NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F096810

Metagenome / Metatranscriptome Family F096810

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F096810
Family Type Metagenome / Metatranscriptome
Number of Sequences 104
Average Sequence Length 119 residues
Representative Sequence VTDQRRSVKAATFRLWYELLEETVGHDPDEIAPGNRWSAVILLHDLIGVGLRNGAIRPIVIHSSGPGSYAHLMFRYTLDPEFDWSGEIQLMLDRGDPATRPDLLMAEIAAATGIAEHEDD
Number of Associated Samples 54
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 26.92 %
% of genes near scaffold ends (potentially truncated) 30.77 %
% of genes from short scaffolds (< 2000 bps) 92.31 %
Associated GOLD sequencing projects 53
AlphaFold2 3D model prediction Yes
3D model pTM-score0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil
(44.231 % of family members)
Environment Ontology (ENVO) Unclassified
(44.231 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(56.731 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 33.78%    β-sheet: 14.86%    Coil/Unstructured: 51.35%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.78
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
e.18.1.0: automated matchesd6zk94_6zk90.56728
a.25.1.9: Rv2844-liked2ib0a12ib00.56376
a.102.1.2: Cellulases catalytic domaind1ia6a_1ia60.55793
a.102.1.2: Cellulases catalytic domaind1ks8a11ks80.55247
a.25.1.2: Ribonucleotide reductase-liked4m1ha14m1h0.55058

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF13411MerR_1 10.58
PF07228SpoIIE 2.88
PF08031BBE 1.92
PF07739TipAS 0.96
PF00376MerR 0.96
PF00583Acetyltransf_1 0.96
PF01740STAS 0.96
PF13581HATPase_c_2 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG0277FAD/FMN-containing lactate dehydrogenase/glycolate oxidaseEnergy production and conversion [C] 1.92

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908045|KansclcFeb2_ConsensusfromContig913461All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium517Open in IMG/M
3300004157|Ga0062590_100761774All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium883Open in IMG/M
3300004463|Ga0063356_100635009All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1452Open in IMG/M
3300004463|Ga0063356_101243577All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1085Open in IMG/M
3300006845|Ga0075421_102309938All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium565Open in IMG/M
3300006918|Ga0079216_10123807All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1299Open in IMG/M
3300007004|Ga0079218_10700373All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium950Open in IMG/M
3300009789|Ga0126307_10045453All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium3421Open in IMG/M
3300009789|Ga0126307_10066753All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium2826Open in IMG/M
3300009789|Ga0126307_10069762All Organisms → cellular organisms → Bacteria2765Open in IMG/M
3300009789|Ga0126307_10124559All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium2054Open in IMG/M
3300009789|Ga0126307_10489309All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium993Open in IMG/M
3300009789|Ga0126307_10836133All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium743Open in IMG/M
3300009789|Ga0126307_11537652All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium540Open in IMG/M
3300009840|Ga0126313_10998088All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium686Open in IMG/M
3300009840|Ga0126313_11766754All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium517Open in IMG/M
3300009840|Ga0126313_11792932All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium513Open in IMG/M
3300010036|Ga0126305_10021671All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium3398Open in IMG/M
3300010036|Ga0126305_10162852All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1395Open in IMG/M
3300010037|Ga0126304_10119254All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1684Open in IMG/M
3300010037|Ga0126304_10162748All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1449Open in IMG/M
3300010037|Ga0126304_11113186All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium540Open in IMG/M
3300010038|Ga0126315_10404009All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium859Open in IMG/M
3300010038|Ga0126315_10444019All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium821Open in IMG/M
3300010038|Ga0126315_10536527All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium749Open in IMG/M
3300010038|Ga0126315_11104310All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium535Open in IMG/M
3300010039|Ga0126309_10182993All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1148Open in IMG/M
3300010039|Ga0126309_11302322All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium503Open in IMG/M
3300010040|Ga0126308_10135640All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1542Open in IMG/M
3300010040|Ga0126308_10148484All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1478Open in IMG/M
3300010040|Ga0126308_10360071All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium965Open in IMG/M
3300010040|Ga0126308_10400329All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium916Open in IMG/M
3300010041|Ga0126312_10145650All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1642Open in IMG/M
3300010041|Ga0126312_10252228All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1239Open in IMG/M
3300010041|Ga0126312_10323969All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1089Open in IMG/M
3300010042|Ga0126314_10025222All Organisms → cellular organisms → Bacteria3662Open in IMG/M
3300010042|Ga0126314_10240338All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1283Open in IMG/M
3300010042|Ga0126314_10941943All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium639Open in IMG/M
3300010042|Ga0126314_11112522All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium588Open in IMG/M
3300010044|Ga0126310_10139897All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1527Open in IMG/M
3300010044|Ga0126310_10141826All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1518Open in IMG/M
3300010044|Ga0126310_10281846All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1136Open in IMG/M
3300010044|Ga0126310_11100439All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium632Open in IMG/M
3300010044|Ga0126310_11233723All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium602Open in IMG/M
3300010045|Ga0126311_10120890All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1827Open in IMG/M
3300010045|Ga0126311_10124169All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1806Open in IMG/M
3300010045|Ga0126311_10376243All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1088Open in IMG/M
3300010045|Ga0126311_11525724All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium560Open in IMG/M
3300010045|Ga0126311_11680004All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium536Open in IMG/M
3300010137|Ga0126323_1003749All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium637Open in IMG/M
3300010166|Ga0126306_10164259All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1658Open in IMG/M
3300010166|Ga0126306_10484130All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium977Open in IMG/M
3300010166|Ga0126306_10650691All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium842Open in IMG/M
3300010166|Ga0126306_10685937All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium821Open in IMG/M
3300012212|Ga0150985_101915870All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium2242Open in IMG/M
3300012212|Ga0150985_104789025All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium956Open in IMG/M
3300012212|Ga0150985_117579598All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium577Open in IMG/M
3300012212|Ga0150985_118346416All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1563Open in IMG/M
3300012212|Ga0150985_120996425All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium819Open in IMG/M
3300012469|Ga0150984_101038350All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium606Open in IMG/M
3300012469|Ga0150984_101648378All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium666Open in IMG/M
3300012680|Ga0136612_10532551All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium596Open in IMG/M
3300012681|Ga0136613_10231585All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1037Open in IMG/M
3300012684|Ga0136614_10360164All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1069Open in IMG/M
3300014272|Ga0075327_1209554All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium625Open in IMG/M
3300015371|Ga0132258_12308735All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1349Open in IMG/M
3300015373|Ga0132257_103708641All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium556Open in IMG/M
3300017787|Ga0183260_10264553All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1182Open in IMG/M
3300017789|Ga0136617_10023909All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium5448Open in IMG/M
3300018422|Ga0190265_13083905All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium556Open in IMG/M
3300018466|Ga0190268_10155674All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1175Open in IMG/M
3300018469|Ga0190270_12887069All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium543Open in IMG/M
3300018476|Ga0190274_13762408All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium513Open in IMG/M
3300019254|Ga0184641_1222034All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium795Open in IMG/M
3300027691|Ga0209485_1175664All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium655Open in IMG/M
3300028041|Ga0247719_1092968All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium758Open in IMG/M
3300028592|Ga0247822_10947418All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium709Open in IMG/M
3300030829|Ga0308203_1019032All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium876Open in IMG/M
3300030830|Ga0308205_1030999All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium655Open in IMG/M
3300030902|Ga0308202_1021572All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1016Open in IMG/M
3300030902|Ga0308202_1023346All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium990Open in IMG/M
3300030903|Ga0308206_1057703All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium787Open in IMG/M
3300030903|Ga0308206_1077846All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium709Open in IMG/M
3300030903|Ga0308206_1134934All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium582Open in IMG/M
3300030905|Ga0308200_1024031All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium998Open in IMG/M
3300031058|Ga0308189_10019558All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1571Open in IMG/M
3300031058|Ga0308189_10043372All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1212Open in IMG/M
3300031058|Ga0308189_10550479All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium503Open in IMG/M
3300031091|Ga0308201_10097359All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium843Open in IMG/M
3300031092|Ga0308204_10060351All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium950Open in IMG/M
3300031092|Ga0308204_10076459All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium875Open in IMG/M
3300031092|Ga0308204_10302666All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium536Open in IMG/M
3300031852|Ga0307410_10194907All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1543Open in IMG/M
3300031852|Ga0307410_10743299All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium830Open in IMG/M
3300031903|Ga0307407_11165827All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium601Open in IMG/M
3300031911|Ga0307412_10284875All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1299Open in IMG/M
3300031911|Ga0307412_11003073All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium738Open in IMG/M
3300031938|Ga0308175_101544770All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium742Open in IMG/M
3300031995|Ga0307409_100274840All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1554Open in IMG/M
3300031995|Ga0307409_100454565All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1237Open in IMG/M
3300032002|Ga0307416_100770264All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1056Open in IMG/M
3300032004|Ga0307414_11118913All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium728Open in IMG/M
3300032126|Ga0307415_100196492All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1596Open in IMG/M
3300032159|Ga0268251_10131378All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium926Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil44.23%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil19.23%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere9.62%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand4.81%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere4.81%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.92%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.92%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.92%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere1.92%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.96%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.96%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.96%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.96%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave0.96%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908045Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010137Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012680Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)EnvironmentalOpen in IMG/M
3300012681Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)EnvironmentalOpen in IMG/M
3300012684Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)EnvironmentalOpen in IMG/M
3300014272Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017787Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)EnvironmentalOpen in IMG/M
3300017789Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019254Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300027691Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300028041Soil microbial communities from hillslope of Landscape Evolution Observatory, University of Arizona, Oracle, AZ, United States - 4-1-E_DEnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300030829Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030830Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030902Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030903Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030905Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031091Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031092Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300032159Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
KansclcFeb2_064904602124908045SoilVQAAIFRAWYELVDEIVAHDPEEVAPGNRCSAIILLHELIGIGLRHGAIRAVVIHSSGPSSYAHLMFRYTLNPEFDWNGEISLASDPGDDITRLDRLVTEFETATGIPEREDD
Ga0062590_10076177413300004157SoilVTGQRPRIQAANFRAWYELLEETVAHDPDEIAPGNQWSAVVLLHELIGVGMRNGAIRPIIIHSSGPSSYAHLMFRYVLEPEFDWSSEIQLVSDRGQAATWSDLFVA
Ga0063356_10063500933300004463Arabidopsis Thaliana RhizosphereQCCPAASMTDRRRSVKAATFRLWYELLEEAVAHDPDEIAPGNQWSAVVLLHDLIGVGLRNGAVRPIVIHSSGPSSYAHLMFRYTLDPEFDWSGEMQLAADSEDAAIQSDLLIAEIEAATGIAEHDDE*
Ga0063356_10124357723300004463Arabidopsis Thaliana RhizosphereLKSHRRNRMPVNPGRTVQAAIFRTWYELVDEIVAHDPEEVAPGNRCSAIILLHELIGIGLRHGAIRAVVIHSSGPSSYAHLMFRYTLNPEFDWNGEISLASDPGDDITRLDRLVTELETATGIPECEDD*
Ga0075421_10230993813300006845Populus RhizosphereMMDQRRTVEAATFRLWYELLEETVGHDPDAIAPGNRWSAVILLHDLIGVGLRNGAIRPIVIHSSGPGSYAHLMFRYTLDLEFDWSGEVQLDRGDPATEPDLLIAEVEAAT
Ga0079216_1012380723300006918Agricultural SoilMTDQQRTVAAATFRVWYELLEEMVGHDPDDVAPGNRWSAVILLHELIGIGLRQGAIRPIVIHSSGPGSYAHLMFRYTLDPAFDWSGEIQLAADRGDAATRLDLLIAEVAAATGVPGREDDERD*
Ga0079218_1070037333300007004Agricultural SoilMDHGRTVEAATYRLWYELLEETVGHDPDEIAPGNRWSAVILLHNLIGIGVRSGAIRPIVIHSSGPGSYAHLMFRYILNPEFDWSGEIQLMLDHGDAAAQPDLLIAEV
Ga0126307_1004545343300009789Serpentine SoilMDQHRTVEAATFRLWYELLEETVGHDPDEIAPGNRWSAVILLHDLIGVGLRNGAIRPIVIHSSGPGSYAHLMFRYTLDSEFDWSGEIQLVLDRGDPATQPDLLIAEVAAATGVTEHEDDG
Ga0126307_1006675333300009789Serpentine SoilMTDRRRIIEAASFRLWFELLEETVAHEPDDIAPGNRWSAVILLHELIGIGLRNGAVRPIVIHSSGPVSHAHLMFRYTLDPEFDWSGEMQLAADSGDAAIQSDLLVAEIEAATGITEHEDDE*
Ga0126307_1006976233300009789Serpentine SoilVWYELLEETVAHDTDDLAPGNQWSAVILLQDLIAIGMRSGAIRPIVIHSSGPSSYAHLMFRYILEPEFDWGGEIQLVPDRGEAATWADRFVAEIEAATGIAEHEDDERD*
Ga0126307_1012455923300009789Serpentine SoilMMDQRRTIKAATFRVWYELLEETVGHDPDEIAPGNRWSAVILLHDLIGVGLRSGAIRPIVIHSSGPGSYAHLMFRYTLDPEFDWSGEIPLMLDREDPATQPDLLIAEVAAATGFAEHEDDE*
Ga0126307_1048930923300009789Serpentine SoilVTDQRRRVPVATFRAWYELLEETVAHDPDEIAPGNQWSAVILLHELIGVGVRGGAILPIVIHSSGPSSYAHLMFRYVLEPEFDWSGEIQLAPERAQAATWLDRFVTEIEAATSIAEHEDDERN*
Ga0126307_1083613323300009789Serpentine SoilVIDQRHSVKAAIFRVWYELLEETVGHDPDEIAPGNRWSAVILLHDLIGIGLRNGAVRPIVIHSSGPGSYAHLMFRYTLDPEFDWSGEIQLPPGRGDPASQSDLLVAEVEAATGIAEHEDDE*
Ga0126307_1153765213300009789Serpentine SoilQRRTIKAATFRVWYELLEETVGHDPDEIAPGNRWSAVILLHNLIGVGLRSGAIRPIVIHSSGPGSYAHLMFRFTLDPEFDWSGEIQLMPDHEDPAFQADLLIAEIAAATGFAEHEDDE*
Ga0126313_1099808823300009840Serpentine SoilSVNAATFRVWYELLEETVAHDPEDIAPGNQWSAVILLHELIGVGLRNGAIRPIVIHSSGPSSYAHLMFRYALEPEFDWSGEIQLVPDRGEVATWPDQFVAEIEAATGMAEHEDDERG*
Ga0126313_1176675423300009840Serpentine SoilMTDRRRIIEAASFRLWFELLEETVAHDPDDIAPGNRWSAVILLHELIGIGLRNGAVRPIVIHSSGPVSHAHLMFRYTLDPEFDWSGEMQLAADSGDAAIQSDLLVAEIEAATGITDA*
Ga0126313_1179293213300009840Serpentine SoilVTEQRRSVNAATFRVWYELLEEAVAHDPDEIAPGNRWNAVILLHELIGVGVRSGAIRPIVIHSSGPSSYAHLMFRYVLEPEFDWSGEIQLAPERAQAATWLDRFVTEIEAATSIAEHEDDERD*
Ga0126305_1002167133300010036Serpentine SoilVIDQRHSVKAAIFRVWYELLEETVGHDPDEIAPGTRWSAMILLHDLIGIGLRNGAVRPIVIHSSGPGSYAHLMFRYTLDPEFDWSGEIQLPPGRGDPASQSDLLVAEVEAATGIAEHEDDE*
Ga0126305_1016285233300010036Serpentine SoilVWYELLEETVAHDTDDLAPGNQWSAVILLQDLIAIGMRSGAIRPIVIHSSGPSSYAHLMFRYILEPEFDWGGEIQLVPDRGEAATWADRFVVEIEAATGIAEHEDDERD*
Ga0126304_1011925423300010037Serpentine SoilMTDRRRIIEAASFRLWFELLEETVAHEPDDIAPGNRWSAVILLHELIGIGLRNGAVRPIVIHSSGPVSHAHLMFRYTLDPEFDWSGEMQLAADSGDAAIQSDLLVAEIEAATGITDA*
Ga0126304_1016274833300010037Serpentine SoilVIDQRHSVKAAIFRVWYELLEETVGHDPDEIAPGNRWSAVILLHDLIGIGLRNGAVRPIVIHSSGPGSYAHLMFRYTLDSEFDWSGEIQLPPDRGDPASQSDLFIAEVEAATGIAEHEDDE*
Ga0126304_1111318613300010037Serpentine SoilFRAWYELLEETVAHDPDDVAPGNRWSALLLLHELIGVGLRNGAIRPIVIHSSGPSSYAHLMFRYTLDPEFDWNGAIQLMLDREDAATQSDLLLAEIEAATGIAAHEDNERA*
Ga0126315_1040400913300010038Serpentine SoilVTDQRRGVNAATFRLWFELLEETVAHDPDEIATGNRWSAVILLHELIGIGLRNGAIHPIVIHSSGPSSFAHLMFRYTLEPEFDWSGEIQLVPEGSEAASWPNLLVAEIEAATG
Ga0126315_1044401923300010038Serpentine SoilLRYVRCHPLAAARVTDHQRSVKAATFRVWYELLEETVAHDTDDLAPGNQWSAVILLQDLIAIGVRSGAIRPIVIHSSGPSSYAHLMFRYVLEPEFDWSGEIPLAPERAQAATWLDRFVTEIEAATSIAEHEDDERD*
Ga0126315_1053652713300010038Serpentine SoilMTDRRRTVKAATFRLWYELLEETVAHDPDDVAPGNRWSAVILLHDLIGVGLRNGAVHPVVIHSSGPSSYAHLMFRYSLDPEFDWSGEIQLAPDREDAAIRSDPLIAEIEAATGIAEHEVDERG*
Ga0126315_1110431013300010038Serpentine SoilMTDRRRSVKAATFRLWYELLEDTVAHDPEDIAPGNQWSAVILLHELIGVGMRNGAVRPIVIHSSGPVSHAHLMFRYSLDPEFDWSGEMQLAADSVDAAIQSDLLIAEIEAATGIAEHEDDE*
Ga0126309_1018299313300010039Serpentine SoilVIGQRRTVAAATFRLWYELLEEAVGHDPDDVAPGNRWSAVILLHDLIGVGLRNGAIRPIVIHSSGPGSYAHLMFRYTLEPEFDWSGEIQLTLDRGDPVTQPDLLIAEVEAATGIAEHEDDE*
Ga0126309_1130232213300010039Serpentine SoilMTDRRGVIEAASFRLWFELLEETVAHDPDDIAPGNRWSAVILLHDLIGIGLRNGAVRPIVIHSSGPGSYAHLMFRYTLDPEFDWSGEIQLMLDRGVPANQTDLLIAEVEAATGIAEHEDDE*
Ga0126308_1013564033300010040Serpentine SoilMTDRRRVIEAASFRLWFELLEETVAHEPDDIAPGNRWSAVILLHELIGIGLRNGAVRPIVIHSSGPVSHAHLMFRYTLDPEFDWSGEMQLAADSGDAAIQSDLLVAEIEAATGITEHEDDE*
Ga0126308_1014848423300010040Serpentine SoilVIDQRHSVKAAIFRVWYELLEETVGHDPDEIAPGNRWSAVILLHDLIGIGLRNGAVRPIVIHSSGPGSYAHLMFRYTLDPEFDWSGEIQLPPGRGDPASQSDLLVAEVEAATGIAEHDDDE*
Ga0126308_1036007123300010040Serpentine SoilMDQHRTVEAATFRLWYELLEETVGHDPDEIAPGNRWSAVILLHDLIGVGLRNGAIRPIVIHSSGPGSYAHLMFRYTLDPEFDWRGEIQLVLDRGDPETQPDLLIAEVAAATGVTEHEDDG
Ga0126308_1040032933300010040Serpentine SoilVTEQRRRVQAATFRAWYELLEETVAHDPDEIAPRNKWSAVILLHELIGVGVRGGVVRPIVIHSSGPSSYAHLMFRYVLEPEFDWSGEIPLAPERGQAATWLDRFVTEIEAATGIAEHEDDERD*
Ga0126312_1014565023300010041Serpentine SoilMTDRRRIIKAASFRLWFELLEETVAHEPDDIAPGNRWSAVILLHELIGIGLRNGAVRPIVIHSSGPVSHAHLMFRYTLDPEFDWSGEMQLAADSGDAAIQSDLLVAEIEAATGITEHEDDE*
Ga0126312_1025222813300010041Serpentine SoilVPDQRHNVQAVTFRAWYELLEGTVAHDPDEIAPGNQWSAMILLHELTGVGMRNGAIRPIVIHSSGPSSYAHLMFRYVLEPRFDWSGEIQLVLDRGETATWADRFVAEIEAATGIAEHEDDERD*
Ga0126312_1032396923300010041Serpentine SoilVIDQRHSVKAAIFRVWYELLEETVGHDPDEIAPGNRWSAMILLHDLIGIGLRNGAVRPIVIHSSGPGSYAHLMFRYTLDPEFDWSGEIQLPPDRGDPASQSDLFIAEVEAATGIAEHEDDE*
Ga0126314_1002522223300010042Serpentine SoilMDQHRTVEAATFRLWYELLEETVGHDPDEIAPGNRWSAVILLHDLIGVGLRNGAIRPIVIHSSGPGSYAHLMFRYTLDPEFDWSGEIQLVLDRGDPETQPDLLIAEVAAATGVTEHEDDGRR*
Ga0126314_1024033823300010042Serpentine SoilVWYELLEETVGHDPDEIAPGNRWSAVILLHDLIGIGLRNGAVRPIVIHSSGPGSYAHLMFRYTLDPEFDWSGEIQLMLDRGVPAIQTDLLVAEVETATGIAEHEDEQH*
Ga0126314_1094194313300010042Serpentine SoilDRCRALARALAGAACMTEKRRSVNAATFRLWFELLEETVAHDPDEIATGNRWSAVILLHELIGIGLHSGAIHPIVIHSSGPSSFAHLMFRYTLEPDFDWSGEIQLAPEGGEAASWPDLLLAEIEAATGIVEHEDDERD*
Ga0126314_1111252213300010042Serpentine SoilVWYELLEETVAHDMDDLAPGNQWSAVILLHDLIGIGVRSGAIRPIVIHSSGPSSYAHLMFRYILEPEFDWGGEIQLVPDRGEAATWADRFVAEIEAATGIAEHEDDERD*
Ga0126310_1013989733300010044Serpentine SoilVTDQRRRVQAATFRAWYELLEETVAHDPDEIAPGNQWSAVILLHELIGVGVRGGAIRPIVIHSSGPSSYAHLMFRYVLEPEFDWSGEIQLAPERAQAATWLDRFVTEIEAATGIAEHEDDERD*
Ga0126310_1014182623300010044Serpentine SoilVTDQRHSVQAVTFRAWYELLEETVAHDPDEIAPGNQWRAMILLHELTGVGMRNGAIRPIVIHSSGPGSYAHLMFRYVLEPEFDWSGEIQLVLDRGETATWPDRFVAEIEAATGMAEHEDDERD*
Ga0126310_1028184613300010044Serpentine SoilVWYELLEETVGHDPDEIAPGNRWSAVILLHDLIGIGLRNGAVRPIVIHSSGPGSYAHLMFRYTLDPEFDWSGEIQLPPGRGDPASQSDLLVAEVEAATGIAEHEDDE*
Ga0126310_1110043923300010044Serpentine SoilVTDQRHWVQAATFRAWYELLEETVAHDPDEIAPGNQWSAVVLLHELIGVGMRNGAIHPIVIHSSGPSSYAHLMFRYELEPEFDWSGEIQLVPDRGEAATWSNGFVAGI
Ga0126310_1123372313300010044Serpentine SoilMDQHRTVEAATFRLWYELLEEAVGHDPDDVASGNRWSAVILLNDLIGVGLRNGAIRPIVIHSSGPGSYAHLMFRYTLDSEFDWNGEIQFSLDRGDSATQPDLLIAEIAAATGIAEHED
Ga0126311_1012089013300010045Serpentine SoilVTDQRHNVQAVTFRAWYELLEETVAHDPDEIAPGNQWSAMILLHELTGVGMRNGAIRPIVIHSSGPGSYAHLMFRYVLEPEFDWSGEIQLVLDRGETATWADRFVAEIEAATGIAEHEDDERD*
Ga0126311_1012416923300010045Serpentine SoilMDQHRTVEAATFRLWYELLEETVGHDPDEIAPGNRWSAVILLHDLIGVGLRNGAIRPIVIHSSGPGSYAHLMFRYTLDPEFDWSGEIQLVLDRGDPETQPDLLIAEVAAATGVTEHEDDG
Ga0126311_1037624323300010045Serpentine SoilVTEQRRSVNAATFRVWYELLEEAVAHDPDEIAPGNRCNAVILLHELIGVGVRSGAIRPIVIHSSGPSSYAHLMFRYTLNPDFDWSREIEIGPDHGSAATWPDLLVAEIEAATGIAEHEDDLRD*
Ga0126311_1152572423300010045Serpentine SoilQRRGVNAATFRLWFELLEETVAHDPDEIAAGNRWSAVILLHELIGIGLHSGAIHPIVIHSSGPSSFAHLMFRYTLEPEFDWSGEIQLVPEGGEAASWPDLLVAEIEAATGIVEHEDGERD
Ga0126311_1168000423300010045Serpentine SoilLRNDRLALAAAHVTDQRHWVQAATFRAWYELLEETVAHDPDEIAPGNQWSAVVLLHELIGVGMRNGAIHPIVIHSSGPSSYAHLMFRYDLEPEFDWSGEIQLVPDRGEAATWSNGFVAGIEAATGIAAHEDGQRD*
Ga0126323_100374923300010137SoilMDQHRTVEAATFRLWYELLEEAVGHDPDDVAPGNRWSAVILLHDLIGIGLRTGAIRPIVIHSSGPGSYAHLMFRYTLDPDFDWSGEIQLMLDRGDPATQLDQLIAEVAAATGTAEHEDDG
Ga0126306_1016425933300010166Serpentine SoilMIDRRRTVKAATYRVWYELLEETVGHDPDDIAPGNRWSAVILLHELIGIGLHNGAIRPIVIHSSGPGSYAHLMFRYTLDSEFDWSGEIQLVPDRGDAATHPDLLVAEIEAVTGIAEHENDERD*
Ga0126306_1048413013300010166Serpentine SoilVIDQRHSVKAAIFRVWYELLEETVGHDPDEIAPGNRWSATILLHDLIGIGLRNGAVRPIVIHSSGPGSYAHLMFRYTLDPEFDWSGEIQLPPGRGDPASQSDLLVAEVEAATGIAEHEDDE*
Ga0126306_1065069113300010166Serpentine SoilVTGPQRTISAAIFKAWYEELEAIVAQDPDDVAPGNQQSAVMLLHDLTGVGLRSGAVLPVVIHSSGPSSHAHLMFRYTLDPAFDWSGEIQFAADRGDAATRFDLLIAEVAAATGVPEREDDERD*
Ga0126306_1068593713300010166Serpentine SoilMMDQRRTIKAATFRVWYELLEETVGHDPDEIAPGNRWSAVILLHDLIGVGLRSGAIRPIVIHSSGPGSYAHLMFRYTLDPEFDWSGEISLMLDREDPATQPDLLIAEVAAATGFAEHEDDE*
Ga0150985_10191587023300012212Avena Fatua RhizosphereVTDQRHWVQAATFRAWYELLEETVAHDPDEIAPGNQWSAVVLLHELIGVGMRNGAIHPIVIHSSGPSSYAHLMFRYDLEPEFDWSGEIQLVPDRGEAATWSNGFVAGIEAATGIAAHEDGQRD*
Ga0150985_10478902523300012212Avena Fatua RhizosphereVRDQRRSVKAATFRLWYELLEETVGHDPDEIAPGNRRSAVILLHDLIGVGLRNGAIRPIVIHSSGPGSYAHLMFRYTLDPVFDWSGEIELVLDRGDPVTQPDLLIAEVAAATGIPEHEDDQ*
Ga0150985_11757959823300012212Avena Fatua RhizosphereMTDQRRWVQAATFRVWYELLEETVTHDPDEIAPGNQWSAVVLLHELIGAGIRNGAIHPIVIHSSGPSSYAHLMFRYTLEPEFDWSGEIQLVPAPGETATWPDGFVAEIEA
Ga0150985_11834641643300012212Avena Fatua RhizosphereVTGQRPSTQAATFRAWYELLEETVAHDPDEIAPGNQWSAAVLLHDLIGVGMCNGAIRPIIIHSSGPSSYAHLMFRYVLEPEFDWSSEIQLVPHRGEAATWPDRFVAEIEASTGMAEHEDDERN*
Ga0150985_12099642523300012212Avena Fatua RhizosphereVTDQRRSANAATFRVWYELLEESVAHDPDEIAPGNQWSAVILLHELIGVGMRNGAIRPIVIHSSGPSSYAHLMFRYALEPEFDWSGEIQIGPDRGQAAIWPDLFVAEIEAATGMAAHEDDERN*
Ga0150984_10103835023300012469Avena Fatua RhizosphereVTGQRPSIQAATFRAWYELLEETVANDPDEIAPGNQWSAVVLLHELIGVGMLNGAIRPIIIHSSGPSSHAHLMFRYALEPEFDWSGEIQLVPDGREAATWPDLFVAEIEAATSIAAHEDDQRD*
Ga0150984_10164837823300012469Avena Fatua RhizosphereVTGQRPSTQAATFRAWYELLEETVAHDPDEIAPGNQWSAAVLLHDLIGVGMCNGAIRPIIIHSSGPSSYAHLMFRYVLEPEFDWSSEIQLVPHRGEAATWPDRFVAEIEAATGMAEHEDDERN*
Ga0136612_1053255113300012680Polar Desert SandMTDRQRTVKAATFRAWYEVLEAIVAQDPDDVAPGNRQSAVILLHDLLGIGFHNGAVRPVVIHSSGPGSHAHLMFRYTLEPGFDWSGEIALGRESGFTTIRPDLLIAEIAAATGITAHEDD
Ga0136613_1023158513300012681Polar Desert SandMTGEPRTVAAATFRVWYELLEETVAHDPDETAPGNQRSAVILLHDLVGVGLHSGAIHPVVIHSSGPGSFAHLMFRYMLNPEFDWSGEIALAPGPADDLARPDRLIAELAAATGIPVGES*
Ga0136614_1036016423300012684Polar Desert SandMTGEPRTVAAATFRVWYELLEETVAHDPDETAPGNQRSAVILLHDLVGVGLHSGAIHPVVIHSSGPGSFAHLMFRYMLNPEFDWSGEIALAPGPADDLARPDRLIAELAAATGILVDES*
Ga0075327_120955413300014272Natural And Restored WetlandsMPVNPGRTVQAAIFRTWYELVDEIVAHDPEEVAPGNRCSAIILLHELIGIGLRHGAIRAVVIHSSGPSSYAHLMFRYTLNPEFDWNGEISLASDPGDDITRLDRLVTELETATGIPEREDD*
Ga0132258_1230873523300015371Arabidopsis RhizosphereVRVTDQRRSVNAATFRVWYELLEESVAHDPEEIAPGNQWSAVILLHELIGVGMRSGAIRPIVIHSSGPSSYAHLMFRYALEPEFDWNGEIQLDPDRGQAATWPNLFVAEIEAATGIAEHEHDERD*
Ga0132257_10370864123300015373Arabidopsis RhizosphereVWYELLEETVAHDPDEIAPGNQWSAMVLLHELIGVGMRSGAIRPIVIHSSGPSSYAHLMFRYALEPEFDWNGEIQLDPDRGQAATWPNLFVAEIEAATGIAEHEHDERD*
Ga0183260_1026455313300017787Polar Desert SandTFRVWYELLEESVAHDPDETAPGNQRSAVILLHDLVGVGLHSGAIHPVVIHSSGPGSFAHLMFRYMLNPEFDWSGEIALAPGPADDLARPDRLIAELAAATGIPVGES
Ga0136617_1002390953300017789Polar Desert SandMTGEPRTVAAATFRVWYELLEETVAHDPDETAPGNQRSAVILLHDLVGVGLHSGAIHPVVIHSSGPGSFAHLMFRYMLNPEFDWSGEIALAPGPADDLARPDRLIAELAAATGIPVGES
Ga0190265_1308390513300018422SoilTRSARHTRVSGEPRTVGAGMFRLWFELLEDLVSHDPEETAPGNLRSAVILLHDLVGVGLRAGAIRAVVIHSSGPSSFAHLMFRYTLNPDFDWNGEIILAPEMEDDRHHSDRLIAEIIAATGMPRHDDA
Ga0190268_1015567423300018466SoilMTGQRRTVKAATFRIWYELLEETVGHDPDDIAPGNRWSAVILLHELIGIGLRNGAIRPIVIHSSGPGSYAHLMFRYTLDSEFDWSGEIQLVPDRGDAATHPDLLVAEIEAATGIAEHEDDERD
Ga0190270_1288706923300018469SoilMTGQRRTVKAATFRIWYELLEETVGHDPDDIAPGSRWSAVILLHELIGIGLRNGAIRPIVIHSSGPGSYAHLMFRYTLDPEFDWSGEMQLAADSGDAAIQSDLLVAE
Ga0190274_1376240813300018476SoilLLGAHGLALAAARVTDQRHSVQAVIFRAWYELLEETVAHDPDEIAPGNQWSAMILLHELTGVGMRNGAIRPIVVHSSGPSSYAHLMFRYVLEPEFDWSGEIQLVLDRGETATRPDRFVAEIEAATGMAEHEDDERD
Ga0184641_122203413300019254Groundwater SedimentRVVNRRRSVKAATFRLWYQLLEETVGHDPDVVAAGNRWSAVILLHDLIRVGLRSGAIRPIVIHSSGPGSYAHLMFRYTLDSDFDWSGEIQFMLDRGDPATLPDLLIAEIAAATGIAEHEDDV
Ga0209485_117566423300027691Agricultural SoilVTDQQRTVAAATFRVWYELLEETVGHDPDDVAPGNRWSAVILLHDLIGIGLRQGAIRPIVIHSSGPGSYAHLMFRYTLDPAFDWSGEIQLAADRGDAATRLDLLIAEVAAAT
Ga0247719_109296813300028041SoilMTDRQPSVKAATFRVWYELLEETVGHDPEEIAPGNRWSAVILLHELIGVGLRNDAIRPIVIHSSGPGSYAHLMFRYAQNPEFDWSGEIQLVPDRGDATTRSD
Ga0247822_1094741823300028592SoilVNPGRTVQAAIFRTWYELVDETVAHDPEEVAPGNRCSAIILLHELIGIGLRHGAIRAVVIHSSGPSSYAHLMFRYTLNPEFDWNGEISLASDSGDDITRLDRLVTELETATCIPECEDD
Ga0308203_101903223300030829SoilMTDHRRSVRAATFRVWYELLEETVAHDPDDIAPGNLRSAVNLLHELIGAGVRNGAIRPVVIHSSGPSSYAHLMFRYTLDSDFDWSGEIQFMLDHGDPATQPDLLIAEIAAATGIAEREDDASG
Ga0308205_103099923300030830SoilMDQHRTVEAATFRLWYELLEEAVGHDPDDVAPGNRWSAVILLHDLIGIGLRTGAIRPIVIHSSGPGSYAHLMFRYTLDPDFDWSGEIQLMLDRGDPATQLDLLIAEVATATGTAEHED
Ga0308202_102157223300030902SoilLLGAHGLALAAARVTDQRHSVQAVIFRAWYELLEETVAHDPDEIAPGNQSSAVVLLHELIGVGMRNGAIRPTVIHSSGPSSYAHLMFRYALEPEFDWSSEIQLVPDRGEAATWLDGFVAEIEAATGIAAHEDDQRD
Ga0308202_102334623300030902SoilMTDHRRSVRAATFRVWYELLEETVAHDPDDIAPGNLRSAVNLLHELIGAGVRNGAIRPVVIHSSGPSSYAHLMFRYTLDPEFDWGGEIQLVPERGKAATWPDLLVTEIEAATGIAEHEADERN
Ga0308206_105770313300030903SoilVIDQRRSVKAATFRLWYELLEETVGHDPDDIAPGNRWSAVILLHDLIRVGLRNGAIRPIVIHSSGPGSYAHLMFRYTLDPEFDWSGEIQFILDHGDSATQSDLLIAEIAAATGITAHEDD
Ga0308206_107784613300030903SoilMTDRRRIIKAASFRLWFELLEDAVTHDPDDVAPGNCWSAVILLHDLIGISLRNGAVRPIVIHSSGPTSHAHLMFRYTLDPEFDWSGEIQLAADSGDTMIPSDLLVAEIEAVSG
Ga0308206_113493423300030903SoilMDQHRTVEAATFRLWYELLEEAVGHDPDDVAPGNRWSAVILLHDLIGIGLRTGAIRPIVIHSSGPGSYAHLMFRYTLDPDFDWSGEIQLMLDRGDPATQLDQLIVEVAAATGTAEHEDDG
Ga0308200_102403123300030905SoilVTDQRRRVQAATFRAWYELLEETVAHDPDEIAPGNQSSAVVLLHELIGVGMRNGAIRPTVIHSSGPSSYAHLMFRYALEPEFDWSSEIQLVPDRGEAATWLDGFVAEIEAATGIAAHEDDQRD
Ga0308189_1001955823300031058SoilVTDQRRRVQAATFRAWYELLEETVAHDPDEIAPGNQWSAVVLLHELIGAGVRNGAIRPIVIHSSGPSSYAHLMFRYALEPEFDWSGEIQLVPDRGEAAPWPDGFVAEIDAATGIAAHVDDQRE
Ga0308189_1004337223300031058SoilVTDQRRRVQAATFRAWYELLEETVAHDPDEIAPGNQSSAVVLLHELIGVGMRNGAIRPTVIHSSGPSSYAHLMFRYALEPEFDWSGEIQLVPDRGEAATWPNGFVAEIEAATGIAAHEDDQRD
Ga0308189_1055047913300031058SoilVIDQRRSVNAATFRVWYELLEETVGHDPDEIAPGNRWSAVILLHDLIGIGLRNGAVRPIVIHSSGPGSYAHLMFRYTLDPEFDWSGEIQLTPDRGVPAIQTDLLVAEVEAATGVA
Ga0308201_1009735913300031091SoilMTDPRRSVRAATFRVWYELLEETVAHDPDDIAPGNLRSAVNLLHELIGAGVRNGAIRPVVIHSSGPSSYAHLMFRYTLDPEFDWGGEIQLVPERGKAATWPDLLVTEIEAATGIAEHEADERN
Ga0308204_1006035123300031092SoilVIDQRRSVNAATFRVWYELLEETVGHDPDDVAPGNRWSAVILLHDLIRVGLRSGAIRPIVIHSSGPGSYAHLMFRYTLDSDFDWSGEIQFMLDHGDPATQPDLLIAEVAAATGIAEHEDD
Ga0308204_1007645923300031092SoilMDQHRTVEAATFRLWYELLEEAVGHDPDEIAPGNRWSAVILLHDLIGVGLRNGAIRPIVIHSSGPGSYAHLMFRYTLDPDFDWSGEIQLMLGRGDPATQLDQLIAEVAAATGTAEHEDDG
Ga0308204_1030266623300031092SoilVTDQRRRVQAATFRAWYELLEETVAHDPDEIAPGNQWSAVVLLHELIGAGVRNGAIRPIVIHSSGPSSYAHLMFRYALEPEFDWSSEIQLLPDRGEAATWR
Ga0307410_1019490743300031852RhizosphereVIDKRRSVKAATFRLWYELLEETVGHDPNDVAPGNRWSAVILLHDLIGIGLRNGAIRPIVIHSSGPGSYAHLMFRYTLDPEFDWSGEIQFMLDHGDLGTQPDLLIAEIAAATGIDEHEDD
Ga0307410_1074329923300031852RhizosphereMDQRRTVEAATFRLWYELLEETVGHDPNEIAPGNRWSALILLHDLIGVGLRNGAIRPIVIHSSGPGSYAHLMFRYTLDPEFDWSGEIQLMLDRGDPATQPDLLIAEVAAAIGIAEHEDDE
Ga0307407_1116582713300031903RhizosphereVIDKRRSVKAATFRLWYELLEETVGHDPNDVAPGNRWSAVILLHDLIGIGLRNGAIRPIVIHSSGPGSYAHLMFRYTLDPEFDWSGEIQFMLDHGDLGTQP
Ga0307412_1028487523300031911RhizosphereMDQRRTVEAATFRLWYELLEETVGHDPNEIAPGNRWSALILLHDLIGVGLRNGAIRPIVIHSSGPGSYAHLMFRYTLDPEFDWSGEIQLMLDRRDPATQPDLLIAEVAAAIGIAEHEDDE
Ga0307412_1100307323300031911RhizosphereVIDKRRSVKAATFRLWYELLEETVGHDPDEVAPGNRWSAVILLHDLISIGLRNGAIRPIVIHSSGPGSYAHLMFRYTLDPEFDWSGEIQLSPDRGDPASKSDLLVAEV
Ga0308175_10154477013300031938SoilVTDQRRSVKAATFRLWYELLEETVGHDPDEIAPGNRWSAVILLHDLIGVGLRNGAIRPIVIHSSGPGSYAHLMFRYTLDPEFDWSGEIQLMLDRGDPATRPDLLMAEIAAATGIAEHEDD
Ga0307409_10027484023300031995RhizosphereVIDKRRSVKAATFRLWYELLEETVGHDPDDVAPGNRWSAVILLHDLISIGLRNGAIRPIVIHSSGPGSYAHLMFRYTLDPEFDWSGEIQFMLDHGDLGTQPDLLIAEIAAATGIAEHEDD
Ga0307409_10045456513300031995RhizosphereRHALAAARMMDQRRTVEAATFRLWYELLEETVGHDPDEIAPGNRWSALILLHDLIDVGLRNGAIRPIVIHSSGPGSYAHLMFRYTLDPEFDWSGEIQLMLDRGAPATQPDLLIAEVAAATGIAEHENDE
Ga0307416_10077026423300032002RhizosphereMMDQRRTVGATTFRLWYELLEETVGHDPDEIAPGNRWSALILLHDLIDVGLRNGAIRPIVIHSSGPGSYAHLMFRYTLDPEFDWSGEIQLMLDRGAPATQPDLLIAEVAAATGIAEHEND
Ga0307414_1111891323300032004RhizosphereMMDQRRTVEAATFRLWYELLEETVGHDPDEIAPGNRWSAVILLHDLIGVGLRNGAIRPIVIHSSGPGSYAHLMFRYTLDPEFDWSGEIQLPLDRGVPAIQTDLLVAEVEAATGVAEHEDD
Ga0307415_10019649213300032126RhizosphereVIDQRRSVKAATFRLWYELLEETVGHDPDDVAPGNRWSAVILLHDLISIGLRNGAIRPIVIHSSGPGSYAHLMFRYTLDPEFDWSGEIQFMLDHGDLGTQPDLLIAEIAAATGIAEHEDD
Ga0268251_1013137823300032159AgaveVWYELLEEMVGHDPDDIAPGNRWSAVILLHELIGVGLRNGAVRPIVIHSSGPGSYAHLMFRYTLDPEFDWGGEIQLATFLRSGASWPDLLIAEVAAATGIAEHGNDERG

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.