Metagenome Family F096983

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096983
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	95 residues
Representative Sequence	VRPITLYDSDRLRVRLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDLHATWPIIAARVTGPVLLAAGLFVRPLALLMLVLTL
Number of Associated Samples	84
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	93.07 %
% of genes near scaffold ends (potentially truncated)	94.23 %
% of genes from short scaffolds (< 2000 bps)	92.31 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (57.692 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (51.923 % of family members)
Environment Ontology (ENVO)	Unclassified (70.192 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (52.885 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 80.00% β-sheet: 0.00% Coil/Unstructured: 20.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF06742	DUF1214	7.69
PF13673	Acetyltransf_10	1.92
PF02735	Ku	1.92
PF03729	DUF308	0.96
PF00496	SBP_bac_5	0.96
PF00665	rve	0.96
PF01292	Ni_hydr_CYTB	0.96
PF06736	TMEM175	0.96
PF14023	DUF4239	0.96
PF00175	NAD_binding_1	0.96
PF12681	Glyoxalase_2	0.96
PF03358	FMN_red	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	7.69
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	7.69
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	1.92
COG1969	Ni,Fe-hydrogenase I cytochrome b subunit	Energy production and conversion [C]	0.96
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.96
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.96
COG2864	Cytochrome b subunit of formate dehydrogenase	Energy production and conversion [C]	0.96
COG3038	Cytochrome b561	Energy production and conversion [C]	0.96
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.96
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.96
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.96
COG3658	Cytochrome b subunit of Ni2+-dependent hydrogenase	Energy production and conversion [C]	0.96
COG4117	Thiosulfate reductase cytochrome b subunit	Inorganic ion transport and metabolism [P]	0.96
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
All Organisms	root	All Organisms	42.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
cellular organisms	root	All Organisms → cellular organisms	42.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	29.81 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	22.12 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.96 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15.38 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.88 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.96 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.96 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.88 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.92 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.96 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.96 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.96 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	4.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.88 %
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	1.92 %
Siccirubricoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Siccirubricoccus	0.96 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.96 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Nitrobacter hamburgensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis	4.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.88 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1.92 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.96 %
Siccirubricoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Siccirubricoccus	0.96 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.96 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.96 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Nitrobacter hamburgensis X14	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis → Nitrobacter hamburgensis X14	4.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.88 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1.92 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.96 %
Siccirubricoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Siccirubricoccus	0.96 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.96 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.96 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005439\|Ga0070711_100273439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1334	Open in IMG/M
3300005471\|Ga0070698_100416583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1277	Open in IMG/M
3300005536\|Ga0070697_100988718	Not Available	748	Open in IMG/M
3300006028\|Ga0070717_10086055	All Organisms → cellular organisms → Bacteria → Proteobacteria	2645	Open in IMG/M
3300006796\|Ga0066665_10369767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1175	Open in IMG/M
3300009090\|Ga0099827_10995006	Not Available	727	Open in IMG/M
3300009137\|Ga0066709_101625373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	923	Open in IMG/M
3300009162\|Ga0075423_12917049	Not Available	524	Open in IMG/M
3300010360\|Ga0126372_12872226	Not Available	534	Open in IMG/M
3300010360\|Ga0126372_13024074	Not Available	522	Open in IMG/M
3300010376\|Ga0126381_103371206	Not Available	629	Open in IMG/M
3300012202\|Ga0137363_10850041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	774	Open in IMG/M
3300012362\|Ga0137361_10583893	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300012922\|Ga0137394_10693906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Siccirubricoccus	857	Open in IMG/M
3300012929\|Ga0137404_11706016	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300016270\|Ga0182036_10334992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	1162	Open in IMG/M
3300016270\|Ga0182036_10962030	Not Available	702	Open in IMG/M
3300016341\|Ga0182035_10523525	Not Available	1015	Open in IMG/M
3300016341\|Ga0182035_11700617	Not Available	570	Open in IMG/M
3300016357\|Ga0182032_10232175	Not Available	1424	Open in IMG/M
3300016357\|Ga0182032_11445647	Not Available	596	Open in IMG/M
3300016371\|Ga0182034_10278283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis → Nitrobacter hamburgensis X14	1332	Open in IMG/M
3300016371\|Ga0182034_11260670	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300016404\|Ga0182037_10287482	All Organisms → cellular organisms → Bacteria → Proteobacteria	1316	Open in IMG/M
3300016404\|Ga0182037_10378649	Not Available	1160	Open in IMG/M
3300016404\|Ga0182037_11720370	Not Available	559	Open in IMG/M
3300016422\|Ga0182039_11128482	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300016422\|Ga0182039_11235280	Not Available	676	Open in IMG/M
3300016445\|Ga0182038_10379729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1179	Open in IMG/M
3300021168\|Ga0210406_10214344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1593	Open in IMG/M
3300021178\|Ga0210408_10488671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	979	Open in IMG/M
3300021401\|Ga0210393_11238766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	600	Open in IMG/M
3300025910\|Ga0207684_10536835	Not Available	1001	Open in IMG/M
3300025928\|Ga0207700_12022736	Not Available	503	Open in IMG/M
3300025939\|Ga0207665_10649804	Not Available	827	Open in IMG/M
3300027812\|Ga0209656_10097310	Not Available	1551	Open in IMG/M
3300027824\|Ga0209040_10043677	All Organisms → cellular organisms → Bacteria	2745	Open in IMG/M
3300027824\|Ga0209040_10050943	All Organisms → cellular organisms → Bacteria → Proteobacteria	2495	Open in IMG/M
3300028536\|Ga0137415_10473276	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300031057\|Ga0170834_113537829	Not Available	531	Open in IMG/M
3300031474\|Ga0170818_101198269	Not Available	545	Open in IMG/M
3300031543\|Ga0318516_10181799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis → Nitrobacter hamburgensis X14	1211	Open in IMG/M
3300031544\|Ga0318534_10713016	Not Available	566	Open in IMG/M
3300031544\|Ga0318534_10877613	Not Available	503	Open in IMG/M
3300031545\|Ga0318541_10069352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1846	Open in IMG/M
3300031564\|Ga0318573_10228553	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300031572\|Ga0318515_10683797	Not Available	543	Open in IMG/M
3300031573\|Ga0310915_10268023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1203	Open in IMG/M
3300031573\|Ga0310915_10432207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis → Nitrobacter hamburgensis X14	935	Open in IMG/M
3300031681\|Ga0318572_10884971	Not Available	530	Open in IMG/M
3300031708\|Ga0310686_115877134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	547	Open in IMG/M
3300031719\|Ga0306917_10412232	Not Available	1056	Open in IMG/M
3300031719\|Ga0306917_10644448	All Organisms → cellular organisms → Bacteria → Proteobacteria	833	Open in IMG/M
3300031720\|Ga0307469_11730332	Not Available	603	Open in IMG/M
3300031724\|Ga0318500_10599520	Not Available	558	Open in IMG/M
3300031736\|Ga0318501_10300955	Not Available	856	Open in IMG/M
3300031736\|Ga0318501_10729321	Not Available	547	Open in IMG/M
3300031747\|Ga0318502_10792162	Not Available	574	Open in IMG/M
3300031764\|Ga0318535_10366928	Not Available	643	Open in IMG/M
3300031765\|Ga0318554_10609505	Not Available	615	Open in IMG/M
3300031778\|Ga0318498_10188403	Not Available	937	Open in IMG/M
3300031781\|Ga0318547_10870322	Not Available	562	Open in IMG/M
3300031782\|Ga0318552_10312117	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300031793\|Ga0318548_10594105	Not Available	539	Open in IMG/M
3300031795\|Ga0318557_10257182	Not Available	800	Open in IMG/M
3300031795\|Ga0318557_10552687	Not Available	528	Open in IMG/M
3300031798\|Ga0318523_10179839	Not Available	1055	Open in IMG/M
3300031805\|Ga0318497_10292235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis → Nitrobacter hamburgensis X14	907	Open in IMG/M
3300031832\|Ga0318499_10203878	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300031833\|Ga0310917_10053219	All Organisms → cellular organisms → Bacteria → Proteobacteria	2492	Open in IMG/M
3300031845\|Ga0318511_10385101	Not Available	641	Open in IMG/M
3300031846\|Ga0318512_10100827	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1357	Open in IMG/M
3300031890\|Ga0306925_11829142	Not Available	580	Open in IMG/M
3300031893\|Ga0318536_10255195	Not Available	891	Open in IMG/M
3300031910\|Ga0306923_10724231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1105	Open in IMG/M
3300031910\|Ga0306923_10750049	Not Available	1082	Open in IMG/M
3300031912\|Ga0306921_10483148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1441	Open in IMG/M
3300031941\|Ga0310912_10134427	Not Available	1854	Open in IMG/M
3300031942\|Ga0310916_10991961	Not Available	701	Open in IMG/M
3300031945\|Ga0310913_10623068	Not Available	764	Open in IMG/M
3300031946\|Ga0310910_10366251	All Organisms → cellular organisms → Bacteria → Proteobacteria	1140	Open in IMG/M
3300031946\|Ga0310910_11005725	Not Available	651	Open in IMG/M
3300031946\|Ga0310910_11179420	Not Available	594	Open in IMG/M
3300031947\|Ga0310909_11320719	Not Available	579	Open in IMG/M
3300032025\|Ga0318507_10303583	Not Available	694	Open in IMG/M
3300032035\|Ga0310911_10437237	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300032042\|Ga0318545_10074118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1173	Open in IMG/M
3300032054\|Ga0318570_10266167	Not Available	778	Open in IMG/M
3300032055\|Ga0318575_10115843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1311	Open in IMG/M
3300032059\|Ga0318533_10075014	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2297	Open in IMG/M
3300032063\|Ga0318504_10080581	Not Available	1429	Open in IMG/M
3300032066\|Ga0318514_10553292	Not Available	613	Open in IMG/M
3300032090\|Ga0318518_10558935	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300032091\|Ga0318577_10228623	Not Available	890	Open in IMG/M
3300032094\|Ga0318540_10283948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis → Nitrobacter hamburgensis X14	799	Open in IMG/M
3300032094\|Ga0318540_10379313	Not Available	683	Open in IMG/M
3300032160\|Ga0311301_11445368	Not Available	853	Open in IMG/M
3300032205\|Ga0307472_101285719	Not Available	703	Open in IMG/M
3300032261\|Ga0306920_102667614	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300033289\|Ga0310914_10456013	All Organisms → cellular organisms → Bacteria → Proteobacteria	1157	Open in IMG/M
3300033289\|Ga0310914_10875794	Not Available	797	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.04%
Host-Associated	Host-Associated	0.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.15%
Aquatic	Environmental → Aquatic	2.88%
Plants	Host-Associated → Plants	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.15%
Freshwater	Environmental → Aquatic → Freshwater	2.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.42%
Loam	Environmental → Terrestrial → Soil → Loam	6.73%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	76.92%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.58%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.73%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	51.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.15%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.77%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070711_1002734392	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LVTPITLFRSDRLRVRLAAFLDISRAALRAMAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWSMIAAQVTGPVLLAAGFLVRPLALLMLVLTLLAQSLG
Ga0070698_1004165831	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VTPITLYRSDRLRVRLAAFLDISRAALRAMAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPMIAAKVMGPVLLAAGFLVR
Ga0070697_1009887181	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VTPITLYRSDRLRVRLAAFLDISRAALRAMAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFYATWPIIAARVTGPVLLAAGFFVRPLALLMLV
Ga0070717_100860551	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VTPITLYRSDRLRVRLAAFLDISRAALRAMAPIVDLLVRLSLAKAFFAPGMLPGGNIGDFHATWPMIAAKVMGPVLLAAGFLVRPLALLMLV
Ga0066665_103697671	3300006796	Soil	VRPITLYHSDRLRVRLAAFLDISRAALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPMIAAQVMGPV
Ga0099827_109950061	3300009090	Vadose Zone Soil	MRPLYRGDLLRVRLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLLAAGFLVRPLALLMLVLTLLAQFLGAPQDEH
Ga0066709_1016253731	3300009137	Grasslands Soil	MRPLYRGDLLRVRLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIHATWPMITAQVTGPVLLAAGFLVRPLALLMLV
Ga0075423_129170491	3300009162	Populus Rhizosphere	VRLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPALL
Ga0126372_128722262	3300010360	Tropical Forest Soil	VRLAAFLDISRTALRAVTPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLLAAGVFVRPLALLMLVLTLSAQSFGAP
Ga0126372_130240741	3300010360	Tropical Forest Soil	VRLAAFLDISRTALRATAPIVDLLVRLSLAKAFFAPRMLPGGDIGDFHVSWPIIAARVTGPVLLAAGVFVRPLALLMLVLTLSGQSFGA
Ga0126381_1033712061	3300010376	Tropical Forest Soil	VRLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAAQVTGPVLLAAGFLVRPLALLMLVLTFLAQSLGAPQDE
Ga0137363_108500411	3300012202	Vadose Zone Soil	MRPLYRGDLLRVRLAAFLDISRAALRAMAPIVDLLVRLSLAKAFFAPGMLPGGDIHATWPMITAQVTGPVLLAAGFLVRPLALLMLVLTLLVQF
Ga0137361_105838931	3300012362	Vadose Zone Soil	MRPLYRGDLLRVRLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIHATWPMITSQVTGPVLLA
Ga0137394_106939061	3300012922	Vadose Zone Soil	VTPITLYHSDRLRVRLAAFLDISRAALRAMAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLLAAGFF
Ga0137404_117060161	3300012929	Vadose Zone Soil	VTPITLYRSDRLRERLAAFLDISGAALRAMAPIVDLLVRLSLAKAFFAPGMLPGGDIHATWPMITAQVTGPVLLAAGFLVRPLALLMLGWTLLAQLRGA
Ga0182036_103349921	3300016270	Soil	MSNSRAIVKAVRPIILYHSDRLRVRLAAFLDVSRTTLRAMAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVL
Ga0182036_109620301	3300016270	Soil	MINGEQGEEMTNSPSHSEGGKPVRPITLYNSDRLRVRLAAFLDTSRTALRGVAPIVDLLVRLSLAKAFFAAGMLPGGDIGDFHATWPIIAARVTGPVLLAAGLFVRPLALLMLV
Ga0182035_105235251	3300016341	Soil	MANSPASEGGKPVGPIALYHSDRLRVRLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDLHATWPIIAARVTGPVLLAAGLFVRPLAL
Ga0182035_115195591	3300016341	Soil	VRPITLYHSDRLRVRLATFLDISRTALRGVAPIVDLLVRLSLAKAFFAAGMLPGGDIGDFHATWPIIA
Ga0182035_117006171	3300016341	Soil	VRPITLYHSDRLRVRLATFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLLA
Ga0182032_102321751	3300016357	Soil	VRPITLYDSDRLRVRLAAFLDISRTALRAMAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLLAAGLFVRPLVSESESYRLYYALTDCRA
Ga0182032_114456471	3300016357	Soil	MRPITLYDSDRLRVRMAAFLDISRTALRAAAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHVTWPIIAARVTGPVLLAAGFFVR
Ga0182034_102782831	3300016371	Soil	MANSPASEGGKPVGPIALYHSDRLRVRLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDLHATWPIIAARVTGPVLLAAGVFVRPLALLM
Ga0182034_112606701	3300016371	Soil	VRPITLYNSDRLRVRLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAAR
Ga0182037_102874824	3300016404	Soil	VRPLTLYDSDRLRVRLAVFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLLA
Ga0182037_103786491	3300016404	Soil	VRPITLYDSDRLRVRLAAFLDISRTALRAMAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLLA
Ga0182037_117203701	3300016404	Soil	VRPITLYHSDRLRVRLATFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLL
Ga0182039_111284822	3300016422	Soil	VRPITLYASDRLRARLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAAQVTGPVLLAAGFLVRPLALL
Ga0182039_112352801	3300016422	Soil	MINGEQGKEMTNSPSHSEGGKPVRPITLYDSDRLRVRLAAFLDTSRTALRGVAPIVDLLVRLSLAKAFFAAGMLPGGDIGDFHATWPIIAARVTGPVLLAAGLFVRPLAL
Ga0182038_103797291	3300016445	Soil	VRPITLYASDRLRARLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDLHATWPIIAARVTGPVLLAAGLFVRPLALLML
Ga0210406_102143441	3300021168	Soil	VGPITLYHSDRLRVRLAAFLDISRTALRAAAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFYATWPIIAARVTGPVLLAAGFFVRP
Ga0210408_104886711	3300021178	Soil	VRPITLYHSDRLRVRLAAFLDISRTALRAVAPMVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLLTAGL
Ga0210393_112387662	3300021401	Soil	VRPITLYHSDRLRVRLAAFLDISRTALRAVAPMVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLLAAG
Ga0207684_105368351	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VTPITLYRSDRLRVRLAAFLDISRAALRAMAPIVDLLVRLSLAKAFFAPGMLPGGDFHATWPMIAAKVMG
Ga0207700_120227361	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VTPITLYRSDRLRVRLAAFLDISRAALRAMAPIVDLLVRLSLAKAFFAPGMLPRGDFHATWPMIAAKVMGPVLLAAGFLVRPLALLMLVLTLLAQFLGVPQDEHL
Ga0207665_106498041	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VTPITLYRSDRLRVRLAAFLDISRAALRAMAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFYATWPIIAARVTGPVLLAAGFFVRPLALLMLVLTLSAQSLRPTAPG
Ga0209656_100973102	3300027812	Bog Forest Soil	VSNPITFFRDDGLRARLAALLDVSGAVLRVAAPVVDLLVRLSLAKAFFAPGMLPGSDIVDLRTAWPMILAQVMGPVLLAAGFLVRPLALLMLILGFDPNAPVGKGGGRVRRAG
Ga0209040_100436774	3300027824	Bog Forest Soil	VRPITLYRSDRLRVRLAAFLDISRAALRAMAPIVDLLVRLSLAKAFFAPGMLPGSDIGNFHATWPMIAAQVTGPVLLAAGFLVRPLALLMLVLTLLAQSLGVPQ
Ga0209040_100509432	3300027824	Bog Forest Soil	VRPITLYRSDRLRVRLAAFLDISRATLRAMAPIVDLLIRLSLAKAFFAPGMLPGGDIGDFHATWPMIAAKVMGPALLAAGFLVRPLALLMLVLTLLAQSLGVPQDEHL
Ga0137415_104732761	3300028536	Vadose Zone Soil	LNPVAFYRGDGLRARLAVLLDISRAVLRMAAPVVDLLVRLSLAKAFFAPGMPPGSDVGDFRTAWPMILAQVMGPVLLAAGFLVRPVALLMLVLTLL
Ga0170834_1135378291	3300031057	Forest Soil	VTPITLYHSDRLRVRLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDFGDFHATWPMIAAKVMGPVLLAAGFLVRPLALLMLVLTLLAQS
Ga0170818_1011982691	3300031474	Forest Soil	VRPITLYHSDRLRVRLAAFLDISRTALRTVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDIHATWPIIAARVT
Ga0318516_101817992	3300031543	Soil	MTLYDSDRLRVGLATVLDIGRTAVRAVAPIVDLLVRLSLAKAFFAPGMLPDGDIGDFHATWPIIAAQVTGPVLLAAGLFVRPLSLLMLVLTLSTQSLG
Ga0318534_107130161	3300031544	Soil	VRPITPYHSDRLRVRLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLSGGDIGDFHATWPIIAARVTGPVLLAAGVFVRPLALLMLVLTLSGQSFGAPQDEHLFW
Ga0318534_108776131	3300031544	Soil	MINGEQGKEMTNSPSHSEGGKPVRPITLYDSDRLRVRLAAFLDTSRTALRGVAPIVDLLVRLSLAKAFFAAGMLPGGDIGDFHATWPIIAARVTGPVLLAAGLFVRPLALLM
Ga0318541_100693521	3300031545	Soil	VRPITLYDSDRLRVRLAAFLDISRTALRAMAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLLAAGVFVRSLALLMLGFTLSAQSIG
Ga0318573_102285532	3300031564	Soil	VRPLTLYDSDRLRVRLAVFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLLAAGFFVRPLALLMLVLTLSAQSLGAPQD
Ga0318515_106837971	3300031572	Soil	VRPITLYHSDRLRVRLATFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLLAAGFFVRPLALLMLGLTLSAQSM
Ga0310915_102680233	3300031573	Soil	VRPITPYHSDRLRVRLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLSGGDIGDFHATWPIIAARVTGPVLLAAGVF
Ga0310915_104322072	3300031573	Soil	MINGEQGKEMTNSPSHSEGGKPLRPITLYNSDRLRVRLAAFLDTSRTALRGVAPIVDLLVRLSLAKAFFAAGMLPGGDIGDFHATWPIIAARVTGPVLLAAGLFVRPLALLMLVLTLSAQSLGAPQD
Ga0318572_108849711	3300031681	Soil	MTLYDSDRLRVGLATVLDIGRTAVRAVAPIVDLLVRLSLAKAFFAPGMLPDGDIGDFHATWPIIAA
Ga0310686_1158771341	3300031708	Soil	VTEAQRPPPLYRNDWLRVRLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGSDIADFHATWPMIAARVTGPVLLAAGFLVRPLALLMLVLTLLAQSLGAPQDEHPFWAA
Ga0306917_104122321	3300031719	Soil	MANSPASEGGKPVGPIALYHSDRLRVRLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDLHATWPIIAARVTGPVLLAAGLFVRPLALLMLVLTLLAQS
Ga0306917_106444481	3300031719	Soil	VRPLTLYDSDRLRVRLAVFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLLAAGFFVRPLA
Ga0307469_117303321	3300031720	Hardwood Forest Soil	VTPITLYRSDRLRVRLAAFLDISRAALRAMAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFYATWPIIAARVTGPVLLAAGFFVRPL
Ga0318500_105995201	3300031724	Soil	VRPITLYHSDRLRVRLAAFLDISRTALRAVAPLVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAAQVTGPVLL
Ga0318501_103009552	3300031736	Soil	MANSPASEGGKPVGPIALYHSDRLRVRLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDLHATWPIIAARVTGPVLL
Ga0318501_107293211	3300031736	Soil	MRPITLYDSDRLRVRMAAFLDISRTALRAAAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLLAAGFFVRPLALLMLGLTLSAQSM
Ga0318502_107921621	3300031747	Soil	MIYGEQGKEMTNSPSHSEGGKPVRPITLYNSDRLRVRLAAFLDTSRTALRGVAPIVDLLVRLSLAKAFFAAGMLPGGDIGDFHAIWPIIAARVTGPVLLAAGLFVRPLALLMLVLTL
Ga0318535_103669281	3300031764	Soil	MINGEQGKEMTNSPSHSEGGKPVRPITLYNSDRLRVRLAAFLDTSRTALRGVAPIVDLLVRLSLAKAFFAAGMLPGGDIGDFHATWPIIAARVTGPVLLAAGLFVRPLALLMLVLT
Ga0318554_106095052	3300031765	Soil	VRPITLYARDRLRARLATFLDISRTALRAAAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLLAAGFFVRPLALLMLGLTLSAQSM
Ga0318498_101884032	3300031778	Soil	MANSPASEGGKPVGPIALYHSDRLRVRLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHVTWPIIAARVTGPVLL
Ga0318547_108703221	3300031781	Soil	MANSPASEGGKPVGPIALYHSDRLRVRLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLSGGDIGDFHATWPIIAARVTGPVLLAAGVFVRPLALLMLVLTLSG
Ga0318552_103121172	3300031782	Soil	VRPITLYHSDRLRVRLATFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLLAAGFLVRPL
Ga0318548_105941051	3300031793	Soil	VRPLTLYDSDRLRVRLAVFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLLAAGFFVRPLALLMLVLTLSAQSLGAPQDEHLFW
Ga0318557_102571821	3300031795	Soil	MANSPASEGGKPVGPIALYHSDRLRVRLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDLHATWPIIAARVTGPVLLAAGLFVRPLALLMLVLTLLAQSLGAPQD
Ga0318557_105526871	3300031795	Soil	MINGEQGKEMTNSPSHSEGGKPLRPITLYNSDRLRVRLAAFLDTSRTALRGVAPIVDLLVRLSLAKAFFAAGMLPGGDIGDFHATWPIIAARVTGPVLLAAGLFVRPLALLMLVLTLSAQSLG
Ga0318523_101798391	3300031798	Soil	MANSPASEGGKPVGPIALYHSDRLRVRLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLSGGDIGDFHATWPIIAARVTGPVLLAAGVFVRPLALLMLVLTLSGQSF
Ga0318497_102922351	3300031805	Soil	MRPITLYDSDRLRVRMAAFLDISRTALRAAAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLLAAGFFVRPLALLMLVLTLSAQPLGAPQDEHLFW
Ga0318567_104709312	3300031821	Soil	MINGEQGKEMTNSPSHSEGGKPLRPITLYNSDRLRVRLAAFLDTSRTALRGVAPIVDLLVRLSLAKAFFAAGMLPGGDIGDFHATWPIIAARVTGPVLL
Ga0318499_102038782	3300031832	Soil	MINGEQGKEMTNLPSHSEGGKPVRPITLYNSDRLRVRLAAFLDTSRTALRGVAPIVDLLVRLSLAKAFFAAGMLPGGDIGDFHATWPIIAARVTGPVLLAAGLFVRPL
Ga0310917_100532191	3300031833	Soil	VRPITLYDSDRLRVRLAAFLDISRTALRAMAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLLAAGVFVRSLALLM
Ga0318511_103851011	3300031845	Soil	VRPITLYHSDRLRVRLAAFLDISRTALRAVAPLVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAAQVTGPVLLAAGFLVRPLALLMLVLTFLAQSLGAPQDEHLF
Ga0318512_101008272	3300031846	Soil	VRPITLYHSDRLRVRLAAFLDISRTALRAVAPLVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAAQVTGPVLLAAGFLVRPLALL
Ga0306925_118291421	3300031890	Soil	VGPITLYDSDRLRVRLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHVTWPIIAARVTGPVLLAAGFFVRTLALLMLVLTLSAQSLGA
Ga0318536_102551952	3300031893	Soil	VGPITLYDSDRLRVRLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHVTWPIIAARVTGPV
Ga0306923_107242311	3300031910	Soil	VRPITLYHSDRLRVRLATFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLLAAGFLVRPLALLMLVLTLS
Ga0306923_107500491	3300031910	Soil	MANSPASEGGKPVGPIALYHSDRLRVRLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDLHATWPIIA
Ga0306921_104831484	3300031912	Soil	VRPITLYHSDRLRVRLATFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLLAAGFFVRPLALLMLVLTLSAQS
Ga0310912_101344274	3300031941	Soil	VRPITLYDSDRLRVRLAAFLDISRTALRAMAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLLAAGFFVRPLALLMLVLTLSAQSLG
Ga0310916_109919611	3300031942	Soil	VRPITLYHSDLLRVRLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHANWPIIAARVTGPVLLAAGVFVRPLALL
Ga0310913_106230682	3300031945	Soil	MINGEQGKEMTNSPSHSEGGKPVRPITLYDSDRLRVRLAAFLDTSRTALRGVAPIVDLLVRLSLAKAFFAAGMLPGGDIGDFHATWPIIAARVTGPVLLAAGLFVRPLALLMLVLTLSAQ
Ga0310910_103662511	3300031946	Soil	VRPLTLYDSDRLRVRLAVFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLLAAGFFVRPLALLML
Ga0310910_110057251	3300031946	Soil	VRPITLYNSDRLRVRLAAFLDTSRTALRGVAPIVDLLVRLSLAKAFFAAGMLPGGDIGDFHATWPIIAARVTGPVLLAAGLFVRPLALLMLVLTLSAQSLGAP
Ga0310910_111794201	3300031946	Soil	MANSPASEGGKPVGPIALYHSDRLRVRLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDLHATWPIIAARVTGPVLLAAGLFVRPLALLM
Ga0310909_113207191	3300031947	Soil	VRPITLYDSDRLRVRLAAFLDISRTALRAMAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLLAAGVFVRSLALLMLGLTL
Ga0318507_103035832	3300032025	Soil	VGPITLYDSDRLRVRLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHVTWPIIAARVTGPVLL
Ga0310911_104372372	3300032035	Soil	VRPITLYNSDRLRVRLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLLAAGFFVRPLALLMLGLTLSAQSMGAPQDEHLFWSA
Ga0318559_102560322	3300032039	Soil	MINGEQGKEMTNSPSHSEGGKPGRPITLYDSDRLRVRLAAFLDTSRTALRGVAPIVDLLVRLSLAKAFFAAGMLPGGDIGDFHATWPIIAARVTGPVLLAAGLFV
Ga0318545_100741183	3300032042	Soil	MINGEQGKEMTNSPSHSEGGKPGRPITLYDSDRLRVRLAAFLDTSRTALRGVAPIVDLLVRLSLAKAFFAAGMLPGGDIGDFHATWPIIAARVTGPVLLAAGLFVRPLALLMLVLTLSAQSL
Ga0318570_102661671	3300032054	Soil	VRPITLYDSDRLRVRLAAFLDISRTALRAMAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLLAAGFFVRPLALLMLVLTLSAQSLGAP
Ga0318575_101158431	3300032055	Soil	MINGEQGKEMTNSPSHSEGGKPGRPITLYNSDRLRVRLAAFLDTSRTALRGVAPIVDLLVRLSLAKAFFAAGMLPGGDIGDFHATWPIIAARVTGPVLLAAGLFVRPLALLMLVLTLSAQSL
Ga0318533_100750141	3300032059	Soil	VRPITLYDSDRLRVRLAAFLDISRTALRAMAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARV
Ga0318504_100805811	3300032063	Soil	VRPITLYDSDRLRVRLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDLHATWPIIAARVTGPVLLAAGLFVRPLALLMLVLTL
Ga0318514_105532921	3300032066	Soil	VRPITLYASDRLRARLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFNATWPIIAARVTGPVLLA
Ga0318518_105589352	3300032090	Soil	VRPITLYHSDLLRVRLAAFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHANWPIIAARVTGPVLL
Ga0318577_102286232	3300032091	Soil	VRPITLYHSDRLRVRLAAFLDISRTALRAVAPLVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAAQVTGPVLLAAGFLVRPLALVMLVLTFLAQSLGAPQDEHLFW
Ga0318540_102839481	3300032094	Soil	MRPITLYDSDRLRVRMAAFLDISRTALRAAAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLLAAGFFVRPLALLMLVLTLSAQSLGAPQDEH
Ga0318540_103793131	3300032094	Soil	VRPITLYDSDRLRVRLATFLDISRTALRAVAPIVDLLVRLSLAKAFFAAGMLPGGDIGDFHATWPIIAARVTGPVLLAAGFFVRPLALLMLVLTLSAQSLGAPQDEHLF
Ga0311301_114453682	3300032160	Peatlands Soil	VRPITLYRGDRLRVGLAAFLDISRSALRAVAPIVDLLVRLSLAKAFFAPGMLPGSDIGNFHATWPMIAAQVTGPVLLAAGFLVRPLALLMLVLTLLAQSLGVPQG
Ga0307472_1012857191	3300032205	Hardwood Forest Soil	VGPITLYHSDRLRVRLAAFLDISRTALRAAAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFYATWPIIAARVTGPVLLAAGFFVRPLALLMLVLTLSAQSLPAPQH
Ga0306920_1026676142	3300032261	Soil	VRPITLYDSDRLRVRLATFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLLAAGFF
Ga0310914_104560131	3300033289	Soil	VRPLTLYDSDRLRVRLAVFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTG
Ga0310914_108757941	3300033289	Soil	VRPITLYHSDRLRVRLATFLDISRTALRAVAPIVDLLVRLSLAKAFFAPGMLPGGDIGDFHATWPIIAARVTGPVLLAAGFFVRP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096983

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences