NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F097093

Metagenome / Metatranscriptome Family F097093

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F097093
Family Type Metagenome / Metatranscriptome
Number of Sequences 104
Average Sequence Length 72 residues
Representative Sequence MSQSHNPPIDPDTVAEIAPGEGPEPGSVEYGGSEIHREGAGSGARAPAGGEAVTTEAGTFQDLPVGEDDQGE
Number of Associated Samples 86
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 85.44 %
% of genes near scaffold ends (potentially truncated) 21.15 %
% of genes from short scaffolds (< 2000 bps) 89.42 %
Associated GOLD sequencing projects 79
AlphaFold2 3D model prediction Yes
3D model pTM-score0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (52.885 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(18.269 % of family members)
Environment Ontology (ENVO) Unclassified
(37.500 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(62.500 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 3.00%    β-sheet: 6.00%    Coil/Unstructured: 91.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.23
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF01336tRNA_anti-codon 8.65
PF00196GerE 3.85
PF07690MFS_1 2.88
PF00300His_Phos_1 1.92
PF09924LPG_synthase_C 1.92
PF00005ABC_tran 1.92
PF07944Glyco_hydro_127 0.96
PF00756Esterase 0.96
PF14310Fn3-like 0.96
PF08281Sigma70_r4_2 0.96
PF02133Transp_cyt_pur 0.96
PF03446NAD_binding_2 0.96
PF04679DNA_ligase_A_C 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG1793ATP-dependent DNA ligaseReplication, recombination and repair [L] 0.96
COG3533Beta-L-arabinofuranosidase, GH127 familyCarbohydrate transport and metabolism [G] 0.96

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A52.88 %
All OrganismsrootAll Organisms47.12 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002568|C688J35102_120395784All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1037Open in IMG/M
3300004016|Ga0058689_10155722Not Available530Open in IMG/M
3300004463|Ga0063356_101575753All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia976Open in IMG/M
3300005329|Ga0070683_101934903Not Available567Open in IMG/M
3300005338|Ga0068868_101576096All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia616Open in IMG/M
3300005339|Ga0070660_100823246All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → Modestobacter versicolor781Open in IMG/M
3300005343|Ga0070687_101106540Not Available580Open in IMG/M
3300005353|Ga0070669_100868799All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. MH-G8769Open in IMG/M
3300005365|Ga0070688_101187733All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → Modestobacter versicolor613Open in IMG/M
3300005438|Ga0070701_10154320All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1325Open in IMG/M
3300005441|Ga0070700_101224029Not Available628Open in IMG/M
3300005456|Ga0070678_101354877Not Available663Open in IMG/M
3300005456|Ga0070678_101473303Not Available637Open in IMG/M
3300005548|Ga0070665_101080570Not Available814Open in IMG/M
3300005548|Ga0070665_102278034Not Available545Open in IMG/M
3300005577|Ga0068857_101550548Not Available646Open in IMG/M
3300005615|Ga0070702_100221142All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1266Open in IMG/M
3300005617|Ga0068859_102504118Not Available568Open in IMG/M
3300005618|Ga0068864_102463683Not Available526Open in IMG/M
3300006755|Ga0079222_10483153All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia900Open in IMG/M
3300006844|Ga0075428_100569967All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1210Open in IMG/M
3300006845|Ga0075421_100711698All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1166Open in IMG/M
3300006931|Ga0097620_102505018Not Available568Open in IMG/M
3300007790|Ga0105679_10297969All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia thermophila1293Open in IMG/M
3300009098|Ga0105245_10115714All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus2499Open in IMG/M
3300009098|Ga0105245_10177812Not Available2031Open in IMG/M
3300009098|Ga0105245_10246114All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus1735Open in IMG/M
3300009098|Ga0105245_12444427Not Available576Open in IMG/M
3300009101|Ga0105247_10865377All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia695Open in IMG/M
3300009156|Ga0111538_12717330Not Available620Open in IMG/M
3300009176|Ga0105242_11995956Not Available622Open in IMG/M
3300009177|Ga0105248_13102432Not Available529Open in IMG/M
3300009553|Ga0105249_12739475Not Available565Open in IMG/M
3300009789|Ga0126307_10518912All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium962Open in IMG/M
3300010036|Ga0126305_10953957Not Available587Open in IMG/M
3300010039|Ga0126309_10588225Not Available698Open in IMG/M
3300010145|Ga0126321_1375932All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1051Open in IMG/M
3300010396|Ga0134126_11624578Not Available711Open in IMG/M
3300012957|Ga0164303_10781211Not Available654Open in IMG/M
3300012986|Ga0164304_11255504Not Available601Open in IMG/M
3300012989|Ga0164305_11910342Not Available539Open in IMG/M
3300013102|Ga0157371_10731367All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia742Open in IMG/M
3300013105|Ga0157369_10273259All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus1761Open in IMG/M
3300014326|Ga0157380_10787274Not Available966Open in IMG/M
3300014487|Ga0182000_10201380All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia763Open in IMG/M
3300014968|Ga0157379_11111909Not Available757Open in IMG/M
3300015371|Ga0132258_10587309All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus2795Open in IMG/M
3300015374|Ga0132255_100211758All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2747Open in IMG/M
3300018432|Ga0190275_10002330All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria13717Open in IMG/M
3300018465|Ga0190269_12032583Not Available502Open in IMG/M
3300018466|Ga0190268_10006147All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia2995Open in IMG/M
3300018466|Ga0190268_10383664Not Available894Open in IMG/M
3300018466|Ga0190268_11785513Not Available553Open in IMG/M
3300018481|Ga0190271_10971483Not Available974Open in IMG/M
3300018920|Ga0190273_10241951All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1164Open in IMG/M
3300018920|Ga0190273_10519608Not Available876Open in IMG/M
3300018920|Ga0190273_10745748Not Available767Open in IMG/M
3300018920|Ga0190273_10759683Not Available762Open in IMG/M
3300018920|Ga0190273_11047375Not Available678Open in IMG/M
3300018920|Ga0190273_12270843Not Available512Open in IMG/M
3300019767|Ga0190267_10105276All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1132Open in IMG/M
3300019767|Ga0190267_11531755Not Available516Open in IMG/M
3300020075|Ga0206349_1713043Not Available529Open in IMG/M
3300020080|Ga0206350_11579228Not Available517Open in IMG/M
3300020082|Ga0206353_11385586All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1487Open in IMG/M
3300024426|Ga0196960_10092737All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → Modestobacter versicolor894Open in IMG/M
3300024430|Ga0196962_10051504All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales1246Open in IMG/M
3300025900|Ga0207710_10305198Not Available805Open in IMG/M
3300025901|Ga0207688_10012186All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4677Open in IMG/M
3300025908|Ga0207643_10063446Not Available2112Open in IMG/M
3300025927|Ga0207687_10168283All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1688Open in IMG/M
3300025927|Ga0207687_10909279Not Available753Open in IMG/M
3300025940|Ga0207691_10581848All Organisms → cellular organisms → Bacteria948Open in IMG/M
3300025981|Ga0207640_10146849All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus1727Open in IMG/M
3300026041|Ga0207639_11716826Not Available588Open in IMG/M
3300026075|Ga0207708_11542914Not Available584Open in IMG/M
3300026078|Ga0207702_11976875Not Available574Open in IMG/M
3300026121|Ga0207683_11396321Not Available647Open in IMG/M
3300027750|Ga0209461_10030938All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1019Open in IMG/M
3300027775|Ga0209177_10438273All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria532Open in IMG/M
3300027880|Ga0209481_10367470All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria735Open in IMG/M
3300027907|Ga0207428_10872738Not Available636Open in IMG/M
3300028587|Ga0247828_10542740Not Available699Open in IMG/M
3300028592|Ga0247822_10650978All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia848Open in IMG/M
3300028592|Ga0247822_11696594All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria537Open in IMG/M
3300028596|Ga0247821_10232858Not Available1100Open in IMG/M
3300028705|Ga0307276_10040448All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1003Open in IMG/M
3300030336|Ga0247826_10856030Not Available715Open in IMG/M
3300031847|Ga0310907_10244768All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia879Open in IMG/M
3300031854|Ga0310904_10066575All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1864Open in IMG/M
3300031903|Ga0307407_11503330Not Available533Open in IMG/M
3300031908|Ga0310900_10128717All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1678Open in IMG/M
3300031938|Ga0308175_100012326All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria6494Open in IMG/M
3300031938|Ga0308175_101835724All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae679Open in IMG/M
3300032012|Ga0310902_10088949All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus1623Open in IMG/M
3300032074|Ga0308173_10795778All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → Modestobacter versicolor870Open in IMG/M
3300032074|Ga0308173_11431328All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia649Open in IMG/M
3300032080|Ga0326721_11097994Not Available512Open in IMG/M
3300033550|Ga0247829_10517293Not Available989Open in IMG/M
3300033551|Ga0247830_10100880All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae2029Open in IMG/M
3300034000|Ga0334918_027041All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia800Open in IMG/M
3300034173|Ga0334925_034088Not Available1120Open in IMG/M
3300034669|Ga0314794_171944Not Available514Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil18.27%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil15.38%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere6.73%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.81%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.85%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere3.85%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.88%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere2.88%
Hypolithic BiocrustEnvironmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust2.88%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil2.88%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.88%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere2.88%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.88%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.92%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.92%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.92%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.92%
AgaveHost-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave1.92%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.96%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.96%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.96%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.96%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.96%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.96%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.96%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.96%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004016Agave microbial communities from Guanajuato, Mexico - As.Ma.rzHost-AssociatedOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2)Host-AssociatedOpen in IMG/M
3300007790Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projectsEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010145Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014487Bulk soil microbial communities from Mexico - Magueyal (Ma) metaGEnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300019767Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 TEnvironmentalOpen in IMG/M
3300020075Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020080Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020082Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024426Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5EnvironmentalOpen in IMG/M
3300024430Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20EnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027750Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)Host-AssociatedOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028596Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14EnvironmentalOpen in IMG/M
3300028705Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032080Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034000Biocrust microbial communities from Mojave Desert, California, United States - 14HMCEnvironmentalOpen in IMG/M
3300034173Biocrust microbial communities from Mojave Desert, California, United States - 21HNCEnvironmentalOpen in IMG/M
3300034669Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J35102_12039578423300002568SoilMTQSQHPPIDPDTVAEIAPGEGPEPGSTYYGGSEIHDDHVGEGAEAAGDPAAGGPAAGESVTTEAGTFEDLPVSADEQIE*
Ga0058689_1015572213300004016AgaveMTQSQNPPTDPDTVAEIAPGQGPEPGSVEYGGSEIHTDAVDADAGGSSDAGGQAVTTEAGTFEDLPVTAEEQGD*
Ga0063356_10157575323300004463Arabidopsis Thaliana RhizosphereMTSSQHPIDPSTVAEIAPGEGPEPGSVEYGGSEIHSDDVGAAAGGGGVTTEAGTFDELPVDEDDQGE*
Ga0070683_10193490323300005329Corn RhizosphereMSQSHNSPLDPDTVAEVAPGEGPEPGSVEYGGSEIHKEGAGSGAPASQSGEAVTTEAGTFQDLPPGEADQGE*
Ga0068868_10157609613300005338Miscanthus RhizosphereMSQSHNSPLDPDTVAEVAPGEGPEPGSVEYGGSEIHKEGAGSGARASQSGEAVTTEAGTFQDLPPGEADQGE*
Ga0070660_10082324623300005339Corn RhizosphereMSQSHNSPLDPDTVAEVAPGEGPEPGSVEYGGSEIHGEDVGAGAPAGAGGAVTTEAGTFEDLPVTPDEQGD*
Ga0070687_10110654023300005343Switchgrass RhizosphereMTQSQHPVDPTTVAEIAPGQGPEPGSVEYGGSEIALEGAGEGTAPDDAGAPVVSEAGIFEALPVTPDEQVE*
Ga0070669_10086879923300005353Switchgrass RhizosphereMSQSHKPPIDPDTVAEIAPGEGPEPGSVEYGGSEIHREGAGSGASAPAGGEAVTTEAGTFQDLPPGEADQGE*
Ga0070688_10118773313300005365Switchgrass RhizosphereMSQSHNSPLDPDTVAEVAPGEGPEPGSVEYGGSEIHKEGAGSGAPASQSGEAVTTEAG
Ga0070701_1015432023300005438Corn, Switchgrass And Miscanthus RhizosphereMSQSHNSPLDPDTVAEVAPGEGPEPGSVEYGGSEIHQEGAGSGAPASQSGEAVTTEAGTFQDLPPGEADQGE*
Ga0070700_10122402913300005441Corn, Switchgrass And Miscanthus RhizosphereMSQSHNSPLDPDTVAEVAPGEGPEPGSVEYGGSEIHQEGAGSGAPASQGGEAVTTEAGTFQDLPVGEDDQGE*
Ga0070678_10135487723300005456Miscanthus RhizosphereMTQSQHPVDPTTVAEIAPGEGPEPGSVEYGGSEIHGDEVGADAPAGSGGAVTTEAGTFEDLPVTPDEQGD*
Ga0070678_10147330323300005456Miscanthus RhizosphereMSQSHNSPLDPDTVAEVAPGEGPEPGSVEYGGSEIHQEGAGSGAPASQGGEAVTTEAGTFQDLPPGEADQGE*
Ga0070665_10108057023300005548Switchgrass RhizosphereMTQSHNLPLDPDTVAEIAPGEGPEPGSVEYGGSEIHVDGAGSGARGPAAGDSVTTEAGTFEDLPVGEADQGE*
Ga0070665_10227803413300005548Switchgrass RhizosphereMTESQHPPVDPDTVAEIAPGEGPEPGSVEYGGSEIHRDGAGGSTGSGSGVTTEAGTFEELPVTPDEQVE*
Ga0068857_10155054813300005577Corn RhizosphereRMSQSHKPPIDPDTVAEIAPGEGPEPGSVEYGGSEIHREGAGSGASAPAGGEAVTTEAGTFQDLPVGEDDQGE*
Ga0070702_10022114213300005615Corn, Switchgrass And Miscanthus RhizosphereMSQSHKPPIDPDTVAEIAPGEGPEPGSVEYGGSEIHQEGAGSGAPASQGGEAVTTEAGTFQDLPPGEADQGE*
Ga0068859_10250411813300005617Switchgrass RhizosphereRIGHTEGDDRMTQSHNLPLDPDTVAEIAPGEGPEPGSVEYGGSEIHADGAGSGAGGPAAGDSVTTEAGTFEELPVGEADQGE*
Ga0068864_10246368323300005618Switchgrass RhizosphereHNSPLDPDTVAEVAPGEGPEPGSVEYGGSEIHKEGAGSGAPASQSGEAVTTEAGTFQDLPPGEADQGE*
Ga0079222_1048315323300006755Agricultural SoilMSQSQNSPLDPDTVAEVAPGEGPEPGSVEYGGSEIHQEGAGSGAPASQGGEAVTTEAGTFQDLPPGEADQGE*
Ga0075428_10056996723300006844Populus RhizosphereMSQSHNPPIDPDTVAEIAPGEGPEPGSVEYGGSEIHREGAGSGARAPAGGEAVTTEAGTFQDLPVGEDDQGE*
Ga0075421_10071169823300006845Populus RhizosphereMTQSHQPPIDPDTVAEIAPGEGPEPGSVEYGGSEIHKEGAGSGTPIPIGGEAVTTEAGTFQDLPVGEDDQGE*
Ga0097620_10250501823300006931Switchgrass RhizosphereMTQSHNLPLDPDTVAEIAPGEGPEPGSVEYGGSEIHADGAGSGAGGPAAGDSVTTEAGTFEELPVGEADQGE*
Ga0105679_1029796913300007790SoilMAENTPVDPDTVAEVAPGQGEEPGSVYYGGSEIHQDGAGEGAAAGAAADAPSESATTEAGTFEELPLGTDDKGATGD*
Ga0105245_1011571423300009098Miscanthus RhizosphereMSQSHNSPLDPDTVAEVAPGEGPEPGSVEYGGSESHKEGAGSGAPASQSGEPVTTEAGTFQDLPPGEADQGE*
Ga0105245_1017781223300009098Miscanthus RhizosphereMTQSQHPVDPTTVAEIAPGEGPEPGSVEYGGSEIHGEDVGAGAPAGAGGAVTTEAGTFEDLPVTPDEQGD*
Ga0105245_1024611423300009098Miscanthus RhizosphereMTQSHNLPLDPDTVAEIAPGEGPEPGSVEYGGSEIHADGAGSGAGGPAASDSVTTEAGTFEDLPVGEADQGE*
Ga0105245_1244442723300009098Miscanthus RhizosphereMSQSHNPPIDPDTVAEIAPGEGPEPGSVEYGGSEIHREGAGSGARAPAGGEAVTTEVGTLQDLPVGEDDQGE*
Ga0105247_1086537713300009101Switchgrass RhizosphereMSQSQNSPLDPDTVAEVAPGEGPEPGSVEYGGSEIHQEGAGSGAPASQGGKAVTTEAGTFQDLPPGEADQGE*
Ga0111538_1271733023300009156Populus RhizosphereMTQSHNLPLDPDTVAEIAPGEGPEPGSVEYGGSEIHADGAGSGAGGPAAGDSVTTEVGTFEELPPGEEDRGD*
Ga0105242_1199595613300009176Miscanthus RhizosphereMSQSHNSPLDPDTVAEVAPGEGPEPGSVEYGGSEIHQEGAGSGAPASQGGEAVTTEAGTFEDLPPGEEDQGE*
Ga0105248_1310243223300009177Switchgrass RhizosphereMTQSHNLPLDPDTVAEIAPGEGPEPGSVEYGGSEIHADGAGSGAGGPAAGDSVTTEAGTFEELPVGEA
Ga0105249_1273947513300009553Switchgrass RhizosphereMSQSHNSPLDPDTVAEVAPGEGPEPGSVEYGGSEIHREGAGSGASAPAGGEAVTTEAGTFQDLPVGEDDQGE*
Ga0126307_1051891233300009789Serpentine SoilMTTPQQPPVDPDAVAEVAPGQGPEPGSAYYGGSEIHRDGAGESAPAEGQQDLTTEAGTFQDLPVSPDEQVE*
Ga0126305_1095395723300010036Serpentine SoilSQHPPTDPDTVAEIAPGEGAEPGSTYYGGSEIHDDRVGQDAASSGDSASGGSATTEAGTFEDLPVTSEDEGE*
Ga0126309_1058822523300010039Serpentine SoilMTSSQHPPTDPDTVAEIAPGEGAEPGSTYYGGSEIHDDHVGEGAEAAGDPAAGGSAAGESVTTEAGTFEDLPVTSEDEGE*
Ga0126321_137593223300010145SoilMSQSSEPPIDPDTVAEIAPGQGAEPGSVEYGGSEIHRDGAGAGAPSDEGGSITTEAGTFSDLPVSPDEQVE*
Ga0134126_1162457813300010396Terrestrial SoilMSQSHNSPLDPDTVAEVAPGEGPEPGSVEYGGSEIHQEGAGSGAPASQGGEAVTTEAGTFEDLPVGEADQGE*
Ga0164303_1078121113300012957SoilMTQSHNPPLDPDTVAEIAPGEGPEPGSVEYGGSEIHADGAGSGARGPTAGDSVTTEAGTFEELPVGEADQGE*
Ga0164304_1125550413300012986SoilMTQSQHPVDPTTVAEIAPGEGPEPGSVEYGGSEIALEGAGEGTAPDDTGAAVVSEAGIFEALPVTPDEQVE*
Ga0164305_1191034213300012989SoilMTQSHNLPLDPDTVAEIAPGEGPEPGSVEYGGSEIHADGAGSGAGGPAAGDSVTTEAGTFDDLPVGEADQGE*
Ga0157371_1073136713300013102Corn RhizosphereVGIGRTEGDGRMSQSHNSPLDPDTVAEVAPGEGPEPGSVEYGGSEIHQEGAGSGAPASQGGEAVTTEAGTFQDLPPGEADQGE*
Ga0157369_1027325923300013105Corn RhizosphereMSQSQNSPLDPDTVAEVAPGEGPEPGSVEYGGSEIHKEGAGSGARASQSGEAVTTEAGTFQDLPPGEADQGE*
Ga0157380_1078727413300014326Switchgrass RhizosphereMSQSHKPPIDPDTVAEIAPGEGPEPGSVEYGGSEIHREGAGSGASAPAGGEAVTTEAGTFQDLPVGEDDQGE*
Ga0182000_1020138013300014487SoilMTSSQHPPTDPDTVAEIAPGEGAEPGSTYYGGSEIHDDRVGQGSATAGDPGTGGSATTEAGTFEDLPVTAEEQGE*
Ga0157379_1111190923300014968Switchgrass RhizosphereMSQSQNSPLDPDTVAEVAPGEGPEPGSVEYGGSEIHKEGAGSGAPASQSGEAVTTEAGTFQDLPPGEADQGE*
Ga0132258_1058730923300015371Arabidopsis RhizosphereMRCLGPVVRVRIGHTEGDGRMSQSHNLPLDPDTVAEIAPGEGPEPGSVEYGGSEIHADGAGSGARAPAAGDSVTTEAGTFEDLPVGEADQGE*
Ga0132255_10021175813300015374Arabidopsis RhizosphereMRCLGPVVRVRIGHTEGDGRMSQSHNLPLDPDTVAEIAPGEGPEPGSVEYGGSEIHADGAGSAAGGDAVTTEAGTFEDLPVGEAVQGE*
Ga0190275_1000233033300018432SoilMSQSHNPPIDPDTVAEIAPGEGPEPGSVEYGGSEIHREGAGSGTSASAGGEAVTTEAGTFQDLPVGEDDQGE
Ga0190269_1203258313300018465SoilMTQSQHPPIDPDTVAEIAPGEGPEAGSVEYGGSEIHADGAGEGASSAGGSAPTGPVTTEAGTFEDLPVTPDEQVE
Ga0190268_1000614733300018466SoilMTTPQQPPVDPDAVAEVAPGQGPEPGSAYYGGSEIHRDGAGESAPAEGQQDLTTEAGTFQDLPVSPDEQVE
Ga0190268_1038366413300018466SoilMTQSQHPPTDPDTVAEIAPGEGAEPGSTYYGGSEIHDDRVGQGSTTTGDSGTGGSATTEAGTFEDLPVTAEEQGE
Ga0190268_1178551313300018466SoilMTQSQHPPIDPDTVAEIAPGEGPEPGSVEYGGSEIHKDGAGSGMPIPIGGEAVTTEAGTFQDLPVDEEDQGE
Ga0190271_1097148313300018481SoilMSQSHKPPIDPDTVAEIAPGEGPEPGSVEYGGSEIHREGAGSGASAPAGGEAVTTEAGTFQDLPVGEDDQGE
Ga0190273_1024195133300018920SoilMTQSQHPPIDPDTVAEIAPGEGPEPGSVEYGGSEIHADGAGEGASSAGGSVTPGSVTTEAGTFEDLPVIPEEQGD
Ga0190273_1051960823300018920SoilMTQSQHPPTDPDTVAEIAPGEGAEPGSTYYGGSEIHDDRVGQGSASAGDSGTGGSATTEAGTFEDLPVTSEDEGE
Ga0190273_1074574823300018920SoilMTSSQHPPTDPDTVAEIAPGEGAEPGSTYYGGSEIHDDRVGQGSATTGDSGTGGSATTEAGTFEDLPVTAEEQGE
Ga0190273_1075968323300018920SoilMTQSQQPPIDPDTVAEIAPGEGPEAGSTYYGGSEIHQDGAGESATSEAGTAGPVTTEAGTFEDLPVAPDEQGD
Ga0190273_1104737513300018920SoilMSQSHKPPIDPDTVAEIAPGEGPEPGSVEYGGSEIHREGAGSGTSASAGGEAVTTEAGTFQDLPVGEDDQGE
Ga0190273_1227084313300018920SoilMTQSQQPPIDPDTVAEIAPGEGPEPGSVEYGGSEIHADGAGEGSTPSGASDSGTTGAVTTEAGTFEALPVAPEEQGD
Ga0190267_1010527623300019767SoilMTSSQHPPTDPDTVAEIAPGEGAEAGSVEYGGSEIHDDRVGQDAASAGESASDSASGGSATTEAGTFEDLPVTSEDEGE
Ga0190267_1153175513300019767SoilMTSSQHPPTDPDTVAEIAPGEGAEPGSTYYGGSEIHDDRVGQGPATTGDSGTGGSATTEAGTFEDLPVTAEEQGE
Ga0206349_171304313300020075Corn, Switchgrass And Miscanthus RhizosphereGDGRMSQSHNSPLDPDTVAEVAPGEGPEPGSVEYGGSEIHQEGAGSGAPASQGGEAVTTEAGTFQDLPPGEADQGE
Ga0206350_1157922813300020080Corn, Switchgrass And Miscanthus RhizosphereRMSQSHNSPLDPDTVAEVAPGEGPEPGSVEYGGSEIHQEGAGSGAPASQGGEAVTTEAGTFQDLPPGEADQGE
Ga0206353_1138558623300020082Corn, Switchgrass And Miscanthus RhizosphereMSQSHNSPLDPDTVAEVAPGEGPEPGSVEYGGSEIHQEGAGSGAPASQGGEAVTTEAGTFQDLPPGEADQGE
Ga0196960_1009273723300024426SoilMTQSHNPPTDPDTVAEIAPGEGPEPGSVEYGGSEIHADGAGSGGEQAGDGDSVTTEAGTFEELPVSEADRGE
Ga0196962_1005150423300024430SoilMTQSQHPPIDPDTVAEIAPGEGPEPGSVEYGGSEIHADRAGEGSSPSGAGGGPVTTEAGTFEDLPVTPDEQVE
Ga0207710_1030519823300025900Switchgrass RhizosphereMSQSQNSPLDPDTVAEVAPGEGPEPGSVEYGGSEIHQEGAGSGAPASQGGKAVTTEAGTFQDLPPGEADQGE
Ga0207688_1001218643300025901Corn, Switchgrass And Miscanthus RhizosphereMSQSHNSPLDPDTVAEVAPGEGPEPGSVEYGGSEIHKEGAGSGARASQSGEAVTTEAGTFQDLPPGEADQGE
Ga0207643_1006344613300025908Miscanthus RhizosphereMSQSHNPPIDPDTVAEIAPGEGPEPGSVEYGGSEIHREGAGSGARAPAGGEAVTTEAGTFQDLP
Ga0207687_1016828323300025927Miscanthus RhizosphereMTQSQHPVDPTTVAEIAPGEGPEPGSVEYGGSEIHGEDVGAGAPAGAGGAVTTEAGTFEDLPVTPDEQGD
Ga0207687_1090927923300025927Miscanthus RhizosphereMSQSHNSPLDPDTVAEVAPGEGPEPGSVEYGGSEIHKEGAGSGAPASQSGEAVTTEAGTFQDLPPGEADQGE
Ga0207691_1058184823300025940Miscanthus RhizosphereMSQSHNSPLDPDTVAEVAPGEGPEPGSVEYGGSEIHQEGAGSGAPASQSGEAVTTEAGTFQDLPPGEADQGE
Ga0207640_1014684923300025981Corn RhizosphereMSQSHNSPLDPDTVAEVAPGEGPEPCSVEYGGSEIHQEGAGSGAPASQGGEAVTTEAGTFQDLPPGEADQGE
Ga0207639_1171682613300026041Corn RhizosphereMSQSHNSPLDPDTVAEVAPGEGPEPGSVEYGGSEIHKEGAGSGAPASQGGEAVTTEAGTFQDLPPGEADQGE
Ga0207708_1154291413300026075Corn, Switchgrass And Miscanthus RhizosphereMTQSHNLPLDPDTVAEIAPGEGPEPGSVEYGGSEIHVDGAGSGARGPAAGDSVTTEAGTFEDLPVGEADQGE
Ga0207702_1197687513300026078Corn RhizosphereMSQSQNSPLDPDTVAEVAPGEGPEPGSVEYGGSEIHKEGAGSGAPASQSGEAVTTEAGTFQDLPPGEADQGE
Ga0207683_1139632113300026121Miscanthus RhizosphereMTQSQHPIDPSTVAEIAPGEGPEPGSVEYGGSEIHGDEVGADAPAGSGGAVTTEAGTFEDLPVTPDEQGD
Ga0209461_1003093813300027750AgaveMTQSQNPPTDPDTVAEIAPGQGPEPGSVEYGGSEIHTDAVDADAGGSSDAGGQAVTTEAGTFEDLPVTAEEQGD
Ga0209177_1043827313300027775Agricultural SoilMTQPQHPVDPSTVAEVAPGEGPEPGSVEYGGSEIHAEGVGAAKALTSEAGTFEDLPVTPD
Ga0209481_1036747023300027880Populus RhizosphereMTQSHQPPIDPDTVAEIAPGEGPEPGSVEYGGSEIHKEGAGSGTPIPIGGEAVTTEAGTFQDLPVGEDDQGE
Ga0207428_1087273823300027907Populus RhizosphereMSQSQNSPLDPDTVAEVAPGEGPEPGSVEYGGSEIHQEGAGSGAPASQGGEAVTTEAGTFQDLPPGEADQGE
Ga0247828_1054274013300028587SoilVRVRIGHTEGDDRMTQSHNLPLDPDTVAEIAPGEGPEPGSVEYGGSEIHADGAGSGAGRAAAGDSVTTEAGTFEDLPVGEADQGE
Ga0247822_1065097823300028592SoilMSQSHNSPLDPDTVAEVAPGEGPEPGSVEYGGSEIHKEGAGSGAPASQSGEAVTTEAGTF
Ga0247822_1169659423300028592SoilMTQSQHPPIDPDTVAEIAPGEGPEPGSVEYGGSEIHKEGAGSGTPIPIGGEAVTTEAGTFQDLPVGEDDQGE
Ga0247821_1023285813300028596SoilMSQSHKPPIDPDTVAEIAPGEGPEPGSVEYGGSEIHREGAGSGASAPAGGEAVTTEAGTFQD
Ga0307276_1004044813300028705SoilYACGMTQSQHPIDPNIVAEVAPGEGPEPGSVEYGGSEIHADGAGVDAATDAPAGAGGGVTSEAGTFEDLPVTPDEQVE
Ga0247826_1085603023300030336SoilMSQSHKPPIDPDTVAEIAPGEGPEPGSVEYGGSEIHREGAGSGASASAGGEAVTTEAGTFQDLPVGEDDQGE
Ga0310907_1024476813300031847SoilNLPLDPDTVAEIAPGEGPEPGSVEYGGSEIHADGAGSGARAPAAGDSVTTEAGTFEDLPVGEADQGE
Ga0310904_1006657513300031854SoilRMSQSHNLPLDPDTVAEIAPGEGPEPGSVEYGGSEIHADGAGSGARAPAAGDSVTTEAGTFEDLPVGEADQGE
Ga0307407_1150333013300031903RhizosphereMTQSQKPPIDPDTVAEIAPGQGPEPGSVEYGGSEIHGDDVDTGAGGSSDAGDQAVTTEAGTFEDLPVTAEEQGD
Ga0310900_1012871723300031908SoilMSQSHNLPLDPDTVAEIAPGEGPEPGSVEYGGSEIHADGAGSGARGPAAGDSVTTEAGTFEDLPVGEADQGE
Ga0308175_10001232623300031938SoilMTQSHNLPLDPDTVAEIAPGEGPEPGSVEYGGSEIHADGAGSGAGGPAAGDSVTTEAGTFEELPVGEADQGE
Ga0308175_10183572423300031938SoilTVAEIAPGDGPEPGSVEYGGSEIHADDAGEGAGPAGGGSVTTEAGTFEELPVTPDEQVE
Ga0310902_1008894923300032012SoilMSQSHNLPLDPDTVAEIAPGEGPEPGSVEYGGSEIHADGAGSGARAPAAGDSVTTEAGTFEDLPVGEADQGE
Ga0308173_1079577813300032074SoilMTQSHNLPLDPDTVAEIAPGEGPEPGSVEYGGSEIHADGAGSGAGGPAAGDSVTTEAGTFEELPVGE
Ga0308173_1143132813300032074SoilMTESQHPPVDPDTVAEIAPGEGPEPGSVEYGGSEIHRDGAGGSTGSGSGVTTEAGTFEELPVTPDEQVE
Ga0326721_1109799413300032080SoilMSQSHNPPIDPDTVAEIAPGEGPEPGSVEYGGSEIHRDGVGSGPSASAGGEAVTTEAGTFQDLPVDEEDQGE
Ga0247829_1051729323300033550SoilMTQSHNLPLDPDTVAEIAPGEGPEPGSVEYGGSEIHADGAGSGAGGPAAGDSVTTEAGTFEDLPVGEADQGE
Ga0247830_1010088023300033551SoilMSQSHNPPIDPDTVAEIAPGEGPEPGSVEYGGSEIHREGAGSGARAPAGGEAVTTEAGTFQDLPVGEDDQGE
Ga0334918_027041_130_3663300034000Hypolithic BiocrustMTQSQHPPTDPDTVAEIAPGEGPEPGSVEYGGSEIHDDHVGEGAESADGSGGPAAEESVTTEAGTFEDLPVTADEQVE
Ga0334925_034088_921_11183300034173Hypolithic BiocrustMTQSQHPVDPDTVAEVAPGEGPEPGSVEYGGSEIAAGLPGAGTGGGPVTTEAGTFEDLPVTPDEQV
Ga0334925_094613_411_6443300034173Hypolithic BiocrustMTQSQQQPIDPDAVAEIAPGDGPEPGSAYYGGSEIHSDSVDESAETGSGGGSPDAGEAVTTEAGTFEDLPVTPDEQVE
Ga0314794_171944_203_4213300034669SoilMTQSHQPPIDPDTVAEIAPGEGPEPGSVEYGGSEIHKEGAGSGTPIPIGGEAVTTEAGTFQDLPVGVDDQGE

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.