Metagenome Family F097001

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097001
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	83 residues
Representative Sequence	SFGTWVYETYGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALERAEEKVLEDARPLGDNVVALASRRR
Number of Associated Samples	71
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	30.77 %
% of genes near scaffold ends (potentially truncated)	55.77 %
% of genes from short scaffolds (< 2000 bps)	79.81 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.269 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil (24.038 % of family members)
Environment Ontology (ENVO)	Unclassified (27.885 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (36.538 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.48% β-sheet: 0.00% Coil/Unstructured: 43.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00589	Phage_integrase	5.83
PF13787	HXXEE	4.85
PF06253	MTTB	3.88
PF06736	TMEM175	2.91
PF00440	TetR_N	2.91
PF02082	Rrf2	2.91
PF07883	Cupin_2	2.91
PF03364	Polyketide_cyc	1.94
PF08281	Sigma70_r4_2	1.94
PF11578	DUF3237	1.94
PF06742	DUF1214	1.94
PF13602	ADH_zinc_N_2	1.94
PF04542	Sigma70_r2	1.94
PF12706	Lactamase_B_2	1.94
PF07676	PD40	1.94
PF00072	Response_reg	0.97
PF00196	GerE	0.97
PF13561	adh_short_C2	0.97
PF05016	ParE_toxin	0.97
PF00583	Acetyltransf_1	0.97
PF07228	SpoIIE	0.97
PF00892	EamA	0.97
PF01243	Putative_PNPOx	0.97
PF00392	GntR	0.97
PF06271	RDD	0.97
PF08031	BBE	0.97
PF04738	Lant_dehydr_N	0.97
PF00990	GGDEF	0.97
PF01066	CDP-OH_P_transf	0.97
PF01965	DJ-1_PfpI	0.97
PF14329	DUF4386	0.97
PF12762	DDE_Tnp_IS1595	0.97
PF08352	oligo_HPY	0.97
PF06197	DUF998	0.97
PF08240	ADH_N	0.97
PF12697	Abhydrolase_6	0.97
PF06863	DUF1254	0.97
PF07730	HisKA_3	0.97
PF01906	YbjQ_1	0.97
PF13419	HAD_2	0.97
PF04892	VanZ	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG5598	Trimethylamine:corrinoid methyltransferase	Coenzyme transport and metabolism [H]	3.88
COG0640	DNA-binding transcriptional regulator, ArsR family	Transcription [K]	2.91
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	2.91
COG1725	DNA-binding transcriptional regulator YhcF, GntR family	Transcription [K]	2.91
COG1959	DNA-binding transcriptional regulator, IscR family	Transcription [K]	2.91
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	2.91
COG2188	DNA-binding transcriptional regulator, GntR family	Transcription [K]	2.91
COG2378	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	Transcription [K]	2.91
COG2524	Predicted transcriptional regulator, contains C-terminal CBS domains	Transcription [K]	2.91
COG3548	Uncharacterized membrane protein	Function unknown [S]	2.91
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	2.91
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.94
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.94
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.94
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.94
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	1.94
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.97
COG0393	Uncharacterized pentameric protein YbjQ, UPF0145 family	Function unknown [S]	0.97
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	0.97
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	0.97
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.97
COG3371	Uncharacterized membrane protein	Function unknown [S]	0.97
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.97
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.97
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.97
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.97
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.27 %
Unclassified	root	N/A	6.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.27 %
Unclassified	root	N/A	6.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.27 %
Unclassified	root	N/A	6.73 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	65.38 %
Unclassified	root	N/A	6.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.85 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.96 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	62.50 %
Unclassified	root	N/A	6.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.88 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.96 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.96 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.96 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	52.88 %
Unclassified	root	N/A	6.73 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.96 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.96 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.96 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.96 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.96 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	40.38 %
Unclassified	root	N/A	6.73 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	2.88 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2.88 %
Actinobacteria bacterium ADurb.BinA094	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	0.96 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.96 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.96 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.96 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	40.38 %
Unclassified	root	N/A	6.73 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	2.88 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	2.88 %
Methylocaldum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	0.96 %
Deltaproteobacteria bacterium RIFOXYD12_FULL_55_16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFOXYD12_FULL_55_16	0.96 %
Actinobacteria bacterium ADurb.BinA094	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	0.96 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.96 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	40.38 %
Unclassified	root	N/A	6.73 %
Leifsonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Leifsonia	2.88 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	2.88 %
Methylocaldum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	0.96 %
Deltaproteobacteria bacterium RIFOXYD12_FULL_55_16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFOXYD12_FULL_55_16	0.96 %
Actinobacteria bacterium ADurb.BinA094	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	0.96 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.96 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	40.38 %
Unclassified	root	N/A	6.73 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	2.88 %
unclassified Leifsonia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Leifsonia → unclassified Leifsonia	0.96 %
Methylocaldum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	0.96 %
Deltaproteobacteria bacterium RIFOXYD12_FULL_55_16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFOXYD12_FULL_55_16	0.96 %
Actinobacteria bacterium ADurb.BinA094	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	0.96 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.96 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	40.38 %
Unclassified	root	N/A	6.73 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	2.88 %
Leifsonia sp. Leaf264	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Leifsonia → unclassified Leifsonia → Leifsonia sp. Leaf264	0.96 %
Methylocaldum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	0.96 %
Deltaproteobacteria bacterium RIFOXYD12_FULL_55_16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFOXYD12_FULL_55_16	0.96 %
Actinobacteria bacterium ADurb.BinA094	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	0.96 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.96 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_100115609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	613	Open in IMG/M
3300001213\|JGIcombinedJ13530_102532440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	903	Open in IMG/M
3300001870\|JGI24129J20441_1013367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2394	Open in IMG/M
3300002515\|JGI24144J35610_10024897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1681	Open in IMG/M
3300002549\|JGI24130J36418_10007111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3710	Open in IMG/M
3300002563\|JGI24138J36424_10054779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1073	Open in IMG/M
3300002569\|JGI24136J36422_10120742	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300004155\|Ga0066600_10075820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1258	Open in IMG/M
3300004242\|Ga0066601_10226026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	718	Open in IMG/M
3300004282\|Ga0066599_100650204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	716	Open in IMG/M
3300005144\|Ga0068711_1012281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2795	Open in IMG/M
3300006102\|Ga0075015_100500478	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300006795\|Ga0075520_1005144	All Organisms → cellular organisms → Bacteria	6614	Open in IMG/M
3300009029\|Ga0066793_10755584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300009087\|Ga0105107_10127968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1788	Open in IMG/M
3300009087\|Ga0105107_11072027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300009175\|Ga0073936_10009380	All Organisms → cellular organisms → Bacteria	12172	Open in IMG/M
3300009175\|Ga0073936_10011886	All Organisms → cellular organisms → Bacteria	10469	Open in IMG/M
3300009502\|Ga0114951_10094023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1716	Open in IMG/M
3300010342\|Ga0116252_10029143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4774	Open in IMG/M
3300011997\|Ga0120162_1084274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	689	Open in IMG/M
3300020163\|Ga0194039_1031592	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFOXYD12_FULL_55_16	2044	Open in IMG/M
3300020163\|Ga0194039_1060783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1387	Open in IMG/M
3300020163\|Ga0194039_1108722	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300020164\|Ga0194037_1057539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1454	Open in IMG/M
3300020228\|Ga0194040_1081775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	940	Open in IMG/M
3300021520\|Ga0194053_10088403	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300021520\|Ga0194053_10147997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	957	Open in IMG/M
3300021605\|Ga0194054_10017354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2787	Open in IMG/M
3300022555\|Ga0212088_10003989	All Organisms → cellular organisms → Bacteria	28708	Open in IMG/M
3300022555\|Ga0212088_10118627	All Organisms → cellular organisms → Bacteria	2349	Open in IMG/M
3300025316\|Ga0209697_10050065	All Organisms → cellular organisms → Bacteria	3224	Open in IMG/M
3300025461\|Ga0208851_1010770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Leifsonia	1926	Open in IMG/M
3300025461\|Ga0208851_1010770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Leifsonia	1926	Open in IMG/M
3300025479\|Ga0208588_1033655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1066	Open in IMG/M
3300025499\|Ga0207931_1052922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	809	Open in IMG/M
3300025533\|Ga0208584_1019517	All Organisms → cellular organisms → Bacteria	1833	Open in IMG/M
3300025548\|Ga0208716_1096167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300025575\|Ga0209430_1037898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1485	Open in IMG/M
3300025650\|Ga0209385_1004755	All Organisms → cellular organisms → Bacteria	5797	Open in IMG/M
3300025650\|Ga0209385_1056510	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300025692\|Ga0209744_1030491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2072	Open in IMG/M
3300025720\|Ga0208197_1076728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Leifsonia → unclassified Leifsonia → Leifsonia sp. Leaf264	1260	Open in IMG/M
3300025725\|Ga0209638_1051283	All Organisms → cellular organisms → Bacteria	1686	Open in IMG/M
3300025725\|Ga0209638_1075774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1264	Open in IMG/M
3300025739\|Ga0209745_1100292	Not Available	968	Open in IMG/M
3300025846\|Ga0209538_1267601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	612	Open in IMG/M
3300025865\|Ga0209226_10037118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2200	Open in IMG/M
3300025865\|Ga0209226_10087408	All Organisms → cellular organisms → Bacteria	1422	Open in IMG/M
3300025888\|Ga0209540_10623660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300025891\|Ga0209585_10108038	Not Available	1057	Open in IMG/M
3300025891\|Ga0209585_10412380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300027051\|Ga0209269_1016047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1818	Open in IMG/M
3300027818\|Ga0209706_10117115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1321	Open in IMG/M
3300027841\|Ga0209262_10117551	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1259	Open in IMG/M
3300027902\|Ga0209048_10061477	All Organisms → cellular organisms → Bacteria	3017	Open in IMG/M
3300027902\|Ga0209048_10133941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1866	Open in IMG/M
3300027902\|Ga0209048_10248702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1268	Open in IMG/M
3300028741\|Ga0302256_10141084	Not Available	649	Open in IMG/M
3300028868\|Ga0302163_10033288	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300029288\|Ga0265297_10118182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	2073	Open in IMG/M
3300029984\|Ga0311332_10294843	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300029987\|Ga0311334_10431139	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300029989\|Ga0311365_11553898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300030002\|Ga0311350_11588221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	580	Open in IMG/M
3300030294\|Ga0311349_10331217	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300030294\|Ga0311349_10335016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1429	Open in IMG/M
3300030294\|Ga0311349_10692574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	962	Open in IMG/M
3300030943\|Ga0311366_11593987	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	559	Open in IMG/M
3300031232\|Ga0302323_102946288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	543	Open in IMG/M
3300031521\|Ga0311364_11007898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	831	Open in IMG/M
3300031726\|Ga0302321_103076030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	544	Open in IMG/M
3300031834\|Ga0315290_10102933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2410	Open in IMG/M
3300031873\|Ga0315297_10865679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	752	Open in IMG/M
3300031918\|Ga0311367_10964936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	855	Open in IMG/M
3300031997\|Ga0315278_10172044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	2221	Open in IMG/M
3300031997\|Ga0315278_10874707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	903	Open in IMG/M
3300031997\|Ga0315278_11123266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	776	Open in IMG/M
3300031997\|Ga0315278_11145317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	766	Open in IMG/M
3300031997\|Ga0315278_11474341	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300032164\|Ga0315283_10718869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1075	Open in IMG/M
3300032164\|Ga0315283_11096772	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300032173\|Ga0315268_10235997	All Organisms → cellular organisms → Bacteria	1758	Open in IMG/M
3300032173\|Ga0315268_10489782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1212	Open in IMG/M
3300032177\|Ga0315276_10748710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1047	Open in IMG/M
3300032177\|Ga0315276_11157342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	817	Open in IMG/M
3300032177\|Ga0315276_11367649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300032177\|Ga0315276_12493793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300032256\|Ga0315271_11140076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	674	Open in IMG/M
3300032397\|Ga0315287_10123565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2967	Open in IMG/M
3300032397\|Ga0315287_10169699	All Organisms → cellular organisms → Bacteria	2532	Open in IMG/M
3300032397\|Ga0315287_10771257	Not Available	1132	Open in IMG/M
3300032397\|Ga0315287_11993151	Not Available	640	Open in IMG/M
3300032397\|Ga0315287_12629494	Not Available	537	Open in IMG/M
3300032516\|Ga0315273_10407550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1832	Open in IMG/M
3300032516\|Ga0315273_10696071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1336	Open in IMG/M
3300032829\|Ga0335070_11681211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300032893\|Ga0335069_11226610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	820	Open in IMG/M
3300032897\|Ga0335071_10468618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1212	Open in IMG/M
3300032897\|Ga0335071_10494778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	1175	Open in IMG/M
3300032897\|Ga0335071_10967220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	798	Open in IMG/M
3300032897\|Ga0335071_11135561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	727	Open in IMG/M
3300033004\|Ga0335084_12116534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300034195\|Ga0370501_0072137	Not Available	1131	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.19%
Engineered	Engineered	4.81%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	48.08%
Terrestrial	Environmental → Terrestrial	47.12%
Wastewater	Engineered → Wastewater	1.92%
Lab Enrichment	Engineered → Lab Enrichment	1.92%
Solid Waste	Engineered → Solid Waste	0.96%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	45.19%
Soil	Environmental → Terrestrial → Soil	33.65%
Peat	Environmental → Terrestrial → Peat	13.46%
Marine	Environmental → Aquatic → Marine	1.92%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	1.92%
Defined Media	Engineered → Lab Enrichment → Defined Media	1.92%
Sediment	Environmental → Aquatic → Sediment	0.96%
Landfill	Engineered → Solid Waste → Landfill	0.96%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	35.58%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	13.46%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.65%
Pond	Environmental → Aquatic → Freshwater → Pond	3.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.88%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.88%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.92%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	1.92%
Anaerobic Media	Engineered → Lab Enrichment → Defined Media → Anaerobic Media	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	25.00%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	22.12%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	13.46%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	13.46%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.69%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	3.85%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.88%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.88%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.92%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	1.92%
Unclassified	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.96%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	24.04%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	22.12%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	13.46%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	7.69%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.73%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	4.81%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	3.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.88%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.88%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.92%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	1.92%
Enrichment Culture	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Enrichment Culture	1.92%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.96%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.96%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.96%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.96%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001870	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211	Environmental	Open in IMG/M
3300002515	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A	Environmental	Open in IMG/M
3300002549	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212	Environmental	Open in IMG/M
3300002563	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-312	Environmental	Open in IMG/M
3300002569	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212	Environmental	Open in IMG/M
3300004155	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11	Environmental	Open in IMG/M
3300004242	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Medium cellulose week 11	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300005144	Enrichment culture microbial communities from Arthur Kill intertidal strait, New Jersey, USA, that are MTBE-degrading - MTBE-AKM (Arthur Kill Methanogenic) MetaG	Engineered	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300010342	AD_JPNAca1	Engineered	Open in IMG/M
3300011997	Permafrost microbial communities from Nunavut, Canada - A15_80cm_18M	Environmental	Open in IMG/M
3300020163	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L227-8m	Environmental	Open in IMG/M
3300020164	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L304-6m	Environmental	Open in IMG/M
3300020228	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L227-10m	Environmental	Open in IMG/M
3300021520	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L227-8m	Environmental	Open in IMG/M
3300021605	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L227-10m	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300025316	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG (SPAdes)	Environmental	Open in IMG/M
3300025461	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025479	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025499	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025533	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025548	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025575	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 11-33A (SPAdes)	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300025692	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-311 (SPAdes)	Environmental	Open in IMG/M
3300025720	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA4_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300025739	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-312 (SPAdes)	Environmental	Open in IMG/M
3300025846	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-211 (SPAdes)	Environmental	Open in IMG/M
3300025865	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212 (SPAdes)	Environmental	Open in IMG/M
3300025888	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)	Environmental	Open in IMG/M
3300025891	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)	Environmental	Open in IMG/M
3300027051	Enrichment culture microbial communities from Arthur Kill intertidal strait, New Jersey, USA, that are MTBE-degrading - MTBE-AKM (Arthur Kill Methanogenic) MetaG (SPAdes)	Engineered	Open in IMG/M
3300027818	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027841	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300028741	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_4	Environmental	Open in IMG/M
3300028868	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_3	Environmental	Open in IMG/M
3300029288	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 137-91	Engineered	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1001156091	3300001213	Wetland	TWVYETYGVKQAQEWLGHSDPATTLRHYVRLTAAARAKAAAGLDEVTRAAIEAAQEQRTRETPRTPSNVIALAGRRRQAR*
JGIcombinedJ13530_1025324402	3300001213	Wetland	AQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALEAAEEKAAEDSQPLLDNVVSLVSRRR*
JGI24129J20441_10133671	3300001870	Arctic Peat Soil	GAGYRVEDWTWVYETYGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALEGAERRAVEDAGPAFDNVVELASRRL*
JGI24144J35610_100248971	3300002515	Arctic Peat Soil	EWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALEGAERRAVEDAGPAFDNVVELASRRL*
JGI24130J36418_100071111	3300002549	Arctic Peat Soil	RPREPGYRVEDWTWVYETYGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALEGAERRAVEDAGPAFDNVVELASRRL*
JGI24138J36424_100547791	3300002563	Arctic Peat Soil	VKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALEIAERRAAADAEPALDNVVSLASRRR*
JGI24136J36422_101207422	3300002569	Arctic Peat Soil	THLGLRGERVKQAQEWLGHSDPATTLRHYVRLTTTARAKAVAGLDEVTRAALERAEETVLEDARPPRDNVVALASRRR*
Ga0066600_100758203	3300004155	Freshwater	PRNGRRGHLRHGRCETYGVKQAQEWLGHSAPATTLMHYMRLTTSARSMAVAGLDEATRAALEAAEWQALEDAQPVRDNVVALASRRR*
Ga0066601_102260262	3300004242	Freshwater	VKQAQEWLGHSAPATTLMHYMRLTTSARSMAVAGLDEATRAALEAAEWQALEDAQPVRDNVVALASRRR*
Ga0066599_1006502042	3300004282	Freshwater	VKQAQEWLGHSAPATTLMHYMRLTTSARSMAVAGLDEATRAALEAAEWQALEDAQPVRDN
Ga0068711_10122812	3300005144	Enrichment Culture	MHGLRDSFGTCVYETYGVKQAQEWLGHGDPATTLRHYVRLTTAAGAEAVAGLDEVTRAALEAVQAHAGKDRTPVLDNVVELASRRR*
Ga0075015_1005004782	3300006102	Watersheds	HLPIHGLRDSFGTWAYETYGVKQAQEWLGRSDPATTLRHYVRLTTAARAKAEAGLDEVTRAALEAAEENAAEAAQPLRDNVVSLAGRRR*
Ga0075520_10051449	3300006795	Arctic Peat Soil	LLPRGGEREVRACLRDSFGTWVSEECGVKQAQEWLGHFDPAATLRHYVRLTTTARAKAVAGLEEVTRAAIEGAEEKILEDAKPLLDNVVVLASRR*
Ga0066793_107555841	3300009029	Prmafrost Soil	VKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALERAEEKMLQDARPSRDNVVELASRRL*
Ga0105107_101279683	3300009087	Freshwater Sediment	RGPQRGRQPDGAFDLEEPVVELGGPPEDRPAPADPRPARLLRHLGLRDYGVKQAQEWLGHSADPATTLRHHVRLTTAARAKAVAGLDEVTRAALDGAERRAVQDAEPALDNVVALASRRR
Ga0105107_110720271	3300009087	Freshwater Sediment	VYETYGVKQAQEWLGHGDPATTLRHYVRLTTAARAKAVAGLDEVTRAALERAEEQVLEEAQPPRDNVVALASHRR*
Ga0073936_100093808	3300009175	Freshwater Lake Hypolimnion	VEVELSRPAEDRPHRPIYGLRDSFGTWVYEECGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALERAEEKVREDARPPRDNVVALASRCT*
Ga0073936_100118867	3300009175	Freshwater Lake Hypolimnion	VPPDARGDSFGTRVYETYGVKQAQEWLEHSDPATTRRHYVRLTTAARANAVAGLDEVTMAALQWAEKKAAEDARPARDNVVARVRRRHSR*
Ga0114951_100940232	3300009502	Freshwater	VPPDARGDSFGTWVYETYGVKQAQEWLEHSDPATTRRHYVRLTTAARANAVAGLDEVTMAALQWAEKKAAEDARPARDNVVALVRRRHSR*
Ga0116252_100291433	3300010342	Anaerobic Digestor Sludge	VARQKVEPHLPMHGLRDSFGTRVYETYGIKQVQEWLGHGDAATTLRHCVRLTTAARAKAVAGLDQVTRAAIEAALVQSAEEETVASNVIEFAAHRR*
Ga0120162_10842742	3300011997	Permafrost	VYETYGVKQAQEWLGHGDPATTLRHYVRLTTAARAKVMAGLDEVTRAALERAVEKVLEDARPLGDNVVALASRR*
Ga0194039_10315922	3300020163	Anoxic Zone Freshwater	FGTWVYETYGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDQVTRAALESAEEKILEDAQPLEDNVVSLASRRR
Ga0194039_10607832	3300020163	Anoxic Zone Freshwater	VEVELGRPAEDRPHRPIYGLRDSFGTWVYEECGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALERAEEKVREDARPPRDNVVALASRCT
Ga0194039_11087222	3300020163	Anoxic Zone Freshwater	VLPDARGDSFGTWVYEAYGVKQAQEWLGHSDPATTLRHYVRLPTAARANAVAGLDEVTMAALQWAEKKAAEDARPARDNVVALVRRRHSR
Ga0194037_10575391	3300020164	Anoxic Zone Freshwater	SRRRRRTTQMLPDARGDSFGTWVYEAYGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTMAALQWAEKKAAEDARPARDNVVALVRRRHSR
Ga0194040_10817752	3300020228	Anoxic Zone Freshwater	VLPDARGDSFGTWVYEAYGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTMAALQWAEKKAAEDARPARDNVVALVRRRHSR
Ga0194053_100884032	3300021520	Anoxic Zone Freshwater	VLPDARGDSFGTWVYEAYGVKQAQEWLGHSDPATTLRHYVRLTTAARANAVAGLDEVTMAALQWAEKKAAEDARPARDNVVALVRRRHSR
Ga0194053_101479971	3300021520	Anoxic Zone Freshwater	QAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDQVTRAALESAEEKILEDAQPLEDNVVSLASRRR
Ga0194054_100173541	3300021605	Anoxic Zone Freshwater	LHDSFGTWVYETNGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVARLDEVTRAALEQAETKAAEDALPAPDNVVALAGRRR
Ga0212088_1000398929	3300022555	Freshwater Lake Hypolimnion	VEVELSRPAEDRPHRPIYGLRDSFGTWVYEECGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALERAEEKVREDARPPRDNVVALASRCT
Ga0212088_101186273	3300022555	Freshwater Lake Hypolimnion	AYGVKQAQEWLGHSDPATTRRHYVRLTTAARANAVAGLDEVTMAALQWAEKKAAEDARPARDNVVARVRRRHSR
Ga0209697_100500652	3300025316	Freshwater Lake Hypolimnion	VPPDARGDSFGTRVYETYGVKQAQEWLGHSDPATTRRHYVRLTTAARANAVAGLDEVTMAALQWAEKKAAEDARPARDNVVARVRRRHSR
Ga0208851_10107701	3300025461	Arctic Peat Soil	FGTWVYEEYGVKQAQEWLGYSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALEAAEERILEDARPLRDNVVALASRRR
Ga0208851_10107703	3300025461	Arctic Peat Soil	MFYETYGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALEAAEEKAAEDAQPARDNVVALASRRR
Ga0208588_10336552	3300025479	Arctic Peat Soil	VVELGRPPEDRPHLPIHGLRDSFGTWVYETYGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALERAEEKVLENAQPLEDNVVALASRRR
Ga0207931_10529221	3300025499	Arctic Peat Soil	VKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALEAAERRAIEDAEPVPSNVVALAGRRGRTR
Ga0208584_10195172	3300025533	Arctic Peat Soil	VWRTANPRTDRESSLHGLRDWFGTWVYETYGVKQAQEWLGHGDPATALRHYVRLTTAARAKAMAGLDEVTRAALERAEEKVREEARPLRDNVVALARRR
Ga0208716_10961671	3300025548	Arctic Peat Soil	VVELGRPPEDRPHLPIHGLRDSFGTWVYETYGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALEAAEEKAAEDAQPARDNVVALASRRR
Ga0209430_10378982	3300025575	Arctic Peat Soil	VKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALEIAERRAAADAEPALDNVVSLASRRR
Ga0209385_10047551	3300025650	Arctic Peat Soil	EEYGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALEAAQARNAEDQAPASNVVELASRRS
Ga0209385_10565102	3300025650	Arctic Peat Soil	LLPRGGEREVRACLRDSFGTWVSEECGVKQAQEWLGHFDPAATLRHYVRLTTTARAKAVAGLEEVTRAAIEGAEEKILEDAKPLLDNVVVLASRR
Ga0209744_10304912	3300025692	Arctic Peat Soil	VELGRAPEDRPHLPIHGLRDSFGTWVYETYGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALEIAERRAAADAEPALDNVVSLASRRR
Ga0208197_10767281	3300025720	Anaerobic Digestor Sludge	VARQKVEPHLPMHGLRDSFGTRVYETYGIKQVQEWLGHGDAATTLRHCVRLTTAARAKAVAGLDQVTRAAIEAALVQSAEEETVASNVIEFAAHRR
Ga0209638_10512834	3300025725	Arctic Peat Soil	RPREPGYRVEDWTWVYETYGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALEGAERRAVEDAGPAFDNVVELASRRL
Ga0209638_10757741	3300025725	Arctic Peat Soil	VKQAQEWLGHGDPATTLRHYVRLTTAARAKAVAGLDEITRAALECAEEKVLEDARPPCDNVVALASRR
Ga0209745_11002921	3300025739	Arctic Peat Soil	EEYGVKQAQKWFGHGDPATTLRHYVRLTTAARAKAVAGLDEVTRAALEAAEERAVQDAAPVRDNVVTLATRRRAR
Ga0209538_12676011	3300025846	Arctic Peat Soil	SFGTWVYETYGVKQAQEWLGHSDSATTLRHYVRLTTAARAKAVAGLDEVTRAALERAEERAAKDATPVLDNVVSLASRRR
Ga0209226_100371181	3300025865	Arctic Peat Soil	GVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAGLERAKEKILEDSRPRLDNVVVLASRRR
Ga0209226_100874082	3300025865	Arctic Peat Soil	VYETYGVKQAQEWLGHGDPATALRHCVRLTTAARAKAMAGLDEVTRVTRAALERAEEKVREHARPLRDNVVALARRRR
Ga0209540_106236602	3300025888	Arctic Peat Soil	KQAQEWLSHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALERAEEKVLEDARPTRGNVVSLAGRRR
Ga0209585_101080383	3300025891	Arctic Peat Soil	GTWVYETYGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALEIAERRAAADAEPALDNVVSLASRRR
Ga0209585_104123801	3300025891	Arctic Peat Soil	VKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALEAAEWRAIEDAEPVPSNVVALAGRRGRTR
Ga0209269_10160472	3300027051	Enrichment Culture	MHGLRDSFGTCVYETYGVKQAQEWLGHGDPATTLRHYVRLTTAAGAEAVAGLDEVTRAALEAVQAHAGKDRTPVLDNVVELASRRR
Ga0209706_101171152	3300027818	Freshwater Sediment	VVELGGPPEDRPAPADPRPARLLRHLGLRDYGVKQAQEWLGHSADPATTLRHHVRLTTAARAKAVAGLDEVTRAALDGAERRAVQDAEPALDNVVALASRRR
Ga0209262_101175511	3300027841	Freshwater	AQEWLGHSAPATTLMHYMRLTTSARSMAVAGLDEATRAALEAAEWQALEDAQPVRDNVVALASRRR
Ga0209048_100614771	3300027902	Freshwater Lake Sediment	IDPHLPIHGLRDSFGTWVYEEYGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALEAAEEKILEDAGPLRDNVVSLASRR
Ga0209048_101339411	3300027902	Freshwater Lake Sediment	KIDPHLPMHGLRDSFGTWVYETYGVTQAQEWLGHGDPATTLRHYVRLTTAARAKAIAGLDEVTRAALAQAEKSALEDAQPVLDNVVALASRRR
Ga0209048_102487023	3300027902	Freshwater Lake Sediment	GLRDSFGTWVYEEYGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALEAAEEKVLEDARPARDNVVSLASRR
Ga0302256_101410841	3300028741	Fen	EEYGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALEAAEGKILEDAEFLFDNVVAFASRRQ
Ga0302163_100332883	3300028868	Fen	SFGTWVYETYGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALERAEEKVLEDARPLGDNVVALASRRR
Ga0265297_101181821	3300029288	Landfill Leachate	VYETYGVKQAQEWPGHSDPATTLRYYVRLTTVARAKAVAGLDEVTRAALERAEEMVLEDVRPRSDNVVALTSRRR
Ga0311332_102948431	3300029984	Fen	SFGTWVYETYGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRTALERAEEKVLEDARPLGDNVVALASRRR
Ga0311334_104311392	3300029987	Fen	RDSFGTWVYETYGVKQAQEWLGHFDPATTLRHYVRLTTAARAKAVAGLDEVTRAALDRAEEKAAEDQAPASNVIELASRRR
Ga0311365_115538982	3300029989	Fen	CHSARRHASAGGAAVAGAGGRERDAGRVAHQNIGPHLPIHGLRDCFGTLVNEECVVTQAQDWLGHSDPATTVRHYVRLTTAARAKAVAGLGEVTRAALGRAEEKVLEDAQPLEDNVVAIANRRR
Ga0311350_115882211	3300030002	Fen	YGLRDSFGTWVYETYGVKQAQEWLGHFDPATTLRHYVRLTTAARAKAVAGLDEVTRAALDRAEEKAAEDQAPASNVIELASRRR
Ga0311349_103312173	3300030294	Fen	ERDAGRVAHQNIGPHLPIHGLRDCFGTLVNEECVVKQAQDWLGHSDPATTVRHYVRLTTAARAKAVAGLDEVTRAALEAAEDKILEDAQPLEDNVVALASRRR
Ga0311349_103350162	3300030294	Fen	TWVYEEHGVKQAQAWLGHSDPATTLRHYARLTTTARAKAVAGLDEVTRAALERAEEKVAEDAQPVLNSVVALASRCG
Ga0311349_106925741	3300030294	Fen	AQEWLGHSDPATTLRRYVRLTTAARAKAVAGLDEVTRAALDAAVAQTRREATERSNVIELAGRRQAR
Ga0311366_115939873	3300030943	Fen	EWLGHSDPATTLRHYVRLTTTARAMAVAGLDEVTRAALERAEEKVREDAQPALDNVVALASRRR
Ga0302323_1029462882	3300031232	Fen	VYETYGVKRAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALERAEEKVLEDAQPLDDNVVALASR
Ga0311364_110078981	3300031521	Fen	FGTWVYEEYGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALEAAEDKILEDAQPLEDNVVALASRRR
Ga0302321_1030760302	3300031726	Fen	VYETYGVKRAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALERAEEKVLEDAQPLDDNVVALASRAGRLPV
Ga0315290_101029332	3300031834	Sediment	VYVTHGVRQAQEWLGHSDPATTLRHYVHLTTSAGAKDVAELGEVTRAALERAEKKAAEDAQPHRGNVVSMPSWRR
Ga0315297_108656793	3300031873	Sediment	WAYEAYGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALGAAEENAAEDAQPVRDNVVALASRRR
Ga0311367_109649362	3300031918	Fen	MKQAQEWLCHSDQATTLRHYVRLATAARAKAVAGLDEVTRAALERAEEQILEDAEPALGNIILLASRRR
Ga0315278_101720441	3300031997	Sediment	VYVTHGVRQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALDRAEVQVLEDARPPRGNVISLASRRR
Ga0315278_108747071	3300031997	Sediment	VELGGAAEDRPHLPIHGLRDSFGAWVYETYGVKQAQEWLGYGHPATTLRHYVRLTTAARAKAVAGLDEVTRAVLEAAEEKVLVDAQPPPDNVVSIAGRRR
Ga0315278_111232662	3300031997	Sediment	LRDSFGTWVYEEYGVKQVQEWLGHSDPATTLRHYVRLTNAAGAKAFAGLDEVMRAALEPPQAQLSQAVSASGNVIAPATRRRAR
Ga0315278_111453172	3300031997	Sediment	VKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDDVTRAVLERAEEKVLEDAQPARDNVVALSSWRR
Ga0315278_114743411	3300031997	Sediment	RTWAYEAYGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDDVTRAALESAEEKVLEDARPPRDNVVALASRR
Ga0315283_107188692	3300032164	Sediment	LRDSFGTWVYEEYGVKQVQEWLGHSDPATTLRHYVRLTTAAGAKAFAGLDEVMRAALEPPQAQLSQAVSASGNVIAPATRRRAR
Ga0315283_110967721	3300032164	Sediment	QEWPGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALEAAQAQCMEDETPPNNVVELAGRRR
Ga0315268_102359971	3300032173	Sediment	VKQSQEWLGHSDPATTLRHYVRLTTASRAKAVPGLDEVTRAALEAAERKAAEDAQPARDNVVVLSGRR
Ga0315268_104897823	3300032173	Sediment	LRDSFGTWVYETYGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALEAAEHKAAEDAQPPRDNVVALASRRR
Ga0315276_107487102	3300032177	Sediment	REWLGHSDPATTLRHYVHLTTSAGAKDVAELGEVTRAALERAEKKAAEDAQPHRGNVVSMPSWRR
Ga0315276_111573422	3300032177	Sediment	LRDSFGTWVYEEYGVKQVQEWLGHSDPATTLRHYVRLTNAAGAKAFAGLDEVMRAALEPPQAQLSQAASASGNVIAPATRRRAR
Ga0315276_113676491	3300032177	Sediment	VARQKTDPYLPIRGLRDSVGTWVYETYGVKQAQEWLGHSDPATTLRHYVRLTAAARAKAVAGLDEVTRAAIERAEEKALEDARPRRANVVALASRR
Ga0315276_124937932	3300032177	Sediment	QKIDPHLPIHGLRDSFGTWVYETYGVKQAQEWLGHSDPATTLRHYVRLTTASRAKAVAGLDEVTRAALDGAERRAAQDAEPALDNVVSLAGRRR
Ga0315271_111400761	3300032256	Sediment	RDSFGTWVYETYGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALEGAERRAIEDAEPLEDNVVSLASRRR
Ga0315287_101235656	3300032397	Sediment	PIHGLRDSFGTCVYETYGVKQAQEWLGHSDAATTLRHYVRLTTAARAKAVAGLDEVTRAALEGAERRAVVDAQPALDNVVSLASRRS
Ga0315287_101696994	3300032397	Sediment	WVYEEYGVKQVQEWLGHSDPATTLRHYVRLTTAAGAKAFAGLDEVMRAALEPPQAQLSQAVSASGNVIAPATRRRAR
Ga0315287_107712571	3300032397	Sediment	MRRLPRAPSGPSRLLHYETYGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALEHAEEKILEDARPARDNVVVLASRRL
Ga0315287_119931512	3300032397	Sediment	QEWLGHSDPATTLRRYVRLTAAERAKAVAGLDEVTRAALERAEERALEDAQPASPNVIQLASRRR
Ga0315287_126294941	3300032397	Sediment	KQAQERLGHSDPATTLRHHVHLTTAAGAKDVAELGEVTPAALERAEEKVLEDTWLALNNVVSIAVGRHPTPWARLP
Ga0315273_104075502	3300032516	Sediment	MRRLPRAPSGPSRLLHYETYGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALEAAEERAVQDAAPVLDNVVELAGSRR
Ga0315273_106960712	3300032516	Sediment	GLRDSFGTWVYETYGVKQAQEWLGHGDPATTLRHYVRLTTAARAKAVAGLDDVTRAALDRAEEKVLEDARPPRDNVVALASRR
Ga0335070_116812112	3300032829	Soil	MPHSARCGSRQPAQRVKNPPGLRDSFGTWVYESYGVKQAQEWLGHGDPATTLRHYVRLMTAARAKAVAGLDEVTRAALEQAEVQAAEDAHQFEDNVVALASRRR
Ga0335069_112266102	3300032893	Soil	TWLARQKVKPHLPMHGLRDSFGTWVYESYGVKQAQEWLGHGDPAATLRHYVRLTTAARAKAVAGLDEVTRAALEAAQTEQAPPLADNVVALAGRRRQTS
Ga0335071_104686182	3300032897	Soil	MHGLRDSLGTWAYETYGVKQAQEWLGHGDPATTLRHCVRLTTAARAKAVAGLDEVTRAALEAAQVQSLDKERAFGNVVELVSRRRG
Ga0335071_104947782	3300032897	Soil	MAATLGETYGVNQAREWLGHGDPATTLRHYVRLTTAARAKAVAGLDDVTRAALEAAQAHSDEEKSPVLDNVVELAGRRRTH
Ga0335071_109672201	3300032897	Soil	VKQALEWLGHGDPATTLRHYVRLTTTARAKAVAGLDEATRAAIDAAQAQRSQDETPTSNVVELATRRQQIR
Ga0335071_111355612	3300032897	Soil	VKNPHGLRDSFGTWVYESYGVKQAQEWLGHGDPATTLRHYVRLMTAARAKAVAGLDEVTRAALEQAEVQAAEDAHQFEDNVVALASRRR
Ga0335084_121165341	3300033004	Soil	LSGILGPQSSGVRESGSIPTPRQKVQPHLPMHGLRDSLGTWAYETYGVKQAQEWLGHGDPATTLRHCVRLTTAARAKAVAGLDEVTRAALEAAQVQSLDKERAFGNVVELVSRRRG
Ga0370501_0072137_882_1130	3300034195	Untreated Peat Soil	DSFGTWVYETYGVKQAQEWLGHSDPATTLRHYVRLTTAARAKAVAGLDEVTRAALEAAERREIEDAEPVADNVVALTDRRTG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F097001

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences