Metagenome / Metatranscriptome Family F096837

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096837
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	69 residues
Representative Sequence	VIAHYFHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKIQKSVLRLAYLVAIAGALLPFLNWGGGKG
Number of Associated Samples	63
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.92 %
% of genes near scaffold ends (potentially truncated)	97.12 %
% of genes from short scaffolds (< 2000 bps)	95.19 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (54.808 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (27.885 % of family members)
Environment Ontology (ENVO)	Unclassified (51.923 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.385 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 70.42% β-sheet: 0.00% Coil/Unstructured: 29.58%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF08734	GYD	3.85
PF13458	Peripla_BP_6	2.88
PF00501	AMP-binding	1.92
PF13610	DDE_Tnp_IS240	1.92
PF00890	FAD_binding_2	1.92
PF04234	CopC	1.92
PF01070	FMN_dh	1.92
PF01925	TauE	0.96
PF01124	MAPEG	0.96
PF02627	CMD	0.96
PF04392	ABC_sub_bind	0.96
PF05368	NmrA	0.96
PF01979	Amidohydro_1	0.96
PF00440	TetR_N	0.96
PF13701	DDE_Tnp_1_4	0.96
PF00654	Voltage_CLC	0.96
PF12543	DUF3738	0.96
PF01904	DUF72	0.96
PF07676	PD40	0.96
PF00069	Pkinase	0.96
PF08774	VRR_NUC	0.96
PF04545	Sigma70_r4	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.85
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	3.85
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	1.92
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	1.92
COG2372	Copper-binding protein CopC (methionine-rich)	Inorganic ion transport and metabolism [P]	1.92
COG0038	H+/Cl- antiporter ClcA	Inorganic ion transport and metabolism [P]	0.96
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.96
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.96
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.96
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.96
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.81 %
All Organisms	root	All Organisms	45.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.81 %
cellular organisms	root	All Organisms → cellular organisms	45.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.81 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	5.77 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15.38 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.88 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.88 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.92 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.81 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.92 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.92 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.92 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	0.96 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.96 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.88 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.92 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.92 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.96 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.96 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.96 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.88 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.92 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.92 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.96 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.96 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.96 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_10885245	All Organisms → cellular organisms → Bacteria → Proteobacteria	1374	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1030363	Not Available	847	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10034656	Not Available	1353	Open in IMG/M
3300000955\|JGI1027J12803_107202015	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	662	Open in IMG/M
3300005093\|Ga0062594_100754877	Not Available	890	Open in IMG/M
3300005174\|Ga0066680_10232354	All Organisms → cellular organisms → Bacteria → Proteobacteria	1169	Open in IMG/M
3300005332\|Ga0066388_101594112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1148	Open in IMG/M
3300005332\|Ga0066388_102769871	All Organisms → cellular organisms → Bacteria → Proteobacteria	895	Open in IMG/M
3300005332\|Ga0066388_103811508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	769	Open in IMG/M
3300005332\|Ga0066388_107143378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	561	Open in IMG/M
3300005332\|Ga0066388_107548390	All Organisms → cellular organisms → Bacteria → Proteobacteria	545	Open in IMG/M
3300005332\|Ga0066388_107653478	Not Available	541	Open in IMG/M
3300005332\|Ga0066388_108492591	Not Available	511	Open in IMG/M
3300005363\|Ga0008090_15626792	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300005713\|Ga0066905_100957429	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300005713\|Ga0066905_101450551	Not Available	623	Open in IMG/M
3300005713\|Ga0066905_101829318	Not Available	560	Open in IMG/M
3300005764\|Ga0066903_101016899	Not Available	1517	Open in IMG/M
3300005764\|Ga0066903_102161601	Not Available	1072	Open in IMG/M
3300005764\|Ga0066903_103633408	Not Available	830	Open in IMG/M
3300005764\|Ga0066903_103875339	Not Available	803	Open in IMG/M
3300005764\|Ga0066903_104309084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	761	Open in IMG/M
3300005764\|Ga0066903_105132244	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	693	Open in IMG/M
3300005764\|Ga0066903_105316782	Not Available	680	Open in IMG/M
3300005764\|Ga0066903_105786704	Not Available	649	Open in IMG/M
3300005764\|Ga0066903_106069677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	632	Open in IMG/M
3300005764\|Ga0066903_108610888	Not Available	519	Open in IMG/M
3300005842\|Ga0068858_102438993	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	517	Open in IMG/M
3300006844\|Ga0075428_100122741	All Organisms → cellular organisms → Bacteria	2827	Open in IMG/M
3300006846\|Ga0075430_100992355	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300006852\|Ga0075433_11196430	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300006852\|Ga0075433_11733532	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300006854\|Ga0075425_100593100	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300006854\|Ga0075425_102126219	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300006854\|Ga0075425_102433006	Not Available	581	Open in IMG/M
3300009100\|Ga0075418_10693826	Not Available	1097	Open in IMG/M
3300009100\|Ga0075418_12798149	Not Available	533	Open in IMG/M
3300009101\|Ga0105247_11310931	Not Available	582	Open in IMG/M
3300009156\|Ga0111538_10349392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1872	Open in IMG/M
3300009156\|Ga0111538_10399505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1741	Open in IMG/M
3300009792\|Ga0126374_10276358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1112	Open in IMG/M
3300009792\|Ga0126374_11410774	Not Available	568	Open in IMG/M
3300010043\|Ga0126380_10426464	Not Available	994	Open in IMG/M
3300010043\|Ga0126380_10482296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	946	Open in IMG/M
3300010043\|Ga0126380_11096943	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300010046\|Ga0126384_11159795	Not Available	711	Open in IMG/M
3300010046\|Ga0126384_12005241	Not Available	553	Open in IMG/M
3300010047\|Ga0126382_11929031	Not Available	560	Open in IMG/M
3300010047\|Ga0126382_12336658	Not Available	518	Open in IMG/M
3300010048\|Ga0126373_10462168	Not Available	1306	Open in IMG/M
3300010048\|Ga0126373_11399939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	765	Open in IMG/M
3300010358\|Ga0126370_10509050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1019	Open in IMG/M
3300010359\|Ga0126376_10453694	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1172	Open in IMG/M
3300010360\|Ga0126372_10694432	Not Available	992	Open in IMG/M
3300010360\|Ga0126372_11860319	Not Available	646	Open in IMG/M
3300010361\|Ga0126378_10284300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1754	Open in IMG/M
3300010361\|Ga0126378_11686263	Not Available	720	Open in IMG/M
3300010362\|Ga0126377_12465527	Not Available	596	Open in IMG/M
3300010366\|Ga0126379_10013396	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5873	Open in IMG/M
3300010366\|Ga0126379_11865584	Not Available	705	Open in IMG/M
3300010366\|Ga0126379_12292664	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300010376\|Ga0126381_100499067	Not Available	1716	Open in IMG/M
3300010376\|Ga0126381_101190665	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1101	Open in IMG/M
3300010376\|Ga0126381_103947990	Not Available	578	Open in IMG/M
3300010376\|Ga0126381_104137002	Not Available	563	Open in IMG/M
3300010398\|Ga0126383_12795061	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300012356\|Ga0137371_10240436	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300012951\|Ga0164300_10181956	Not Available	1014	Open in IMG/M
3300012961\|Ga0164302_10669942	Not Available	763	Open in IMG/M
3300012971\|Ga0126369_10859251	Not Available	991	Open in IMG/M
3300012971\|Ga0126369_11738118	Not Available	713	Open in IMG/M
3300015371\|Ga0132258_10464463	All Organisms → cellular organisms → Bacteria	3158	Open in IMG/M
3300015371\|Ga0132258_12506419	Not Available	1290	Open in IMG/M
3300015371\|Ga0132258_12678829	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1244	Open in IMG/M
3300015374\|Ga0132255_101095839	Not Available	1197	Open in IMG/M
3300016294\|Ga0182041_10351799	Not Available	1239	Open in IMG/M
3300016294\|Ga0182041_11398574	Not Available	642	Open in IMG/M
3300016319\|Ga0182033_10248823	Not Available	1443	Open in IMG/M
3300016422\|Ga0182039_11190513	Not Available	688	Open in IMG/M
3300016422\|Ga0182039_12202162	Not Available	509	Open in IMG/M
3300021560\|Ga0126371_11716470	Not Available	751	Open in IMG/M
3300031681\|Ga0318572_10847089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300031713\|Ga0318496_10520767	Not Available	657	Open in IMG/M
3300031744\|Ga0306918_10712212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	785	Open in IMG/M
3300031751\|Ga0318494_10060330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2024	Open in IMG/M
3300031782\|Ga0318552_10108292	Not Available	1376	Open in IMG/M
3300031782\|Ga0318552_10529885	Not Available	601	Open in IMG/M
3300031805\|Ga0318497_10452053	Not Available	719	Open in IMG/M
3300031820\|Ga0307473_10653351	Not Available	733	Open in IMG/M
3300031845\|Ga0318511_10139625	All Organisms → cellular organisms → Bacteria → Proteobacteria	1054	Open in IMG/M
3300031879\|Ga0306919_10368125	All Organisms → cellular organisms → Bacteria → Proteobacteria	1099	Open in IMG/M
3300031890\|Ga0306925_10885284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	919	Open in IMG/M
3300031894\|Ga0318522_10175943	Not Available	809	Open in IMG/M
3300031897\|Ga0318520_10242552	All Organisms → cellular organisms → Bacteria → Proteobacteria	1073	Open in IMG/M
3300031941\|Ga0310912_10907308	Not Available	678	Open in IMG/M
3300031942\|Ga0310916_11305213	Not Available	597	Open in IMG/M
3300032025\|Ga0318507_10432837	Not Available	573	Open in IMG/M
3300032042\|Ga0318545_10181157	Not Available	752	Open in IMG/M
3300032052\|Ga0318506_10432690	Not Available	583	Open in IMG/M
3300032059\|Ga0318533_10181319	Not Available	1501	Open in IMG/M
3300032076\|Ga0306924_10231246	All Organisms → cellular organisms → Bacteria	2123	Open in IMG/M
3300032180\|Ga0307471_101148296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	942	Open in IMG/M
3300032261\|Ga0306920_100464839	All Organisms → cellular organisms → Bacteria → Proteobacteria	1879	Open in IMG/M
3300033290\|Ga0318519_10269180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	990	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.65%
Host-Associated	Host-Associated	16.35%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.65%
Plants	Host-Associated → Plants	16.35%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.54%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.46%
Loam	Environmental → Terrestrial → Soil → Loam	20.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	19.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	27.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	19.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.38%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_108852451	3300000550	Soil	AHYFHGNLILALWLVWSVGSLAGGIAGGVLLEKLGAMSGKMQKSVLRLAYLVAIAGALLPFLN*
AF_2010_repII_A01DRAFT_10303632	3300000580	Forest Soil	VAHRIVAVIAHYFHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKTQKSVLRLAYLVAIAGALLPFLN*
AF_2010_repII_A1DRAFT_100346563	3300000597	Forest Soil	IEWLIGIVAVIAHYFHGNLILALWLVWSVGSFAGGLVGGVLLEKLGAMPGKMQKSVLRLAYLVAIAGALLPFLNWGRGKG*
JGI1027J12803_1072020151	3300000955	Soil	YFHGNLILALWLVWSVGSFAGGLAGGILLEKLGAMPGNIQKSVLRLAYLVAIAGALLPFLN*
Ga0062594_1007548773	3300005093	Soil	AHYFHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMPGNIQRIVLRLAYLVAIAGALLPFLN*
Ga0066680_102323543	3300005174	Soil	WLVWSVGSFAGGLVGGVLLEKLGAMSGKMQKSVLRLAYLAAIAGALLPFLNWGRGRG*
Ga0066388_1015941122	3300005332	Tropical Forest Soil	GIVAVIAHYFHGNLILALWLVWSVGSFAGGLAGGVLLEKQGAMSGKSQKSVLRLAYLVAIAGALLPSLNWGRGKG*
Ga0066388_1027698711	3300005332	Tropical Forest Soil	IAHYFHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGNTQKSVLRLAYLVAIAGALLPFLNWAGGKG*
Ga0066388_1038115083	3300005332	Tropical Forest Soil	LALWLVWSVGSFAGGLAGGVLLEKLGAMSGKIQKSVLRLAYLVAIAGALLPFLNWGRGKG
Ga0066388_1071433781	3300005332	Tropical Forest Soil	LILAVWLVWSVGSFAGGLAGGVLLNKLGAMPGKIQQTVLRLAYLAAIAGALLPFLN*
Ga0066388_1075483901	3300005332	Tropical Forest Soil	LILAVWLVWSVGSFAGGLAGGVLLNKLGAMPGKIQQTVLRFAYLVAIAGALLPFLDWGKW
Ga0066388_1076534781	3300005332	Tropical Forest Soil	WLIGIVAVIAHYFHGNLILALWLVWSVGSFAGGLAGGVLLKKLAAMSGKIQKSVLRLAYLVAIAGALLPFLNWGKSITH*
Ga0066388_1084925911	3300005332	Tropical Forest Soil	VAVIAHYFHGNLILALWLVWSVGSFAGGLVGGVLLEKLGEMPGKMQKSVLRLAYLVAIAGALLPFLNWGRGKG*
Ga0008090_156267922	3300005363	Tropical Rainforest Soil	LILALWLVWSVGSFAGGLAGGVLLEKLGAMPGNIQKIVLRLAYLVAIAGALLPFLNWESITH*
Ga0066905_1009574293	3300005713	Tropical Forest Soil	LALWLVWSVGSFAGGLVGGVLLEKLGAMSGKMQKSVLRLAYLVAIAGALLPFLNWGRGKG
Ga0066905_1014505511	3300005713	Tropical Forest Soil	IGIVAVIAHYFHGNLILALWLVWSVASFAGGLAGGVVLEKLGAMPGNIQKIALRLAYLVAIAGALLPFAN*
Ga0066905_1018293182	3300005713	Tropical Forest Soil	HYFHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKIQKIVLRFAYLVAIAGALLPFLNRGKC*
Ga0066903_1010168995	3300005764	Tropical Forest Soil	VAVIAHYFHGNLILALWLVWSVGSFAGGLMGGLLLENLGAMSGKMQKSVLRLAYLVAIAGALLPFLNWGS*
Ga0066903_1021616012	3300005764	Tropical Forest Soil	AHYFHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKIQKIVLRFAYLVAIAGALLPFLNRGKC*
Ga0066903_1036334081	3300005764	Tropical Forest Soil	HGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKTQKSMLRLAYLVAIAGALLPFLNWGRGGAL*
Ga0066903_1038753392	3300005764	Tropical Forest Soil	AVIAHYFHGNLILALWLVWSVGSFAGGLAGGVLLEKLGARSGKIQKSVLRLAYLVAIAGDLLPFLNWGRGKG*
Ga0066903_1043090842	3300005764	Tropical Forest Soil	IAHYFHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKIQKSVLRLAYLAAIAGALLPFLNGGKGKG*
Ga0066903_1051322442	3300005764	Tropical Forest Soil	FIEWLICIVAVIAHYFHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKIQKSVLRLAYLVAIAGALLPFLNWGEGKG*
Ga0066903_1053167821	3300005764	Tropical Forest Soil	IGIVAVIAHYFHGNLILALWLVWSVGSFAGGLAGGVLLKKLAATSGKIQKSVLRLAYLVAIAGAVLPFLNWGKSMTH*
Ga0066903_1057867042	3300005764	Tropical Forest Soil	IGIVAVIAHYFHGNLILALWLVWSVGSFAGGLAGGVLLKKLAAMSGKIQKSMLRLAYLVAIAGALLPFLNWGKSMTH*
Ga0066903_1060696772	3300005764	Tropical Forest Soil	VAVIAHYFHGNLILALWLVWSVGSFAGGLMGGLLLENLGAMSGKMQKSALRLAYLVAIAGAMLPFLNWGSGKG*
Ga0066903_1086108882	3300005764	Tropical Forest Soil	WLICIVAVIAHYFHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMPGKIQKRVLRLAYLVAIAGALLPFLNWAKDKG*
Ga0068858_1024389932	3300005842	Switchgrass Rhizosphere	LALWLVWSVGSFVGGLAGGILLEKLGAMPGNIQKNVLRLAYLVAIAGALLPFLN*
Ga0075428_1001227411	3300006844	Populus Rhizosphere	ARFIEWLIGIVAVIAHYFHGNLILALWLVWSVGSFAGGLAGGVFLEKLGAMSGKIQKRVLRLAYLLAIAGALRPFLNWGKG*
Ga0075430_1009923551	3300006846	Populus Rhizosphere	FHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKVQKSVLRLAYLVAIAGTLLPFLNWGK*
Ga0075433_111964302	3300006852	Populus Rhizosphere	LALWLVWSVGSFAGGLAGGVFLEKLGAMSGKIQKRVLRLAYLLAIAGALRPFLNWGKG*
Ga0075433_117335321	3300006852	Populus Rhizosphere	IVAVIAHYFHGNLILALWLVWSVGSFAGGLAGGVLLKKLAAMSGKIQKSVLRLAYLVAIAGALLPFLS*
Ga0075425_1005931001	3300006854	Populus Rhizosphere	VAVIAHYFHGNLILALWLVWSVGSFAGGLVGGVLLEKLGAMSGKMQKSVLRLAYLAAIAGALLPFLNWGRGRG*
Ga0075425_1021262191	3300006854	Populus Rhizosphere	VAVIAHYFHGNLILALWLVWSVGSLAGGIAGGVLLEKLGAMSGKTQKSALRLAYLVAIAGALRPFLNWGNR*
Ga0075425_1024330062	3300006854	Populus Rhizosphere	AHYFHGNLILALWLVWSVGSFAGGLTGGVLLEKLGAMPGKIQKNVLRLAYLVAIVGALLPFLYWRKG*
Ga0075418_106938262	3300009100	Populus Rhizosphere	LWLVWSVGSFAGGLAGGVLLEKLGATSGKMQKSVLRLAYLVAIAGALLPFLNWGRGKG*
Ga0075418_127981491	3300009100	Populus Rhizosphere	VIVAVIAHYFHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKVQKSVRRLAYLGAIAGTLLPCLNWGK*
Ga0105247_113109311	3300009101	Switchgrass Rhizosphere	RFIEWLIGIIAVIAHYFHGNLILALWLVWSVGSFAGGLAGGLFLEKLGAMSGKMQKSVLRLAYLVAIAGALLPFLNWGSGKG*
Ga0111538_103493922	3300009156	Populus Rhizosphere	ILALWLVWSVGSFAGGLAGGVLLEKLGATSGKMQKSVLRLAYLVAIAGALLPFLNWGRGKG*
Ga0111538_103995052	3300009156	Populus Rhizosphere	CIVAVIAHYFHGNLILALWLVWSVGSLAGGIAGGVLLEKLGAMSGKIQKSVLRLAYLVAIAGALLPFLN*
Ga0126374_102763581	3300009792	Tropical Forest Soil	AVIAHYFHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKIQKSVLRLAYLVGIAGALLPFLNWGRG*
Ga0126374_114107741	3300009792	Tropical Forest Soil	FHGNLILALWLVWSVGSFAGGLVGGVLLEKLGAMSGKMQKSVLRLAYLVAIAGALLPFLKKE*
Ga0126380_104264641	3300010043	Tropical Forest Soil	ICIVAVIAHYFHGNLILALWLVWSVGSLAGGLAGGVLLEKLGAMSGRIQKSVLRLAYLVAIAGALLPFLN*
Ga0126380_104822962	3300010043	Tropical Forest Soil	VAVIAHYFHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKIQKSVLRLAYLVAIAGALLPFLNWGKG*
Ga0126380_110969431	3300010043	Tropical Forest Soil	AHYFHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKIQKIALRIAYLVAIAGALLPFVNLGKG*
Ga0126384_111597951	3300010046	Tropical Forest Soil	GNLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKIQKSVLRLAYLVGIAGALLPFLNWGRG*
Ga0126384_120052412	3300010046	Tropical Forest Soil	EWLIGIVAVIAHYFHGNLILALWLVWSMGSFAGGLTGGVLLEKLGAMSGKTQKIVLRLAYLVAIAGALLPFLN*
Ga0126382_119290311	3300010047	Tropical Forest Soil	NLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKTQKSVLRLAYLVAIAGALLPFLNWAGGKG*
Ga0126382_123366581	3300010047	Tropical Forest Soil	IEWLIGIVAVIAHYFHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKIQKSALRLAYLVAIAGALLPFVNWGKG*
Ga0126373_104621681	3300010048	Tropical Forest Soil	MPGSSAPASASSWSPSSEWLIGIVAVIAHYFHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKIQKSVLRLAYLVAIAGALLPFLNWGGGKG*
Ga0126373_113999392	3300010048	Tropical Forest Soil	ARFIEWLICIVAVIAHYFHGNLILALWLVWSVGSFVGGLVGGVLLEKLGAMSGKMQKSVLRLAYLAAIAGALLPFLNWGRGRG*
Ga0126370_105090501	3300010358	Tropical Forest Soil	FHGNLILALWLVWSVGSFAGGLAGGVLLEKQGAMSGKSQKSVLRLAYLVAIAGALLPFLNWGRGKG*
Ga0126376_104536941	3300010359	Tropical Forest Soil	RFIEWLIGIVAVIAHYFHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKIQKRVLRLAYLVAIAAALLPFLNWGRGKG*
Ga0126372_106944321	3300010360	Tropical Forest Soil	HYFHGNLILALWLVWSVASFAGGLAGGGLLKKLGAMPGNIQNIVLRLAYLAAIAGALLPFLN*
Ga0126372_118603191	3300010360	Tropical Forest Soil	NLILALWLVWSVGSFAGGLTGGVLLEKQGAMSGKSQKSVLRLAYLVAIAGALLPFLNWGRGKG*
Ga0126378_102843001	3300010361	Tropical Forest Soil	EWLICIVAVIAHYFHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKIQKSVLRLAYLVGIAGALLPFLNWGRG*
Ga0126378_116862631	3300010361	Tropical Forest Soil	FHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKIQKSVLRLAYLVAIAGALLPFLNWGGGKG*
Ga0126377_124655271	3300010362	Tropical Forest Soil	IVAVIAHYFHGNLILALWLVWSVGSLAGGIAGGVLLEKLGAMSGKIQKSVLRLAYLVAIAGALLPFLNWGKG*
Ga0126379_100133966	3300010366	Tropical Forest Soil	LALWLVWSVGSLAGGLAGGVLLEKLGAMSGKIQKSVLRLAYLVAIAGALPPFLN*
Ga0126379_118655841	3300010366	Tropical Forest Soil	LILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKIQKSVLRLAYLVAIAGALLPFLNWGGGKG*
Ga0126379_122926641	3300010366	Tropical Forest Soil	NLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKIQKSVLRLAYLAAIAGALLPFLNWGKGKG*
Ga0126381_1004990673	3300010376	Tropical Forest Soil	WLVWSVGSFAGGLAGGVLLEKLGAMSGRIQNIVLRLAYLVALAGALLPFGNLGSGRG*
Ga0126381_1011906651	3300010376	Tropical Forest Soil	NLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKIQKRVLRLAYLVAIAGALLPFLNWGRGKG*
Ga0126381_1039479902	3300010376	Tropical Forest Soil	ILGLWLVWSVGSFAGGLAGGVFLEKLGAMLGKIQKSVLRVAYLAAIAGALLPFLNWGKGKE*
Ga0126381_1041370024	3300010376	Tropical Forest Soil	LVWSVGSFAGGLAGGVLLEKLGAMSGKTQKSVLRLAYLVAIAGALLPFLNWGRGKG*
Ga0126383_127950611	3300010398	Tropical Forest Soil	NLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKIQKSVLRLAYLVAIAGALLPFLNWGKGKG*
Ga0137371_102404361	3300012356	Vadose Zone Soil	LICIVAVIAHYFHGNLILALWLVWSVGSFAGGLVGGVLLEKLGAMSGKMQKSVLRLAYLAAIAGALLPFLNWGRGRG*
Ga0164300_101819561	3300012951	Soil	EWLICIVAVIAHYFHGNLILAVWLVWSVGSFVGGLAGGVLLKKLGAMSGKIQKSVLRLAYLVAITGALLPFLN*
Ga0164302_106699421	3300012961	Soil	GNLILALWGVWSVGSFAGGLAGGVLLKKLGAMSGKIQKSVLRLAYLVAITGALLPFLN*
Ga0126369_108592511	3300012971	Tropical Forest Soil	LWLVWSVGSFAGGLAGGVLLEKLGAMSGKIQKSVLRLAYLVAIAGALLPFLNWGGGKG*
Ga0126369_117381181	3300012971	Tropical Forest Soil	IEWLICIVAVIAHYFHGNLILALWLVWSVGSFVGGLVGGVLLEKLGAMSGKMQKSVLRLAYLVAIAGALLPFLNWGRGKG*
Ga0132258_104644631	3300015371	Arabidopsis Rhizosphere	NLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKIQKIVLRLAYLVAIAGALLPFQNLGSGRG*
Ga0132258_125064191	3300015371	Arabidopsis Rhizosphere	VIAHYFHGNLILALWLVWSVGSFAGGLMGGVLLEKLGAMPGKMQKSVLRLAYLVAIAGALLPFLDWGRGKG*
Ga0132258_126788293	3300015371	Arabidopsis Rhizosphere	LILALWLVWSVGSFAGGLMGGLLLEKLGGMSGKMQKSVLRLAYLVAIAGALRPFLN*
Ga0132255_1010958392	3300015374	Arabidopsis Rhizosphere	FIEWLIVIVAVVAHYFHGNLILAVWLVWSVGSFAGGLVGGVLLEKLGTMPGNIQKIVLRLAYLVAIAGALLPFLNCAKW*
Ga0182041_103517992	3300016294	Soil	WLIGIVAVIAHYFHGNLILALWLVWSVGSFAGGLVGGVLLEKLGAMSGKMQKSVLRLAYLAAIAGALLPFLNWGRGKG
Ga0182041_113985742	3300016294	Soil	IVAVIAHYFHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKIQKSVLRLAYLVAIAGALLPFLNWGGGKG
Ga0182033_102488231	3300016319	Soil	AVIAHYFHGNLILALWLLWSVGSFAGGLAGGVLLEKLGAMSGKIQKSVLRLAYLVAIAGALLPFLNWGGGKG
Ga0182039_111905132	3300016422	Soil	YYFHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMPGKIQKIVLRLAYLVAIAGALLPFLNWGSITH
Ga0182039_122021621	3300016422	Soil	RFIEWLIGIVAVIAHYFHGNLILALWLVWSVGSFAGGLVGGVLLEKLGAMSGKMQKSVLRLAYLAAIAGALLPFLNWGRGKG
Ga0126371_117164701	3300021560	Tropical Forest Soil	ALWLVWSVGSFAGGLAGGVLLEKLSAMSGKIQKSVLRLAYLVAIAGALLPFLNWGKGKG
Ga0318572_108470891	3300031681	Soil	IVIVAVIAHYFHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKIQKSVLRLAYLVAIAGALLPFLNWGGGKG
Ga0318496_105207672	3300031713	Soil	LILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKTQKSVLRLAYLVAIAGALLPFLNWGRGGAR
Ga0306918_107122121	3300031744	Soil	LILALWLVWSVGSFAGGLVGGVLLEKLGAMSGKMQKSVLRLAYLAAIAGALLPFLNWGRGKG
Ga0318494_100603306	3300031751	Soil	IEWLIGIVAVIAHYFHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKIQKSVLRLAYLVAIAGALLPFLNWGGGKG
Ga0318552_101082923	3300031782	Soil	HGNLILVLWLVWSVGSFAGGLAGGVLLEKLGAMSGKTQKSVLRLAYLVAIAGALLPFLNWGRGGAR
Ga0318552_105298852	3300031782	Soil	FIEWLIGIVAVIAHYFHGNLILALWLVWSVGSFAGGLVGGVLLEKLGAMSGKMQKSVLRLAYLAAIAGALLPFLNWGRGKG
Ga0318497_104520531	3300031805	Soil	LALWLVWSVGSFAGGLAGGVLLEKLGAMSGKTQKSVLRLAYLVAIAGALLPFLNWGRGGA
Ga0307473_106533511	3300031820	Hardwood Forest Soil	GNLILALWLVWSVGSFAGGLAGGVLLKKLGAMSGKIQKSVLRLAYLVAITGALLPFLN
Ga0318511_101396253	3300031845	Soil	IEWLIGIVAVIAHYFHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKTQKSVLRLAYLVAIAGALLPFLNWGRGGAR
Ga0306919_103681251	3300031879	Soil	WLIGIIAVIAHYFHGNLILVLWLVWSVGSFAGGLAGGVLLEKLGAMSGKTQKSVLRLAYLVAIAGALLPFLNWGRGGAR
Ga0306925_108852843	3300031890	Soil	WLIVIVAVIAHYFHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKIQKSVLRLAYLVAIAGALLPFLNWGGGKG
Ga0318522_101759431	3300031894	Soil	LVWSVGSFAGGLAGGVLLEKLGAMSGKTQKSVLRLAYLVAIAGALLPFLNWGRGGAR
Ga0318520_102425521	3300031897	Soil	LILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKIQQSVLRLAYLVAIAGALLPFLNWGRGGAR
Ga0310912_109073081	3300031941	Soil	GNLILALWLVWSVGSFAGGLVGGVLLEKLGAMSGKMQKSVLRLAYLAAIAGALLPFLNWGRGRG
Ga0310916_113052131	3300031942	Soil	GGRRIIIIAVIAHYFHGNLILVLWLVWSVGSFAGGLAGGVLLEKLGAMSGKTQKSVLRLAYLVAIAGAVLPFLNWGRGKG
Ga0318507_104328372	3300032025	Soil	LALWLVWSVGSFAGGLTGGVLLEKLGAMPGKIQKIVLRLAYLVAIAGALVPFLNWESITH
Ga0318545_101811572	3300032042	Soil	FHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKTQKSVLRLAYLVAIAGALLPFLNWGRGGAR
Ga0318506_104326902	3300032052	Soil	HGNLILALWLVWSVGSFAGGLAGNVLLEKLGAMSGKTQKSVLRLAYLVAIAGALLPFLNWGRGGAR
Ga0318533_101813193	3300032059	Soil	FIEWLICIVAVIAHYFHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKIQKSVLRLAYLVAIAGALLPFLNWGGGKG
Ga0306924_102312466	3300032076	Soil	EWLIGIVAVIAHYFHGNLILALWLVWSVGSFAGGLVGGVLLEKLGAMSGKMQKSVLRLAYLAAIAGALLPFLNWGRGKG
Ga0307471_1011482962	3300032180	Hardwood Forest Soil	IVAVIAHYFHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKMQKSVLRLAYLVAIAGALLPFLNWGRGKG
Ga0306920_1004648395	3300032261	Soil	VIAHYFHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKIQKSVLRLAYLVAIAGALLPFLNWGGGKG
Ga0318519_102691801	3300033290	Soil	HYFHGNLILALWLVWSVGSFAGGLAGGVLLEKLGAMSGKTQKSVLRLAYLVAIVGALLPFLNWGRGGAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096837

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences