Metagenome / Metatranscriptome Family F096860

Basic Information
Family ID	F096860
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	43 residues
Representative Sequence	GPGIQAITGLAVAGSTLAGVGFTASPGGEQPVFWQSPVR
Number of Associated Samples	96
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.04 %
% of genes from short scaffolds (< 2000 bps)	94.23 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Most Common Taxonomy
Group	Bacteria (93.269 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.885 % of family members)
Environment Ontology (ENVO)	Unclassified (27.885 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.462 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 43.28% Coil/Unstructured: 56.72%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00795	CN_hydrolase	73.08
PF00155	Aminotran_1_2	6.73
PF14833	NAD_binding_11	1.92
PF01609	DDE_Tnp_1	0.96
PF05016	ParE_toxin	0.96
PF01850	PIN	0.96
PF02754	CCG	0.96
PF02537	CRCB	0.96
PF02604	PhdYeFM_antitox	0.96
PF00588	SpoU_methylase	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain	Translation, ribosomal structure and biogenesis [J]	0.96
COG0239	Fluoride ion exporter CrcB/FEX, affects chromosome condensation	Cell cycle control, cell division, chromosome partitioning [D]	0.96
COG0247	Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcF	Energy production and conversion [C]	0.96
COG0565	tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferase	Translation, ribosomal structure and biogenesis [J]	0.96
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	0.96
COG2048	Heterodisulfide reductase, subunit B	Energy production and conversion [C]	0.96
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.96
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.96
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.96
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.96
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.96
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.96
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.96
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.27 %
Unclassified	root	N/A	6.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.27 %
Unclassified	root	N/A	6.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.27 %
Unclassified	root	N/A	6.73 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	91.35 %
Unclassified	root	N/A	6.73 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	91.35 %
Unclassified	root	N/A	6.73 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	76.92 %
Unclassified	root	N/A	6.73 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	43.27 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	7.69 %
Unclassified	root	N/A	6.73 %
Nakamurellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales	0.96 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.96 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	43.27 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	6.73 %
Unclassified	root	N/A	6.73 %
Iamiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	0.96 %
Nakamurellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae	0.96 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.96 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	43.27 %
Unclassified	root	N/A	6.73 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.92 %
Aquihabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans	0.96 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.96 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.96 %
Nakamurella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella	0.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	43.27 %
Unclassified	root	N/A	6.73 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.92 %
Pseudonocardia nigra	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia nigra	0.96 %
unclassified Aquihabitans	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans	0.96 %
Nakamurella multipartita	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita	0.96 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	43.27 %
Unclassified	root	N/A	6.73 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.92 %
Aquihabitans sp. G128	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. G128	0.96 %
Pseudonocardia nigra	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia nigra	0.96 %
Nakamurella multipartita	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita	0.96 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100814040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	814	Open in IMG/M
3300005406\|Ga0070703_10542811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	529	Open in IMG/M
3300005436\|Ga0070713_101977969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	565	Open in IMG/M
3300005439\|Ga0070711_100406314	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300005529\|Ga0070741_10791782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	828	Open in IMG/M
3300005540\|Ga0066697_10745967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	534	Open in IMG/M
3300006028\|Ga0070717_11324348	Not Available	654	Open in IMG/M
3300006057\|Ga0075026_100651851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	624	Open in IMG/M
3300006806\|Ga0079220_10182123	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300009521\|Ga0116222_1253094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	760	Open in IMG/M
3300009525\|Ga0116220_10243351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	784	Open in IMG/M
3300009624\|Ga0116105_1162764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300009698\|Ga0116216_10708432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300010360\|Ga0126372_10779275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	944	Open in IMG/M
3300010379\|Ga0136449_102512158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	738	Open in IMG/M
3300010379\|Ga0136449_103613840	Not Available	586	Open in IMG/M
3300010397\|Ga0134124_10262039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1595	Open in IMG/M
3300010876\|Ga0126361_11135656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300010880\|Ga0126350_10429164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	862	Open in IMG/M
3300011120\|Ga0150983_13498683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	748	Open in IMG/M
3300012210\|Ga0137378_10693473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	929	Open in IMG/M
3300012924\|Ga0137413_10194559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1358	Open in IMG/M
3300012924\|Ga0137413_11666358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia nigra	523	Open in IMG/M
3300013102\|Ga0157371_10098415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2074	Open in IMG/M
3300013105\|Ga0157369_12525366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300015371\|Ga0132258_11577897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1657	Open in IMG/M
3300016294\|Ga0182041_11636277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300016341\|Ga0182035_10725783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	867	Open in IMG/M
3300016357\|Ga0182032_10984911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	720	Open in IMG/M
3300016422\|Ga0182039_10708058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	888	Open in IMG/M
3300017821\|Ga0187812_1046296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1473	Open in IMG/M
3300017821\|Ga0187812_1301862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300017924\|Ga0187820_1056392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1071	Open in IMG/M
3300017928\|Ga0187806_1033719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1521	Open in IMG/M
3300017943\|Ga0187819_10750122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300017975\|Ga0187782_11656970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300018007\|Ga0187805_10453556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300018037\|Ga0187883_10068142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1871	Open in IMG/M
3300018044\|Ga0187890_10163599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1271	Open in IMG/M
3300019787\|Ga0182031_1177437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1136	Open in IMG/M
3300019890\|Ga0193728_1185327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita	886	Open in IMG/M
3300020581\|Ga0210399_10721908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	818	Open in IMG/M
3300021086\|Ga0179596_10607078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300021178\|Ga0210408_11036275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300021401\|Ga0210393_11025388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	667	Open in IMG/M
3300021403\|Ga0210397_10978965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	656	Open in IMG/M
3300021407\|Ga0210383_10619530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	932	Open in IMG/M
3300021433\|Ga0210391_10207555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1540	Open in IMG/M
3300021474\|Ga0210390_10354029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1242	Open in IMG/M
3300025134\|Ga0207416_1081855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1214	Open in IMG/M
3300025412\|Ga0208194_1030792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	847	Open in IMG/M
3300025903\|Ga0207680_10569655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	809	Open in IMG/M
3300025916\|Ga0207663_10574815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	883	Open in IMG/M
3300027064\|Ga0208724_1006361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1094	Open in IMG/M
3300027696\|Ga0208696_1174296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	689	Open in IMG/M
3300027767\|Ga0209655_10060011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1267	Open in IMG/M
3300028047\|Ga0209526_10548957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	747	Open in IMG/M
3300028047\|Ga0209526_10956624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300028381\|Ga0268264_10629108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1060	Open in IMG/M
3300028782\|Ga0307306_10042061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1117	Open in IMG/M
3300028877\|Ga0302235_10410045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300029999\|Ga0311339_11382372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300030706\|Ga0310039_10353954	Not Available	547	Open in IMG/M
3300031231\|Ga0170824_124434739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	950	Open in IMG/M
3300031236\|Ga0302324_102940822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M
3300031573\|Ga0310915_11097705	Not Available	553	Open in IMG/M
3300031680\|Ga0318574_10172521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1236	Open in IMG/M
3300031680\|Ga0318574_10780321	Not Available	560	Open in IMG/M
3300031682\|Ga0318560_10026450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. G128	2705	Open in IMG/M
3300031708\|Ga0310686_110336017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300031713\|Ga0318496_10818853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	513	Open in IMG/M
3300031715\|Ga0307476_10611506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	808	Open in IMG/M
3300031724\|Ga0318500_10034133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2064	Open in IMG/M
3300031751\|Ga0318494_10290114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	942	Open in IMG/M
3300031771\|Ga0318546_10076754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2146	Open in IMG/M
3300031771\|Ga0318546_11223837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300031782\|Ga0318552_10703540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300031797\|Ga0318550_10358809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	706	Open in IMG/M
3300031805\|Ga0318497_10417172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	751	Open in IMG/M
3300031819\|Ga0318568_10640983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M
3300031823\|Ga0307478_11167733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300031832\|Ga0318499_10210264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	758	Open in IMG/M
3300031846\|Ga0318512_10211863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	950	Open in IMG/M
3300031846\|Ga0318512_10294205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	806	Open in IMG/M
3300031860\|Ga0318495_10449424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300031879\|Ga0306919_11102238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300031912\|Ga0306921_11149023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	867	Open in IMG/M
3300032009\|Ga0318563_10660018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300032060\|Ga0318505_10186371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	969	Open in IMG/M
3300032064\|Ga0318510_10079415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1217	Open in IMG/M
3300032065\|Ga0318513_10663714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300032076\|Ga0306924_10776433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1070	Open in IMG/M
3300032180\|Ga0307471_101027351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	991	Open in IMG/M
3300032515\|Ga0348332_13903512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	607	Open in IMG/M
3300032770\|Ga0335085_11174470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	817	Open in IMG/M
3300032783\|Ga0335079_11976275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300032892\|Ga0335081_11140636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	894	Open in IMG/M
3300032896\|Ga0335075_11226537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	648	Open in IMG/M
3300032897\|Ga0335071_10986706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	789	Open in IMG/M
3300032898\|Ga0335072_11328740	Not Available	627	Open in IMG/M
3300032954\|Ga0335083_10714222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	812	Open in IMG/M
3300033290\|Ga0318519_10592581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	673	Open in IMG/M
3300034124\|Ga0370483_0012877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2392	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.19%
Host-Associated	Host-Associated	4.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.73%
Aquatic	Environmental → Aquatic	13.46%
Plants	Host-Associated → Plants	4.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.88%
Freshwater	Environmental → Aquatic → Freshwater	11.54%
Peat	Environmental → Terrestrial → Peat	2.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.92%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.96%
Sediment	Environmental → Aquatic → Sediment	0.96%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.65%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.54%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.62%
Loam	Environmental → Terrestrial → Soil → Loam	9.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.92%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.46%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.65%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.81%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.92%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.96%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.88%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.73%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.73%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.88%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.92%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.92%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.96%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.96%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.96%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.96%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.96%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300025134	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG (SPAdes)	Environmental	Open in IMG/M
3300025412	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027064	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF003 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096860

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1008140402	3300002245	Forest Soil	VVWTSPGGSDWQAATPAGRGLTGTGIQAITGLDVFDRTVTGVGFTATPGGEQPVFWQSPVR*
Ga0070703_105428112	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	AAEPAGQGLTGPGIQAITGLAVAGSTLAGVGFTATPAGEQPVFWQSPIR*
Ga0070713_1019779692	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	GLGIQAITGLAAAGSTLTGVGFTASPVSEQPIFWQAPVR*
Ga0070711_1004063141	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	AAPGIQAITGLTVSGRTLTGVGFTATPSGEQLTLWQPPIG*
Ga0070741_107917823	3300005529	Surface Soil	PTGPGLAAPGIQAITGLAVSGRSLTGVGFTATPSGEQPTLWQFPIG*
Ga0066697_107459672	3300005540	Soil	PGIQAITGLAVAGSTLTGVGFTASPAGEQPVFWQAPVR*
Ga0070717_113243481	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	IQAITSLTASGNTLTGVGFSASPNAEQPVFWQAPLR*
Ga0075026_1006518511	3300006057	Watersheds	PTGQGLTGSGIQAITGLTVSGSTLAGVGFTASPAAEEPVFWQSPIR*
Ga0079220_101821231	3300006806	Agricultural Soil	LATPGIQAITGLTVSGRSLTGVGFTATPSGEQPTLWQFPVG*
Ga0116222_12530942	3300009521	Peatlands Soil	QAITGLTVSGRTLSGVGFTATPGGEQPVLWQSPVR*
Ga0116220_102433513	3300009525	Peatlands Soil	QAITGLTVSGRTLTGVGFTATPADEQPNLWQAPIR*
Ga0116105_11627642	3300009624	Peatland	AITGLALSGSTLTGVGFTASPAGEEPVFWQSPVR*
Ga0116216_107084321	3300009698	Peatlands Soil	QGLTGQGIQAITGLTVSGRTLSGVGFTATPGGEQPVLWQSPVR*
Ga0126372_107792752	3300010360	Tropical Forest Soil	QAITGLAAAGSTLTGVGFTASPAGEQPIFWQAPVR*
Ga0136449_1025121581	3300010379	Peatlands Soil	AFTPAGRGLTGPGIQAITGLTASETTLTGVSFIASQGGEDPVFWQSPIR*
Ga0136449_1036138403	3300010379	Peatlands Soil	QAITGLAVSDRTLTGVGFIATPAGEQPTLWQAPIR*
Ga0134124_102620391	3300010397	Terrestrial Soil	LGIQAITGLAAAGSTLTGVGFTASPVSEQPIFWQAPVR*
Ga0126361_111356561	3300010876	Boreal Forest Soil	GIQAITALSASGSVMIGVGFTASPASEEPVFWQYPLR*
Ga0126350_104291641	3300010880	Boreal Forest Soil	GGSDWQAATPAGRGLTGTGIQAITGLDVFDRTVTGVGFTATPGGEQPVFWQSPVR*
Ga0150983_134986831	3300011120	Forest Soil	TPTGQGLTGNGIQAITALDVFDRTLTGVGFTAAPGGEQPVFWQSPVR*
Ga0137378_106934732	3300012210	Vadose Zone Soil	PGIQAITGLAVAGSTVTGVGFTASPAGEQPVFWQAPVR*
Ga0137413_101945591	3300012924	Vadose Zone Soil	QAITGLAVAGSTLTGVGFTASPAGEQPVFWQAPVR*
Ga0137413_116663581	3300012924	Vadose Zone Soil	KGLTGPGIQAITGIAVAGSTVTGVGFTASPAGEQPVFWQAPVR*
Ga0157371_100984153	3300013102	Corn Rhizosphere	TGLGIQAITGLAAAGNTLTGVGFTASPVSEQPIFWQAPVR*
Ga0157369_125253662	3300013105	Corn Rhizosphere	GIQAITGLAAAGSTLTGVGFTASPVSEQPIFWQAPVR*
Ga0132258_115778971	3300015371	Arabidopsis Rhizosphere	PAGQGLTGPGIQAITGLAVAGSTVTGVGFTASPAGEQPVFWQAPVR*
Ga0182041_116362771	3300016294	Soil	TSPPGAGGSAWKAVTPAGQGLTGPGIQAITGLTVSGGTLSGVGFTATPGGEQPVFWQSPV
Ga0182035_107257831	3300016341	Soil	PAGQGLTGPGIQAITGLTVAGSTLAGVGFTASPGGEQPIFWQSPVR
Ga0182032_109849112	3300016357	Soil	AAEPAGQGLTGPGIQAITGLAVAGSTLAGVGFTASPGGEQPIFWQSPVR
Ga0182039_107080581	3300016422	Soil	PAGQGLTGPGIQAITGLAVAGSTLAGVGFTAAPAGEQPVFWQSPVR
Ga0187812_10462961	3300017821	Freshwater Sediment	GIQAITGLTVSGRTLSGVGFTAAPGGEQPVLWQSPVR
Ga0187812_13018621	3300017821	Freshwater Sediment	GIQAITGLTVAGRTLSGVGFTATPGGEQPVLWQSPVR
Ga0187820_10563922	3300017924	Freshwater Sediment	PGIQAITGLTATSSTLTGVGFTASPGGEDPVFWQSPIR
Ga0187806_10337191	3300017928	Freshwater Sediment	TGPGIQAITGLTVSGRTLSGVGFTATPGGEQPVLWQSPVR
Ga0187819_107501221	3300017943	Freshwater Sediment	PGIQAITSLTVSGSTLAGVGFTASPSGEQPVFWQSPIR
Ga0187782_116569701	3300017975	Tropical Peatland	GIQAITGLTATGTTLTGVGFVASQGGEDPVFWQLPIR
Ga0187805_104535561	3300018007	Freshwater Sediment	PGIQAITGLTVSGRTLSGVGFTAAPAGEQPVLWQSPVR
Ga0187883_100681425	3300018037	Peatland	GQGLTGPGIQAITALSASGSMMIGVGFTAAPASEEPVFWQSPVR
Ga0187883_102484272	3300018037	Peatland	WRTNSPSVTGLGGQGIQEITALTVSGSTLTGIGFAASPASETPTIWRSPIRN
Ga0187890_101635991	3300018044	Peatland	AWTAATPTGQGLTGPGIQAITSLALSGSTLTGVGYTASPAGEQPVFWQSPVR
Ga0182031_11774371	3300019787	Bog	GLTVTPTGQGLTGPGIQAITALSASGSMMIGVGFTATPASEEPVFWQSPVR
Ga0193728_11853271	3300019890	Soil	GIQAITGLTVSGRTLTGVGFTASPDGEQPTLWRFPAHPG
Ga0210399_107219081	3300020581	Soil	TSASGSAWQAATPTGQGLTGNGIQAITGLDVFDRTVTGVGFTAAPGGEQPVFWQSPVR
Ga0179596_106070781	3300021086	Vadose Zone Soil	GAGIQAITGLAVAGSTLAGVGFTASPAGEEPVFWQSPIR
Ga0210408_110362752	3300021178	Soil	LSGTGIQAITGLDVWDRTLTGVGFTATPGGEQPVFWQSPVR
Ga0210393_110253881	3300021401	Soil	NGSAWQAVTPTGQGLTGNGIQAITGLDVFDRTVTGVGFTAAPGGEQPVFWQSPVR
Ga0210397_109789652	3300021403	Soil	STYGSAWRATEPAGQGLTGPGIQAITGLAVAGSTLAGVGFAASPGGEQPVFWQSPVR
Ga0210383_106195302	3300021407	Soil	LTGTGIQAITGLDVWDRTLTGVGFTATPGGEQPVFWQSPVR
Ga0210391_102075553	3300021433	Soil	LTGNGVQAITGLDVFDRTVTGVGFTAAPGGEQPVFWQSPVR
Ga0210390_103540291	3300021474	Soil	TPTGQGLTGNGIQAITGLDVFDRTVTGVGFTAAPGGEQPVFWQSPVR
Ga0207416_10818553	3300025134	Iron-Sulfur Acid Spring	TPTGQGLTGTGIQALTGLDVFDRTVTGVGFTATPGGEQPVFWQSPVR
Ga0208194_10307923	3300025412	Peatland	TPAGPGLATPGVQAITGLAATGHGLTGVGFTATPAGEQPTLWNVPAS
Ga0207680_105696552	3300025903	Switchgrass Rhizosphere	GLGIQAITGLAAAGSTLTGVGFTASPVSEQPIFWQAPVR
Ga0207663_105748151	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	QAITGLAAAGSTLTGVGFTASPVSEQPIFWQAPVR
Ga0208724_10063613	3300027064	Forest Soil	GQGLSGTGIQAITGLDVWDRTLTGVGFTATPGGEQPVFWQSPVR
Ga0208696_11742961	3300027696	Peatlands Soil	IQAITGLTVSGRTLSGVGFTAAPGGEQPVLWQSPVR
Ga0209655_100600113	3300027767	Bog Forest Soil	GIQAITGLDVFDRTVTGVGFTAAPGGEQPVFWQSPVR
Ga0209526_105489572	3300028047	Forest Soil	GIQAITGLAVAGSTLTGVGFTASPAGEQPVFWQAPVR
Ga0209526_109566241	3300028047	Forest Soil	SAWQAVTPAGQGLTGTGIQAITGLDVFDRTVTGVGFTATPGGEQPVFWQSPVR
Ga0268264_106291081	3300028381	Switchgrass Rhizosphere	TGLGIQAITGLAAAGSTLTGVGFTASPVSEQPIFWQAPVR
Ga0307306_100420612	3300028782	Soil	VQAITGLAVAGSTLTGVGFTASPLGEQPIFWQAPVR
Ga0302235_104100452	3300028877	Palsa	AAWKAVTPAGEGLTGPGIQEITSLTASGNTLTGVGYTASPSTEQPVFWQSPIR
Ga0311339_113823721	3300029999	Palsa	WTSASGAAWKAVTPAGEGLTGPGIQEITSLTASGNTLTGVGYTASPSTEQPVFWQSPIR
Ga0310039_103539541	3300030706	Peatlands Soil	RRCLSGPGLASPGVQAITGLAVSGRTLAGVGFTATPAGEQPTLWQAPIR
Ga0170824_1244347392	3300031231	Forest Soil	FYFTFISPTGRGLTGPGVQAITALTASGTTLSGVGFIASQGGEDPVFWQSPIR
Ga0302324_1029408221	3300031236	Palsa	LQAITGLTASGGTLTGVGFSATPGGEQPLFWQSPAR
Ga0310915_110977051	3300031573	Soil	DGSSWRAAEPAGQGLTGPGIQAITGLAVAGSTLAGVGFTASPGGEQPVFWQSPVR
Ga0318574_101725213	3300031680	Soil	SWRAAEPAGQGLTGPGIQAITGLAVAGSTLAGVGFTASPGGEQPIFWQSPVR
Ga0318574_107803211	3300031680	Soil	VTAGQGLTGPGIQAITALAASGSTLAGVGFTASPAGEQPVFWQ
Ga0318560_100264504	3300031682	Soil	GPGIHAITGLAVAGSTLSGVGFTASPAGEQPVFWQAPVR
Ga0310686_1103360171	3300031708	Soil	QAITGLTATSSTLTGVGFIASQGGEDPVFWQSPIR
Ga0318496_108188532	3300031713	Soil	GPGRSAWTAATPTGQGLTGPGIQAITGLTASGRTLTGVGYTATPSGEQPIFWQSPIR
Ga0307476_106115062	3300031715	Hardwood Forest Soil	TGQGLSGTGIQAITGLDVWDRTLTGVGFTATPGGEQPVFWQSPVR
Ga0318500_100341333	3300031724	Soil	VRSGPALTTSGSTLTGVGFTASPGGEQPVFWQSPIR
Ga0318494_102901141	3300031751	Soil	PGIQAITGLAVAGSTLAGVGFTASPGGEQPIFWQSPVR
Ga0318546_100767543	3300031771	Soil	GLTGPGIQAITALAASGSTLAGVGFTASPAGEQPVFWQSPIR
Ga0318546_112238372	3300031771	Soil	AEPAGQGLTGPGIQAITGLAVAGSTLAGVGFTASPGGEQPIFWQSPVR
Ga0318552_107035401	3300031782	Soil	DRLLAAGQGLTGYGIQAITGLTVSGRTLSGVGFTATPGGEQPVLWQSPVR
Ga0318550_103588091	3300031797	Soil	IQAITGLDVSNRTLTGVGFTATPGGEQPVFWQSPVR
Ga0318497_104171722	3300031805	Soil	SGIQAITGLTVSGRTLSGVGFTATPGGEQPVLWQSPVR
Ga0318568_106409832	3300031819	Soil	IQAITALTAVGSTLAGVGFTASQSGEQPVFWQSPIR
Ga0307478_111677331	3300031823	Hardwood Forest Soil	SASGAAWQAATPTGQGLTGTGIQAITGLDVFDQTVTGVGFTATPGGEQPVFWQSPVR
Ga0318499_102102642	3300031832	Soil	WRAAEPAGQGLTGPGIQAITGLAVAGSTLAGVGFTASPGGEQPIFWQSPVR
Ga0318512_102118631	3300031846	Soil	PGIQAITGLTVSGGTLSGVGFTATPGGEQPVLWQSPVR
Ga0318512_102942052	3300031846	Soil	AITGLTVSGSTLTGVGFTASPAGEQPVYWQSPIRA
Ga0318495_104494242	3300031860	Soil	DEPSAEPAGQGLTGPGIQAITGLAVAGSTLAGVGFTASPGGEQPIFWQSPVR
Ga0306919_111022381	3300031879	Soil	GPGIQAITGLAVAGSTLAGVGFTASPGGEQPVFWQSPVR
Ga0306921_111490232	3300031912	Soil	DGSSWRAAEPAGQGLTGPGIQAITGLAVAGSTLAGVGFTASPGGEQPIFWQSPVR
Ga0318563_106600181	3300032009	Soil	LTGPGIQAITGLAVAGSTLAGVGFTASPGGEQPIFWQSPVR
Ga0318505_101863711	3300032060	Soil	TGPGIQAITGLTVSGGTLSGVGFTATPGGEQPVLWQSPVR
Ga0318510_100794153	3300032064	Soil	AVTPAGQGLTGPGIQAITALAASGSTLAGVGFTASPAGEQPVFWQSPIR
Ga0318513_106637141	3300032065	Soil	QAITALTAVGSTLAGVGFTASQSGEQPVFWQSPIR
Ga0306924_107764331	3300032076	Soil	AGQGLTGPGIQAITALAASGSTLAGVGFTASPAGEQPVFWQSPIR
Ga0307471_1010273511	3300032180	Hardwood Forest Soil	IQAITGLAAAGSTLTGVGFTASPVSEQPIFWQAPVR
Ga0348332_139035121	3300032515	Plant Litter	GGQGLTGLGIQAITGLTVSGSTLAGVGFTASSAGEEPVFWQSPIR
Ga0335085_111744701	3300032770	Soil	PGIQVITGLTVAGSTLAGVGFTASPGGEQPIFWQSPVR
Ga0335079_119762751	3300032783	Soil	GQGLTGPGIQAITSLATSGSTLTGIGFTASPSGEQPVFWQSPVR
Ga0335081_111406362	3300032892	Soil	EPAGQGLTGPGIQAITGLAVAGSTLAGVGFTASPAGEQPVFWQAPVR
Ga0335075_112265372	3300032896	Soil	WEAATPDGQGLTGTGIQAIVGLDVSGRFVSGVGFAATPGSEQPVFWQAPVR
Ga0335071_109867062	3300032897	Soil	QAITGLAISGSTLTGVGFTASPASEQPVFWQSPVR
Ga0335072_113287401	3300032898	Soil	GIQVITGLTVAGSTLAGVGFTAAPAAEQPIFWQSPIR
Ga0335083_107142221	3300032954	Soil	SAWRAAEPAGQGLTGPGIQVITGLTVAGSTLAGVGFTASPGGEQPIFWQSPVR
Ga0318519_105925812	3300033290	Soil	SGPGRSAWTAATPTGQGLTGPGIQAITGLTASGRTLTGVGYTATPSGEQPIFWQSPIR
Ga0370483_0012877_2_151	3300034124	Untreated Peat Soil	AVTPAGQGLTGPGIQAITALSASGSMMIGVGFTATPASEEPVFWQSPVR

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign