NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F096865

Metagenome Family F096865

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F096865
Family Type Metagenome
Number of Sequences 104
Average Sequence Length 55 residues
Representative Sequence MNKSTMTEASTNWDVYIKECMEVAASSITPYKIIPYAKYKGIKQAVVEKQIKEVA
Number of Associated Samples 72
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 75.96 %
% of genes near scaffold ends (potentially truncated) 24.04 %
% of genes from short scaffolds (< 2000 bps) 92.31 %
Associated GOLD sequencing projects 67
AlphaFold2 3D model prediction Yes
3D model pTM-score0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (94.231 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater
(20.192 % of family members)
Environment Ontology (ENVO) Unclassified
(77.885 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(69.231 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 25.30%    β-sheet: 0.00%    Coil/Unstructured: 74.70%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF03237Terminase_6N 1.92
PF06303MatP 0.96
PF137592OG-FeII_Oxy_5 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG3120Macrodomain Ter protein organizer, MatP/YcbG familyReplication, recombination and repair [L] 0.96


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A94.23 %
All OrganismsrootAll Organisms5.77 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002294|B570J29584_1008873Not Available640Open in IMG/M
3300002408|B570J29032_109431101Not Available759Open in IMG/M
3300002408|B570J29032_109437601Not Available764Open in IMG/M
3300002408|B570J29032_109496091Not Available810Open in IMG/M
3300004240|Ga0007787_10316621Not Available773Open in IMG/M
3300005517|Ga0070374_10606878Not Available543Open in IMG/M
3300005581|Ga0049081_10323104Not Available528Open in IMG/M
3300005583|Ga0049085_10114005Not Available926Open in IMG/M
3300005805|Ga0079957_1047818Not Available2645Open in IMG/M
3300006805|Ga0075464_10505291Not Available740Open in IMG/M
3300007734|Ga0104986_1723Not Available25950Open in IMG/M
3300008108|Ga0114341_10273953Not Available894Open in IMG/M
3300008117|Ga0114351_1368653Not Available632Open in IMG/M
3300008266|Ga0114363_1033449All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → SAR324 cluster → SAR324 cluster bacterium2151Open in IMG/M
3300008266|Ga0114363_1099993Not Available1045Open in IMG/M
3300008450|Ga0114880_1140937Not Available880Open in IMG/M
3300008450|Ga0114880_1173755Not Available751Open in IMG/M
3300009068|Ga0114973_10079481Not Available1885Open in IMG/M
3300009068|Ga0114973_10374673Not Available748Open in IMG/M
3300009068|Ga0114973_10439412Not Available680Open in IMG/M
3300009152|Ga0114980_10307821Not Available919Open in IMG/M
3300009152|Ga0114980_10649153Not Available594Open in IMG/M
3300009155|Ga0114968_10192279Not Available1187Open in IMG/M
3300009155|Ga0114968_10248359Not Available1012Open in IMG/M
3300009155|Ga0114968_10735028Not Available515Open in IMG/M
3300009158|Ga0114977_10526880Not Available644Open in IMG/M
3300009159|Ga0114978_10456305Not Available757Open in IMG/M
3300009163|Ga0114970_10563934Not Available615Open in IMG/M
3300009165|Ga0105102_10212536Not Available971Open in IMG/M
3300009187|Ga0114972_10126610Not Available1648Open in IMG/M
3300010885|Ga0133913_13431008Not Available1037Open in IMG/M
3300012666|Ga0157498_1063509Not Available568Open in IMG/M
3300012666|Ga0157498_1081252Not Available500Open in IMG/M
3300013004|Ga0164293_10160174Not Available1662Open in IMG/M
3300013004|Ga0164293_10426526Not Available888Open in IMG/M
3300013004|Ga0164293_10651257Not Available679Open in IMG/M
3300013005|Ga0164292_10539864Not Available760Open in IMG/M
3300013005|Ga0164292_11040471Not Available509Open in IMG/M
3300013372|Ga0177922_10700069Not Available1220Open in IMG/M
3300013372|Ga0177922_10885021Not Available621Open in IMG/M
3300017716|Ga0181350_1039811All Organisms → Viruses → Predicted Viral1273Open in IMG/M
3300017722|Ga0181347_1033066All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM24-C1651606Open in IMG/M
3300017722|Ga0181347_1037146Not Available1502Open in IMG/M
3300017736|Ga0181365_1043637Not Available1125Open in IMG/M
3300017747|Ga0181352_1069284Not Available999Open in IMG/M
3300017778|Ga0181349_1046090Not Available1720Open in IMG/M
3300017778|Ga0181349_1225455Not Available637Open in IMG/M
3300017778|Ga0181349_1315776Not Available503Open in IMG/M
3300017785|Ga0181355_1343357Not Available550Open in IMG/M
3300017788|Ga0169931_10272598Not Available1359Open in IMG/M
3300019784|Ga0181359_1101053Not Available1057Open in IMG/M
3300019784|Ga0181359_1118544Not Available949Open in IMG/M
3300019784|Ga0181359_1121293Not Available934Open in IMG/M
3300020159|Ga0211734_10265381Not Available856Open in IMG/M
3300020159|Ga0211734_10501734Not Available846Open in IMG/M
3300020160|Ga0211733_10458759Not Available1630Open in IMG/M
3300020161|Ga0211726_10494313Not Available1550Open in IMG/M
3300020172|Ga0211729_10992656Not Available771Open in IMG/M
3300020172|Ga0211729_11213662Not Available780Open in IMG/M
3300020172|Ga0211729_11267310Not Available616Open in IMG/M
3300020205|Ga0211731_10594592Not Available1112Open in IMG/M
3300020530|Ga0208235_1008415Not Available1350Open in IMG/M
3300022179|Ga0181353_1064475Not Available944Open in IMG/M
3300022190|Ga0181354_1125113Not Available823Open in IMG/M
3300022190|Ga0181354_1153424Not Available719Open in IMG/M
3300024346|Ga0244775_11231311Not Available582Open in IMG/M
3300027627|Ga0208942_1017924Not Available2303Open in IMG/M
3300027627|Ga0208942_1035189Not Available1579Open in IMG/M
3300027644|Ga0209356_1126801Not Available727Open in IMG/M
3300027721|Ga0209492_1205811Not Available675Open in IMG/M
3300027734|Ga0209087_1006394Not Available6259Open in IMG/M
3300027760|Ga0209598_10083494Not Available1541Open in IMG/M
3300027782|Ga0209500_10226959Not Available828Open in IMG/M
3300027782|Ga0209500_10265212Not Available742Open in IMG/M
3300027804|Ga0209358_10533302Not Available528Open in IMG/M
3300027963|Ga0209400_1144647Not Available1043Open in IMG/M
3300031707|Ga0315291_10327903All Organisms → Viruses → Predicted Viral1488Open in IMG/M
3300031772|Ga0315288_11004669Not Available742Open in IMG/M
3300031787|Ga0315900_10487844Not Available939Open in IMG/M
3300031857|Ga0315909_10366185Not Available1047Open in IMG/M
3300031951|Ga0315904_10334139Not Available1403Open in IMG/M
3300031963|Ga0315901_10728128Not Available730Open in IMG/M
3300031999|Ga0315274_11798260All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM24-C165562Open in IMG/M
3300031999|Ga0315274_12002683Not Available520Open in IMG/M
3300032053|Ga0315284_10364930Not Available1794Open in IMG/M
3300032092|Ga0315905_11186767Not Available625Open in IMG/M
3300032116|Ga0315903_10182173Not Available1888Open in IMG/M
3300032116|Ga0315903_11004990Not Available583Open in IMG/M
3300033996|Ga0334979_0141192Not Available1464Open in IMG/M
3300033996|Ga0334979_0184455Not Available1240Open in IMG/M
3300033996|Ga0334979_0471916Not Available683Open in IMG/M
3300034012|Ga0334986_0064433Not Available2279Open in IMG/M
3300034062|Ga0334995_0811562Not Available511Open in IMG/M
3300034073|Ga0310130_0233972Not Available576Open in IMG/M
3300034101|Ga0335027_0103657Not Available2165Open in IMG/M
3300034101|Ga0335027_0120069Not Available1973Open in IMG/M
3300034101|Ga0335027_0554098Not Available709Open in IMG/M
3300034101|Ga0335027_0714935Not Available592Open in IMG/M
3300034102|Ga0335029_0327408All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium955Open in IMG/M
3300034104|Ga0335031_0161998Not Available1540Open in IMG/M
3300034106|Ga0335036_0048504Not Available3258Open in IMG/M
3300034120|Ga0335056_0488635Not Available650Open in IMG/M
3300034283|Ga0335007_0810557Not Available507Open in IMG/M
3300034356|Ga0335048_0523224Not Available563Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater20.19%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake18.27%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake17.31%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater10.58%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater6.73%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment4.81%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater3.85%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic3.85%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton3.85%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.92%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake1.92%
Freshwater, Surface IceEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Surface Ice1.92%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater0.96%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake0.96%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous0.96%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine0.96%
Fracking WaterEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water0.96%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002294Freshwater microbial communities from Lake Mendota, WI - 17MAY2012 deep hole epilimnionEnvironmentalOpen in IMG/M
3300002408Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)EnvironmentalOpen in IMG/M
3300004240Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SNEnvironmentalOpen in IMG/M
3300005517Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)EnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300005583Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRFEnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300006805Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNAEnvironmentalOpen in IMG/M
3300007734Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015JanEnvironmentalOpen in IMG/M
3300008108Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NAEnvironmentalOpen in IMG/M
3300008117Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008266Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008450Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigsEnvironmentalOpen in IMG/M
3300009068Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaGEnvironmentalOpen in IMG/M
3300009152Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaGEnvironmentalOpen in IMG/M
3300009155Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaGEnvironmentalOpen in IMG/M
3300009158Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaGEnvironmentalOpen in IMG/M
3300009159Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaGEnvironmentalOpen in IMG/M
3300009163Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaGEnvironmentalOpen in IMG/M
3300009165Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015EnvironmentalOpen in IMG/M
3300009187Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaGEnvironmentalOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300012666Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Surface Ice version 2EnvironmentalOpen in IMG/M
3300013004Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaGEnvironmentalOpen in IMG/M
3300013005Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaGEnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300017716Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.DEnvironmentalOpen in IMG/M
3300017722Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017736Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.NEnvironmentalOpen in IMG/M
3300017747Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.NEnvironmentalOpen in IMG/M
3300017778Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017785Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300017788Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20LEnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020159Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1EnvironmentalOpen in IMG/M
3300020160Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1EnvironmentalOpen in IMG/M
3300020161Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1EnvironmentalOpen in IMG/M
3300020172Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1EnvironmentalOpen in IMG/M
3300020205Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1EnvironmentalOpen in IMG/M
3300020530Freshwater microbial communities from Lake Mendota, WI - 22OCT2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300022179Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.NEnvironmentalOpen in IMG/M
3300022190Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.NEnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300027627Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027644Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027721Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027734Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027760Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027782Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027804Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027963Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300031707Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20EnvironmentalOpen in IMG/M
3300031772Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20EnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300031963Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116EnvironmentalOpen in IMG/M
3300031999Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20EnvironmentalOpen in IMG/M
3300032053Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16EnvironmentalOpen in IMG/M
3300032092Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121EnvironmentalOpen in IMG/M
3300032116Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119EnvironmentalOpen in IMG/M
3300033996Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004EnvironmentalOpen in IMG/M
3300034012Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027EnvironmentalOpen in IMG/M
3300034062Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045EnvironmentalOpen in IMG/M
3300034073Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XLEnvironmentalOpen in IMG/M
3300034101Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107EnvironmentalOpen in IMG/M
3300034102Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112EnvironmentalOpen in IMG/M
3300034104Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120EnvironmentalOpen in IMG/M
3300034106Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131EnvironmentalOpen in IMG/M
3300034120Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2014-rr0172EnvironmentalOpen in IMG/M
3300034283Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061EnvironmentalOpen in IMG/M
3300034356Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
B570J29584_100887323300002294FreshwaterMIKKTMSEASTNWNIYIKECIEVAASSITPYKIIPYKKGIGIKEAVIEK
B570J29032_10943110113300002408FreshwaterMNKSTMTEASKNWDVYIKECQEVAASSITPYEIIPYKKYNGIKQAVVKKQNTFK
B570J29032_10943760133300002408FreshwaterMNKSTMTEASKNWNVYIKECQEVAASSITPYEIIPYKKYNGIKQAVVKKQN
B570J29032_10949609123300002408FreshwaterMNKSTMTEASKNWDVYIKECQEVAASSITPYEIIPYKKYNGIKQAVVKKQN
Ga0007787_1031662123300004240Freshwater LakeMIKKTMSEASTNWNIYIKECIEVAASSITPYKIIPYKKGIGIKEAVIEKQIKAA*
Ga0070374_1060687823300005517Freshwater LakeMNKSTMSEASTNWNVYIYECKKVAATSITPYKIIPYKNGTGIKQAIVEKQTKEVV*
Ga0049081_1032310423300005581Freshwater LenticMNKSTMSEASKNWNVYIYECKKVAATSITPYKIIPYKNGTGIKQAIVEKQTKEVA*
Ga0049085_1011400513300005583Freshwater LenticMNKSTMTEASKNWDVYIKECMEVAASSITPYKIIPYAKYKGIKQAIVEKQNKEVL*
Ga0079957_104781883300005805LakeMLNQKTVDIASVDWDVYIKECLEVAATSLTPYKIIPYKNGKGIKQAIVEKQIKEVA*
Ga0075464_1050529123300006805AqueousMNKSTMTEASTNWDVYIKECLEVAASSITPYKIIPYKNYKGIKQAVVEKQVKKVA*
Ga0104986_172363300007734FreshwaterMNREMLSEASTNWDVYIKECLEVATSSITPYKIIPYKNGKGIKQAIVEKQIKEVA*
Ga0114341_1027395323300008108Freshwater, PlanktonMLNQKTADIASVDWDVYIKECLEVAATSLTPYKIIPYKNGKGIKQAIVEKQIKEVA*
Ga0114351_136865323300008117Freshwater, PlanktonMIKKTMSEASTNWNIYIKECIEVAASSITPYKIIPYKKGIGIKEAVIEKQSKAA*
Ga0114363_103344913300008266Freshwater, PlanktonMQREMLSEASKNWDIYIKECMQVAASSITPYKIIPYAKNKGIKQAVIEKQTKKAA*
Ga0114363_109999313300008266Freshwater, PlanktonMKGYNMNKSTMNEASTNWNVYIYECKKVAASSITPYKIIPYKNGIGIKQAIVEKQIKEVA
Ga0114880_114093713300008450Freshwater LakeMKGYNMNKSTMTEASTNWDVYIKECQEVAASSITPYEIIPYKKYNGIKQAVVKKQ
Ga0114880_117375513300008450Freshwater LakeMKGYNMNKQTMSEAAQNWDVYIKECMEVAASSITPYKIIPYKKYNGIKQAIVEKQIKEVA
Ga0114973_1007948123300009068Freshwater LakeMIKKTMSEASTNWNIYIKECIEIAASSITPYKIITYKKGIGIKEAVIEKQSKAA*
Ga0114973_1037467323300009068Freshwater LakeMQREMLSEASKNWDVYIKECMDVAATSITPYKIIPYAKNKGIKQAVIEKQTKKAA*
Ga0114973_1043941233300009068Freshwater LakeMNKSTMTEASKNWYVYIKECMQVAASSITPYKIIPYAKYKGIKQAIVEKQAKEVL*
Ga0114980_1030782113300009152Freshwater LakeMNKSTMTEASTNWDVYIKECQEVAASSITPYEIIPYKKYNGIKQAVVKKQNTFKEALTN
Ga0114980_1064915313300009152Freshwater LakeMKGYNMNKSTMTEASKNWDVYIKECQEVAASSITPYEIIPYKKYNGIKQAVVKKQNTFKEALTN
Ga0114968_1019227933300009155Freshwater LakeMNKSTMTEASKNWDVYIKECMEVAASSITPYKIIPYAKYKGIKQAIVEKQAKEVL*
Ga0114968_1024835923300009155Freshwater LakeMNKSTMTEASKNWDVYIKECMQVAASSITPYKIIPYAKNKGIKQAVIEKQIKEVA*
Ga0114968_1073502813300009155Freshwater LakeMTEASTNWDVYIKECMQVAASSITPYKIIPYAKNKGIKQAVVEKQTKEVA*
Ga0114977_1052688023300009158Freshwater LakeMIKKTMSEASTNWNIYIKECIEVAASSITPYKIIPYKKSIGIKEAVIEKQSKAA*
Ga0114978_1045630533300009159Freshwater LakeMKGYNMNKSTMSEASTNWNVYIYECKKVAATSITPYKIIPYKNGTGIKQAIVEKQTKEVA
Ga0114970_1056393423300009163Freshwater LakeMNKSTMSEASTNWDVYLKECIEVAASSITPYKIIPYKKGVGIKEAVIEKQSKAA*
Ga0105102_1021253633300009165Freshwater SedimentMNKSTMTEASTNWDVYIKECMEVAASSITPYKIIPYAKYKGIKQAIVEKQTKEDL*
Ga0114972_1012661023300009187Freshwater LakeMIKKTMSEASTNWNIYIKECIEIAASSITPYKIIPYKKGIGIKEAVIEKQSKAA*
Ga0133913_1343100843300010885Freshwater LakeYNMNKSTMTEASKNWDVYIKECMQVAASSITPYKIIPYAKNKGIKQAVIEKQIKEVA*
Ga0157498_106350933300012666Freshwater, Surface IceMNKSTMTEASTNWDVYIKECMEVAASSITPYKIIPYAKNKGIKQAIVEKQTKKAA*
Ga0157498_108125213300012666Freshwater, Surface IceQTTKGYNMNKSTMTEASKNWDVYIKECLEVAASSITPYKIIPYKNYKGIKQAIVEKQTKEVA*
Ga0164293_1016017413300013004FreshwaterMQKEMLSEASKNWDVYIKECMDVAATSITPYKIIPYAKNKGIKQAVVEKQTKKAA*
Ga0164293_1042652613300013004FreshwaterMNKSTMSEASKNWKVYIKECMEVAATSITPYKIIPYVKYKGIKQAVIEKQSKTA*
Ga0164293_1065125713300013004FreshwaterMNKSTMTEASTNWDVYIKECMEVAASSITPYKIIPYAKYKGIKQAVIEKQTKEVA*
Ga0164292_1053986423300013005FreshwaterMQREMLSEASKNWDVYIKECMDVAATSITPYKIIPYAKNKGIKQA
Ga0164292_1104047113300013005FreshwaterMNKSTMTEASTNWDVYIKECMEVAASSITPYKIIPYAKNKGIKQA
Ga0177922_1070006923300013372FreshwaterMNKSTMTEASKNWDVYIKECLEVAASSITPYKIIPYKNYKGIKQAIVEKQTKEVA*
Ga0177922_1088502113300013372FreshwaterKGYNMNKSTMTEASTNWDVYIKECMQVAASSITPYKIIPYAKNKGIKQAVVEKQIKEVA*
Ga0181350_103981113300017716Freshwater LakeTTMKGYNMNKSTMTEASTNWNVYIYECKKVAATSITPYKIIPYKNGTGIKQAIVEKQIKEVA
Ga0181347_103306643300017722Freshwater LakeMQREMLSEASKNWDVYIKECMQVAASRITPYKIIPYAKNKGIKQAVVEKQIKEVA
Ga0181347_103714613300017722Freshwater LakeMNKSTMSEASTNWNVYIYECKKVAATSITPYKIIPYKNGTGIKQAIVEKQTKEVL
Ga0181365_104363713300017736Freshwater LakeMNKSTMTEASTNWDVYIKECMQVAASSITPYKIIPYKKYNGIKQAIIEKQFNEVA
Ga0181352_106928433300017747Freshwater LakeMLNQKTADIASIDWDVYIKECLEVAATSLTPYKIIPYKNGKGIKQAIIEKQIKEVA
Ga0181349_104609023300017778Freshwater LakeMNKSTMTEASTNWDVYIKECMQVAASSITPYKIIPYKKYNGIKQAIIEKQFKEVV
Ga0181349_122545513300017778Freshwater LakeMQREMLSEASKNWDVYIKECMQVAASSITPYKIIPYAKNKGIKQ
Ga0181349_131577623300017778Freshwater LakeMNKSTMSEASKNWNVYIYECKKVAATSITPYKIIPYKNGTGIKQA
Ga0181355_134335723300017785Freshwater LakeMNKSTMTEASKNWDVYIKECQEVAASSVTPYEIIPYKKYNGIKQAVVKKQNTFKEALTNE
Ga0169931_1027259813300017788FreshwaterMNKSTMSEASTNWNVYIKECMEVAALSKTPYKIIPYKNGKGIRQAIVEKQVKEVA
Ga0181359_110105333300019784Freshwater LakeMNKSTMTEASTNWDVYIKECMQVAASSITPYKIIPYAKNKGIKQAVVEKQIKEVA
Ga0181359_111854423300019784Freshwater LakeMNKSTMTEASTNWDVYIKECMQVAASSITPYKIIPYKKYNGIKQAIIEKQFKEVA
Ga0181359_112129313300019784Freshwater LakeMQREMLSEASKNWDVYIKECMQVAASSITPYKIIPYAKNKGIKQAVVEKQTKKAA
Ga0211734_1026538123300020159FreshwaterMQREMLSEASKNWDVYIKECMDVAATSITPYKIIPYAKNKGIKQAVVEKQTKKAA
Ga0211734_1050173423300020159FreshwaterMNKSTMTEASTNWDVYIKECMQVAASSITPYKIIPYKKYNGIKQAVVEKINKAA
Ga0211733_1045875923300020160FreshwaterMSEASKNWNVYIKECMEVAASSITPYKIIPYAKNKGIKQAIVEKLNKAA
Ga0211726_1049431323300020161FreshwaterMNKSTMNEASTNWDVYIKESMQVAASSITPYKIIPYKKYNGIKQAVVEKIIKAA
Ga0211729_1099265613300020172FreshwaterMNKSTMSEASTNWNVYIKECIQVAASSITPYKIIPYAKNKGIKQAIIEKQVKEVA
Ga0211729_1121366223300020172FreshwaterMNKSTMSEASTNWNVYIKECMDVAATSITPYKIIPYAKNKGIKQAVVEKQTKKAA
Ga0211729_1126731023300020172FreshwaterMNKSTMNEASTNWDIYIKECMQVAASSITPYKIIPYKKYNGIKQAVVEKIIKAA
Ga0211731_1059459213300020205FreshwaterMNKSTMSEASTNWNVYIKECMQVAASSITPYKIIPYAKNKGIKQAVIEKQVKEVA
Ga0208235_100841553300020530FreshwaterMIKKTMSEASTNWNIYIKECIEVAASSITPYKIIPYKKGIGIKEAVIEKQSKAA
Ga0181353_106447523300022179Freshwater LakeMQREMLSEASKNWDVYIKECMDVAATSITPYKIIPYAKNKGIKQAIVEKQTKKAA
Ga0181354_112511323300022190Freshwater LakeMNKSTMSEASKNWNVYIYECKKVAATSITPYKIIPYKNGTGIKQAIVEKQIKEVA
Ga0181354_115342413300022190Freshwater LakeMQREMLSEASKNWDVYIKECMQVAASSITPYKIIPYAKNKGIKQAVVEKQIKEVA
Ga0244775_1123131123300024346EstuarineMNKSTMTEASKNWDVYIKECLEVAASSITPYKIIPYKNYKGIKQAVIEKQIKEVA
Ga0208942_101792473300027627Freshwater LenticMNKSTMSEASKNWNVYIYECKKVAATSITPYKIIPYKNGTGIKQAIVEKQTKEVA
Ga0208942_103518913300027627Freshwater LenticMNKSTMTEASKNWDVYIKECMEVAASSITPYKIIPYAKYKGIKQAIVEKQNKEVL
Ga0209356_112680113300027644Freshwater LakeMNKSTMTEASTNWDVYIKECMQVAASSITPYKIIPYAKNKGIKQAVVEKQTKKAA
Ga0209492_120581113300027721Freshwater SedimentMNKSTMTEASKNWDVYIKECMEVAASSITPYKIIPYAKYKGIKQAIVEKQNKEV
Ga0209087_100639443300027734Freshwater LakeMSEASTNWNIYIKECIEVAASSITPYKIIPYKKSIGIKEAVIEKQSKAA
Ga0209598_1008349423300027760Freshwater LakeMIKKTMSEASTNWNIYIKECIEIAASSITPYKIIPYKKGIGIKEAVIEKQSKAA
Ga0209500_1022695923300027782Freshwater LakeMIKKTMSEASTNWNIYIKECIEVAASSITPYKIIPYKKSIGIKEAVIE
Ga0209500_1026521233300027782Freshwater LakeFYLFTLILLYPKWLSTTMKGYNMNKSTMSEASTNWNVYIYECKKVAATSITPYKIIPYKNGTGIKQAIVEKQTKEVA
Ga0209358_1053330213300027804Freshwater LakeMIKKTMSEASTNWNIYIKECIEVAASSITPYKIIPYKKGIGIKEAVIEKQIKAA
Ga0209400_114464743300027963Freshwater LakeMNKSTMTEASKNWDVYIKECMQVAASSITPYKIIPYAKNKGIKQAVIEKQIKEVA
Ga0315291_1032790353300031707SedimentMNKSTMTEASKNWDVYIKECQEVAASSITPYKIIPYKKGIGIKEAVIEKQSKAA
Ga0315288_1100466913300031772SedimentMNKSTMTEASTNWDVYIKECMEVAASSITPYKIIPYAKYKGIKQAIVEKQNKEVL
Ga0315900_1048784413300031787FreshwaterVNMLNQKTADIASVDWDVYIKECLEVAATSLTPYKIIPYKNGLGIKQAIVEKQIKEVA
Ga0315909_1036618553300031857FreshwaterMNKPTMSEAAQNWNVYIYECKKVAASSITPYKIIPYKNGLGIKQAIVEKQIKEVA
Ga0315904_1033413933300031951FreshwaterMNKPTMSEAAQNWNVYIYECKKVAASSITHYKIIPYKNGLGIKQAIVEKQIKEVA
Ga0315901_1072812813300031963FreshwaterMNKSTMTEASKNWDVYIKECQEVAASSITPYEIIPYKKYNGIKQAV
Ga0315274_1179826013300031999SedimentMNKSTMSEASTNWNVYIYECKKVAATSITPYKIIPYKNGTGIKQAVVEKQTKAA
Ga0315274_1200268323300031999SedimentMNKSTMTEASKNWNVYIKECMQVAASSITPYKIIPYAKYKGIKQAVIEKQIKEVA
Ga0315284_1036493023300032053SedimentMNKSTITEASKNWDVYIKECLKVAASSITPYKIIPYKNYKGIKQAIVEKQTKEVL
Ga0315905_1118676723300032092FreshwaterMNKSTMSEASKNWNVYIYECKKVAATSITPYKIIPYKNGTGIKQAIVEKQTKEVL
Ga0315903_1018217313300032116FreshwaterGVNMLNQKTADIASVDWDVYIKECLEVAATSLTPYKIIPYKNGKGIKQAIVEKQIKEVA
Ga0315903_1100499013300032116FreshwaterMKGYNMNKPTMSEAAQNWNVYIYECKKVAASSITPYKIIPYKNGLGIKQAIVEKQIKEVA
Ga0334979_0141192_819_9863300033996FreshwaterMQKEMLSEASKNWDVYIKECMDVAATSITPYKIIPYAKNKGIKQAVVEKQTKKAA
Ga0334979_0184455_375_5423300033996FreshwaterMQREMLSEASKNWDIYIKECMQVAASSITPYKIIPYAKNKGIKQAVVEKQIKEVA
Ga0334979_0471916_85_2673300033996FreshwaterMKGYNMNKSTMTEASTNWDVYIKECMEVAASSITPYKIIPYAKYKGIKQAVVEKQIKEVA
Ga0334986_0064433_1258_14253300034012FreshwaterMNKSTMTEASTNWDVYIKECMEVAASSITPYKIIPYAKYKGIKQAVVEKQTKEVA
Ga0334995_0811562_205_3903300034062FreshwaterMKGYNMNKSTMSEASKNWNVYIYECKKVAATSITPYKIIPYKNGTGIKQAIVEKQTTKEV
Ga0310130_0233972_91_2913300034073Fracking WaterMVIKQQMKGYNMNKPTMSEAAQNWNVYIYECKKVAASSITPYKIIPYKNGLGIKQAVVEKQIKEVV
Ga0335027_0103657_1060_12243300034101FreshwaterMNKSTISEASKNWKVYIKECMEVAASSITPYKIIPYVKYKGIKQAVIEKQSKTA
Ga0335027_0120069_80_2443300034101FreshwaterMIKKTMNEASTNWNIYIKECIEVAASSITPYKIIPYKKGIGIKEAVIEKQSKAA
Ga0335027_0554098_1_1623300034101FreshwaterMKGYNMNKSTMTEASKNWDVYIKECQEVAASSITPYEIIPYKKYNGIKQAVVKK
Ga0335027_0714935_1_1623300034101FreshwaterMNKSTMTEASKNWDVYIKECMEVAASSITPYKIIPYAKYKGIKQAIIEKQIKEV
Ga0335029_0327408_531_6983300034102FreshwaterMNKSTMTEASKNWNVYIKECLEVAATSLTPYKIIPYKNGKGIKQAIVEKQIKEVA
Ga0335031_0161998_1274_14563300034104FreshwaterMKGYNMNKSTMTEASTNWDVYIKECMEVAASSITPYKIIPYAKYKGIKQAVVEKQTKEVA
Ga0335036_0048504_1723_18903300034106FreshwaterMNKSTMTEASTNWDVYIKECMEVAASSITPYKIIPYAKYKGIKQAVVEKQIKEVA
Ga0335056_0488635_139_3063300034120FreshwaterMNKSTMTEASTNWDVYIKECMEVAASSITPYKIIPYAKNKGIKQAVVEKQTKKAA
Ga0335007_0810557_344_4963300034283FreshwaterMTEASKNWDVYIKECMEVAASSITPYKIIPYAKYKGIKQAIVEKQIKEVA
Ga0335048_0523224_3_1403300034356FreshwaterMNKSTMTKASTNWDVYIKECQEVASTSVTPYKIIPYKNNKGIKQAI


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