Metagenome / Metatranscriptome Family F097067

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097067
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	44 residues
Representative Sequence	FDEELDRLLRESAKSNDAQVAATLREARGISEEMIRRGEFNPA
Number of Associated Samples	89
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.04 %
% of genes from short scaffolds (< 2000 bps)	84.62 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.538 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (43.269 % of family members)
Environment Ontology (ENVO)	Unclassified (39.423 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.231 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.07% β-sheet: 0.00% Coil/Unstructured: 54.93%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00463	ICL	84.62
PF00155	Aminotran_1_2	4.81
PF09859	Oxygenase-NA	0.96
PF00903	Glyoxalase	0.96
PF00069	Pkinase	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2224	Isocitrate lyase	Energy production and conversion [C]	84.62
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
All Organisms	root	All Organisms	38.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
cellular organisms	root	All Organisms → cellular organisms	38.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	16.35 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.85 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.73 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.81 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.73 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.85 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	2.88 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.92 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.96 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.73 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	3.85 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	2.88 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.92 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.96 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.73 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	3.85 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2.88 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	1.92 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.96 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.73 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	3.85 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2.88 %
Pseudomonas syringae group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group	0.96 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.96 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.96 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.73 %
Mycobacterium tuberculosis complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	3.85 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2.88 %
Pseudomonas syringae group genomosp. 2	species subgroup	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 2	0.96 %
uncultured Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium	0.96 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.96 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.73 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	3.85 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2.88 %
Pseudomonas savastanoi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 2 → Pseudomonas savastanoi	0.96 %
uncultured Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium	0.96 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.96 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10344299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	916	Open in IMG/M
3300002560\|JGI25383J37093_10187474	Not Available	545	Open in IMG/M
3300002907\|JGI25613J43889_10016414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	2069	Open in IMG/M
3300005181\|Ga0066678_10050760	All Organisms → cellular organisms → Bacteria → Acidobacteria	2363	Open in IMG/M
3300005184\|Ga0066671_10161912	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300005332\|Ga0066388_105542600	Not Available	639	Open in IMG/M
3300005518\|Ga0070699_101720843	Not Available	574	Open in IMG/M
3300005542\|Ga0070732_10492584	Not Available	742	Open in IMG/M
3300005554\|Ga0066661_10076552	All Organisms → cellular organisms → Bacteria	1964	Open in IMG/M
3300005554\|Ga0066661_10225923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1160	Open in IMG/M
3300005610\|Ga0070763_10888957	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300005764\|Ga0066903_100841109	All Organisms → cellular organisms → Bacteria	1649	Open in IMG/M
3300006057\|Ga0075026_100818574	Not Available	566	Open in IMG/M
3300006086\|Ga0075019_10901473	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300006791\|Ga0066653_10002109	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	5924	Open in IMG/M
3300006797\|Ga0066659_10117630	All Organisms → cellular organisms → Bacteria	1837	Open in IMG/M
3300006800\|Ga0066660_10935344	Not Available	703	Open in IMG/M
3300007258\|Ga0099793_10221777	Not Available	909	Open in IMG/M
3300007265\|Ga0099794_10011110	All Organisms → cellular organisms → Bacteria	3849	Open in IMG/M
3300007265\|Ga0099794_10743197	Not Available	524	Open in IMG/M
3300009038\|Ga0099829_10069506	All Organisms → cellular organisms → Bacteria	2667	Open in IMG/M
3300009038\|Ga0099829_10122445	All Organisms → cellular organisms → Bacteria	2049	Open in IMG/M
3300009038\|Ga0099829_10794432	Not Available	786	Open in IMG/M
3300009088\|Ga0099830_11113799	Not Available	655	Open in IMG/M
3300009088\|Ga0099830_11259947	Not Available	614	Open in IMG/M
3300009090\|Ga0099827_10705754	Not Available	872	Open in IMG/M
3300009143\|Ga0099792_10391019	Not Available	849	Open in IMG/M
3300010046\|Ga0126384_10584542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	975	Open in IMG/M
3300010303\|Ga0134082_10013713	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2939	Open in IMG/M
3300010358\|Ga0126370_11438784	Not Available	652	Open in IMG/M
3300010376\|Ga0126381_103999291	Not Available	574	Open in IMG/M
3300011120\|Ga0150983_15864128	Not Available	553	Open in IMG/M
3300011269\|Ga0137392_10993644	Not Available	689	Open in IMG/M
3300011271\|Ga0137393_10727258	Not Available	850	Open in IMG/M
3300012189\|Ga0137388_10908011	Not Available	814	Open in IMG/M
3300012199\|Ga0137383_10507740	Not Available	883	Open in IMG/M
3300012201\|Ga0137365_11164863	Not Available	553	Open in IMG/M
3300012202\|Ga0137363_11249149	Not Available	630	Open in IMG/M
3300012203\|Ga0137399_11726470	Not Available	514	Open in IMG/M
3300012205\|Ga0137362_10222104	Not Available	1629	Open in IMG/M
3300012205\|Ga0137362_11173416	Not Available	652	Open in IMG/M
3300012207\|Ga0137381_10728290	Not Available	861	Open in IMG/M
3300012209\|Ga0137379_10732003	Not Available	894	Open in IMG/M
3300012210\|Ga0137378_11181233	Not Available	681	Open in IMG/M
3300012349\|Ga0137387_10693941	Not Available	737	Open in IMG/M
3300012351\|Ga0137386_11221507	Not Available	525	Open in IMG/M
3300012683\|Ga0137398_10222290	Not Available	1251	Open in IMG/M
3300012685\|Ga0137397_10642833	Not Available	789	Open in IMG/M
3300012685\|Ga0137397_11276507	Not Available	524	Open in IMG/M
3300012917\|Ga0137395_10714973	Not Available	725	Open in IMG/M
3300012918\|Ga0137396_10713623	Not Available	739	Open in IMG/M
3300012929\|Ga0137404_10846613	Not Available	832	Open in IMG/M
3300012930\|Ga0137407_12228608	Not Available	523	Open in IMG/M
3300014154\|Ga0134075_10015535	All Organisms → cellular organisms → Bacteria → Acidobacteria	2980	Open in IMG/M
3300014157\|Ga0134078_10126477	All Organisms → cellular organisms → Bacteria → Acidobacteria	983	Open in IMG/M
3300014166\|Ga0134079_10387323	Not Available	646	Open in IMG/M
3300014489\|Ga0182018_10498145	Not Available	645	Open in IMG/M
3300015052\|Ga0137411_1139739	All Organisms → cellular organisms → Bacteria → Acidobacteria	3112	Open in IMG/M
3300015242\|Ga0137412_10746269	Not Available	724	Open in IMG/M
3300015245\|Ga0137409_10886673	Not Available	728	Open in IMG/M
3300016422\|Ga0182039_11386437	Not Available	638	Open in IMG/M
3300018088\|Ga0187771_11288330	Not Available	620	Open in IMG/M
3300018482\|Ga0066669_10016610	All Organisms → cellular organisms → Bacteria	3975	Open in IMG/M
3300019789\|Ga0137408_1088011	Not Available	750	Open in IMG/M
3300020199\|Ga0179592_10061018	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1721	Open in IMG/M
3300020579\|Ga0210407_10686832	Not Available	794	Open in IMG/M
3300021088\|Ga0210404_10778070	Not Available	546	Open in IMG/M
3300021168\|Ga0210406_10849350	Not Available	691	Open in IMG/M
3300021168\|Ga0210406_11045647	Not Available	605	Open in IMG/M
3300021170\|Ga0210400_10111409	All Organisms → cellular organisms → Bacteria	2176	Open in IMG/M
3300021402\|Ga0210385_10683649	Not Available	785	Open in IMG/M
3300021559\|Ga0210409_11464059	Not Available	559	Open in IMG/M
3300021560\|Ga0126371_11525472	Not Available	796	Open in IMG/M
3300024330\|Ga0137417_1299761	Not Available	989	Open in IMG/M
3300024330\|Ga0137417_1341910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	2017	Open in IMG/M
3300026277\|Ga0209350_1113137	Not Available	625	Open in IMG/M
3300026317\|Ga0209154_1291560	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300026322\|Ga0209687_1025268	All Organisms → cellular organisms → Bacteria	1940	Open in IMG/M
3300026335\|Ga0209804_1091511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1410	Open in IMG/M
3300026551\|Ga0209648_10792696	Not Available	518	Open in IMG/M
3300027671\|Ga0209588_1202196	Not Available	618	Open in IMG/M
3300027846\|Ga0209180_10001255	All Organisms → cellular organisms → Bacteria	12576	Open in IMG/M
3300027846\|Ga0209180_10073988	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium	1914	Open in IMG/M
3300027846\|Ga0209180_10276884	Not Available	963	Open in IMG/M
3300027862\|Ga0209701_10120813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 2 → Pseudomonas savastanoi	1623	Open in IMG/M
3300027889\|Ga0209380_10380028	Not Available	829	Open in IMG/M
3300027898\|Ga0209067_10962880	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300028536\|Ga0137415_10419585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1143	Open in IMG/M
3300030991\|Ga0073994_10043854	Not Available	889	Open in IMG/M
3300031718\|Ga0307474_11075309	Not Available	637	Open in IMG/M
3300031718\|Ga0307474_11151298	Not Available	614	Open in IMG/M
3300031754\|Ga0307475_11441085	Not Available	530	Open in IMG/M
3300031820\|Ga0307473_10121689	All Organisms → cellular organisms → Bacteria	1433	Open in IMG/M
3300031823\|Ga0307478_10192276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	1638	Open in IMG/M
3300031910\|Ga0306923_10274628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1928	Open in IMG/M
3300031941\|Ga0310912_10663595	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	809	Open in IMG/M
3300031941\|Ga0310912_11437047	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300031962\|Ga0307479_10025896	All Organisms → cellular organisms → Bacteria → Acidobacteria	5564	Open in IMG/M
3300031962\|Ga0307479_10110984	All Organisms → cellular organisms → Bacteria	2668	Open in IMG/M
3300032039\|Ga0318559_10330518	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	709	Open in IMG/M
3300032064\|Ga0318510_10424032	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	569	Open in IMG/M
3300032174\|Ga0307470_10986224	Not Available	669	Open in IMG/M
3300033158\|Ga0335077_11976316	Not Available	542	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.12%
Aquatic	Environmental → Aquatic	2.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.12%
Sediment	Environmental → Aquatic → Sediment	2.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.50%
Loam	Environmental → Terrestrial → Soil → Loam	6.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	51.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.15%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.96%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	43.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.62%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.96%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_103442991	3300001593	Forest Soil	ELIRDLFDEELDRLLRESAKSNDAQLAATLREARGISEEMIRRGEFNPA*
JGI25383J37093_101874742	3300002560	Grasslands Soil	HELFDEELDRLLRESANGGDEPAAAMLREARRISEEMIRKSEFDPA*
JGI25613J43889_100164143	3300002907	Grasslands Soil	LDRLLRESGKSNDAQLAATLREARGISEEMIRRXEFNPA*
Ga0066678_100507603	3300005181	Soil	IRDLFDEELERLLRETAKSSDPLIEATLREARRISEEMIRREEFNPA*
Ga0066671_101619121	3300005184	Soil	FDEELDRLLREAKSDDPQVAASLHEARRISEEMIRREEFDPR*
Ga0066388_1055426002	3300005332	Tropical Forest Soil	ELITRLFNEELDRLLTENSTKGVDDPKAAATLREARKVSEEMIRRSECNPA*
Ga0070699_1017208432	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	HELFDEELERLLRETANGSNEPAADMLREARRISEEMIRRSEFNPA*
Ga0070732_104925842	3300005542	Surface Soil	ELIHGIFDEELDRLLRENANADDPQVAATLRTARNMSEEMILRGEFNPV*
Ga0066661_100765523	3300005554	Soil	DEELERLLRETEKSSDARMQTTLREARRISEEMIRREEFNPA*
Ga0066661_102259231	3300005554	Soil	HTPELIHELFEEELGRLLRENAKNDDALAAATLREAREISEEMIRREEFNPA*
Ga0070763_108889572	3300005610	Soil	LLRENAKSNDEGVAATLREARRMSEEMIRRGEFDPA*
Ga0066903_1008411092	3300005764	Tropical Forest Soil	TPELITRLFEEELDRLLREMRGNDSQTAATLREARRLSEEMIRQEEFDPR*
Ga0075026_1008185741	3300006057	Watersheds	ELIRNLFDEELERLLLENAKSNDAGLAATLREARCLSEEMIRRGEFDPA*
Ga0075019_109014731	3300006086	Watersheds	EAGLPIRHTAELIHELFEEELDRLLRENAKNNDDQAATTLREARGISEEMIHRGEFNPA*
Ga0066653_100021097	3300006791	Soil	LRETEKSSDARMQTTLREARRISEEMIRREEFNPA*
Ga0066659_101176301	3300006797	Soil	NEELDRLLSETAKNSDPQMAATLREARGISEEMIRGQEFNPA*
Ga0066660_109353442	3300006800	Soil	LRDAKSDDPQVATSLHEARRISEEMIRREEFDPR*
Ga0099793_102217772	3300007258	Vadose Zone Soil	FDEELDRLLRESAKSNDAQVAATLREARGISEEMIRRGEFNPA*
Ga0099794_100111101	3300007265	Vadose Zone Soil	ELIRDLFEEELARLLRETAASTDPLAAATLREARAISEEMIRREEFNPA*
Ga0099794_107431971	3300007265	Vadose Zone Soil	LRESVNGGNEQAATTLREARMSSEEMIRRSEFNPA*
Ga0099829_100695063	3300009038	Vadose Zone Soil	DEELGRLLRETAKNSDPQMTTTLREARGISEEMIRRGEFNPA*
Ga0099829_101224451	3300009038	Vadose Zone Soil	RDLFDEELDRLLRETAKNSDPQVAATLREARGISEEMIRRGEFNPA*
Ga0099829_107944322	3300009038	Vadose Zone Soil	RLLRETAKDGDPQRTATLREARCISEEMIRRGEFDPV*
Ga0099830_111137992	3300009088	Vadose Zone Soil	RETAKTNDPQMSATLREARGISEEMIRREEFNPA*
Ga0099830_112599471	3300009088	Vadose Zone Soil	ELDRLLRETAKNSDPQVAATLRDARGISEEMIRRGEFNPA*
Ga0099827_107057542	3300009090	Vadose Zone Soil	FDEELDRLLRENAKSDDALANARLREAREISEEMIRRGEFNPA*
Ga0099792_103910192	3300009143	Vadose Zone Soil	IHELFDEQLNQLMREGANSGDAPAAATLREAREISEEMIRRAEFNPA*
Ga0126384_105845422	3300010046	Tropical Forest Soil	FDEELERLLREMKSDDAQMAATLREARRISEEMIRREEFDPR*
Ga0134082_100137131	3300010303	Grasslands Soil	LIRDLFDQELGRLLRENAKSNDPELATTLREARGISEEMIRRAEFNPA*
Ga0126370_114387841	3300010358	Tropical Forest Soil	EELDRLLREAKSDDPQVAIKLQEARRMSEEMIRREEFDPR*
Ga0126381_1039992912	3300010376	Tropical Forest Soil	LQESATKGTDDPKLAATLREARAVSEEMIRRGEFSPA*
Ga0150983_158641282	3300011120	Forest Soil	LLRESAKDSDPQVAATLREARSLSEEMIRRAEFNPA*
Ga0137392_109936441	3300011269	Vadose Zone Soil	ELGRLLQETGASNDPVATATLREARAISEEMIRREEFNPA*
Ga0137393_107272582	3300011271	Vadose Zone Soil	LDRLLRETAKTNDPQMSATLREARGISEEMIRREEFNPA*
Ga0137388_109080111	3300012189	Vadose Zone Soil	LIRDLFDEELDRLLRESAKSNDAQLAATLRVARGISEEMIRRGEFNPA*
Ga0137383_105077402	3300012199	Vadose Zone Soil	FDEELDRLLRETAKDGDPQRTATLREARRISEEMIRRGEFNPV*
Ga0137365_111648632	3300012201	Vadose Zone Soil	NLFDEELDRLLRETAKDGDPQRTSTLREARRISEEMIRLGEFNPV*
Ga0137363_112491491	3300012202	Vadose Zone Soil	LIRDLFDEELDRLLRESAKSNDAQVAATLREARGISEEMIRRGEFNPA*
Ga0137399_117264702	3300012203	Vadose Zone Soil	LFDEELDRLLRETGNNGNEQATATIREARRISEEMIRRSEFNPA*
Ga0137362_102221041	3300012205	Vadose Zone Soil	DEELDRLLRESANGGNEPAATTLREARRISEEMIRKSEFDPA*
Ga0137362_111734161	3300012205	Vadose Zone Soil	DLFEEELARLLRETAASTDPLAAATLREARAISEEMIRREEFNPA*
Ga0137381_107282901	3300012207	Vadose Zone Soil	RETAKDGDPQRTATLREARRISEEMIRRGEFNPV*
Ga0137379_107320031	3300012209	Vadose Zone Soil	LLRENAKSDDALANARLREAREISEEMIRRGEFNPA*
Ga0137378_111812331	3300012210	Vadose Zone Soil	ELDRLLRETAKDGDPQRTATLREARRISEEMIRRGEFNPV*
Ga0137387_106939412	3300012349	Vadose Zone Soil	RDLFNEELDRLLSETAKNSDSQMAATLREARGISEEIIRREEFNPA*
Ga0137386_112215071	3300012351	Vadose Zone Soil	ELDRLLREHAKSNDAELATTLREARGISGEMIRRAEFNPA*
Ga0137398_102222902	3300012683	Vadose Zone Soil	HTPELIHELFEEELGRLLRENANGNDAQVATLREARRMSEEMILQEEFNPA*
Ga0137397_106428332	3300012685	Vadose Zone Soil	LDRLMREGANSADAPAAATLRKAREISEEMIRRAEFNPT*
Ga0137397_112765072	3300012685	Vadose Zone Soil	DEELDRLLRESGKSNDAQLAATLREARGISEEMIRRGEFNPA*
Ga0137395_107149732	3300012917	Vadose Zone Soil	RDLFDEELDRLLRETAKTNDPQMSATLREARGISEEMIRREEFNPA*
Ga0137396_107136231	3300012918	Vadose Zone Soil	RLLRESAKSNDAQLAATLREARGISEEMIRRGEFNPA*
Ga0137404_108466132	3300012929	Vadose Zone Soil	TPEFIRDLFDEELERLLRETAENSDPRVAATLREARVTSEEMIRREEFNPA*
Ga0137407_122286081	3300012930	Vadose Zone Soil	HTPELIHELFDEQLGRLMREGGNTSDAQTAATLREAREISEEMIRRAEFNPA*
Ga0134075_100155354	3300014154	Grasslands Soil	EFIRDLFDEELERLLRETAKSSDPLIEATLREARRISEEMIRREEFNPA*
Ga0134078_101264772	3300014157	Grasslands Soil	LLRENAKSNDAELATTLREARGISEEMIRRAEFNPA*
Ga0134079_103873231	3300014166	Grasslands Soil	ELDRLLREAKIDDPKVAASLHEARRISQEMIRREEFDPR*
Ga0182018_104981452	3300014489	Palsa	LELEWLLYETANRNDPHVAATLREARTISETMIRRGEFNPS*
Ga0137411_11397393	3300015052	Vadose Zone Soil	GETAKNSDAQMEATLREARRISEEMIRREEFNPA*
Ga0137412_107462692	3300015242	Vadose Zone Soil	DLFDEELDRLLRESAKSNDAQLAATLREARGISEEMIRRGEFNPA*
Ga0137409_108866731	3300015245	Vadose Zone Soil	PIRHTSELIHELFEEELGRLLRESAKNDDALAAATLREAREISEEMIRREEFNPA*
Ga0182039_113864371	3300016422	Soil	PELISRLFDEELDRLLQETKSEDPQTGAMLREARGIGEEMIRREEFDPR
Ga0187771_112883301	3300018088	Tropical Peatland	RDLFDEELDRLLRETAKDNDPNIAATLREARGISEEMIRRGEFNPV
Ga0066669_100166104	3300018482	Grasslands Soil	PEFIRDLFDEELERLLRESEKSSDGQREATLREARRISEEMIRREEFNPA
Ga0137408_10880112	3300019789	Vadose Zone Soil	LIHELFEEELGRLLRENANGNDAQVATLREARRMSEEMILQEEFDPA
Ga0179592_100610182	3300020199	Vadose Zone Soil	LFEEELARLLRETDTSNDPVVVAALREARAISEEMIRREEFNPA
Ga0210407_106868321	3300020579	Soil	LLRETQKANDPLLPASLREARTISEEMIRRGEFDPV
Ga0210404_107780701	3300021088	Soil	LFDEELDRLLRESAKSNDAQLAATLREARGISEEMIRRGEFNPA
Ga0210406_108493501	3300021168	Soil	DRLLQENSAKGSDDPQSAATLREARAVSEEMIRRSECNPA
Ga0210406_110456471	3300021168	Soil	LIHQLFDEELDRLLRETQKANDPLLAASLREARTISEEMIRRGEFDPV
Ga0210400_101114091	3300021170	Soil	LIRELFDEELDRLLRETSASPELQAAATLREARGISEEMILRGEFNPA
Ga0210385_106836492	3300021402	Soil	DEELDLLLHENANSTDAQLAATLREARGMSEEMIRRGEFNPA
Ga0210409_114640592	3300021559	Soil	FDEQLNRLMREGTKGDDAPAAATLRRAREISEEMIRRAEFNPA
Ga0126371_115254721	3300021560	Tropical Forest Soil	RLFDEELDRLLREMKSDDPQTAATLREARRISEEMIRQEEFDPR
Ga0137417_12997611	3300024330	Vadose Zone Soil	DRLLSETAKNSDSGIAATLRKARGISEEMIRREEFNPA
Ga0137417_13419101	3300024330	Vadose Zone Soil	RSFDEELDRLLRESGRSNDAQLAATLREARGISEEMIRRGEFNPA
Ga0209350_11131371	3300026277	Grasslands Soil	FNEELDRLLSETPKNSDPQMAATLREARSVSEEMIRREEFNPA
Ga0209154_12915602	3300026317	Soil	DRLLRETAKNDDPNAAATLREARGISEEMIRREEFNPV
Ga0209687_10252683	3300026322	Soil	QLLRQTAKNDDPNAAATLREARGISEEMIRREEFNPV
Ga0209804_10915112	3300026335	Soil	DEELERLLRETEKSSDTRMQTTLREARRISEEMIRREEFNPA
Ga0209648_107926962	3300026551	Grasslands Soil	EELARLLRETAASTDPLAAATLREARAISEEMIRREEFNPA
Ga0209588_12021962	3300027671	Vadose Zone Soil	EELDLLLRETAKNGDPQIAATLREARGISEEMIRRGEFNPA
Ga0209588_12551501	3300027671	Vadose Zone Soil	SDKVEILGEAGLAITHTPELIHDLFEEELGRLLRESAAANDPQAAATLREARTISEEMIRREEFNPA
Ga0209180_1000125514	3300027846	Vadose Zone Soil	NLFDEELDRLLRETAKDGDPQRTATLREARCISEEMIRRGEFDPV
Ga0209180_100739883	3300027846	Vadose Zone Soil	DEELGRLLRETAKNSDPQMTTTLREARGISEEMIRRGEFNPA
Ga0209180_102768841	3300027846	Vadose Zone Soil	NLFDEELDRLLRETAKDGDPQRTATLREARCISEEMIRRGEFNPV
Ga0209701_101208132	3300027862	Vadose Zone Soil	DEELDRLLRETAKTNDPQMSATLREARGISEEMIRHGEFDPA
Ga0209380_103800282	3300027889	Soil	QLISDLFDEELDLLLRENAKSTDAQLAATLREARGMSEEMIRRAEFNPA
Ga0209067_109628801	3300027898	Watersheds	EAGLPIRHTAELIHELFEEELDRLLRENAKNNDDQAATTLREARGISEEMIHRGEFNPA
Ga0137415_104195851	3300028536	Vadose Zone Soil	TPEFIRDLFDEELEGLLCETEKSSDGRMEATLREARRISEEMIRREEFNPA
Ga0073994_100438542	3300030991	Soil	LDRLLRESAKSNDAQLAATLREARGISEEMIRRGEFNPA
Ga0307474_110753091	3300031718	Hardwood Forest Soil	DEELGRLLRENVKSDDALAAATLREAREISEEMIRQGEFNPA
Ga0307474_111512981	3300031718	Hardwood Forest Soil	DLFDEELDLLLRENANSTDAQVAATLREARSMSEEMIRRAEFNPA
Ga0307475_114410851	3300031754	Hardwood Forest Soil	IRDLFDEELDRLRRENANSDDAGLAATLREARVMSEEMIRRGEFNPA
Ga0307473_101216891	3300031820	Hardwood Forest Soil	QLLEEQKSDDPQTAATLREARRISEEMIRREEFDPR
Ga0307478_101922761	3300031823	Hardwood Forest Soil	LDLLLRENANSTDAQVAATLREARSMSEEMIRRAEFNPA
Ga0306923_102746281	3300031910	Soil	SRLFDEELDRLLQETKSEDPQTGAMLREARGIGEAMIRREEFDPR
Ga0310912_106635952	3300031941	Soil	RLLQEKESDDPQIAATLREARRISEKMIRREEFDPR
Ga0310912_114370471	3300031941	Soil	HTPELIGRLFDAQLDRMLQETKSDDPQIAAALREARRISEEMIRREEFDPR
Ga0307479_100258967	3300031962	Hardwood Forest Soil	RGLFDEELERLLGETAKNSDPQMGATLREARRMSEEMIRREEFNPA
Ga0307479_101109845	3300031962	Hardwood Forest Soil	ELICDLFEEELARLLRETATSNDPVAVATLREARAISEEMIRREEFNPA
Ga0318559_103305182	3300032039	Soil	MLQETKSDDPQIAAALREARRISEEMIRREEFDPR
Ga0318510_104240321	3300032064	Soil	RLFDEELDRLLQERKSDDPQIAVTLREARRISEEMIRREEFDPK
Ga0307470_109862241	3300032174	Hardwood Forest Soil	DQELDRLLGETVELTEAQQATLREARRLSEEMIRRGEFNPV
Ga0335077_119763161	3300033158	Soil	QQLFDEELDRLLREPAAAIPEATATLREARAISEEMIRREEFNPA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097067

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences