Basic Information | |
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Family ID | F096886 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 104 |
Average Sequence Length | 41 residues |
Representative Sequence | MKTILSALLALSVLAGIAAPASAFDSKTFWEQQDRSHY |
Number of Associated Samples | 73 |
Number of Associated Scaffolds | 104 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 0.96 % |
% of genes from short scaffolds (< 2000 bps) | 0.96 % |
Associated GOLD sequencing projects | 69 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.36 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (99.038 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (25.961 % of family members) |
Environment Ontology (ENVO) | Unclassified (50.000 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (66.346 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 51.52% β-sheet: 0.00% Coil/Unstructured: 48.48% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.36 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 104 Family Scaffolds |
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PF00300 | His_Phos_1 | 8.65 |
PF13531 | SBP_bac_11 | 3.85 |
PF01124 | MAPEG | 1.92 |
PF06897 | DUF1269 | 0.96 |
PF03092 | BT1 | 0.96 |
PF08592 | Anthrone_oxy | 0.96 |
PF13508 | Acetyltransf_7 | 0.96 |
PF12840 | HTH_20 | 0.96 |
PF01068 | DNA_ligase_A_M | 0.96 |
PF13490 | zf-HC2 | 0.96 |
PF03401 | TctC | 0.96 |
PF00582 | Usp | 0.96 |
PF13085 | Fer2_3 | 0.96 |
PF04392 | ABC_sub_bind | 0.96 |
PF01292 | Ni_hydr_CYTB | 0.96 |
PF00293 | NUDIX | 0.96 |
PF01734 | Patatin | 0.96 |
PF03167 | UDG | 0.96 |
PF00696 | AA_kinase | 0.96 |
PF14559 | TPR_19 | 0.96 |
PF13714 | PEP_mutase | 0.96 |
PF00067 | p450 | 0.96 |
PF00528 | BPD_transp_1 | 0.96 |
PF12852 | Cupin_6 | 0.96 |
COG ID | Name | Functional Category | % Frequency in 104 Family Scaffolds |
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COG0692 | Uracil-DNA glycosylase | Replication, recombination and repair [L] | 0.96 |
COG1423 | ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family | Replication, recombination and repair [L] | 0.96 |
COG1573 | Uracil-DNA glycosylase | Replication, recombination and repair [L] | 0.96 |
COG1752 | Predicted acylesterase/phospholipase RssA, containd patatin domain | General function prediction only [R] | 0.96 |
COG1793 | ATP-dependent DNA ligase | Replication, recombination and repair [L] | 0.96 |
COG1969 | Ni,Fe-hydrogenase I cytochrome b subunit | Energy production and conversion [C] | 0.96 |
COG2124 | Cytochrome P450 | Defense mechanisms [V] | 0.96 |
COG2864 | Cytochrome b subunit of formate dehydrogenase | Energy production and conversion [C] | 0.96 |
COG2984 | ABC-type uncharacterized transport system, periplasmic component | General function prediction only [R] | 0.96 |
COG3038 | Cytochrome b561 | Energy production and conversion [C] | 0.96 |
COG3181 | Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC | Energy production and conversion [C] | 0.96 |
COG3621 | Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR | General function prediction only [R] | 0.96 |
COG3658 | Cytochrome b subunit of Ni2+-dependent hydrogenase | Energy production and conversion [C] | 0.96 |
COG3663 | G:T/U-mismatch repair DNA glycosylase | Replication, recombination and repair [L] | 0.96 |
COG4117 | Thiosulfate reductase cytochrome b subunit | Inorganic ion transport and metabolism [P] | 0.96 |
COG4667 | Predicted phospholipase, patatin/cPLA2 family | Lipid transport and metabolism [I] | 0.96 |
COG4803 | Uncharacterized membrane protein | Function unknown [S] | 0.96 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 99.04 % |
All Organisms | root | All Organisms | 0.96 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300031879|Ga0306919_10112665 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 1934 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 25.96% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 14.42% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 10.58% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 9.62% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 7.69% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 4.81% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 4.81% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 3.85% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 1.92% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.92% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 1.92% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 1.92% |
Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 0.96% |
Sediment | Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment | 0.96% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.96% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 0.96% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 0.96% |
Untreated Peat Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil | 0.96% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 0.96% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 0.96% |
Rhizosphere Soil | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil | 0.96% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 0.96% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.96% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300000364 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
3300004268 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio | Environmental | Open in IMG/M |
3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Environmental | Open in IMG/M |
3300005713 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2) | Environmental | Open in IMG/M |
3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
3300006046 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101 | Environmental | Open in IMG/M |
3300006804 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 | Environmental | Open in IMG/M |
3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
3300006852 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Host-Associated | Open in IMG/M |
3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
3300006903 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5 | Host-Associated | Open in IMG/M |
3300009012 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159 | Environmental | Open in IMG/M |
3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009147 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) | Host-Associated | Open in IMG/M |
3300009792 | Tropical forest soil microbial communities from Panama - MetaG Plot_12 | Environmental | Open in IMG/M |
3300010043 | Tropical forest soil microbial communities from Panama - MetaG Plot_26 | Environmental | Open in IMG/M |
3300010046 | Tropical forest soil microbial communities from Panama - MetaG Plot_36 | Environmental | Open in IMG/M |
3300010047 | Tropical forest soil microbial communities from Panama - MetaG Plot_30 | Environmental | Open in IMG/M |
3300010358 | Tropical forest soil microbial communities from Panama - MetaG Plot_3 | Environmental | Open in IMG/M |
3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
3300010360 | Tropical forest soil microbial communities from Panama - MetaG Plot_6 | Environmental | Open in IMG/M |
3300010361 | Tropical forest soil microbial communities from Panama - MetaG Plot_23 | Environmental | Open in IMG/M |
3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
3300010376 | Tropical forest soil microbial communities from Panama - MetaG Plot_28 | Environmental | Open in IMG/M |
3300010937 | Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139 | Environmental | Open in IMG/M |
3300011120 | Combined assembly of Microbial Forest Soil metaT | Environmental | Open in IMG/M |
3300012948 | Tropical forest soil microbial communities from Panama - MetaG Plot_14 | Environmental | Open in IMG/M |
3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300016371 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 | Environmental | Open in IMG/M |
3300016445 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 | Environmental | Open in IMG/M |
3300017970 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG | Environmental | Open in IMG/M |
3300017974 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG | Environmental | Open in IMG/M |
3300018031 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1 | Environmental | Open in IMG/M |
3300019254 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300020579 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M | Environmental | Open in IMG/M |
3300021478 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M | Environmental | Open in IMG/M |
3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
3300022507 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300022508 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300022531 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300022726 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300027907 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) | Host-Associated | Open in IMG/M |
3300031184 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S | Environmental | Open in IMG/M |
3300031545 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26 | Environmental | Open in IMG/M |
3300031573 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111 | Environmental | Open in IMG/M |
3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
3300031744 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2) | Environmental | Open in IMG/M |
3300031770 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17 | Environmental | Open in IMG/M |
3300031854 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1 | Environmental | Open in IMG/M |
3300031879 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2) | Environmental | Open in IMG/M |
3300031890 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2) | Environmental | Open in IMG/M |
3300031908 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1 | Environmental | Open in IMG/M |
3300031910 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2) | Environmental | Open in IMG/M |
3300031912 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2) | Environmental | Open in IMG/M |
3300031945 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082 | Environmental | Open in IMG/M |
3300032001 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2) | Environmental | Open in IMG/M |
3300032059 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27 | Environmental | Open in IMG/M |
3300032174 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05 | Environmental | Open in IMG/M |
3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
3300032261 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2) | Environmental | Open in IMG/M |
3300034643 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300034819 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 | Host-Associated | Open in IMG/M |
3300034965 | Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_04D_17 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
INPhiseqgaiiFebDRAFT_1056889954 | 3300000364 | Soil | MQTLLSALLALTVLTGVAASASAFDSKTFFQEQDRARY* |
Ga0066398_101710442 | 3300004268 | Tropical Forest Soil | MIMKTILSALLALSVLAGIAAPASAFDSKTFWEQQDRSHY* |
Ga0062595_1025373692 | 3300004479 | Soil | PDMKIIVASALIALSLLTTIAAPARAFDSKEFWEQQDRLHY* |
Ga0062594_1002756282 | 3300005093 | Soil | MKIIVASALIALSLLTTIAAPARAFDSKEFWEQQDRLHY* |
Ga0066388_1035084981 | 3300005332 | Tropical Forest Soil | MKNIVKNIVPALIALSVLAGIVGSAAAFDTKTFYEQQDRSHF* |
Ga0066388_1049139561 | 3300005332 | Tropical Forest Soil | MKIIVAFALITLSLLTTTAAPASAFDSKEFWEQQDRLHY* |
Ga0070693_1001758952 | 3300005547 | Corn, Switchgrass And Miscanthus Rhizosphere | MKTIVKTIFASALIALSLLTTITAPASAFDSKQFWEQQDRSHY* |
Ga0066905_1000438534 | 3300005713 | Tropical Forest Soil | MKTILSALLALSVLAGIAAPASAFDSKTFWEQQDRSHY* |
Ga0066905_1004534461 | 3300005713 | Tropical Forest Soil | MQTIVKTIFASALIALSLLTTVAAPASAFDSKEFWEQQDRSHY* |
Ga0066905_1013503803 | 3300005713 | Tropical Forest Soil | LLSALLALSVLAGVTASAYAFDSKTFYQQQDREHY* |
Ga0066905_1020704721 | 3300005713 | Tropical Forest Soil | MKTLLSALLALTVLTGAAASASAFDSKTFYQEQDRSRY* |
Ga0066903_1000305424 | 3300005764 | Tropical Forest Soil | MKTLLSGLLALTILTGVAASATAFDSKTFYQDQDRSRY* |
Ga0066903_1007085963 | 3300005764 | Tropical Forest Soil | MKTILSTLLALSVLASIAAPASAFDSKTFWEQQDRSHY* |
Ga0066903_1012391123 | 3300005764 | Tropical Forest Soil | MKTLLSALLALTILTGVAASASAFDSKTFYQEQDRSRY* |
Ga0066903_1022761723 | 3300005764 | Tropical Forest Soil | MIMKAILAALIVVSAVAGAATSANAFDSKTFWEQQDRSHY* |
Ga0066903_1026126661 | 3300005764 | Tropical Forest Soil | MKTLLSALLALTVLTGVAASASAFDSKTFYQEQDRSRY* |
Ga0066903_1035903101 | 3300005764 | Tropical Forest Soil | TILSALLALSVLAGIAAPASAFDSKTFWEQQDRSHY* |
Ga0066903_1049322082 | 3300005764 | Tropical Forest Soil | MTMKTILSALLALSVLAGIAAPASAFDSKTFWEQQDRSHY* |
Ga0066903_1088305572 | 3300005764 | Tropical Forest Soil | ILSALLALSVLAGIAAPASAFDSKTFWEQQDRSHY* |
Ga0066652_1005201051 | 3300006046 | Soil | MKIIISMLIALSLFAGIAGPASAFDGKTFWEQQSRAAY* |
Ga0079221_109754532 | 3300006804 | Agricultural Soil | MQTIVKTIFASALIALSLLTTVAAPASAFDSKEFWDQQDRSHY* |
Ga0075428_1001169604 | 3300006844 | Populus Rhizosphere | MKTIVAAALITLSLLTTLAAPAGAFDSKEFWEQQDRLH |
Ga0075433_106207972 | 3300006852 | Populus Rhizosphere | MKIIVASALIALSLLTTIAAPASAFDSKEFWEQQDRLHY* |
Ga0075425_1000058928 | 3300006854 | Populus Rhizosphere | MQTLLSALLALTVLTGVAASASAFDSKTFFQEQDRSRY* |
Ga0075426_109135222 | 3300006903 | Populus Rhizosphere | MIMQTLLSALLALTVLTGVAASASAFDSKTFFQEQDRSRY* |
Ga0066710_1046376342 | 3300009012 | Grasslands Soil | MKTILSALLALSVLAGFAATASAELDAKSFYEHADRYRY |
Ga0111539_100976683 | 3300009094 | Populus Rhizosphere | MQTIVKTIFASALIALSLLTTVAAPASAFDSKQFWDQQDRSHY* |
Ga0114129_110779092 | 3300009147 | Populus Rhizosphere | MKTIVTALIALSVLAGIAAPASAEFDAKAFWEQQDRYSH* |
Ga0114129_115552812 | 3300009147 | Populus Rhizosphere | MQIIFSVLIALSVLTTIAAPASAAFDAKAFWEQQDRYRH* |
Ga0126374_114486532 | 3300009792 | Tropical Forest Soil | MIMKTLLSALLALTVLTGAAASASAFDSKTFYQEQDRSRY* |
Ga0126380_104738742 | 3300010043 | Tropical Forest Soil | MIMKTLLSALLALTVLTGVVASASAFDTKTFYQDQGRSRY* |
Ga0126380_117165811 | 3300010043 | Tropical Forest Soil | TTQIEKSRRMIMKAILAALIVVSALAGAATSASAFDSKTFWEQQDRSHY* |
Ga0126380_121933481 | 3300010043 | Tropical Forest Soil | MIMKTILSALLALSVLAGIAGPASAFDSKTFWEQQDRSH |
Ga0126384_100260711 | 3300010046 | Tropical Forest Soil | NTNTEEMIMKTILSALLALSVLAGIAAPASAFDSKTFWEQQDRSHY* |
Ga0126384_101554752 | 3300010046 | Tropical Forest Soil | MIMKTILSALLALSVLAGIAGPASAFDSKTFWEQQDRSHY* |
Ga0126384_120909621 | 3300010046 | Tropical Forest Soil | NTEEMIMKTILSALLALSVLAGIAAPASAFDSKTFWEQQDRSHY* |
Ga0126382_100338132 | 3300010047 | Tropical Forest Soil | MKTIVKTIVASALIALSLLTTIAAPASAFDSKEFWEQQDRSHY* |
Ga0126382_102693491 | 3300010047 | Tropical Forest Soil | MIMKTIVSALLALSVLAGIAAPASAFDSKTFWEQQDRSSY* |
Ga0126382_112375312 | 3300010047 | Tropical Forest Soil | MKIIVASALIAVSLLTTMTAPASAFDSKEFWEQQDRLHY* |
Ga0126370_101078492 | 3300010358 | Tropical Forest Soil | MKTIVSALIALSILGLVTAPASAFDSKTFWDQQDRSRY* |
Ga0126370_107531953 | 3300010358 | Tropical Forest Soil | LSALLALSVLAGIAAPASAFDSKTFWEQQDRSHY* |
Ga0126370_111369382 | 3300010358 | Tropical Forest Soil | MIMKTILSALLALAVLAGIAAPASAFDSKTFWEQQDHSHY* |
Ga0126370_123976021 | 3300010358 | Tropical Forest Soil | MIMKTLLSALLALAVLTGVAASASAFGAKTFYQDQDRSRY* |
Ga0126376_113577991 | 3300010359 | Tropical Forest Soil | MTMKTILSALLALSVLAGIAAPASAFDSKTFWEQQDRSSY* |
Ga0126372_120100722 | 3300010360 | Tropical Forest Soil | GRHDSKNTNTEEMIMKTILSALLALSVLAGIAAPASAFDSKTFWEQQDRSHY* |
Ga0126378_119728052 | 3300010361 | Tropical Forest Soil | MIMKTILWALLALSVLAGIAAPASAFDSKTFWEQQDRSHY* |
Ga0126377_100614323 | 3300010362 | Tropical Forest Soil | MKTIVASALIALSLLTTVAAPASAFDSKEFWEQQDRSHY* |
Ga0126377_110675791 | 3300010362 | Tropical Forest Soil | MKIIVASALIALSLLTTIAAPAGAFDSKEFWEQQDRSHY* |
Ga0126379_102016341 | 3300010366 | Tropical Forest Soil | MKTLLSALLALTVLTGVAASASAFDSKSFYQEQDRSRY* |
Ga0126379_105607821 | 3300010366 | Tropical Forest Soil | MTMKTILSALLALSVLAGIAAPARAFDSKTFWEQQDRSHY* |
Ga0126379_111614591 | 3300010366 | Tropical Forest Soil | MIMKTILSALLALSVLASIAAPASAFDSKTFWEQQDRSHY* |
Ga0126381_1040659971 | 3300010376 | Tropical Forest Soil | MIMKTILSALLALSVLAGIAAPASAFDSKPFWEQQDRSHY* |
Ga0137776_15440801 | 3300010937 | Sediment | MAGRHNSKNTNTEEIVMKMIISALLALSVLAGIAAPASAFDSKTFWEQQDRSHY* |
Ga0150983_109802591 | 3300011120 | Forest Soil | RRHNSKNRNTEEMIMKTILSALLALSVLVGIAAPASAFDSKTFWEQQDRSHY* |
Ga0126375_103882102 | 3300012948 | Tropical Forest Soil | MIMKTIRSALLALSVLAGIAAPASAFDSKTFWEQQDRSHY* |
Ga0126375_113610401 | 3300012948 | Tropical Forest Soil | MKTLLSALLALTVLTGVAVSASAFDSKTFYQEQDRSRY* |
Ga0126369_100978423 | 3300012971 | Tropical Forest Soil | MKTLLSALFALTILTGVAASASAFDSKTFYQEQDRSRY* |
Ga0132258_1000343821 | 3300015371 | Arabidopsis Rhizosphere | MKILIASALVALALIGAIAPPASAFDSKTFWEQQDRSHY* |
Ga0132258_1002009412 | 3300015371 | Arabidopsis Rhizosphere | MIMKTILSVLLALSVLAGIAAPASAFDSKTFWEQQDRSHY* |
Ga0132258_105224663 | 3300015371 | Arabidopsis Rhizosphere | MAGRHNSKNTNTEEIVMKMIISALLALSVLAGIAAPASAFDSKTFWEQQDRSHF* |
Ga0132258_125383443 | 3300015371 | Arabidopsis Rhizosphere | MKTIVNSIFASALIALSLLTTIAAPASAFDSKQFWEQQDRSHY* |
Ga0132256_1002717221 | 3300015372 | Arabidopsis Rhizosphere | AVVATARTNTEEMIMKTILSVLLALSVLAGIAAPASAFDSKTFWEQQDRSHY* |
Ga0132255_1013478452 | 3300015374 | Arabidopsis Rhizosphere | LEGDAVVATARTNTEEMIMKTILSVLLALSVLAGIAAPASAFDSKTFWEQQDRSHY* |
Ga0182034_102835771 | 3300016371 | Soil | MTMKTILSALLALSVLAGIAAPASAFDSKTFWEQQDRSHF |
Ga0182038_106518142 | 3300016445 | Soil | MKTILSALLALSVLAGIAAPASAFDSKTFREQQDRSHF |
Ga0187783_1000108221 | 3300017970 | Tropical Peatland | MKVLLSALLALSVLTGVAASASAFDSKSFFEQQDRSHY |
Ga0187783_103375912 | 3300017970 | Tropical Peatland | MKTLLSAVLALSVLTAFAASASAFDTKTFYEQQDRSHY |
Ga0187783_114155381 | 3300017970 | Tropical Peatland | TALSALVALTVLIAAAASASAFDSKTFYQEQDRSHY |
Ga0187777_106065961 | 3300017974 | Tropical Peatland | MKVLLSALLALSVLTGIAASASAFDSKTFYEQQDRAHY |
Ga0184634_101042723 | 3300018031 | Groundwater Sediment | MKTIASALIALSLLAVAAAPASAFDSKTYFQQLERNLP |
Ga0184641_11840261 | 3300019254 | Groundwater Sediment | MKTIISALIAISVIAGIAAPASAFDSKSLYDQLDRQSS |
Ga0210407_109465371 | 3300020579 | Soil | MIMQTLLSALLALTVLTGVAASASAFDSKTFFQEQDRSRY |
Ga0210402_100574864 | 3300021478 | Soil | MQTLLSALLALTVLTGVAASASAFDSKTFFQEQDRSRY |
Ga0126371_128592431 | 3300021560 | Tropical Forest Soil | KNTNTEEMIMKTILSALLALSVLAGIAAPASAFDSKTFWEQQDRSHY |
Ga0222729_10329931 | 3300022507 | Soil | RHNSKNRNTEEMIMKTILSALLALSVLAGIAAPASAFDSKTFWEQQDRSHY |
Ga0222728_10589572 | 3300022508 | Soil | HNSKNRNTEEMIMKTILSALLALSVLAGIAAPASAFDSKTFWEQQDRSHY |
Ga0242660_11197742 | 3300022531 | Soil | RRHNSKNRNTEEMIMKTILSALLALSVLAGIAAPASAFDSKTFWEQQDRSHY |
Ga0242654_100563261 | 3300022726 | Soil | MGTILSALLALSVLAGIAAPASAFDSKTFWEQQDRSHY |
Ga0207668_101031064 | 3300025972 | Switchgrass Rhizosphere | MKIIVASALIALSLLTTIAAPARAFDSKEFWEQQDRLHY |
Ga0207428_107816851 | 3300027907 | Populus Rhizosphere | MKILIASALVALALISAIAPPASAFDSKTFWEQQDRSHY |
Ga0307499_101141262 | 3300031184 | Soil | TMTTVKTIVASALIALSLLTTLAAPAGAFDSKAFWEQQDRLHN |
Ga0318541_101059683 | 3300031545 | Soil | MKTIVSALIALAVLGLVAPPASAFDSKSFWDRQDRSRY |
Ga0310915_101493252 | 3300031573 | Soil | MKTILSAFLALSVLAGVAAPASAFDSKTFWEQQDRSHF |
Ga0307469_103855432 | 3300031720 | Hardwood Forest Soil | MKIIVASGLIALSLLTTIAAPARAFDSKEFWEQQDRLHY |
Ga0307468_1000081997 | 3300031740 | Hardwood Forest Soil | MKTIVASALITLSLLTTLAAPAGAFDSKEFWEQQDRLHH |
Ga0306918_113265971 | 3300031744 | Soil | MKVLLSALLVLSVLTGVAASASAFDTKTFFEQQDRSHY |
Ga0318521_108497121 | 3300031770 | Soil | NTNTEEMMMKTILSALLALSVLAGIAAPASAFDSKTFWEQQDRSHY |
Ga0310904_108122931 | 3300031854 | Soil | MITIKTVVASALIALSLLTTLAAPAGAFDSKAFWEQQDRLHN |
Ga0306919_101126653 | 3300031879 | Soil | MMMKTILSALLALSVLAGIAAPASAFDSKTFWEQQDRSHY |
Ga0306925_103646961 | 3300031890 | Soil | MKTILSALLALSVLAGIAAPASAFDSKTFWEQQDRSHF |
Ga0310900_107540382 | 3300031908 | Soil | MKTIVKTIFASALIALSLLTTITAPASAFDSKQFWEQQDRSHY |
Ga0306923_113502092 | 3300031910 | Soil | MIMKTLLSALLALTVLAGVAASASAFDSKTFYQEQDRSRY |
Ga0306921_100532713 | 3300031912 | Soil | MKTLLSALLALTVLAGVAASASAFDSKTFYQEQDRSRY |
Ga0306921_120776511 | 3300031912 | Soil | MKTILSALLALTVLAGIAAPASAFDSKTFWEQQDRSHF |
Ga0310913_108326612 | 3300031945 | Soil | MIMKTLLSAFLALTVLAGVAASASAFDSKTFYQEQDRSRY |
Ga0306922_109066842 | 3300032001 | Soil | TPRGTIMKTLLCAIVALTVFSAAAVSATAFDSKTFYQEQDRSRY |
Ga0318533_114074411 | 3300032059 | Soil | EMMMKTILSALLALSVLAGIAAPASAFDSKTFWEQQDRSHY |
Ga0307470_101560502 | 3300032174 | Hardwood Forest Soil | MKTIVASTLITLSLLTTLAAPAGAFDSKEFWEQQDRLHY |
Ga0307471_1000137796 | 3300032180 | Hardwood Forest Soil | MKTIVASALITLSLLTTLAAPAGAFDSKEFWEQQDRSHY |
Ga0307472_1008222701 | 3300032205 | Hardwood Forest Soil | MKILIASALVALALIGAIAPPASAFDSKTFWEQQDRSHY |
Ga0306920_1002800624 | 3300032261 | Soil | MKTLLSAVLALAVLTGVAASAGAFDSKTFYEQQDRSRY |
Ga0370545_162366_41_163 | 3300034643 | Soil | MIMRTLLSALLALSFLTGVAASASAFDSKTFWEQQERQAQ |
Ga0373958_0172139_50_181 | 3300034819 | Rhizosphere Soil | MKTIVKTIFASALIALSLFTTITAPASAFDSKQFWEQQDRSHY |
Ga0370497_0203752_346_462 | 3300034965 | Untreated Peat Soil | MKIIASALIALSLIASIAAPASAFDARSFFESQQNVLP |
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