|Ga0099795_10099616All Organisms → cellular organisms → Bacteria → Proteobacteria1138Open in IMG/M
3300009088|Ga0099830_11787504All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella stibiiresistens513Open in IMG/M
3300009090|Ga0099827_11380123Not Available613Open in IMG/M
3300009143|Ga0099792_10184231Not Available1176Open in IMG/M
3300009143|Ga0099792_10247214Not Available1037Open in IMG/M
3300010046|Ga0126384_11044170All Organisms → cellular organisms → Bacteria → Proteobacteria746Open in IMG/M
3300010361|Ga0126378_13161813All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella stibiiresistens524Open in IMG/M
3300010362|Ga0126377_10963437All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium918Open in IMG/M
3300010366|Ga0126379_10121598All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2373Open in IMG/M
3300010398|Ga0126383_13443038Not Available517Open in IMG/M
3300011120|Ga0150983_10964050All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella stibiiresistens521Open in IMG/M
3300011270|Ga0137391_11101455All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella stibiiresistens642Open in IMG/M
3300011271|Ga0137393_11269731Not Available624Open in IMG/M
3300012096|Ga0137389_11564638All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella stibiiresistens555Open in IMG/M
3300012189|Ga0137388_10910160All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium813Open in IMG/M
3300012202|Ga0137363_11405971Not Available588Open in IMG/M
3300012205|Ga0137362_10253228All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1522Open in IMG/M
3300012211|Ga0137377_10878628All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria828Open in IMG/M
3300012212|Ga0150985_100520658All Organisms → cellular organisms → Bacteria → Proteobacteria1061Open in IMG/M
3300012349|Ga0137387_10809123All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300012361|Ga0137360_11807080All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium517Open in IMG/M
3300012362|Ga0137361_10011640All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00886340Open in IMG/M
3300012362|Ga0137361_10954810All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria776Open in IMG/M
3300012363|Ga0137390_10393603All Organisms → cellular organisms → Bacteria → Proteobacteria1365Open in IMG/M
3300012363|Ga0137390_10821715All Organisms → cellular organisms → Bacteria → Proteobacteria887Open in IMG/M
3300012469|Ga0150984_103897241All Organisms → cellular organisms → Bacteria → Proteobacteria648Open in IMG/M
3300012582|Ga0137358_10867031Not Available594Open in IMG/M
3300012683|Ga0137398_10139807All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1563Open in IMG/M
3300012922|Ga0137394_11132672All Organisms → cellular organisms → Bacteria → Proteobacteria646Open in IMG/M
3300012923|Ga0137359_10005602All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium10362Open in IMG/M
3300012924|Ga0137413_10187781Not Available1380Open in IMG/M
3300012924|Ga0137413_11092818All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium630Open in IMG/M
3300012925|Ga0137419_10394220All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1080Open in IMG/M
3300012927|Ga0137416_10685951All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium899Open in IMG/M
3300015241|Ga0137418_10133490All Organisms → cellular organisms → Bacteria → Proteobacteria2202Open in IMG/M
3300015242|Ga0137412_10138128All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1970Open in IMG/M
3300015242|Ga0137412_10256085All Organisms → cellular organisms → Bacteria → Proteobacteria1383Open in IMG/M
3300016270|Ga0182036_10339668All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1154Open in IMG/M
3300016319|Ga0182033_11553930All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria598Open in IMG/M
3300016341|Ga0182035_11281404All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium656Open in IMG/M
3300016387|Ga0182040_10344349All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1154Open in IMG/M
3300016404|Ga0182037_10002632All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales9551Open in IMG/M
3300017959|Ga0187779_11344646Not Available507Open in IMG/M
3300017970|Ga0187783_10190451All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1508Open in IMG/M
3300020199|Ga0179592_10112363All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1251Open in IMG/M
3300020579|Ga0210407_10577693All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria877Open in IMG/M
3300020579|Ga0210407_11154478All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium585Open in IMG/M
3300020581|Ga0210399_10766542All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium790Open in IMG/M
3300021086|Ga0179596_10210609Not Available949Open in IMG/M
3300021086|Ga0179596_10338809All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria754Open in IMG/M
3300021151|Ga0179584_1029405Not Available634Open in IMG/M
3300021178|Ga0210408_10474465All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae995Open in IMG/M
3300021286|Ga0179583_1113198All Organisms → cellular organisms → Bacteria → Proteobacteria1024Open in IMG/M
3300021476|Ga0187846_10034641All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2276Open in IMG/M
3300021478|Ga0210402_10699393All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium937Open in IMG/M
3300024288|Ga0179589_10387679Not Available639Open in IMG/M
3300026356|Ga0257150_1033384All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium743Open in IMG/M
3300026374|Ga0257146_1029232Not Available895Open in IMG/M
3300026514|Ga0257168_1136796Not Available546Open in IMG/M
3300026557|Ga0179587_10557854Not Available753Open in IMG/M
3300027512|Ga0209179_1104866Not Available630Open in IMG/M
3300027655|Ga0209388_1226587Not Available513Open in IMG/M
3300028047|Ga0209526_10046746All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3045Open in IMG/M
3300028536|Ga0137415_10649250All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria867Open in IMG/M
3300030902|Ga0308202_1060560All Organisms → cellular organisms → Bacteria → Proteobacteria714Open in IMG/M
3300031091|Ga0308201_10117760All Organisms → cellular organisms → Bacteria → Proteobacteria791Open in IMG/M
3300031092|Ga0308204_10239113All Organisms → cellular organisms → Bacteria → Proteobacteria583Open in IMG/M
3300031543|Ga0318516_10116476All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1521Open in IMG/M
3300031543|Ga0318516_10456215All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium735Open in IMG/M
3300031545|Ga0318541_10505179All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria676Open in IMG/M
3300031546|Ga0318538_10016481All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae3208Open in IMG/M
3300031573|Ga0310915_10477205All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium886Open in IMG/M
3300031640|Ga0318555_10369399All Organisms → cellular organisms → Bacteria → Proteobacteria777Open in IMG/M
3300031724|Ga0318500_10270592All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria827Open in IMG/M
3300031736|Ga0318501_10288687Not Available874Open in IMG/M
3300031747|Ga0318502_10041401All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae2388Open in IMG/M
3300031768|Ga0318509_10072926All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1805Open in IMG/M
3300031798|Ga0318523_10127075All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1261Open in IMG/M
3300031805|Ga0318497_10198408All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1108Open in IMG/M
3300031819|Ga0318568_10777858All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium594Open in IMG/M
3300031833|Ga0310917_10627370All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium729Open in IMG/M
3300031890|Ga0306925_10361161All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1559Open in IMG/M
3300031893|Ga0318536_10320931All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium785Open in IMG/M
3300031910|Ga0306923_10130706All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00882856Open in IMG/M
3300031912|Ga0306921_12546822All Organisms → cellular organisms → Bacteria → Proteobacteria530Open in IMG/M
3300031942|Ga0310916_10141723Not Available1976Open in IMG/M
3300031945|Ga0310913_10109452All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1877Open in IMG/M
3300032001|Ga0306922_11457181All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria686Open in IMG/M
3300032051|Ga0318532_10185450All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium739Open in IMG/M
3300032063|Ga0318504_10288442All Organisms → cellular organisms → Bacteria → Proteobacteria776Open in IMG/M
3300032063|Ga0318504_10505143All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria579Open in IMG/M
3300033290|Ga0318519_10100478All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1556Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil42.31%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil27.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil8.65%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.88%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.88%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.88%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.92%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.96%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.96%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm0.96%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.96%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.96%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.96%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021151Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021286Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16RNAfungal (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021476Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)EnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300026356Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-AEnvironmentalOpen in IMG/M
3300026374Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-AEnvironmentalOpen in IMG/M
3300026514Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-BEnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027512Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300030902Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031091Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031092Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031768Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22EnvironmentalOpen in IMG/M
3300031798Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19EnvironmentalOpen in IMG/M
3300031805Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032051Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26EnvironmentalOpen in IMG/M
3300032063Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ26739_10135005013300002245Forest SoilMLGQKQQGEDRSNDGAANGTSLSLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTHGRVRDMAMELRSQGERAVSTVSQQVEHNPLTSLAVAFALGCVLGTLIRR*
Ga0066388_10307136623300005332Tropical Forest SoilMLGQKQQGEDRADGSAGNETALNLRYATDAIDKLRTRIDQAAQAMHDLTQVSEQWAQGTQSRVREMATELRNQGERAVNTVSEQVEHNPLTSLAVAFALGCVVGTLIRR*
Ga0066388_10758757313300005332Tropical Forest SoilVLGVYTDGDKEDKAMLGQKQQSEDRSDGGAGNGTALNFRQATDAIDKVRARIDQAAAAMRDLTQVSEHWAQGTQGRVRDMATELRNQGERAVSTVSQQVEHNPLTSLAIAFAVGCVLGTLIRR*
Ga0070763_1051112123300005610SoilMLGQKQQAEDRSNDGAANGTSLSLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAMELRSQGERAVSTVSQKVEHNPLTSLAVAFALGCVLG
Ga0066903_10048126023300005764Tropical Forest SoilVLGVYTDGDKEDKAMLGQKQQSEDRSDGGAGNGTALNFRQATDAIDKLRARIDQAAAAMRDLTQVSEHWAQGTQGRVRDMATELRNQGERAVSTVSQQVEHNPLTSLAIAFAVGCVLGTLIRR*
Ga0079222_1032614123300006755Agricultural SoilMLGQKQQSEDRSDGGTGNGTVLNLRQATDAIDKLRARIDQASAAMRDLTQVSEQWAEGAQGRVRDMAMELRNQGERAVSTVSQQVEHNPLTSLAIAFALGCVFGTLIRR*
Ga0075434_10250867313300006871Populus RhizosphereMLGQKQQSEDRADGGAGTGTALNLRQATDAIDKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAIELRNQGERAVNTVSQQVEHNPLTSL
Ga0099791_1062359023300007255Vadose Zone SoilGANGTSLSLRQATEAIDKLRSRINDVSQSMRDLTKVSEQWVEGTQGRVRDMAVQLRNQGERAVSTVSQQVEHNPLTSLAVVFALGCVVGTLIRR*
Ga0099793_1024524813300007258Vadose Zone SoilMLGQKQETENRPLDSGAQTNGGANGTSLSLRQATEAIDKLRSRINDVSQSMRDLTKVSEQWVEGTQGRVRDMAVQLRNQGERAVSTVSQQVEHNPLTS
Ga0099794_1065938913300007265Vadose Zone SoilVPDVYSVVDKEDKAMLGQKQQADDRANDGAGNGTSLGLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAMELRSQGERAVSTVSQQVEHNP
Ga0099795_1004000523300007788Vadose Zone SoilMLGQKQQGEDRSNDGAGNGTSLSLRQATDAIEKLRSRIDQASQAMHDLTQVSEQWAQGTQSRVRDLAMELRSQGERAVSTVSERVEHNPLTSLAVIFALGCVLGTLIRR*
Ga0099795_1005768223300007788Vadose Zone SoilMLGQKQETENRPLDSGAQTNGGANGTSLSLRQATEAIDKLRSRINDVSQSMRDLTKVSEQWVEGTQGRVRDMAAQLRNQGERAVSTVSQQVEHNPLTSLAVVFALGCVLGTLIRR*
Ga0099795_1009961623300007788Vadose Zone SoilMLGQKQQADDRANDGAGNGTSLGLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAMELRSQGERAVSTVSQQVEHNPLTSLAVAFALGCVFGTLIRR*
Ga0099830_1178750413300009088Vadose Zone SoilVPDVYTVVDKEDKAMLGQKQQAEDRANDSAGNGTSLSLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAIELRSQGERAVSTVSQQVEHNPLTSLAVAFALGCVLGTLIRR*
Ga0099827_1138012313300009090Vadose Zone SoilMLGQKQETENRSLDSGAQTNGGANGTSLSLRQATEAIDKLRSRINDVSQSMRDLTKVSEQWVEGTQGRVRDMAVQLRNQGERAVSTVSQQVEHNPLTSLAVVFALGCVLGTLIRR*
Ga0099792_1018423123300009143Vadose Zone SoilMLGQKQQGEDRSNDGAGNGTSLSLRQATDAIEKLRSRIDQASQAMHDLTQVSEQWAQGTQNRVRDLAMELRSQGERAVSTVSERVEHNPLT
Ga0099792_1024721423300009143Vadose Zone SoilMLGQKQETENRSLDSGAQTNGGANGTSLSLRQATEAIDKLRSRINDVSQSMRDLTKVSEQWVEGTQGRVRDMAVQLRNQGERAVSTVSQQVEHNPLTSLAVVFALGCVVGTLIRR*
Ga0126384_1104417023300010046Tropical Forest SoilLGQKQQSEDRLDGGAGNGTALNLRQATDAIDKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAVELRHQGERAVSTVSQQVEHNPLTSLAIAFALGCVFGTLIRR*
Ga0126378_1316181313300010361Tropical Forest SoilAMLGQKQQSEDRVDGGAGNGTALNLRQATDAIDKLRSRIDQASQAMHDLTQVSEQWAQGTQGRVRDMAIELRNQGERAVNTVSQQVEHNPLTSLAIAFALGCVFGTLIRR*
Ga0126377_1096343713300010362Tropical Forest SoilHEGKAMLGQKQQSEDRVDGGAGNGTALNLRQATDAIDKLRSRIDQASQAMHDLTQVSEQWAQGTQGRVRDMAIELRNQGERAVNTVSQQVEHNPLTSLAIAFALGCVFGTLIRR*
Ga0126379_1012159813300010366Tropical Forest SoilVLGVYTDGDKEDKAMLGQKQQSEDRSDGGAGNGTALNFRQATDAIDKLRARIDQAAAAMRDLTQVSEHWAQGTQGRVRDMATELRNQGERAVNTVSQQVEHNP
Ga0126383_1344303813300010398Tropical Forest SoilVLGVYTVGDKEGKAMLGQKQQGEERADGATGNETALNLRYATDAIDKLRTRIDQAAQAMRDLTQVSEQWAQGTQGRVREMAIELRNQGERAVNTVSEQVEHNPLTSLAVAFALGCVVGTLIRR*
Ga0150983_1096405013300011120Forest SoilGGQAMLGQKQQAEDRSNDGAANGTSLSLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAMELRSQGERAVSTVSQQVEHNPLTSLAVAFALGCVFGTLIRR*
Ga0137391_1110145513300011270Vadose Zone SoilVPDVYTVVDKEDKAMLGQKQQAEDRANDSAGNGTSLSLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAIELRSQGERAVSTVSQQVEHNPLTSLAVAFALGCVVGTLIRR*
Ga0137393_1126973113300011271Vadose Zone SoilMLGQKQETENRSLDSGAQTNGGANGTSLSLRQATEAIDKLRSRINDVSQSMRDLTKVSEQWVEGTQGRVRDMAVQLRNQGERAVS
Ga0137389_1156463813300012096Vadose Zone SoilVPDVYTVVDKEDKAMLGQKQQAEDRANDSAGNGTSLSLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAMELRSQGERAVSTVSQQVEHNPLTSLAVAFALGCVVGTLIRR*
Ga0137388_1091016023300012189Vadose Zone SoilVPDVYTVVDKEDKAMLGQKQQAEDRANDSAGNGTSLSLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAIELRSQGERAVSTVSQQVEHNPLTSLAVAFA
Ga0137363_1140597123300012202Vadose Zone SoilRSLDSGAQTNGGANGTSLSLRQATEAIDKLRSRINDVSQSMRDLTKVSEQWVEGTQGRVRDMAVQLRNQGERAVSTVSQQVEHNPLTSLAVVFALGCVLGTLIRR*
Ga0137362_1025322813300012205Vadose Zone SoilVPDVYSVVDKEDKAMLGQKQQADDRANDGAGNGTSLGLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAMELRSQGERAVSTVSQQVEHNPLTSLAVAFALGCVFGTLIRR*
Ga0137377_1087862823300012211Vadose Zone SoilMLGQKQQADDRANDAGNGTSLGLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAMELRSQGERAVSTVSQQVEHNPLTSLAVAFALGCVFGTLIRR*
Ga0150985_10052065823300012212Avena Fatua RhizosphereMLGQKQQSEDRSDGGAGNGTVLNLRQATDAIDKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAIELRNQGERAVNTVSQQVEHNPLTSLAVAFALGCVFGTLIRR*
Ga0137387_1080912323300012349Vadose Zone SoilVPDVYSVVDKEDKAMLGQKQQADDRANDAGNGTSLGLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAMELRSQGERAVSTVSQQVEHNPLTSLAVAFAVGCVFGTLIRR*
Ga0137360_1180708013300012361Vadose Zone SoilMWGQKQEGGDGRVRSNGGEGNAISLGLPQATEAIEKLRSRIDQASQAMRDLTQVTEQWAQGTQGRVRDMAKELRTQGERAVGSVSRQVEHNPLTSLAIAFAVGCV
Ga0137361_1001164083300012362Vadose Zone SoilMLGQKQQADDRANDGAGNGTSLGLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAMELRSQGERAVSTVSQQVEHNPLTSLAV
Ga0137361_1095481023300012362Vadose Zone SoilVPDVYTVVDKEDKAMLGQKQQAEDRANDGAGNGTSLGLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAMELRSQGERAVSTVSQQVEHNPLTSLAVAFALGCVFGTLIRR*
Ga0137390_1039360313300012363Vadose Zone SoilTVVDKEDKAMLGQKQQAEDRANDSAGNGTSLSLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAIELRSQGERAVSTVSQQVEHNPLTSLAVAFALGCVVGTLIRR*
Ga0137390_1082171523300012363Vadose Zone SoilMLGQKQETENRSLDSGAQTNGGANGTSLSLRQATEAIDKLRLRINDVSQSMRDLTKVSEQWVEGTQGRVRDMAVQLRNQGERAVSTVSQQVEHNPLTSLAVVFALGCVLGTLIRR*
Ga0150984_10389724113300012469Avena Fatua RhizosphereDKAMLGQKQQSEDRSDGGAGNGTVLNLRQATDAIDKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAIELRNQGERAVNTVSQQVEHNPLTSLAVAFALGCVFGTLIRR*
Ga0137358_1086703113300012582Vadose Zone SoilRESGECRFIAHLSGEEDKAMLGQKQETENRSLDSGAQTNGGANGTSLSLRQATEAIDKLRSRINDVSQSMRDLTKVSEQWVEGTQGRVRDMAVQLRNQGERAVSTVSQQVEHNPLTSLAVVFALGCVVGTLIRR*
Ga0137398_1013980713300012683Vadose Zone SoilMLGQKQQADDRANDGAGNGTSLGLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAIELRSQGERAVSTVSQQVEHNPLTSLAVAFAVGCVFGTLIRRGEAALRREGRPHAVLLMPAA*
Ga0137394_1113267213300012922Vadose Zone SoilMLGQKQQADDRASDGAGNGTSLGLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAMELRNQGERAVSTVSQQVEHNPLTSLAVAFALGCVVGTLIRR*
Ga0137359_1000560253300012923Vadose Zone SoilVPDVYTVVDKEDKAMLGQKQQAEDRANDGAGNGTSLGLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAMELRSQGERAVSTVSQQVEHNPLTSLAVAFAVGCVFGTLIRR*
Ga0137413_1018778123300012924Vadose Zone SoilMLGQKQQGEDRSNDGAGNGTSLSLRQATDAIEKLRSRIDQASQAMHDLTQVSEQWAQGTQGRVRDMAMELRSQGERAVSTVSERVEHNPLTSLAVVFALGCVLGTL
Ga0137413_1109281813300012924Vadose Zone SoilMLGQKQQADDRANGGAGNGTSLGLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAMELRSQGERAVSTVSQQVEHNPLTSL
Ga0137419_1039422013300012925Vadose Zone SoilMLGQKQQADDRANDGAGNGTSLGLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAMELRNQGERAVSTVSQQVEHNPLTSLAVAFAVGCV
Ga0137416_1068595123300012927Vadose Zone SoilVPDVYSVVDKEDKAMLGQKQQADDRANDGAGNGTSLGLRQATDAIEKLRSRIDQASQAMRDLTQASEQWAQGTQGRVRDMAMELRNQGERAVSTVSQQVEHNPLTSLAVAFALG
Ga0137418_1013349023300015241Vadose Zone SoilVPDVYSVVDKEDKAMLGQKQQADDRANDGAGNGTSLGLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAMELRNQGERAVSTVSQQVEHNPLTSLAVAFALGCVFGTLIRR*
Ga0137412_1013812823300015242Vadose Zone SoilVPDVYSVVDKEDKAMLGQKQQADDRANGGAGNGTSLGLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAMELRSQGERAVSTVSQQVEHNPLTSLAVAFALGCVFGTLIRR*
Ga0137412_1025608523300015242Vadose Zone SoilMLGQKQETENRSLDSGAQTNGGANGTSLSLRQATEAIDKLRSRINDVSQSMRDLTKVSEQWVEGTQGRVRDMAMELRSQGERAVSTVSQQVEHNPLTSLAVVFALGCVVGTLIRR*
Ga0182036_1033966823300016270SoilGQKQQGEDRSDGGAGNGTALNLRQATDAIDKLRARIDQASQAMRDLSQVSEQWAQGTQGRVRDMAAELRNQGERAVSTVSQQVEHNPLTSLAVAFALGCVFGTLIRR
Ga0182033_1155393023300016319SoilVLGVYSGFDEEEDQAMLGQKQQGEDRSDGGAGNGTALNLRQATDAIDKLRARIDQASQAMRDLSQVSEQWAQGTQGRVRDMAAELRNQGERAVSTVSQQVEHSPLTS
Ga0182035_1128140413300016341SoilMLGQKQQSEDRSDGGTGNGTVLNLRQATDAIDKLRARIDQASAAMRDLTQVSEQWAEGAQRRVRDMAMELRNQGERAVRTVSQQVEHNPL
Ga0182040_1034434913300016387SoilNGTALNLRQATDAIDKLRARIDQASQAMRDLSQVSEQWAQGTQGRVRDMAAELRNQGERAVSTVSQQVEHNPLTSLAVAFALGCVFGTLIRR
Ga0182037_1000263223300016404SoilVLGVYTDGDKEDKAMLGQKQQSEDRSDGGAGNGTALNFRQATDAIDKLRARIDQAAAAMRDLTQVSEHWAQGTQGRVRDMATELRNQGERAVSTVSQQVEHNPLTSLAIAFAVGCVLGTLSRR
Ga0187779_1134464623300017959Tropical PeatlandMWGQKQEGGDQSQDNGAPSERSDGGEGNGSSPGLHQATEAIDRLRSRIDEASQAMRDLTHLSERWVHGTQHRVRDMAKDLRDQGGRAVGSVARQVEHNPL
Ga0187783_1019045123300017970Tropical PeatlandMWGQKQEGGDGVAGSTSSNGNEANATPLGLRQASDAIDRLRARIDQASQAMRDLTEVTEQWAEGTQDRVRGMAKELRNQGERTVETVSRQVEHNPMTSLAVAFAIGFLCAGLIRR
Ga0179592_1011236333300020199Vadose Zone SoilMLGQKQETENRSLDSGAQTNGGANGTSLSLRQATEAIDKLRSRINDVSQSMRDLTKVSEQWVEGTQGRVRDMAVQLRN
Ga0210407_1057769313300020579SoilMLGQKQQAEDRSNDGAANGTSLSLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAMELRSQGERAVSTVSQQVEHNPLTSLAVAFALGCVFGTLIRR
Ga0210407_1115447813300020579SoilMLGQKQQGEDRANDGAGNGASLTLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAVELRSQGERAVSTVAQQVEHNPLTSLAVAFALGCVLGTLIRR
Ga0210399_1076654223300020581SoilMLGQKQQGEDRSNDGAGNGTSLSLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAMELRSQGERAVSTVSQQVEHNPL
Ga0179596_1021060913300021086Vadose Zone SoilMLGQKQETENRSLDSGAQTNGGANGTSLSLRQATEAIDKLRSRINDVSQSMRDLTKVSEQWVEGTQGRVRDMAVQLRNQGERAVSTVSQQVEHNPLTSLAVVFALGCVLGTLIRR
Ga0179596_1033880923300021086Vadose Zone SoilMLGQKQQAEDRANDSAGNGTSLSLRQATDAIEKLRSRIDQASQAMHDLTQVSEQWAQGTQSRVRDLAMELRSQGERAVSTVSERVEHNPLTSLAVVFALGCV
Ga0179584_102940523300021151Vadose Zone SoilMLGQKQETENRSLDSGAQTNGGANGTSLSLRQATEAIDKLRSRINDVSQSMRDLTKVSEQWVEGTQGRVRDMAVQLRNQGERAVSTVSQQVEHNPLTSLAVVFALGCVVGTLIRR
Ga0210408_1047446523300021178SoilMLGQKQQGEDRSNDGATNGTSLSLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAMELRSQGERAVSSVSQQVEHNPLTSLAVAFALGCVVGTLIRR
Ga0179583_111319823300021286Vadose Zone SoilMLGQKQQADDRANDGAGNGTSLGLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAMELRSQGERAVSTVSQQVEHNPLTSLAVAFALGCVFGTLIRR
Ga0187846_1003464123300021476BiofilmMWGQKQEGGDSVEGSGQSEGSQGNGTSAGLRQAGEAIDRLRSRIDQASQAMRDLTQVTEQWAEGTQHRVRGMAKDLRGQGERAVETVSRQVEHNPLTSLAVAFAVGFLCAALIRR
Ga0210402_1069939313300021478SoilMLGQKQQGEDRSNDGAANGTSLSLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAMELRSQGERAVSTVAQQVEHNPLTSLAVAFALGCVLGTLIRR
Ga0179589_1038767913300024288Vadose Zone SoilMLGQKQETENRSLDSGAQTNGGANGTSLSLRQATEAIDKLRSRINDVSQSMRDLTKVSEQWVEGTQGRVRDMAVQLRNQGERAVSTISQQVEHNPLTSLAVVFALGCVVGTLIRR
Ga0257150_103338423300026356SoilMLGQKQQGEDRSNDGAGNGTSLSLRQATDAIEKLRSRIDQASQAMHDLTQVSEQWAQGTQGRVRDMAMELRSQGERAVSTVSQRVEHNPLTSLAVVFALGCVLGTLIRR
Ga0257146_102923213300026374SoilMLGQKQETENRSLDSGAQTNGGANGTSLSLRQATEAIDKLRSRINDVSQSMRDLTKVSEQWVEGTQGRVRDMAVQLRSQGERAVSTVSQQVEHNPLTSLAVVFALGCVLGTLIRR
Ga0257168_113679633300026514SoilMLGQKQETENRSLDSGAQTNGGANGTSLSLRQATEAIDKLRSRINDVSQSMRDLTKVSEQWVEGTQGRVRDMAVQLRNQGERAVSTVS
Ga0179587_1055785413300026557Vadose Zone SoilMLGQKQQGEDRSNDGAGNGTSLSLRQATDAIEKLRSRIDQASQAMHDLTQVSEQWAQGTQSRVRDLAMELRSQGERAVSTVSERVEHNPLTSLAVVFALGCV
Ga0209179_110486613300027512Vadose Zone SoilMLGQKQETENRPLDSGAQTNGGANGTSLSLRQATEAIDKLRSRINDVSQSMRDLTKVSEQWVEGTQGRVRDMAAQLRNQGERAVSTVSQQVEHNPLTSLAVVFALGCVLGTLIRR
Ga0209388_122658713300027655Vadose Zone SoilGGANGTSLSLRQATEAIDKLRSRINDVSQSMRDLTKVSEQWVEGTQGRVRDMAVQLRNQGERAVSTVSQQVEHNPLTSLAVVFALGCVVGTLIRR
Ga0209526_1004674623300028047Forest SoilMLGQKQQGEDRSNDGAANGTSLSLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTHGRVRDMAMELRSQGERAVSTVSQQVEHNPLTSLAVAFALGCVLGTLIRR
Ga0137415_1064925013300028536Vadose Zone SoilMLGQKQQADDRANDGAGNGTSLGLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAMELRNQGERAVSTVSQQVEHNPLTSLAVAFALGCVFGTLIRR
Ga0308202_106056013300030902SoilGQAMLGQKQQGEDRSNDGATNGTSLSLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAMELRSQGERAVSTVSQQVEHNPLTSLAVAFALGCVVGTLIRR
Ga0308201_1011776013300031091SoilLSLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAMELRSQGERAVSTVSQQVEHNPLTSLAVAFALGCVVGTLIRR
Ga0308204_1023911323300031092SoilTSLSLRQATDAIEKLRSRIDQASQAMRDLTQVSEQWAQGTQGRVRDMAMELRSQGERAVSTVSQQVEHNPLTSLAVAFALGCVVGTLIRR
Ga0318516_1011647623300031543SoilVLGVYTDGDKEDKAMLGQKQQSEDRSDGGAGNGTALNFRQATDAIDKLRARIDQAAAAMRDLTQVSEHWAQGTQGRVRDMATELRNQGERAVSTVSQQVEHNPLTSLAIAFAVGCVLGTLIRR
Ga0318516_1045621513300031543SoilMLGQKQQSEDRSDGGTGNGTVLNLRQATDAIDKLRARIDQASAAMRDLTQVSEQWAEGAQRRVRDMAMELRNQGERAVRTVSQQVEHNPLTS
Ga0318541_1050517923300031545SoilVLGVYSGFDEEEDQAMLGQKQQGEDRSDGGAGNGTALNLRQATDAIDKLRARIDQASQAMRDLSQVSEQWAQGTQGRVRDMAAELRNQGERAVSTVSQQVEHNPLTSLAVAFALGCVFGTLIRR
Ga0318538_1001648113300031546SoilMLGQKQQSEDRSDGGAGNGTALNFRQATDAIDKLRARIDQAAAAMRDLTQVSEHWAQGTQGRVRDMATELRNQGERAVSTVSQQVEHNPLTSLAIAFAVGCVLGTLIRR
Ga0310915_1047720523300031573SoilMLGQKQQSEDRSDGGTGNGTVLNLRQATDAIDKLRARIDQASAAMRDLTQVSEQWAEGAQGRVRDMAMELRNQGERAVRTVSQQVEHNPLTSLAIAFALGCVFGTLIRR
Ga0318555_1036939923300031640SoilVLAVYTDGDKEDKAMLGQKQQSEDRSDGGAGNGTALNFRQATDAIDKLRARIDQAAAAMRDLTQVSEHWAQGTQGRVRDMATELRNQGERAVSTVSQQVEHNPLTSLAIAFAVGCVLGTLIRR
Ga0318500_1027059213300031724SoilVLGVYTDGDKEDKAMLGQKQQSEDRSDGGAGNGTALNFRQATDAIDKLRARIDQAAAAMRDLTQVSEHWAQGTQGRVRDMATELRNQGERAVSTVSQQVEHNPLTS
Ga0318501_1028868723300031736SoilDGGAGNGTALNLRQATDAIDKLRARIDQASQAMRDWSQVSEQWAQGTQGRVRDMAAELRNQGERAVSTVSQQVEHSPLTSLAVAFALGCVFGTLIRR
Ga0318502_1004140113300031747SoilGVYTDGDKEDKAMLGQKQQSEDRSDGGAGNGTALNFRQATDAIDKLRARIDQAAAAMRDLTQVSEHWAQGTQGRVRDMATELRNQGERAVSTVSQQVEHNPLTSLAIAFAVGCVLGTLIR
Ga0318509_1007292623300031768SoilMLGQKQQGEDRSDGGAGNGTALNLRQATDAIDKLRARIDQASQAMRDLSQVSEQWAQGTQGRVRDMAAELRNQGERAVSTVSQQVEHNPLTSLAVAFALGCVFGTLIRR
Ga0318523_1012707523300031798SoilMLGQKQQSEDRSDGGTGNGTVLNLRQATDAIDKLRARIDQASAAMRDLTQVSEQWAEGAQGRVRDMAMELRNQGERAVRTVSQQVEHNPLTSLA
Ga0318497_1019840813300031805SoilGNGTALNFRQATDAIDKLRARIDQAAAAMRDLTQVSEHWAQGTQGRVRDMATELRNQGERAVSTVSQQVEHNPLTSLAIAFAVGCVLGTLIRR
Ga0318568_1077785823300031819SoilFDEEEDQAMLGQKQQGEDRSDGGAGNGTALNLRQATDAIDKLRARIDQASQAMRDLSQVSEQWAQGTQGRVRDMAAELRNQGERAVSTVSQQVEHNPLTSLAVAFALGCVFGTLIRR
Ga0310917_1062737013300031833SoilLGQKQQSEDRSDGGTGNGTVLNLRQATDAIDKLRARIDQASAAMRDLTQVSEQWAEGAQRRVRDMAMELRNQGERAVRTVSQQVEHNPLTSLAIAFALGCVFGTLIRR
Ga0306925_1036116123300031890SoilMLGQKQQSEDRSDGGTGNGTVLNLRQATDAIDKLRARIDQASAAMRDLTQVSEQWAEGAQRRVRDMAMELRNQGERAVRTVSQQVEHNPLTSLAIAFALGCVFGTLIRR
Ga0318536_1032093113300031893SoilQQSEDRSDGGTGNGTVLNLRQATDAIDKLRARIDQASAAMRDLTQVSEQWAEGAQRRVRDMAMELRNQGERAVRTVSQQVEHNPLTSLAIAFALGCVFGTLIRR
Ga0306923_1013070613300031910SoilGTALNLRQATDAIDKLRARIDQASQAMRDLSQVSEQWAQGTQGRVRDMAAELRNQGERAVSTVSQQVEHNPLTSLAVAFALGCVFGTLIRR
Ga0306921_1254682223300031912SoilALNLRLATDAIDKLRTRIDQAAQAMRDLTQVREQWAQGAQGRVREMAGELRSQGERAVNTVSEQVEHNPLTSLAVAFALGCVVGTLIRR
Ga0310916_1014172313300031942SoilGTVLNLRQATDAIDKLRARIDQASAAMRDLTQVSEQWAEGAQGRVRDMAMELRNQGERAVRTVSQQVEHNPLTSLAIAFALGCVFGTLIRR
Ga0310913_1010945213300031945SoilVLGVYTDGDKEDKAMLGQKQQSEDRSDGGAGNGTALNFRQATDAIDKLRARIDQAAAAMRDLTQVSEHWAQGTQGRVRDMATELRNQGERAVSTVSQQVEHNPLTSLAIAFAVGCV
Ga0306922_1145718113300032001SoilVLGVYSGFDEEEDQAMLGQKQQGEDRSDGGAGNGTALNLRQATDAIDKLRARIDQASQAMRDWSQVSEQWAQGTQGRVRDMAAELRNQGERAVSTVSQQVEHNPLTSLAVAFALGCVFGTLIRR
Ga0318532_1018545013300032051SoilMLGQKQQGEDRSDGGAGNGTALNLRQATDAIDKLRARIDQASQAMRDLSQVSEQWAQGTQGRVRDMAAELRNQGERAVSTVSQQVEHSPLTSLAVAFALGCVFGTLIRR
Ga0318504_1028844223300032063SoilMLGQKQQSEDRSDGGTGNGTVLNLRQATDAIDKLRARIDQASAAMRDLTQVSEQWAEGAQGRVRDMAMELRNQGERAVSTVSQQVEHNPLTSLAIAFALGCVFGTLIRR
Ga0318504_1050514323300032063SoilVLGVYSGFDEEEDQAMLGQKQQGEDRSDGGAGNGTALNLRQATDAIDKLRARIDQASQAMRDLSQVSEQWAQGTQGRVRDMAAELRNQGERAVSTVSQQVEHNPLTSLAVAFALGCVFGT
Ga0318519_1010047833300033290SoilMLGQKQQSEDRSDGGAGNGTALNFRQATDAIDKLRARIDQAAAAMRDLTQVSEHWALGTQGRVRDMATELRNQGERAVSTVSQQVEHNPLTSLAIAFAVGCVLGTLIRR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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