Metagenome Family F096938

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F096938
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	116 residues
Representative Sequence	SLRSPLPLMVAGIGVAVLVIAVVTLPPRPAPPDPSQTATLGDSEALTLVAHEMRSGDSAARVVNEGQVRFNDGTWYISVGGAHFHFTQRNRIVVADDPPAITLQYR
Number of Associated Samples	71
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	31.73 %
% of genes near scaffold ends (potentially truncated)	35.58 %
% of genes from short scaffolds (< 2000 bps)	87.50 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (98.077 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (31.731 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.692 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 34.33% β-sheet: 14.18% Coil/Unstructured: 51.49%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF03466	LysR_substrate	7.69
PF03069	FmdA_AmdA	4.81
PF00005	ABC_tran	3.85
PF00465	Fe-ADH	2.88
PF08241	Methyltransf_11	1.92
PF13472	Lipase_GDSL_2	1.92
PF01127	Sdh_cyt	0.96
PF13463	HTH_27	0.96
PF13524	Glyco_trans_1_2	0.96
PF04203	Sortase	0.96
PF00563	EAL	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	4.81
COG0337	3-dehydroquinate synthetase	Amino acid transport and metabolism [E]	2.88
COG0371	Glycerol dehydrogenase or related enzyme, iron-containing ADH family	Energy production and conversion [C]	2.88
COG1454	Alcohol dehydrogenase, class IV	Energy production and conversion [C]	2.88
COG1979	Alcohol dehydrogenase YqhD, Fe-dependent ADH family	Energy production and conversion [C]	2.88
COG2009	Succinate dehydrogenase/fumarate reductase, cytochrome b subunit	Energy production and conversion [C]	0.96
COG2142	Succinate dehydrogenase, hydrophobic anchor subunit	Energy production and conversion [C]	0.96
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.96
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.96
COG3764	Sortase (surface protein transpeptidase)	Cell wall/membrane/envelope biogenesis [M]	0.96
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.96
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.08 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.96 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	90.38 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	88.46 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.92 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.96 %
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	0.96 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	84.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.92 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.96 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	0.96 %
Ochrophyta	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta	0.96 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	84.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.92 %
Natrialbales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Natrialbales	0.96 %
Sphaerobacteridae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae	0.96 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.96 %
Pelagophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae	0.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	84.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.92 %
Sphaerobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales	0.96 %
Natrialbaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Natrialbales → Natrialbaceae	0.96 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.96 %
Pelagomonadales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales	0.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	84.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.92 %
Haloterrigena	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Natrialbales → Natrialbaceae → Haloterrigena	0.96 %
Sphaerobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae	0.96 %
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	0.96 %
Aureococcus	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Aureococcus	0.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	84.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.92 %
Sphaerobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae	0.96 %
Haloterrigena salina	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Natrialbales → Natrialbaceae → Haloterrigena → Haloterrigena salina	0.96 %
Myxococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus	0.96 %
Aureococcus anophagefferens	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Aureococcus → Aureococcus anophagefferens	0.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	84.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.92 %
Myxococcus xanthus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus xanthus	0.96 %
Sphaerobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter	0.96 %
Haloterrigena salina	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Natrialbales → Natrialbaceae → Haloterrigena → Haloterrigena salina	0.96 %
Aureococcus anophagefferens	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Aureococcus → Aureococcus anophagefferens	0.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	84.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.92 %
Sphaerobacter thermophilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus	0.96 %
Myxococcus xanthus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus xanthus	0.96 %
Haloterrigena salina	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Natrialbales → Natrialbaceae → Haloterrigena → Haloterrigena salina	0.96 %
Aureococcus anophagefferens	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Aureococcus → Aureococcus anophagefferens	0.96 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005171\|Ga0066677_10425302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	759	Open in IMG/M
3300005171\|Ga0066677_10831253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	510	Open in IMG/M
3300005176\|Ga0066679_10878961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	566	Open in IMG/M
3300005177\|Ga0066690_10446354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	876	Open in IMG/M
3300005177\|Ga0066690_10459377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	861	Open in IMG/M
3300005177\|Ga0066690_10642392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	707	Open in IMG/M
3300005178\|Ga0066688_10184345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1320	Open in IMG/M
3300005179\|Ga0066684_10377970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	950	Open in IMG/M
3300005181\|Ga0066678_10145392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus	1479	Open in IMG/M
3300005187\|Ga0066675_11282112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	541	Open in IMG/M
3300005435\|Ga0070714_101375191	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Natrialbales → Natrialbaceae → Haloterrigena → Haloterrigena salina	689	Open in IMG/M
3300005435\|Ga0070714_102464935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	505	Open in IMG/M
3300005436\|Ga0070713_100916295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	843	Open in IMG/M
3300005436\|Ga0070713_102032260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	557	Open in IMG/M
3300005447\|Ga0066689_10192058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1236	Open in IMG/M
3300005454\|Ga0066687_10226949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1032	Open in IMG/M
3300005467\|Ga0070706_100356686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1363	Open in IMG/M
3300005467\|Ga0070706_100416750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1250	Open in IMG/M
3300005467\|Ga0070706_100841043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	849	Open in IMG/M
3300005468\|Ga0070707_100619382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1045	Open in IMG/M
3300005533\|Ga0070734_10547415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	659	Open in IMG/M
3300005537\|Ga0070730_10001090	All Organisms → cellular organisms → Bacteria	27022	Open in IMG/M
3300005537\|Ga0070730_10014095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6427	Open in IMG/M
3300005537\|Ga0070730_10079278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2303	Open in IMG/M
3300005537\|Ga0070730_10131820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1708	Open in IMG/M
3300005537\|Ga0070730_10859448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	570	Open in IMG/M
3300005542\|Ga0070732_10007734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5844	Open in IMG/M
3300005542\|Ga0070732_10368860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	865	Open in IMG/M
3300005552\|Ga0066701_10088486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1789	Open in IMG/M
3300005552\|Ga0066701_10741137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	588	Open in IMG/M
3300005554\|Ga0066661_10348794	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300005569\|Ga0066705_10192826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1272	Open in IMG/M
3300005569\|Ga0066705_10425586	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300005569\|Ga0066705_10788499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	567	Open in IMG/M
3300005575\|Ga0066702_10149716	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300005575\|Ga0066702_10170992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1299	Open in IMG/M
3300005576\|Ga0066708_10054756	All Organisms → cellular organisms → Bacteria	2246	Open in IMG/M
3300005598\|Ga0066706_10137342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1824	Open in IMG/M
3300005614\|Ga0068856_102692152	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus xanthus	503	Open in IMG/M
3300005764\|Ga0066903_100105457	All Organisms → cellular organisms → Bacteria	3832	Open in IMG/M
3300005764\|Ga0066903_106925750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	588	Open in IMG/M
3300005995\|Ga0066790_10449661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	551	Open in IMG/M
3300006800\|Ga0066660_10216078	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300006800\|Ga0066660_11645468	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Aureococcus → Aureococcus anophagefferens	510	Open in IMG/M
3300006854\|Ga0075425_101605321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	733	Open in IMG/M
3300009012\|Ga0066710_100256531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2534	Open in IMG/M
3300009012\|Ga0066710_100692601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1553	Open in IMG/M
3300009012\|Ga0066710_100903794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1359	Open in IMG/M
3300009012\|Ga0066710_100908903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1355	Open in IMG/M
3300009090\|Ga0099827_10792315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	820	Open in IMG/M
3300009137\|Ga0066709_100393245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1921	Open in IMG/M
3300009137\|Ga0066709_102634020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	672	Open in IMG/M
3300010359\|Ga0126376_12869181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	532	Open in IMG/M
3300010362\|Ga0126377_10228078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1801	Open in IMG/M
3300010376\|Ga0126381_102293862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	775	Open in IMG/M
3300011269\|Ga0137392_11055957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	667	Open in IMG/M
3300011270\|Ga0137391_10340710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1289	Open in IMG/M
3300011271\|Ga0137393_11596979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	541	Open in IMG/M
3300012096\|Ga0137389_11483371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	574	Open in IMG/M
3300012201\|Ga0137365_10431786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	970	Open in IMG/M
3300012209\|Ga0137379_10482287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1148	Open in IMG/M
3300012209\|Ga0137379_10653226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	958	Open in IMG/M
3300012210\|Ga0137378_11413149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	609	Open in IMG/M
3300012212\|Ga0150985_113735673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	852	Open in IMG/M
3300012212\|Ga0150985_122830049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	675	Open in IMG/M
3300012356\|Ga0137371_10479589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	961	Open in IMG/M
3300012359\|Ga0137385_10773497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	799	Open in IMG/M
3300012359\|Ga0137385_11273522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	598	Open in IMG/M
3300012363\|Ga0137390_10192462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2026	Open in IMG/M
3300012469\|Ga0150984_102368300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	661	Open in IMG/M
3300012971\|Ga0126369_12389663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	615	Open in IMG/M
3300013308\|Ga0157375_11894662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	708	Open in IMG/M
3300013772\|Ga0120158_10212307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1000	Open in IMG/M
3300014052\|Ga0120109_1087101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	718	Open in IMG/M
3300014968\|Ga0157379_12445484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	522	Open in IMG/M
3300016319\|Ga0182033_11954297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	534	Open in IMG/M
3300018468\|Ga0066662_11250750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	756	Open in IMG/M
3300019888\|Ga0193751_1198556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	674	Open in IMG/M
3300021362\|Ga0213882_10004260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4914	Open in IMG/M
3300021377\|Ga0213874_10406897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	530	Open in IMG/M
3300021384\|Ga0213876_10007633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5873	Open in IMG/M
3300021388\|Ga0213875_10053397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1892	Open in IMG/M
3300021388\|Ga0213875_10401467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	654	Open in IMG/M
3300021388\|Ga0213875_10644988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	513	Open in IMG/M
3300025910\|Ga0207684_10759787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	821	Open in IMG/M
3300025922\|Ga0207646_10455895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1154	Open in IMG/M
3300025928\|Ga0207700_11549199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	587	Open in IMG/M
3300025981\|Ga0207640_10682792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	878	Open in IMG/M
3300026527\|Ga0209059_1201418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	674	Open in IMG/M
3300026550\|Ga0209474_10113475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1807	Open in IMG/M
3300026552\|Ga0209577_10348515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1091	Open in IMG/M
3300026552\|Ga0209577_10413263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	964	Open in IMG/M
3300027842\|Ga0209580_10047693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1990	Open in IMG/M
3300027842\|Ga0209580_10287433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	818	Open in IMG/M
3300027857\|Ga0209166_10010795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5929	Open in IMG/M
3300027857\|Ga0209166_10055199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2303	Open in IMG/M
3300027857\|Ga0209166_10164263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1207	Open in IMG/M
3300027857\|Ga0209166_10205872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1056	Open in IMG/M
3300028536\|Ga0137415_10780453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	766	Open in IMG/M
3300028536\|Ga0137415_10928083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	681	Open in IMG/M
3300031520\|Ga0272428_1017103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	8105	Open in IMG/M
3300031668\|Ga0318542_10577755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	586	Open in IMG/M
3300032261\|Ga0306920_102177158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	772	Open in IMG/M
3300034268\|Ga0372943_0513765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	782	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.50%
Host-Associated	Host-Associated	12.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.50%
Plants	Host-Associated → Plants	12.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.58%
Roots	Host-Associated → Plants → Roots	4.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.85%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	0.96%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.19%
Loam	Environmental → Terrestrial → Soil → Loam	14.42%
Unclassified	Host-Associated → Plants → Roots → Unclassified	4.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.96%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	31.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.58%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	4.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.88%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.96%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	25.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.42%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	13.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.73%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	4.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.92%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.96%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	0.96%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.96%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014052	Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031520	Rock endolithic microbial communities from Victoria Land, Antarctica - Finger Mt nord	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066677_104253022	3300005171	Soil	MRAMANPLVSLRSPVPLIVAGIGIAILVIAVVTLPPRPAAPDPAQTPTLDDSEVLALVAHEMRSADAAARVFSDGQVRFQDGSWYISVGPAHFHLSNRNRIVVADDPPAIQLQYRSGP*
Ga0066677_108312531	3300005171	Soil	ANPLVSLRSPLPLMVAGIGVALLVIAAVTLPPRPPAPDVNQTRNLSDAEALAIVAHDMRTADAAARVMSDGQTRFDDGTWYISVSGAHFHFTQRNRIVVAEDPPAIQLQFTNQ*
Ga0066679_108789611	3300005176	Soil	LLVIAAVTLPPRPTAPETQAANVSEAEALTIVAHDMRSSDSAARVMTDGHTRFEDGTWYINVGPAHFHFTQRNRIVVAEDPPAVQLQFGQASPPQGG*
Ga0066690_104463541	3300005177	Soil	MVAGIGVALLVIAAVTLPPRPTAPETQAANLSEAEALTIVAHDMRSSDSAARVMSDGHTRFEDGTWYINVGPAHFHFTQRNRIVVAEDPPAVQLQYGQASPQGG*
Ga0066690_104593771	3300005177	Soil	VLEQREMLGADARRSGRQFRDAAHPLVSLRSPLPLMVAGIGVTLLVIAAVTLPPRPAPEPTQTASLSDAEALTIVAHEMRSPAAAERVMTEGQPRFEDGSWYISVGGAHFHFTQRNRIV
Ga0066690_106423922	3300005177	Soil	MLGADAPRRSSGRHFRDAAHPLVSLRSPLPLFVAAIGVTLLVIAAVTLPPRPTPEPTQTANLSDREALTLVAHEMRSSTAAARIMSEGQTRFDDGTWYVTVGGAHFHFTQRNRIVVADDEPAVQIQYG*
Ga0066688_101843452	3300005178	Soil	PPRARHSQAMLGADAPRRPGRRFREAAHPLVSLRSPLPLMVAGIGVTLLVIAAVTLPPRPAAPETQTANLSDAEALTIVAHDMRGSDSAARVMSEGRTRFDDGTWYINVGGAHLHFTQRNRIVVAEDPPAVQLQYSPSSTPDAAPPQ*
Ga0066684_103779702	3300005179	Soil	MVAGIGVALLVIAAVTLPPRPTAPEPQAANLSEAEALTLVAHDMRSADSAARVLSDGHTRFEDGTWYIDVGPAHFHFTQRNRIVVAEDPPAVQLQFGQASPPQGG*
Ga0066678_101453923	3300005181	Soil	MVAGIGVALLVIAAVTLPPRPPAPDVNQTRNLSDAEALAIVAHDMRTADAAARVMSDGQTRFDDGTWYISVSGAHFHFTQRNRIVVAEDPPAIQLQFTNQ*
Ga0066675_112821121	3300005187	Soil	MVAGVGVAILVIAVVTLPPRAAAPDPTQAATLSEAEVKTLVAHEMRSGDAAARVLAEGQVRFDDGTWYISVGGAHFHFTQRNRIVVADDQPAIDLQYRSVASGQ*
Ga0070714_1013751911	3300005435	Agricultural Soil	MLSARSRRQVPLVSLRSPVPLIVAGIGVTLLVIALATLPFRPQPEPVQTATLSDGEALTIVAQQMRSGPAATRVMTDGQSRFNDGTWYVSVGNAHFHFSQRNRLVVAEDQPAIELEYTDPTR*
Ga0070714_1024649351	3300005435	Agricultural Soil	MLTARSRRQVPLVSLRSPLPLMVAGIGVTLLVIAVATLPFRPPPEQPQAPTLSDSEALTIVAQQMRTGAAATRVMSDGQTRFNDGTWYVSVGSAHFHFTQRNRLVVAEDPPAIDL
Ga0070713_1009162952	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VPQAGRSRRSPVLQQREMLSADARRSGRQFRNGAHPLVSLRSPLPLMFAGIGVTLLVIAAVTLPPRPAPEPTQTANLSDAEALTIVAHEMRSTTAAERVMTDGQTRFEDGSWSISVGGAHFHFSQRNRIVVADDPPAIQLEYTP*
Ga0070713_1020322601	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LLVIALATLPFRPPPEAPQQATLSDAEALTIVAHEMRSGTAAARVMNNGQTRFDDGTWYITVDGAHFHFSQRNRIVVAEDQPAIELEYQG*
Ga0066689_101920582	3300005447	Soil	MRDAARPLVSLRSPLPLMVAGIGATILVIAVVTLPPRPAPPDATQTANLGDSEALTLVAHEMRSGDAAARVLNDGQVRFNDGTWYISVGGAHFHFTQRNRIVVADDQPAIDLQYRSVASGQ*
Ga0066687_102269491	3300005454	Soil	MVAGIGVALLVIAAVTLPPRPTAPETQAANVSEAEALTIVAHDMRSSDSAARVMSDGHTRFEDGTWYINVGPAHFHFTQRNRIVVAEDPPAVQLQFGQASPQGG*
Ga0070706_1003566862	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VSLRSPLPLIVAGIGVTLLVIAVVTLPPRPTPESAQTPNISREEALTIVAHDMRSASAAAQVMNEGVATFNDGSWSIGVGNAHFHFTQRNRIVVADDPPAVQLQYNP*
Ga0070706_1004167501	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRDAARPLVSLRSPLPLMVAGIGATILVIAVVTLPPRPTPPDATQTANLGDSEALTLVAHEMRSGDAAARVLNDGQVRFNDGTWYISVGGAHFHFTQRNRIVVADDQPAIDLQYRSVASGQ*
Ga0070706_1008410431	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MLGAEAPRRPGNRFRDAAHPFVSLRSPLPLMVAGIGVALLVIAAFTLPPRQAPEPTQTASLSDAEALTLVAHEMRSGTAAARVLTEGQTRFDNGTWYVSVGGAHFRFTQRNRIVVAEDAPAVQLEYGS*
Ga0070707_1006193822	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	SLRSPLPLIVAGIGVTLLVIAVVTLPPRPTPESAQTPNISREEALTIVAHDMRSASAAAQVMNEGVATFNDGSWSIGVGNAHFHFTQRNRIVVADDPPAVQLQYNP*
Ga0070734_105474152	3300005533	Surface Soil	MLGADAPQRPGRQYRSVAHPLVSLRSPLPLMVAGVGVTLLVIAVVTLPQRPVPEPTQTANLSDQEALTIVAHDMRSGAAAARIMTDAQTRFEDGTWYITLGDAHFHFTQRNHIVVADDGAAIRMEYADATPSP*
Ga0070730_100010905	3300005537	Surface Soil	MRDAARPLVSLRSPLPLIVAGIGITVLVIAVVTLPPRPAPPDPSQTANLGDSEALTLVAHEMRSGESAARVMNAGEARFNDGTWYISVGGAHFHFTQRNRIVVADDPPAIDLQYR*
Ga0070730_100140954	3300005537	Surface Soil	MLGARSRRQVPLVSLRSPVPLIVAGIGVTLLVIAVATLPFRPQPEPVQTATLSDGEALTIVAQQMRSGPAATRVMTDGQTRFNDGTWYISVGNAHFHFSQRNRLVVAEDQPAVDLEYTDPSH*
Ga0070730_100792782	3300005537	Surface Soil	MLGAEAPRRSSGRRVRAVANPLVSLRSPVPLIVAGIGVAILVIAVVTLPPRPAAPDPTQAPTLGDNEVLSLVAHEMRSGDAAARVMNEGQVLWADGTWQVSVGGAHFHLTNRNRIVVADDPPAIQLEYRS*
Ga0070730_101318201	3300005537	Surface Soil	MVGAEVPRGSSSRRMRDAARPLVSLRSPLPLMVAGIGIAVLVIAVVTLPPRPAPPDPSQTANLGDTEALTIVAHEMRSGDAAARVLQDGQVRFNDGTWYVSVGGAHYHFTQRNRIVVADDQPAIDMQYR*
Ga0070730_108594481	3300005537	Surface Soil	MLGADAPRRSSRRFRDAASPLVSLRSPLPLIVAGVGVTLLVIAAVTLPPRPAPEPTQTANLSDAEALTIVAHEMRSSDAALRIMNEGQPTFNDGTWSVAVGGAHFHFTQRNRIVVADDPPAVQLEYSSP*
Ga0070732_100077344	3300005542	Surface Soil	MLGAEAPRRAGRQFRDSPLVSLRSPLPLIVAGIGVTLLVIAAVTLPPRPQPEPAQTANISDAEALTLVAHDMRSAQAAQRVMDEGQTRFNDGTWYISVGGAQFHFTQRNRIVVAENDAAVQLEYAP*
Ga0070732_103688601	3300005542	Surface Soil	VPLIVAGVGLTLLVIAAVTLPPRPQPEPTQTANLSEAEALTLVAHDMRAAPAAQRIMNEGQARFDDGTWYISVGGAHFHFTQRNRIIVAEDPPAVQLEYSD*
Ga0066701_100884861	3300005552	Soil	MVAGIGVALLVIASVTLPPRPPAPDVNQTRNLSDAEALAIVAHDMRTADAAARVMSDGQTRFDDGTWYISVSGAHFHFTQRNRIVVADD
Ga0066701_107411371	3300005552	Soil	MRSVTHPLVSLRSPLPLMVAAIGVAILVIAVVTLPPRPTPPDPSQIATLADSEVLTLVAHEMRSSDAATRVLSDGQVRFDDGSWFVSVGAAHFHFSQRNRIVVADDPPAIQLQYRSVVSDH*
Ga0066661_103487941	3300005554	Soil	MVAGIGVALLVIAAVTLPPRPTAPETQAANLSEAEALTIVAHDMRSSDSAARVMSDGHTRFEDGTWYINVGPAHFHFTQRNRIV
Ga0066705_101928262	3300005569	Soil	MVAGIGVTLLVIAAVTLPPRPAPEPTQTASLSDAEALTIVAHEMRSPAAAERVMTEGQPRFEDGSWYISVGGAHFHFTQRNRIVVADDPPAIQLEYTP*
Ga0066705_104255862	3300005569	Soil	MRAMANPLVSLRSPVPLIVAGIGIAILVIAVVTLPPRPAAPDPAQTPTLDDSEVLALVAHEMRSADAAARALSDGQVRFQDGSWYISVGPAHFHLSNRNRIVVADDPPAIQLQYRSGP*
Ga0066705_107884992	3300005569	Soil	MLGADAPRRSGRRFREAAHPLVSLRSPLPLMVAGIGVALLVIAAVTLPPRPTAPEPQAANLSEAEALTLVAHDMRSADSAARVLSDGHTRFEDGTWYIDVGPAHFHFTQRNRIVVAEDPPAMQLQYGQA
Ga0066702_101497162	3300005575	Soil	MVAGIGVALLVIAAVTLPPRPTAPETQAANVSEAEALTIVAHDMRSSDSAARVMSDGHTRFEDGTWYINVGPAHFHFTQRNRIVVAEDPPAVQLQYGQASPQGG*
Ga0066702_101709921	3300005575	Soil	MRAMANPLVSLRSPVPLIVAGIGIAILVIAVVTLPPRPAAPDPAQTPTLDDSEVLALVAHEMRSADAAARVFSDGQVRFQDGSWYISIGPAHFHLSNRNRIVVADDPPAIQLQYRSGP*
Ga0066708_100547562	3300005576	Soil	MVAGIGVALLVIAAVTLPPRPTAPEPQAANLSEAEALTLVAHDMRSADSAARVLSDGHTRFEDGTWYIDVGPAHFHFTQRNRIVVAEDPPAVQLQYGQASPQGG*
Ga0066706_101373422	3300005598	Soil	MLGADVPRRSGRRFRDVANPLVSLRSPLPLMVAGIGVALLVIAAVTLTPRPPAPDVNQTRNLSDAEALAIVAHDMRTADAAARVMSDGQTRFDDGTWYISVSGAHFHFTQRNRIVVAEDPPAIQLQFTSP*
Ga0068856_1026921521	3300005614	Corn Rhizosphere	SRGREYICLLRPGAIVSPMLGAEVPRRSSSRRMRDAARPLVSLRSPLPLMVAGIGVTVLVIAVVTLPPRPAPPDPSQTATLGDAEALTLVAHEMRSGEAAARVLSDGQVRFDDGTWYVSVGGAHFHFTQRNRIVVADDPPAIDLQYR*
Ga0066903_1001054573	3300005764	Tropical Forest Soil	MLGADAPRRPGRRFREAAHPLVSLRSPLPLMVAGIGVALLVIAAVTLPPRPAAPEPQTANLSDAEALTIVAHDMRSSDSAARVMSEGRTRFDDGSWYINVGGAHFHFTQRNRIVVAEDPPAVQLQYGRSAAPDSTPPQ*
Ga0066903_1069257501	3300005764	Tropical Forest Soil	MISARSRRRVPLVSLRSPLPLMVAGIGVTLLVIALATLPFRPPPEPAQTATLSDSEALTIVAQEMRSGPAGAKVMNNGSTRFNDGTWYITVDNAHFHFSQRNRIVVAEDPPAVQLMYVTAP*
Ga0066790_104496611	3300005995	Soil	SLRSPLPLMVAGIGVAVLVIAVVTLPPRPAPPDPSQTATLGDSEALTLVAHEMRSGDSAARVVNEGQVRFNDGTWYISVGGAHFHFTQRNRIVVADDPPAITLQYR*
Ga0066660_102160781	3300006800	Soil	TLPPRPTAPETQAANLSEAEALTIVAHDMRSSDSAARVMSDGHTRFEDGTWYINVGPAHFHFTQRNRIVVAEDPPAVQLQFGQASPQGG*
Ga0066660_116454681	3300006800	Soil	MLGADIPRRSARRFRDAANPLVSLRSPLPLMVAGIGVALLVIAAVTLPPRPPAPDVNQTRNLSDAEALAIVAHDMRTADAAARAMSDGQTRFDYGTWYISVSGAHFHFTQRNRIFVAEDPPAIQLQFTSP*
Ga0075425_1016053211	3300006854	Populus Rhizosphere	ANPLVSLRSPLPLMVAGLGVTLLVIAVVTLPPRPPAPDVNQTRQLSDAEALAIVAHEMRSADGAARVMNDGQTRFDDGTWYISVSGAHFHFTQRNRIVVAEDPPAIQLQYAGP*
Ga0066710_1002565312	3300009012	Grasslands Soil	MLGADIPRRSARRFRDAANPLVSLRSPLPLMVAGIGVALLVIAAVTLPPRPPAPDVNQTRNLSDAEALAIVAHDMRTADAAARVMSDGQTRFDDGTWYISVSGAHFHFTQRNRIVVAEDPPAIQLQFTSP
Ga0066710_1006926013	3300009012	Grasslands Soil	AGIGATILVIAVVTLPPRPTPPDATQTANLGDSEALTLVAHEMRSGDAAARVLNDGQVRFNDGTWYISVGGAHFHFTQRNRIVVADDQPAIDLQYRSVASGQ
Ga0066710_1009037941	3300009012	Grasslands Soil	MVAGVGVAILVIAVVTLPPRAAAPDPTQAATLSEAEVKTLVAHEMRSGDAAARVLAEGQVQFDDGTWYISVGGGHFHFSQRNRIVVADDPPAIQLQYAD
Ga0066710_1009089031	3300009012	Grasslands Soil	VRAVANPLVSLRSPVPLIVAGIGVAILVIAVVTLPPRPATPDPAQTPTLDDSEVLALVAHEMRSADAAARVLSDSQVRFQDGSWYISVGPAHFHLSNRNRI
Ga0099827_107923152	3300009090	Vadose Zone Soil	MVAGVGVAILVIAVVTLPPRPPAPDPAQTATLSEGEVKALVAHEMRSGDAAERVLAEGQVRFDDGTWYISVGGGHFHFSQRNRIVVADDPPAIQLQNAAAR*
Ga0066709_1003932452	3300009137	Grasslands Soil	MLGAEAPRRPGRRLRDTANPLVSLRSPLPLMVAGVGVAILVIAVVTLPPRAAAPDPTQAATLSEAEVKTLVAHEMRSGDAAARVLAEGQVRFDDGTWYISVGGGHFHFSQRNRIVVADDPPAVQLQYAAAAR*
Ga0066709_1026340202	3300009137	Grasslands Soil	MLGADIPRRSARRFRDAANPLVSLRSPLPLMVAGIGVALLVIAAVTLPPRPPAPDVNQTRNLSDAEALAIVAHDMRTADAAARVMSDGQTRFDDGTWYISVSGAHFHFTQRNRIVVAEDPPAIQLQFTSP*
Ga0126376_128691811	3300010359	Tropical Forest Soil	WRQRRAIEVDRANKRRSSGYSDHREMLGADAPRRSRRIRDTNPLVSLRSPLPLLVAGVGVAILVIAVVTLPPRPAPPDPLEQAMLSEGEVRTLVAHDMRSSSAAARVMGESQVRFDDGTWYVSVGNAHFQFSQRNRIVVADDPPAVQLQYGT*
Ga0126377_102280783	3300010362	Tropical Forest Soil	MIGTRPGRHVANPLVSLRSPLPLIVAGIGVTLLVIAAVTLPPRPAPEPVQTASLSDAEALTIVAHDMRSPDGAARVMTDGQARFDDGTWYISVGPAHFHFTQRNRIVVAEDQPAIQLEYGG*
Ga0126381_1022938621	3300010376	Tropical Forest Soil	MIGSRSSGRSISNPLVSLRSPVPLIVAGIGVALLVIAAVTLPPRPAPEPAQTANLSDAEALTIVAHDMRSADAAEKVMSTGQASFNDGTWYIVVGPANFHFTQRNRIVVADNQAAVQLQYAT*
Ga0137392_110559572	3300011269	Vadose Zone Soil	MLGAEAPRRPGRRFRDAAHPLVSLRSPLPLMVAGIGVAILVIAVVTLPPRPAPPDPTQAEMLSHSEVLSLVAHEMRSGDAASRVITQGEVRFDDGTWFISVGGAHFHFSQRNRIVVADDPPAIQLQFS*
Ga0137391_103407102	3300011270	Vadose Zone Soil	MLGAEAPRRPGNRFRDAAHPFVSLRSPLPLMVAGIGVALLVIAAFTLPPRQAPEPTQTASLSEAEALTLVAHEMRSGQAAARVLTDGQTRFDNGTWYVSVGGAHFRFTQRNRIVVAEDALAVQLEYGS*
Ga0137393_115969791	3300011271	Vadose Zone Soil	MVAGVGVAILVIAVVTLPPRPPAPDPTQTATLSEGEVKALVAHEMRSGDAAARVLAEGQVRFDDGTWYISVGGGHFHFSQRNRIVVADDPPAIQLQNAAAR*
Ga0137389_114833711	3300012096	Vadose Zone Soil	PLPLMVAGVGVAILVIAVVTLPPRPPAPDPTQAATLSDGEVKALVAHEMRSGDAAARVLAEGQVRFDDGTWYISVGGGHFHFSQRNRIVVADDPPAIQLQNAAAR*
Ga0137365_104317862	3300012201	Vadose Zone Soil	MLGADARRSGRQFRDAAHPLVSLRSPLPLMVAGIGVTLLVIAAVTLPPRPAPEPTQTANLSDAEALTIVAHDMRSTTAAERVMTEGQTHFEDGSWYVSVGGAHFHFTQRNRIVVADDPPAIQLEYAP*
Ga0137379_104822871	3300012209	Vadose Zone Soil	DAARPLVSLRSPLPLMVAGIGATILVIAVVTLPPRPAPPDATQTANLGDSEALTLVAHEMRSGDAAARVLNDGQVRFNDGTWYISVGGAHFHFTQRNRIVVADDQPAIDLQYRSVASGQ*
Ga0137379_106532262	3300012209	Vadose Zone Soil	VSLRSPLPLMVAAIGVTLLVVAAVTLPPRPTPEATQTANLSDAEALTIVAHEMRSGDSAARVMSEGQTRFDDGTWYISVGGAHFHFTQRNRIVVAEDTPAVQLEYRNP*
Ga0137378_114131491	3300012210	Vadose Zone Soil	VSLRSPLPLMVAAIGVTLLVVATVTLPPRPTPEATQTANLSDAEALTIVAHEMRSGDSAARVMSEGQTRFDDGTWYISVGGAHFHFTQRNRIVVAE
Ga0150985_1137356733	3300012212	Avena Fatua Rhizosphere	LRSPVPLIVAGIGVALLVIAAVTLPPRPAPEPAQTANLSEAEALTIVAHDMRSADAAQTVMTQGHASFDDGTWYVTSGPAHFHFTQRNRIVVPDDQAAIQLEYAT*
Ga0150985_1228300492	3300012212	Avena Fatua Rhizosphere	THSGRGVASPLVSLRSPLPLIVAGIGVTLLVIAVVALPARPAPEPPQTASLSEAEALTIVAHDMRSSDAAARVMTDGQASFVDGTWNIKVGPAHFHFSQRNRIVVGEDPPAIQLQYGGT*
Ga0137371_104795892	3300012356	Vadose Zone Soil	MLGADAPRRPGRRFREAAHPLVSLRSPLPLMVSGIGVALLVIAAVTLPPRPAAPETQTENLSDAEALTIVAHDMRGSDSAARVMSEGRTRFDDGTWYINVGGAHFHFTQRNRIVVADDPPAIQLEYAP*
Ga0137385_107734972	3300012359	Vadose Zone Soil	VSLRSPLPLMVAAIGVTLLVVATVTLPPRPTPEATQTANLSDAEALTIVAHEMRSGDSAARVMSEGQTRFDDGTWYISVGGAHFHFTQRNRIVVAEDTPAVQLEYRNP*
Ga0137385_112735221	3300012359	Vadose Zone Soil	LRSPLPLMVAGVGVAILVIAVVTLPPRPAAPDPTQTATLSEAEVKTLVAHEMRSGDAATRVLAEGQVRFEDGTWYISVGGSHFHFSQRNRIVVADDPPAIQLQYAAGR*
Ga0137390_101924622	3300012363	Vadose Zone Soil	MVAGVGVAILVIAVVTLPPRPPAPDPAQTATLSEGEVKALVAHEMRSGDAAARVLAEGQVRFDDGTWYISVGGGHFHFSQRNRIVVADDPPAIQLQNAAAR*
Ga0150984_1023683001	3300012469	Avena Fatua Rhizosphere	RGRRFRDANPLVSLRSPLPLMVAGVGAAILLIAVVTLKPQPGAPDPTQTAMLSEAEVRSIVAHEMRSGDAAARVINDSQVHFDDGTWSVSVGGAHFHFSQRNRIVVPDDPAAVQLQYGSTSP*
Ga0126369_123896632	3300012971	Tropical Forest Soil	MLGADAPRRSRRIRDTNPLVSLRSPLPLLVAGVGVAILVIAVVTLPPRPAPPDPLQQAMLSEGEVRTLVAHDMRSSSAAARVMGESQVRFDDGTWYVSVGNANFHFSQRNRIVVADDPPAVQLQYGT*
Ga0157375_118946622	3300013308	Miscanthus Rhizosphere	MLGAEAPRRSRRVRDTNPLVSLRSPLPLLVAGVGVAILVIAMVTLPPRPAPPDPAQQALLSEAEVRTLVAHDMRSSSSAERVMNESQVRFDDGTWYVSVGNAHFHFSQRNR
Ga0120158_102123073	3300013772	Permafrost	VAGIGATILVIAVVTLPPRPAPPDPTQTANLGDSEALTLVALEMRSGAAAARVLNEGQVRFNDGTWYISVSGAHFHFTQRNRIIVADDPPAIDLQYGTVVSGQ*
Ga0120109_10871011	3300014052	Permafrost	MRDAARPLVSLRSPLPLMVAGIGATILVIAVVTLPPRPAPPDPTQTANLGDSEALTLVAHDMRSGDAAARVLNEGQVRFNDGTWYISVSGAHFHFTQRNRIIVA
Ga0157379_124454841	3300014968	Switchgrass Rhizosphere	MRDAARPLVSLRSPLPLMVAGIGVTVLVIAVVTLPPRPAPPDPSQTATLGDAEALTLVAHEMRSGEAAARVLSDGQVRFDDGTWYVSVGGAHFHFTQRNRIVVADD
Ga0182033_119542972	3300016319	Soil	MLNARSRRHVPLVSLRSPLPLMVAGIGVTLLVIALATLPFRPPPEPVQTATLSESEALTIVAQEMRSGPAAAKVMTDGVTRFNDGTWYINVDDAHFHFSQRNRIVVAEDPPAVKLMYISA
Ga0066662_112507502	3300018468	Grasslands Soil	MVAGIGVALLVIAAVTLPPRPTAPEPQAANLSEAEALTLVAHDMRSADSAARVLSDGHTRFEDGTWYIDVGPAHFHFTQRNRIVVAEDPPAMQLQYGQAAPRGG
Ga0193751_11985561	3300019888	Soil	MRDAARPLVSLRSPLPLMVAGIGATILVIAVVTLPPRPAPPDPTQTANLGDSEALTLVAHEMRSGAAAARVLNEGQVRFNDGTWYISVGGAHFHFTQRNRIIVADDPQGIDLEYQ
Ga0213882_100042607	3300021362	Exposed Rock	MIGARPGRRVSNPLVSLRSPLPLIVAGVGVTLLVIALVTLPPRPAPEPPQTATLSDSEALTIVAHDMRSADAAARVMTDGQARFDDGTWYVNVGPAHFHFTQRNRIVVAEDQLAIQLEYS
Ga0213874_104068971	3300021377	Plant Roots	MLSSARSRRQVPLVSLRSPLPLMVAGIGVTLLVIALATLPFRAQPEPVQTPTLSDSEALTIVAQQVRSSAAAQKVMTDGQTRFNDGTWYINVGNAHFHFSQRNRLVVAEDDQAIQLEYGGTP
Ga0213876_100076333	3300021384	Plant Roots	MLSSARSRRQVPLVSLRSPLPLMVAGIGVTLLVIALATLPFRAQPEPVQTPTLSDSEALTIVAQQVRSSAAAQKVMTDGQTRFNDGTWYINVGNAHFHFSQRNRLVVAEDDQAIQLEYGGGTS
Ga0213875_100533973	3300021388	Plant Roots	VAVNLTECCTRVGALVLQLAQMLSSARSRRQVPLVSLRSPLPLMVAGIGVTLLVIALATLPFRAQPEPVQTPTLSDSEALTIVAQQVRSSAAAQKVMTDGQTRFNDGTWYINVGNAHFHFSQRNRLVVAEDDQAIQLEYGGGTS
Ga0213875_104014671	3300021388	Plant Roots	MLGTEARRPGRQLRDRPLVSLRSPLPLIAAGIGVTLLVIAAVTLPARPQPEPVQTANISEAEALTLVAHDMRSATAAQRVMDEGQTRFDDGTWYVSVGGAQFHFSQRNRIVVAENDAAIQLEYS
Ga0213875_106449881	3300021388	Plant Roots	MIGTRPGRRVANPLVSLRSPLPLIVAGVGVTLLVIAVVTLPPRPAPESPQTATLSDAEALTIVAHDMRSADAAQKVMTQGQARFDDGTWYVTVGPADFHFTQRNRIVVAEDPPAIQLEYG
Ga0207684_107597872	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRDAARPLVSLRSPLPLMVAGIGATILVIAVVTLPPRPTPPDATQTANLGDSEALTLVAHEMRSGDAAARVLNDGQVRFNDGTWYISVGGAHFHFTQRNRIVVADDQPAIDLQYRSVASG
Ga0207646_104558951	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	PLIVAGIGVTLLVIAVVTLPPRPTPESAQTPNISREEALTIVAHDMRSASAAAQVMNEGVATFNDGSWSIGVGNAHFHFTQRNRIVVADDPPAVQLQYNP
Ga0207700_115491992	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	ALLVIALATLPFRPPPEAPQQATLSDAEALTIVAHEMRSGTAAARVMNNGQTRFDDGTWYITVDGAHFHFSQRNRIVVAEDQPAIELEYQG
Ga0207640_106827922	3300025981	Corn Rhizosphere	MVGADVPRQAPRRVRSAAHPLVSLRSPFPLMVAAAGVTILVIALATLPGRPAPGDPSQTATLSEAEVKTLVAQEMRSGDAAARVLTDAQVRFDDGTWYITVGGAHFHFSQRNRIVVADDPLAVQLQYRSTP
Ga0209059_12014182	3300026527	Soil	AMLGADAPRRSGRRFREAAHPLVSLRSPLPLMVAGIGVALLVIAAVTLPPRPTAPETQAANLSEAEALTIVAHDMRSSDSAARVMSDGHTRFEDGTWYINVGPAHFHFTQRNRIVVADDPPAIQLEYTP
Ga0209474_101134752	3300026550	Soil	MVAGIGVALLVIAAVTLPPRPTAPEPQAANLSEAEALTLVAHDMRSADSAARVLSDGHTRFEDGTWYIDVGPAHFHFTQRNRIVVAEDPPAMQLQYGQASPPQGG
Ga0209577_103485151	3300026552	Soil	MVAGIGVALLVIAAVTLPPRPTAPETQAANVSEAEALTIVAHDMRSSDSAARVMSDGHTRFEDGTWYINVGPAHFHFTQRNRIVVAEDPPAVQLQYGQAS
Ga0209577_104132632	3300026552	Soil	MRAMANPLVSLRSPVPLIVAGIGIAILVIAVVTLPPRPAAPDPAQTPTLDDSEVLALVAHEMRSADAAARVFSDGQVRFQDGSWYISVGPAHFHLSNRNRIVVADDPPAIQLQYRSGP
Ga0209580_100476932	3300027842	Surface Soil	MLGAEAPRRAGRQFRDSPLVSLRSPLPLIVAGIGVTLLVIAAVTLPPRPQPEPAQTANISDAEALTLVAHDMRSAQAAQRVMDEGQTRFNDGTWYISVGGAQFHFTQRNRIVVAENDAAVQLEYAP
Ga0209580_102874331	3300027842	Surface Soil	VPLIVAGVGLTLLVIAAVTLPPRPQPEPTQTANLSEAEALTLVAHDMRAAPAAQRIMNEGQARFDDGTWYISVGGAHFHFTQRNRIIVAEDPPAVQLEYSD
Ga0209166_100107957	3300027857	Surface Soil	MLGARSRRQVPLVSLRSPVPLIVAGIGVTLLVIAVATLPFRPQPEPVQTATLSDGEALTIVAQQMRSGPAATRVMTDGQTRFNDGTWYISVGNAHFHFSQRNRLVVAEDQPAVDLEYTDPSH
Ga0209166_100551992	3300027857	Surface Soil	MLGAEAPRRSSGRRVRAVANPLVSLRSPVPLIVAGIGVAILVIAVVTLPPRPAAPDPTQAPTLGDNEVLSLVAHEMRSGDAAARVMNEGQVLWADGTWQVSVGGAHFHLTNRNRIVVADDPPAIQLEYRS
Ga0209166_101642631	3300027857	Surface Soil	MRDAARPLVSLRSPLPLIVAGIGITVLVIAVVTLPPRPAPPDPSQTANLGDSEALTLVAHEMRSGESAARVMNAGEARFNDGTWYISVGGAHFHFTQRNRIVVADDPPAIDLQYR
Ga0209166_102058722	3300027857	Surface Soil	ARRMRDATRPLVSLRSPLPLMVAGIGIAVLVIAVVTLPPRPAPPDPSQTANLGDTEALTIVAHEMRSGDAAARVLQDGQVRFNDGTWYVSVGGAHYHFTQRNRIVVADDQPAIDMQYR
Ga0137415_107804532	3300028536	Vadose Zone Soil	MVAGIGVALLVIAAVTLPPRPPAPDVNQTRNISDAEALAIVAHDMRTADAAARVMSDGQTRFDDGTWYISVSGAHFHFTQRNRIVVAEDPPAIQLQFTNQ
Ga0137415_109280831	3300028536	Vadose Zone Soil	MLGAEAPRSSSSRRMRDAARPLVSLRSPLPLMVAGIGVTILVIALVTLPPRPAPPDPTQTANLGDSEALTLVAHEMRSGAAAARVLDEGQVRFNDGTWYVSVGGAHFH
Ga0272428_10171035	3300031520	Rock	MRDAARPLVSLRSPLPLMVAAIGVTILVIAIVTLPPRPNPPDASQTANLGDAEALTLVAREMRSGDAAARVLNDGQVRFNDGTWYVSVGGAHFHFTQRNRIIVADDQLAIDLQYR
Ga0318542_105777551	3300031668	Soil	MLNARSRRHVPLVSLRSPLPLMVAGIGVTLLVIALATLPFRPPPEPVQTATLSESEALTIVAQEMRSGPAAAKVMTDGVTRFNDGTWYINVDDAHFHFSQRNRIVVAEDPPAVRLMYI
Ga0306920_1021771582	3300032261	Soil	ARSRRHVPLVSLRSPLPLMVAGIGVTLLVIALATLPFRPPPEPVQTATLSESEALTIVAQEMRSGPAAAKVMTDGVTRFNDGTWYINVDDAHFHFSQRNRIVVAEDPPAVKLMYISAP
Ga0372943_0513765_137_493	3300034268	Soil	MRESTHPLVSLRSPLPLMVAAIGVTVLVIAVVTLPPRPAPPDPAQTATLADSEALTLVAHDMRSGDAAAQVLNQGQARFDDGTWYVNVSGAHFHFSQRNRIVVADDPPAIQLQYHASP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096938

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences