NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F097070

Metagenome / Metatranscriptome Family F097070

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F097070
Family Type Metagenome / Metatranscriptome
Number of Sequences 104
Average Sequence Length 61 residues
Representative Sequence MKQFKLSSKRKSSGQVVVLLIIVLALLGGAWWWLNSNKESAAKEGTAFAKEAIQKIAVQ
Number of Associated Samples 92
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.96 %
% of genes from short scaffolds (< 2000 bps) 0.96 %
Associated GOLD sequencing projects 89
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (99.038 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(16.346 % of family members)
Environment Ontology (ENVO) Unclassified
(21.154 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(53.846 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 54.02%    β-sheet: 0.00%    Coil/Unstructured: 45.98%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF16491Peptidase_M48_N 10.58
PF01435Peptidase_M48 0.96
PF00903Glyoxalase 0.96



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A99.04 %
All OrganismsrootAll Organisms0.96 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300012948|Ga0126375_11460927All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia582Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil16.35%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil14.42%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.73%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.85%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.88%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere2.88%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.88%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.88%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.92%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.92%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.92%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.92%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere1.92%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.92%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.92%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere1.92%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.92%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.96%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.96%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.96%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.96%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.96%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.96%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.96%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.96%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.96%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.96%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.96%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.96%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.96%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459005Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cmEnvironmentalOpen in IMG/M
2209111022Grass soil microbial communities from Rothamsted Park, UK - Chitin enrichmentEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003911Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300003990Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004268Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBioEnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012892Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1EnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013096Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2EnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013503Permafrost microbial communities from Nunavut, Canada - A23_5cm_12MEnvironmentalOpen in IMG/M
3300013770Permafrost microbial communities from Nunavut, Canada - A15_5cm_18MEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019878Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2EnvironmentalOpen in IMG/M
3300019885Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2EnvironmentalOpen in IMG/M
3300020002Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1EnvironmentalOpen in IMG/M
3300020062Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1EnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300027050Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300030973Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB6 Emin (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E41_018783602170459005Grass SoilMKQFKLSSKRKSSGQVVVLLIIVLALLGGAWWYLNSNKQSAAKEGTGFAKDAIQKIAVQHDINF
22220166182209111022Grass SoilMKQFKLSSKRKSSGQVVVLLIIVLALLGGAWWWLNSNKENAANEGTAFAKEATQKIAVQHDINFFNSRLSPQAA
JGI1027J12803_10204656613300000955SoilMKQFKLSSKQKSSGQVVVLLIIVLALLGGAWWWLNSNKENSAKEGRDFANE
C688J35102_11968582313300002568SoilMKQLKLNSKQNSSGQVVVLIVIVLALVGVAWWWLNSQKQASAKEGTVFAHEAIQRIAV
JGI25405J52794_1013594423300003911Tabebuia Heterophylla RhizosphereMKMKQFKLSSKRKSSGQVVVLLIIVLALLGGAWWWLNSNKQDSAKEGRDFANEAFQKIAVQHDINFFN
Ga0055455_1019314913300003990Natural And Restored WetlandsMKQLKLNSNRESSGQVIVVLIIVLVLLFGAWWWLNSQRQASAKEGRAFAKQAIEQI
Ga0063454_10054137623300004081SoilMKQFKLSSKRKSSGQVVVLLIIVLALLGGAWWWLNSNKENAAKEGTVFARDAIQKIAVQHDAN
Ga0063455_10042047533300004153SoilMKPFKLSSKRKSSGQIIVLLIIVLALLGGAWWWLNSNKENAAREGTAFARE
Ga0066398_1019511613300004268Tropical Forest SoilMKQFKLSSKRNSSGQVVVLVIIVLALLGGAWWWLNSNKQNAVKEGTDFAREAT
Ga0062591_10184651813300004643SoilMKQFKLSSKRKSSGQVIVLLIIVLALLGGAWWWMNSNKESAAKEGTAFAREAIQKIAVQ
Ga0066676_1005644133300005186SoilMKQFKLSSKQKSSGQVVVLLIIVVALLGGAWWWLYSNKENAAKEGTGFAKEAIQKIAVQHDANFFNS
Ga0065715_1021383513300005293Miscanthus RhizosphereMKQLKLSSKHKTSGQVVVLLIIVLALLGGAWWWLNSSKENSAKEGTQFAKEAFQKIAVQHDANFFNSRLSPQARV
Ga0065705_1002416813300005294Switchgrass RhizosphereMKQFKSSSKQKSSGQVVVLLIIVLALLGGAWWWLNSSKQTSAKEGRDFANEAFQKIAVQHDINFFNSRLSP
Ga0065705_1077503123300005294Switchgrass RhizosphereMKQFKLSSKRKSSGQVVVLLIIVLALLGGAWWWLNSSKENAAKEGTAFAKEAFQKIAVQHDGNFFISRLS
Ga0065707_1079164813300005295Switchgrass RhizosphereMKMKQFKLSSKRKSSGQVVVLLIIVLALLGGAWWWLNSNKENSAKEGRDFANEA
Ga0070710_1071406023300005437Corn, Switchgrass And Miscanthus RhizosphereMKQFKLSSKRKSSGQVVVLLIIVLALLGGAWWWLNSNKENAAREGAAFAREATQKIAVQHDINYFN
Ga0070663_10067517013300005455Corn RhizosphereMKMKQLKLSSKRRSSGQVVVLLIIVLALAGGAWWWLNSSKENSAKEGRDFANEAI
Ga0070664_10136125123300005564Corn RhizosphereMKQFKLSSKRKSSGQVVVLLIIVLALLGGAWWYMNSNKQNSEKEGKDFANEVFQKIAVQHDIN
Ga0068864_10189617223300005618Switchgrass RhizosphereMKMKQLKLSSKRRSSGQVVVLLIIVLALAGGAWWWLNSSKENSAKEGRDFANEAIQKIAVQHDGNFFISRLSPQMR
Ga0066903_10193228213300005764Tropical Forest SoilMKQLKLSSKRKSSGQVVVLLIIVLALLGGAWWYMSSNKQNSAKEGKDFANEAFQKI
Ga0081455_1035479533300005937Tabebuia Heterophylla RhizosphereMKQFKLSSKRKSSGQVLVVLIILVLLLVGAWWWLNSNKLSSAKEGRDFANEAIQKIA
Ga0066656_1039765813300006034SoilMKQFKLSSKQKSSGQVVVLLIIVVALLGGAWWWLYSNKENAAKEGTGFAKEAFQKIAVQH
Ga0079222_1268378513300006755Agricultural SoilMKKFKLSSKRNTSGQVVAIVIILVLLLVGAWWWLNSNKESSAKEGRDFANE
Ga0075425_10056853813300006854Populus RhizosphereMKQLKLSSKRKSSGQVLVVLIILVLLLVGAWWWLNSNKQNSAKEGRDFANEAVQKIA
Ga0099829_1101426823300009038Vadose Zone SoilMKQFKLNSKRKSSGQVVVLLIIVLALLGGAWWLLNSNKENADKEGTAFARDAFQKIAVQHDANFFNSRLSP
Ga0075418_1183568223300009100Populus RhizosphereMKQFKLSSKRKTSGQVVAVVIILVLLLGGAWWWMNSNKQNSAKEGRDFANEAFQKIAVQHDINFF
Ga0105248_1058551633300009177Switchgrass RhizosphereMKQFKLSSKRKSSGQVIVLLIIVLALLGGAWWWMNSNKESAAKEGTAFARAAIQKTAV
Ga0105248_1293305213300009177Switchgrass RhizosphereMKQFKLSSKRKSSGQIIVLLIIVLALLGGAWWYLNSNKENAAREGTAFAREAIQKIAVQHDINFFNSRLSPQA
Ga0126315_1105232423300010038Serpentine SoilMKQFKLSSKQKSSGQVVVLLIIVLALLGGAWWWLHSTKENAAKEGTAFAKEAIQKI
Ga0126314_1137283213300010042Serpentine SoilMKQFKLSSKRKSSGQVVVLLIIVLALLGGAWWWLNSNKENAAREGTAFAKDAFQKIAVQHDAN
Ga0126380_1198781113300010043Tropical Forest SoilMKQFKLSSKRNSSGQVVVLVIIVLALLGGAWWWLNSNKQNAVKEGTDFAREATQKIAVQHDIN
Ga0126384_1014736213300010046Tropical Forest SoilMKQFKLSSKRKSSGQVVVLLIIVLALLGGAWWWLNSKKENSVKQGRDFANEAVQKIAVQHDGNFFISR
Ga0126382_1015454133300010047Tropical Forest SoilMKQFKLSSKRKTSGQVVVLVIIVLALLGGAWWWLNSNKQNSAKEGRDFANEAFQKIAVQH
Ga0134062_1033312333300010337Grasslands SoilMKQLKKSSKQKSSGQVVVVLIIVLALLGGAWWYLNSNKESAAKEGTSFAKDAVQKIAVQH
Ga0126370_1058429613300010358Tropical Forest SoilMKQFKLSSKRKSSGQVVVLVIIVLALLGGAWWWLNSNKQNAVKEGTDFAKEAIQKIGVQHDSNF
Ga0126370_1238147013300010358Tropical Forest SoilMKEFKLSSKRKSSGQVVVLVIIVLVLLGGAWWWLNGQKMASAKEGTDFAREAVQKIGVQHDINFFNSRL
Ga0126376_1068770933300010359Tropical Forest SoilMKMKQFKLSSKRKSSGQVVELVIIVLGMIGVALWWLYYNKQGMANEGNDFDNEAKQRI
Ga0126377_1301913023300010362Tropical Forest SoilMKKLKLSSKRKSSGQVVVLVIIVLVLLGGAWWWLNSNKENSAQEGRDFAKEAFQKIAV
Ga0126381_10170938533300010376Tropical Forest SoilMKKFKLSSKRKSSGQVVVLVIIVLVLLGGAWWWLNGQKMASAKEGTDFARE
Ga0134124_1033732613300010397Terrestrial SoilMKMKQLKLSSKRRSSGQVVVLLIIVLALAGGAWWWLNSSKENSAKEGRDFANEAIQKIAVQHDGNFFISRLS
Ga0134124_1065096633300010397Terrestrial SoilMKQFKLSSKRKSSGQVVVLLIIVLALAGGAWWWLNSSKENSAKEGRDFA
Ga0126383_1252671513300010398Tropical Forest SoilMKQLKLSSKRKSSGQVVVLVIIVLVLLGGAWWWLYSQKENSAKEGTDFANEAIQKIAVQHDINFF
Ga0150985_11658819213300012212Avena Fatua RhizosphereMKQFQKSSKQKSSGQVVVVLIIVLALLGGAWWYLNSNKESAAKEGTSFAKDAVQKIAVQHDINFFNS
Ga0137370_1071372613300012285Vadose Zone SoilMKQFKLSSKQKSSGQVVVLLIIVVALLGGAWWWLYSNKENAAKEGTGFAKEAFQKIAVQHDANFFN
Ga0137366_1087588523300012354Vadose Zone SoilMKQFKLSSKRKSSGQVVVLLIIVLALLGGAWWYLNSNKQNSAKEGKDFANEAFKKIAVQHDINFFNSRLSPQ
Ga0150984_11211663423300012469Avena Fatua RhizosphereMKQLKLNSKQNSSGQVVVLIVIVLALVGVAWWWLNSQKQASAKEGTVFAHEAIQRIAVQHDINFFNSRLS
Ga0157294_1002235313300012892SoilMKQFKLSSKRKSSGQVIVLLIIVLALLGGAWWWMNSNKESAAKEGTAFAREAIQKI
Ga0137396_1107947213300012918Vadose Zone SoilMKMKQLKLNSKRKSSGQVVVLLIIVVGLLFGAWWWLNSQKQASAKEGTAFAKEAIQRIAVQHDINFFNSRLSPQA
Ga0137404_1043603933300012929Vadose Zone SoilMKQFKLSSKRKSSGQVVVLLIIVLALLGGAWWWLNSNKENAAREGTGFAKEAFQKI
Ga0137407_1110850723300012930Vadose Zone SoilMKMKQLKLNSKRNSSGQVVVLLIIVLALLGGAWWWLNSNKENAAREGTGFAKEAFQKIGVQH
Ga0137410_1103752623300012944Vadose Zone SoilMKQFKLNSKRKSSGQVVVLIIIVLALLGGAWWWLNSNKENAAKEGTAFAKEAFQKIAVQHDA
Ga0126375_1078277713300012948Tropical Forest SoilMKQFKLSSTRKSSGQVVVLLIIVLALLGGVWWWLNSQKQASAKEGRDFANEAFQKIA
Ga0126375_1146092713300012948Tropical Forest SoilMKRLKLNSQRNSSGQVVVLLIIVLGLLGVAFWYLYSNKQAMAKEGNDFARDAIQRIVVQHDINFFNSR
Ga0126375_1159219413300012948Tropical Forest SoilMKQFKLSSKRKSSGQVVVLVIIVLALLGGAWWWLNSNKQNAVKEGTDFAKEAIQKIG
Ga0126375_1189760023300012948Tropical Forest SoilMKMKQFKLSSKRKSSGQVVVLVIIVLVLLGGAWWWLNSNKQNSAKEGKDFANEAIQKIGVQHDINFFNSRLSPQA
Ga0164301_1022888013300012960SoilMKQFKLSSKRKSSGQVVVLLIIVLALLGGAWWWLNSNKENAAREGAAFARDATQKIAVQH
Ga0164301_1024730513300012960SoilMKQFKLSSKRKSSGQVVVLLIIVLALLGGAWWWLNSNKENAAREGAAFARDATQKIAVQHDINYFN
Ga0164301_1129325813300012960SoilMKMKQFRLTSKRESSGQVIVVLIILLALASGAWWWLNSNKESAAKEGTAFA
Ga0126369_1231261123300012971Tropical Forest SoilMKKFKLSSKRKSSGQVVVLLIIVLVLLGGAWWYLNSQKAASAKEGTDFAGQAIQKI
Ga0126369_1321174623300012971Tropical Forest SoilMKKFKLNSKRKLSGQVVVLVIIVLVLLGGAWWYLNSQKQMSAKEGTDFAREAIQKIGVQHDI
Ga0164304_1033288313300012986SoilMKQLKLSSKHKTSGQVVVLLIIVLALLGGAWWWLNSNKENSAKEGRDFANEAIQKIAVQHDGNF
Ga0164307_1124784623300012987SoilMKQFKLSSKRKSSGQVVVLLIIVLALLGGAWWWLNSNKENSAKEGRDFANEAIQK
Ga0164306_1169611223300012988SoilMKQFKLSSKRQSSGQVVVLLIIVLALLGGAWWWLNSSKENSAKEGTQFAKE
Ga0157307_118597313300013096SoilMKQFKLSSKRKSSGQIIVLLIIVLALLGGAWWYLNSNKENAAREGTAFAREAIQKIAVQ
Ga0157374_1005605753300013296Miscanthus RhizosphereMKMKQFKLSSKRKTSGQVVVVLIILVALLCGAWWWLNSNKENSAKEGTDFAKEAVQKIAVQHDGNFFISRL
Ga0120127_1018823513300013503PermafrostMKQFKLSSKRKSSGQVVVLLIIVLALLGGAWWWLNSNKENAAKEGTQFGKEAIQKIAVQH
Ga0120123_101862133300013770PermafrostMKQFKLNSKRKSSGQVVVLLIIVLALLGGAWWWLNSNKENAAKEGTQFGKEAIQKIAVQHDANFFNSRLSPQ
Ga0134078_1011153333300014157Grasslands SoilMKQFKLSSKQKSSGQVVVLLIIVVALLGGAWWWLYSNKENAAKEGTGFAKEAF
Ga0182008_1034013023300014497RhizosphereMKQFKKSSKRKSSGQVVVLLIIVLALLGGAWWYLNSNKESAAKEGTSFAKDAVQKIAV
Ga0173480_1058820513300015200SoilMKQFKLSSKRKSSGQVIVLLIIVLALLGGAWWWMNSNKESAAKEGTAFAREAIQKIAVQHDINFFNSRL
Ga0134072_1026143323300015357Grasslands SoilMKQFKLSSKQKSSGQVVVLLIIVVALLGGAWWWLYSNKENAAKEGTGFAKEAFQ
Ga0132257_10355840723300015373Arabidopsis RhizosphereMKQFKLSSKRKSSGQVVVLLIIVLALLGGAWWWLNSNKENAAREGAAFARDATQKIAVQHDGN
Ga0182040_1055673633300016387SoilMKQFKLSSKRKSSGQVVVLVIIVLVLLGGAWWWLNSQKVNSAKEGTDFAREAVQ
Ga0182039_1156042813300016422SoilMKQFKLSSKRKSSGQVVVLLIIVLALLGGAWWWLNSNKQSSAKEGRDFANEAIQKIA
Ga0184608_1010765113300018028Groundwater SedimentMKMKQLKLNSKRKSSGQVVVLLIIVLALLGGAWWWLNSNKENAAREGVGFAKEAFQKI
Ga0184619_1002615043300018061Groundwater SedimentMKQFKLSSKRKSSGQVVVLLIIVLALLGGAWWWLNSSKESSAKEGRDFANEAFQKIAVQH
Ga0173481_1077573913300019356SoilMKQLKLSSKRKSSGQIIVLLIIVLALLGGAWWWLNSNKENAAREGAAFAREATQKIAVQHDINYFNS
Ga0193715_106290033300019878SoilMKQFKLSSKRKSSGQVVVLLIIVLALLGGAWWWLNSSKENSAREGTAFAKDAIQKIAVQHDINFFNSRL
Ga0193747_104817533300019885SoilMKQFKLSSKRKSSGQVVVLLIIVLALLGGAWWWLNSNKENAAREGIGFAKEAFQKIGVQHDANFF
Ga0193730_108589833300020002SoilMKMKQLKLNSKRNSSGQVVVLLIIVLALLGGAWWWLNSNKENAAKEGTAFAKEAFQKIGVQHDANF
Ga0193724_105330413300020062SoilMKQFKLSSKRKSSGQVVVLLIIVLALLGGAWWWLNSNKENAAREGTAFAREAIQKTAVQHDINY
Ga0210406_1060756833300021168SoilMKQLKLSSKRKSSGQIVVLLIIVLALLGGAWWWLNSNKENAVREGTAFARDAAQKIAVQHDINFFNSRLSPQ
Ga0210402_1196216313300021478SoilMKQLKLSSKRKSSGQIVVLLIIVLALLGGAWWWLNSNKENAVREGTAFARDAAQKIAVQ
Ga0222623_1032482323300022694Groundwater SedimentMKMKQLKLNSKRNSSGQVVVLLIIVLALLGGAWWWLNSNKENAGREGTNFAKEAFQKIAVQHDPNFFNSRLSP
Ga0207697_1001504753300025315Corn, Switchgrass And Miscanthus RhizosphereMKMKQFKLSSKRKTSGQVVVVLIILVALLCGAWWWLNSNKENSAKEGTDFAKEAVQKIAVQHDGNFFISR
Ga0207649_1136880023300025920Corn RhizosphereMKMKQLKLSSKRRSSGQVVVLLIIVLALAGGAWWWLNSSKENSAKEGRDFANEAIQKIAV
Ga0207701_1048114033300025930Corn, Switchgrass And Miscanthus RhizosphereMKQFKLSSKRKSSGQVVVLLIIVLALLGGAWWWLNSNKENAAREGTAFARDAMQKIAVQHDINFFNSRLS
Ga0207701_1095823113300025930Corn, Switchgrass And Miscanthus RhizosphereMKQFKLSSKRKSSGQVVVLLIIVLALLGGAWWWLNSSKENSAREGTAFARE
Ga0207708_1066101423300026075Corn, Switchgrass And Miscanthus RhizosphereMKQKLSSKRKSSGQIIVLLIIVLALLGGAWWWLNSNKENAAREGAAFAKEAIQKIAVQHDINFFN
Ga0209807_100800913300026530SoilMKQFKLSSKQRSSGQVVVVLIIVLALLGGAWWWLNSNKENAAREGTAFARDAV
Ga0209325_101353623300027050Forest SoilMKQLKLSSKRNSSGQVVVLVIIVLVLLGGAWWWLNSNKVNSAKEGRDFANEAIQKIAIQHDINFFNSRLS
Ga0307302_1015247633300028814SoilMKMKQLKLNSKRNSSGQVVVLLIIVLALLGGAWWWLNSNKENAAREGTAFAKEAFQKIGVQHDANF
Ga0307278_1042938013300028878SoilMKQFKLSSKRKSSGQVVVLLIIVLALLGGAWWWLNSNKENAAREGTGFAKEAFQKIGVQHDA
Ga0075395_1127266523300030973SoilMKQFKLSSKRKSSGQVVVLLIIVVALLVGAWWWLNSNKDNAAKEGTQFGKEAIQKIAISKSYM
Ga0306921_1059918033300031912SoilMKQLKLSSKRKSSGQVVVLLIIVLALLGGAWWYLNSNKQNSAREGRDFANEVFQKIAVQH
Ga0308174_1144050123300031939SoilMKQFKLSSKRKSSGQVIVLLIIVLALLGGAWWWMNSNKESAAKEGTAFAREAI
Ga0310885_1036780733300031943SoilMKMKQFKLSSKRKTSGQVVVVLIILVALLCGAWWWLNSNKETAAKEGRDFANEAIQK
Ga0306926_1102745113300031954SoilMKQFKLSSKRKSSGQVLVVLIILVLLLVGAWWWLNSNKQNSAKEGRDFANEAIQKIAVQHDINFF
Ga0310911_1038642013300032035SoilMKQFKLSSKRKSSGQVVVLVIIVLVLLGGAWWWLNSQKVASAKEGRDFANEAIQKIAVQH
Ga0310889_1011800233300032179SoilMKKIKLSSKRKSSGQVVVLLIIVLALLGGAWWWLNSNKESAAKEGTAFAKEAIQ
Ga0310889_1078869923300032179SoilMKQFKLSSKRKSSGQVVVLLIIVLALLGGAWWWLNSNKESAAKEGTAFAKEAIQKIAVQ
Ga0307471_10190852813300032180Hardwood Forest SoilMKMKQFKLSSKRKSSGQVVVLLIIVLALLGGAWWWLNSNKENSAKEGRDFANEAIQKIAVQHDGNFFISRLSPK
Ga0335080_1125541313300032828SoilMKKLKLNSKRKSSGQVIVLVIIVLVLLGGAYWYLDSTKQEMAREGTDFAK
Ga0310810_1117416323300033412SoilMKQFKLSSKRKSSGQVVVLLIIVLALLGGAWWWMNSNKQNSAKEGRDFA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.