NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F096787

Metagenome / Metatranscriptome Family F096787

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F096787
Family Type Metagenome / Metatranscriptome
Number of Sequences 104
Average Sequence Length 52 residues
Representative Sequence MTDNNELNLTTHRASASVWDRRGWDGTRERLAMTRWLLGIGGCALALQGVRQ
Number of Associated Samples 92
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 52.43 %
% of genes near scaffold ends (potentially truncated) 99.04 %
% of genes from short scaffolds (< 2000 bps) 97.12 %
Associated GOLD sequencing projects 88
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (98.077 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere
(10.577 % of family members)
Environment Ontology (ENVO) Unclassified
(36.538 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(53.846 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 37.50%    β-sheet: 0.00%    Coil/Unstructured: 62.50%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF01725Ham1p_like 20.19
PF12704MacB_PCD 0.96
PF01035DNA_binding_1 0.96
PF08543Phos_pyr_kin 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG0127Inosine/xanthosine triphosphate pyrophosphatase, all-alpha NTP-PPase familyNucleotide transport and metabolism [F] 20.19
COG0350DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)Replication, recombination and repair [L] 0.96
COG0351Hydroxymethylpyrimidine/phosphomethylpyrimidine kinaseCoenzyme transport and metabolism [H] 0.96
COG0524Sugar or nucleoside kinase, ribokinase familyCarbohydrate transport and metabolism [G] 0.96
COG2240Pyridoxal/pyridoxine/pyridoxamine kinaseCoenzyme transport and metabolism [H] 0.96
COG2870ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferaseCell wall/membrane/envelope biogenesis [M] 0.96
COG3695Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domainTranscription [K] 0.96

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.08 %
UnclassifiedrootN/A1.92 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2140918013|NODE_10738_length_1306_cov_6.866769All Organisms → cellular organisms → Bacteria → Acidobacteria1338Open in IMG/M
3300002568|C688J35102_118018602All Organisms → cellular organisms → Bacteria → Acidobacteria523Open in IMG/M
3300004114|Ga0062593_103141226All Organisms → cellular organisms → Bacteria → Acidobacteria529Open in IMG/M
3300004157|Ga0062590_102084347All Organisms → cellular organisms → Bacteria → Acidobacteria591Open in IMG/M
3300004157|Ga0062590_102228333All Organisms → cellular organisms → Bacteria → Acidobacteria574Open in IMG/M
3300004480|Ga0062592_101758547All Organisms → cellular organisms → Bacteria → Acidobacteria605Open in IMG/M
3300004643|Ga0062591_100974378All Organisms → cellular organisms → Bacteria → Acidobacteria804Open in IMG/M
3300004643|Ga0062591_102043729All Organisms → cellular organisms → Bacteria → Acidobacteria592Open in IMG/M
3300005294|Ga0065705_10869586All Organisms → cellular organisms → Bacteria → Acidobacteria586Open in IMG/M
3300005334|Ga0068869_100099219All Organisms → cellular organisms → Bacteria → Acidobacteria2201Open in IMG/M
3300005344|Ga0070661_101670324All Organisms → cellular organisms → Bacteria → Acidobacteria539Open in IMG/M
3300005353|Ga0070669_100207174All Organisms → cellular organisms → Bacteria → Acidobacteria1545Open in IMG/M
3300005446|Ga0066686_10177319All Organisms → cellular organisms → Bacteria → Acidobacteria1420Open in IMG/M
3300005459|Ga0068867_100277896All Organisms → cellular organisms → Bacteria → Acidobacteria1372Open in IMG/M
3300005468|Ga0070707_100501117All Organisms → cellular organisms → Bacteria → Acidobacteria1176Open in IMG/M
3300005534|Ga0070735_10805699All Organisms → cellular organisms → Bacteria → Acidobacteria553Open in IMG/M
3300005535|Ga0070684_100731444All Organisms → cellular organisms → Bacteria → Acidobacteria923Open in IMG/M
3300005536|Ga0070697_100299585All Organisms → cellular organisms → Bacteria → Acidobacteria1382Open in IMG/M
3300005544|Ga0070686_100172967All Organisms → cellular organisms → Bacteria → Acidobacteria1529Open in IMG/M
3300005556|Ga0066707_10258738All Organisms → cellular organisms → Bacteria → Acidobacteria1137Open in IMG/M
3300005615|Ga0070702_100564878All Organisms → cellular organisms → Bacteria → Acidobacteria847Open in IMG/M
3300005617|Ga0068859_102319457All Organisms → cellular organisms → Bacteria → Acidobacteria592Open in IMG/M
3300005713|Ga0066905_100854596All Organisms → cellular organisms → Bacteria → Acidobacteria793Open in IMG/M
3300005719|Ga0068861_100216431All Organisms → cellular organisms → Bacteria → Acidobacteria1616Open in IMG/M
3300005719|Ga0068861_101524345All Organisms → cellular organisms → Bacteria → Acidobacteria656Open in IMG/M
3300005764|Ga0066903_102036695All Organisms → cellular organisms → Bacteria → Acidobacteria1103Open in IMG/M
3300005764|Ga0066903_106002638All Organisms → cellular organisms → Bacteria → Acidobacteria636Open in IMG/M
3300005841|Ga0068863_100296440All Organisms → cellular organisms → Bacteria → Acidobacteria1568Open in IMG/M
3300005843|Ga0068860_101172121All Organisms → cellular organisms → Bacteria → Acidobacteria788Open in IMG/M
3300005844|Ga0068862_101070047All Organisms → cellular organisms → Bacteria → Acidobacteria800Open in IMG/M
3300006049|Ga0075417_10535104All Organisms → cellular organisms → Bacteria → Acidobacteria591Open in IMG/M
3300006854|Ga0075425_101489028All Organisms → cellular organisms → Bacteria → Acidobacteria764Open in IMG/M
3300006864|Ga0066797_1232501All Organisms → cellular organisms → Bacteria → Acidobacteria643Open in IMG/M
3300006871|Ga0075434_101461464All Organisms → cellular organisms → Bacteria → Acidobacteria693Open in IMG/M
3300006903|Ga0075426_10253749All Organisms → cellular organisms → Bacteria → Acidobacteria1281Open in IMG/M
3300006914|Ga0075436_100707406All Organisms → cellular organisms → Bacteria → Acidobacteria746Open in IMG/M
3300006953|Ga0074063_10854783All Organisms → cellular organisms → Bacteria → Acidobacteria742Open in IMG/M
3300007004|Ga0079218_13326123All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300007076|Ga0075435_101387177All Organisms → cellular organisms → Bacteria → Acidobacteria616Open in IMG/M
3300009038|Ga0099829_11496192All Organisms → cellular organisms → Bacteria → Acidobacteria557Open in IMG/M
3300009101|Ga0105247_11080898All Organisms → cellular organisms → Bacteria → Acidobacteria632Open in IMG/M
3300009137|Ga0066709_101174715All Organisms → cellular organisms → Bacteria → Acidobacteria1130Open in IMG/M
3300009137|Ga0066709_104439642All Organisms → cellular organisms → Bacteria → Acidobacteria512Open in IMG/M
3300009162|Ga0075423_11236909All Organisms → cellular organisms → Bacteria → Acidobacteria797Open in IMG/M
3300009177|Ga0105248_11204748All Organisms → cellular organisms → Bacteria → Acidobacteria856Open in IMG/M
3300009553|Ga0105249_10349739All Organisms → cellular organisms → Bacteria → Acidobacteria1497Open in IMG/M
3300009553|Ga0105249_10982657All Organisms → cellular organisms → Bacteria → Acidobacteria913Open in IMG/M
3300009661|Ga0105858_1262844All Organisms → cellular organisms → Bacteria → Acidobacteria529Open in IMG/M
3300010036|Ga0126305_11138102All Organisms → cellular organisms → Bacteria → Acidobacteria538Open in IMG/M
3300010362|Ga0126377_11356262All Organisms → cellular organisms → Bacteria → Acidobacteria784Open in IMG/M
3300010366|Ga0126379_12475100All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300010375|Ga0105239_13265825All Organisms → cellular organisms → Bacteria → Acidobacteria528Open in IMG/M
3300010397|Ga0134124_11621532All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. HMWF008678Open in IMG/M
3300010399|Ga0134127_11007063All Organisms → cellular organisms → Bacteria → Acidobacteria893Open in IMG/M
3300010403|Ga0134123_11625994All Organisms → cellular organisms → Bacteria → Acidobacteria694Open in IMG/M
3300012203|Ga0137399_10556074All Organisms → cellular organisms → Bacteria → Acidobacteria964Open in IMG/M
3300012204|Ga0137374_10888141All Organisms → cellular organisms → Bacteria → Acidobacteria656Open in IMG/M
3300012204|Ga0137374_11140043All Organisms → cellular organisms → Bacteria → Acidobacteria551Open in IMG/M
3300012212|Ga0150985_120153632All Organisms → cellular organisms → Bacteria → Acidobacteria586Open in IMG/M
3300012356|Ga0137371_10521925All Organisms → cellular organisms → Bacteria → Acidobacteria916Open in IMG/M
3300012362|Ga0137361_11823374All Organisms → cellular organisms → Bacteria → Acidobacteria526Open in IMG/M
3300012929|Ga0137404_11633201All Organisms → cellular organisms → Bacteria → Acidobacteria598Open in IMG/M
3300012948|Ga0126375_10460201All Organisms → cellular organisms → Bacteria → Acidobacteria937Open in IMG/M
3300014968|Ga0157379_10568744All Organisms → cellular organisms → Bacteria → Acidobacteria1056Open in IMG/M
3300014968|Ga0157379_12602329All Organisms → cellular organisms → Bacteria → Acidobacteria507Open in IMG/M
3300015357|Ga0134072_10158280All Organisms → cellular organisms → Bacteria → Acidobacteria752Open in IMG/M
3300015372|Ga0132256_101623505All Organisms → cellular organisms → Bacteria → Acidobacteria756Open in IMG/M
3300015373|Ga0132257_102210526All Organisms → cellular organisms → Bacteria → Acidobacteria712Open in IMG/M
3300015373|Ga0132257_102626917All Organisms → cellular organisms → Bacteria → Acidobacteria655Open in IMG/M
3300015374|Ga0132255_103009304All Organisms → cellular organisms → Bacteria → Acidobacteria719Open in IMG/M
3300016341|Ga0182035_10274374All Organisms → cellular organisms → Bacteria → Acidobacteria1372Open in IMG/M
3300016445|Ga0182038_11298666All Organisms → cellular organisms → Bacteria → Acidobacteria650Open in IMG/M
3300018052|Ga0184638_1169219All Organisms → cellular organisms → Bacteria → Acidobacteria781Open in IMG/M
3300020581|Ga0210399_10613059All Organisms → cellular organisms → Bacteria → Acidobacteria900Open in IMG/M
3300021432|Ga0210384_11308681All Organisms → cellular organisms → Bacteria → Acidobacteria629Open in IMG/M
3300021560|Ga0126371_13791778Not Available509Open in IMG/M
3300022756|Ga0222622_10096186All Organisms → cellular organisms → Bacteria → Acidobacteria1810Open in IMG/M
3300025315|Ga0207697_10383560All Organisms → cellular organisms → Bacteria → Acidobacteria624Open in IMG/M
3300025912|Ga0207707_11210015All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300025917|Ga0207660_11266990All Organisms → cellular organisms → Bacteria → Acidobacteria599Open in IMG/M
3300025935|Ga0207709_11160657All Organisms → cellular organisms → Bacteria → Acidobacteria635Open in IMG/M
3300025941|Ga0207711_10216339All Organisms → cellular organisms → Bacteria → Acidobacteria1751Open in IMG/M
3300026035|Ga0207703_10606943All Organisms → cellular organisms → Bacteria → Acidobacteria1035Open in IMG/M
3300026035|Ga0207703_11896607All Organisms → cellular organisms → Bacteria → Acidobacteria572Open in IMG/M
3300026078|Ga0207702_12311089All Organisms → cellular organisms → Bacteria → Acidobacteria525Open in IMG/M
3300026089|Ga0207648_11084897All Organisms → cellular organisms → Bacteria → Acidobacteria751Open in IMG/M
3300026118|Ga0207675_101099979All Organisms → cellular organisms → Bacteria → Acidobacteria814Open in IMG/M
3300026118|Ga0207675_101957491All Organisms → cellular organisms → Bacteria → Acidobacteria604Open in IMG/M
3300026142|Ga0207698_10676056All Organisms → cellular organisms → Bacteria → Acidobacteria1025Open in IMG/M
3300026542|Ga0209805_1172174All Organisms → cellular organisms → Bacteria → Acidobacteria970Open in IMG/M
3300027874|Ga0209465_10301609All Organisms → cellular organisms → Bacteria802Open in IMG/M
3300027874|Ga0209465_10411258All Organisms → cellular organisms → Bacteria → Acidobacteria677Open in IMG/M
3300028380|Ga0268265_11475893All Organisms → cellular organisms → Bacteria → Acidobacteria683Open in IMG/M
3300031668|Ga0318542_10504493All Organisms → cellular organisms → Bacteria → Acidobacteria629Open in IMG/M
3300031770|Ga0318521_10516633All Organisms → cellular organisms → Bacteria → Acidobacteria718Open in IMG/M
3300031824|Ga0307413_12138102All Organisms → cellular organisms → Bacteria → Acidobacteria507Open in IMG/M
3300031859|Ga0318527_10400607All Organisms → cellular organisms → Bacteria → Acidobacteria585Open in IMG/M
3300031942|Ga0310916_10113604All Organisms → cellular organisms → Bacteria → Acidobacteria2193Open in IMG/M
3300032012|Ga0310902_10650181All Organisms → cellular organisms → Bacteria → Acidobacteria705Open in IMG/M
3300032174|Ga0307470_10178742All Organisms → cellular organisms → Bacteria → Acidobacteria1332Open in IMG/M
3300033289|Ga0310914_11802619All Organisms → cellular organisms → Bacteria → Acidobacteria516Open in IMG/M
3300033290|Ga0318519_10623692All Organisms → cellular organisms → Bacteria → Acidobacteria656Open in IMG/M
3300034149|Ga0364929_0253264All Organisms → cellular organisms → Bacteria → Acidobacteria593Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere10.58%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil7.69%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.73%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.73%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil5.77%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil4.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere4.81%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.85%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.88%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.88%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.88%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.88%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.88%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.92%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.92%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.92%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.96%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.96%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.96%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.96%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.96%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.96%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.96%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.96%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.96%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.96%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.96%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.96%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.96%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.96%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.96%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.96%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.96%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.96%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2140918013Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)EnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006864Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193EnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009661Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062EnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031859Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M
3300034149Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Iowa-Corn-GraphCirc_036308902140918013SoilMDEMGELNLTTHRAPTSVWDRRGWDGSRERVATTRMLLGVGGG
C688J35102_11801860213300002568SoilMHLPPNLHGFPAMTDTHGLNLTTHRAAESVWQRSGWDGTPEQLAMTRWLVGIGGGALALQGL
Ga0062593_10314122613300004114SoilMPPNLHLIGGMTDTNELNLTTHRAAESVWERSGWDGTREQLAITRWLVGIGGGALALQGL
Ga0062590_10208434713300004157SoilMNDNNELNLTTHRAAASVWDRRGWDGTRERMAVTRWLLGIGG
Ga0062590_10222833313300004157SoilMTENTRDLNLTMSTHRAPASVWERQGWDGSREPLALTRWLVGIGGAALAIQGMRQRTLVGGT
Ga0062592_10175854713300004480SoilMNDNNELNLTTHRAPASVWDRRGWDGTRERLAMTRWLLGIGGCAL
Ga0062591_10097437813300004643SoilMNETHGLNLTTHRAPASVWDRRGWDGTRAQLATTRWLLGVGGGALALQGLRQRS
Ga0062591_10204372923300004643SoilMNDNNELNLTTHRAAASVWDRRGWDGTRERMAVTRWLLGIGGC
Ga0065705_1086958623300005294Switchgrass RhizosphereMTDTRELNLTTHRAPESVWDRRGWDGSSERLTLTRWLVGIGGGALAIQGLRQRTVGG
Ga0068869_10009921913300005334Miscanthus RhizosphereMTDTHELNLTTHRAVESVWERSGWDGTREQLAVTRWLVGIGGGALALQGLRQRSI
Ga0070661_10167032423300005344Corn RhizosphereMTDNTADLNLTTATHRAPASVWERQGWDGSREPLALTRWLVGVGGAALAIQGLRQRTLIGGT
Ga0070669_10020717433300005353Switchgrass RhizosphereMTDNNELNLTTHRASASVWDRRGWDGTRERLAMTRWLLGIGGCA
Ga0066686_1017731913300005446SoilMTQPVSTRELNLTAHRAPASVWDRSGWDGTRERLTATRWLVGIGGSALA
Ga0070662_10039482533300005457Corn RhizosphereMAPLPPNLHHGEGMNETHGLNLTTHRAPASVWDRRGWDGTRAQLATTRWLLGVGGGALAL
Ga0068867_10027789613300005459Miscanthus RhizosphereMTDNNELNLTTHRASASVWDRRGWDGTRERLAMTRWLLGIGGCALALQGVRQKSITGGLL
Ga0070707_10050111743300005468Corn, Switchgrass And Miscanthus RhizosphereMEYTSGELNLTAITHRAPASVWDRDGWNGNRERLALTRWLVGLGGAALALEGVRQR
Ga0070735_1080569923300005534Surface SoilMTMTNNELNLTAHRDPASVWDKRGWDGTRNELAVTRWLVGVGGAALAIQGLRQRSAVGSM
Ga0070684_10073144423300005535Corn RhizosphereMTDTHGLNLTTHRAAESVWERSGWDGTREQLAMTHWLVGIGGGALALQGL
Ga0070697_10029958513300005536Corn, Switchgrass And Miscanthus RhizosphereMTEFSNAEGLNLTTHRAPASVWDRRGWDGTREQLALTRWLVGIGGGALAIQGLRQRTV
Ga0070686_10017296713300005544Switchgrass RhizosphereMTSTSDLNLATHRESASVWDRRGWDGTRERLTITRWLVGAGGGVLAIQGLRQRTVAGS
Ga0066707_1025873813300005556SoilMTKKDPSADGMNLTTHRGTTSVWNRRGWNGTAERLAVTRWLVGISGAAL
Ga0070702_10056487823300005615Corn, Switchgrass And Miscanthus RhizosphereMNDNNELNLTTHRASASVWDRRGWDGTRERLAMTRWLLGVGGSALALQGLRQKTAMGGL
Ga0068859_10231945713300005617Switchgrass RhizosphereMPPNLHLIRGMTDTNELNLTTHRAAESVWERSGWDGTREQLAITRWLVGIGGGAL
Ga0066905_10085459613300005713Tropical Forest SoilMNEISHAKGLNLATHRAPVSVWDRRGWDGTREQLTMTRWLIGVGGAALAIQGLRQKT
Ga0068861_10021643113300005719Switchgrass RhizosphereMNDNNELNLTTHRAPASVWDRRGWDGTRERLAMTRWLLGIGGCALALQGVRQKSMT
Ga0068861_10152434523300005719Switchgrass RhizosphereMTDNNELNLTTHRASASVWDRRGWDGTRERLAMTRWLLGIGGCALALQGVRQKSM
Ga0066903_10203669513300005764Tropical Forest SoilMTMNTTGLNLTNHRAATSVWDRRGWNGSTEFAVSRWLVGAGGAALVIQGVRY
Ga0066903_10600263823300005764Tropical Forest SoilMTESTLNLSTHRAANSVWERRGWDGNRRHQTVTRWLVGIGGGALAIQ
Ga0068863_10029644033300005841Switchgrass RhizosphereMTDTHGLNLTTHRAAESVWERSGWDGTREQLAVTRWLVGIGGGALALQG
Ga0068860_10117212113300005843Switchgrass RhizosphereMTEHELNLTTHRAAESVWKRSGWDGTREQLAMTRWLVGIGGGALAVQGLRQRRT
Ga0068862_10107004723300005844Switchgrass RhizosphereMTDNNELNLTTHRASASVWDRRGWDGTRERLAMTRWLLGIGGCALALQGVRQ
Ga0075417_1053510423300006049Populus RhizosphereMAQNSSELNLTTHRADSSVWDRRGWDGSREQLALTRWLVGVGGSLLAVEGLRRR
Ga0075425_10148902813300006854Populus RhizosphereMDATHELKNLTTHRTPVSVWDRRGWDGTREQLALTRWLVGIGGGALALQGL
Ga0066797_123250113300006864SoilMNHHTSDRELNLGTHRAPVSVWHRRGWDGTREQLTMARWLVGIGGGALVVQGMRQ
Ga0075434_10146146413300006871Populus RhizosphereMTTNTSGLNLTTHRAPASVWDRRGWDGTRRELALTRWLVGLGGTALAL
Ga0075426_1025374913300006903Populus RhizosphereMASPSELNLTTHRAPASVWDRRGWDGTPEQLAMTRWLVGIGGGALA
Ga0075436_10070740633300006914Populus RhizosphereMDATHELKNLTTHRTPISVWDRRGWDGTREQLALTRWLVGIGGGALALQGL
Ga0074063_1085478333300006953SoilMDVTPDLNLATHRESASVWDRRGWDGTRERLTLTRWLVGAGGGALV
Ga0079218_1332612313300007004Agricultural SoilMAISESVPHELNITSHRAPESIWDRRGWNGTPERLTMGRWLVGVGGGALAV
Ga0075435_10138717713300007076Populus RhizosphereMNEAHGLNLTTHRAPASVWDKRGWDGTREQLAMTRWLVGLGGTALA
Ga0099829_1149619223300009038Vadose Zone SoilMTDNQGLNLTTHRSPVSVWDRRGWDGTRDQLVLTRLLIGIGGGALALHGLRNRTVTGG
Ga0105247_1108089813300009101Switchgrass RhizosphereMNDNNELNLTTHRASASVWDRRGWDGTRERIAMTRWLVGIGGSALA
Ga0066709_10117471513300009137Grasslands SoilMTDFSHAEGLNLTTHRAPASVWDRRGWDGTREQLALTRWLVGIGGAALAVQ
Ga0066709_10443964223300009137Grasslands SoilMTDTLNLTTHRAAESVWDRRGWNGTREQLAITRWLLGIGGSAL
Ga0075423_1123690913300009162Populus RhizosphereMTTNTSGLNLTTHRAPASVWDRRGWDGTRRELALTRWLVGLGGTSLALQGMRQKSVS
Ga0105248_1120474823300009177Switchgrass RhizosphereMNDNNELNLTTHRASASVWDRRGWDGTRERLAMTRWLLGVGGSALALQGLR
Ga0105249_1034973933300009553Switchgrass RhizosphereLHLIRGMTDTNELNLTTHRAAESVWERSGWDGTREQLAITRWLVGIGGGALALQGLRQ
Ga0105249_1098265723300009553Switchgrass RhizosphereMNDNNELNLTTHRASASVWDRRGWDGTRERIAMTRWLVGIGGSALALQG
Ga0105858_126284413300009661Permafrost SoilMTDNHGLNLTPHRTPVSVWDRRGLDGTREQLAMTRWLLGVGGGALALQGLRQRGIVGS
Ga0126305_1113810223300010036Serpentine SoilMDQPTRGSSSGDLNLTTHRAETSVWDRRGWDGTRELETTRWLVGVGGGALAIEG
Ga0126377_1135626213300010362Tropical Forest SoilMTDHSDLNLTTHRDPNSVWNRRGWDGTRQQLALTRWLVGIGGV
Ga0126379_1247510013300010366Tropical Forest SoilMNLSTHRAPTSVWDKRGWDGTRERLVLTRWLVGIGGG
Ga0105239_1326582533300010375Corn RhizosphereMTSNSDLNLATHRDATSVWDRRGWDGTRERLAITRWLVGAGGGALAIQGLRQ
Ga0134124_1162153213300010397Terrestrial SoilMADMQELNLTTHRAPESVWERRGWDGTRERIAMTRWLVGVGGGALALQGLR
Ga0134127_1100706323300010399Terrestrial SoilMTDNHRLNLATHRSPNSVWERSGWDGTREQLATTRWLVGIGGAALAVQGLRQRSITGSL
Ga0134123_1162599413300010403Terrestrial SoilMNNNFKNSDLNLTTHRSTSSVWERRGWDGTREPALTRWLVGIGGGALAVEGIRRRGV
Ga0137399_1055607433300012203Vadose Zone SoilMTETHGLNLTTHRAPASVWDRRGWDGTREQLTMTRWLVGIGGGALAL
Ga0137374_1088814113300012204Vadose Zone SoilMIDMAQSSDLNLTAGTHRAPASVWDRAGWDGTPQPLALTRWLVGIGGAALAL
Ga0137374_1114004313300012204Vadose Zone SoilMSEISRGIDSELNLATHRASVSVWDRRGWDGTREQIALTRWLVGAGGAALAVQGLRQRS
Ga0150985_12015363213300012212Avena Fatua RhizosphereMNETHGLNLTTHRAPASVWDRRGWDGTREQLATTRWLLGVGGGALALQGLRQRSVM
Ga0137371_1052192513300012356Vadose Zone SoilMSLTIHRGTTSVWNRRGWNGTAERLAVTRWLVGIGGAALVIQGVRQQ
Ga0137361_1182337413300012362Vadose Zone SoilMENNAQSPDLNLTTHRSANSVWERRGWDGTRELALTRWLVGIGGGALAVEG
Ga0137404_1163320113300012929Vadose Zone SoilMTDMNGLNLTTHRAPASVWDRRGWDGTPEQLAMTRWLLGIGGAALALQGLRQRSVMGSL
Ga0126375_1046020123300012948Tropical Forest SoilMTETSRPEGLNLTTHRAPASVWDKRGWDGTREQLALTRLLVGIGGGALAIQGLR
Ga0157379_1056874433300014968Switchgrass RhizosphereLHLIRGMTDTHGLNLTTHRKVESVWERSGWDGTREQLAVTRWLVGIGGGALAVQGIRQ
Ga0157379_1260232923300014968Switchgrass RhizosphereMTSNSDLNLATHRDAASVWERRGWDGTRERLAITRWLVGAGGG
Ga0134072_1015828013300015357Grasslands SoilMTTHTNGLNLTTHRAPASVWDRRGWDGTRRELALTRWLVGLGGAALAL
Ga0132256_10162350523300015372Arabidopsis RhizosphereMNEISQAEGLNLTTHRAPASVWDKRGWDGTPERLALTRWLIGIGGCALAVQGLRQKNV
Ga0132257_10221052623300015373Arabidopsis RhizosphereMNEISQAEVLNLTTHRAPASVWDKRGWDGTPERLALTRWLIGIGGCALAVQGLRQKNV
Ga0132257_10262691713300015373Arabidopsis RhizosphereMTEISHAEGLNLTTHRAPASVWDKRGWDGTREQLALTRWLVGVGGAALAIQGLRQRTVAGSL
Ga0132255_10300930423300015374Arabidopsis RhizosphereMTETSHAEGLNLTTHRAPASVWDKRGWDGPREQLALTRLLVGVGGGALAIQGLRQRTV
Ga0182035_1027437413300016341SoilMTTDTTGLNLTTHRAATSVWDRRGWNGSTEYAVTRWLLGVGGAALAIQGVRHRSRI
Ga0182038_1129866613300016445SoilMTTDTTGLNLTTHRAATSVWDRRGWNGSTEYAVTRWLVGVGGAALAIQGVRHRSRIGTMLAGL
Ga0184638_116921923300018052Groundwater SedimentMNDNNELNLTTHRASASVWDRRGWDGTRERLATTRWLLGIGGTAL
Ga0210399_1061305923300020581SoilMTDTQGLNLTTHRATESVWERGGWDGNREKLAVTRLLVGIGGGALALQGLR
Ga0210384_1130868113300021432SoilMTETLNVAVTTHRANTSVWDRRGWDGRGQPIAITRLLIGIGGGALAIQGVRQRSA
Ga0126371_1379177813300021560Tropical Forest SoilMTGNTTGLNLTTHRAATSVWDRRGWNGSTEYAISRWLVGVGGAALAIQGVRHRSRIGTMLAGL
Ga0222622_1009618643300022756Groundwater SedimentMNDNNELNLTTHRASANVWDRRGWDGTRERLAMTRWLLGIGGTALALQGLR
Ga0207697_1038356013300025315Corn, Switchgrass And Miscanthus RhizosphereMNDNNELNLTTHRASASVWDRRGWDGTRERIAMTRWLVGIGGSALALQGLRQKTVM
Ga0207707_1121001523300025912Corn RhizosphereMNMNELNLTTHRASASVWDRRGWDGSRERLAATRWLLGVGGA
Ga0207660_1126699013300025917Corn RhizosphereMSDMSELNLSTHRASASVWDRRGWDGTRERMAMTRWLLGAGGAAL
Ga0207709_1116065713300025935Miscanthus RhizosphereMTEHELNLTTHRAAESVWKRSGWDGTREQLAMTRWLVGIGGGALA
Ga0207711_1021633943300025941Switchgrass RhizosphereMTSNSDLNLATHRDAASVWERRGWDGTRERLAITRWLVGAGGGVLAIQGLRQRS
Ga0207703_1060694333300026035Switchgrass RhizosphereMTENSADLNLTMATHRAPASVWERQGWDGSKEPLALTRWLVGIGGAALAIQGVRQRSWIG
Ga0207703_1189660713300026035Switchgrass RhizosphereMTQSFSEELNLTTHRASVSVWDRRGWDGSREQRTPARWLVGLGGGALAVQGLR
Ga0207702_1231108913300026078Corn RhizosphereMNQHLSPRTLNLTAHRAPASVWDRQGWDGRPEPLTVSRWLVAAGGSALAIQAF
Ga0207648_1108489723300026089Miscanthus RhizosphereMTEHELNLTTHRAAESVWKRSGWDGTREQLAMTRWLVGIGGGALAVQGLRQRRTSGW
Ga0207675_10109997923300026118Switchgrass RhizosphereMNDNNELNLTTHRAPASVWDRRGWDGTRERLAMTRWLLGIGGCALAL
Ga0207675_10195749113300026118Switchgrass RhizosphereMTDNNELNLTTHRASASVWDRRGWDGTRERLAMTRWLLGIGGCALAL
Ga0207698_1067605613300026142Corn RhizosphereMTEHELNLTTHRAAESVWKRSGWDGTREQLAMTRWLVGIGGGALAVQGLRQRRTS
Ga0209805_117217423300026542SoilMTTHSSGLNLTTHRAPASVWDRRGWDGTRRELALTRWLVGLGGAAL
Ga0209465_1030160923300027874Tropical Forest SoilMAERRELNLRTHRAPVSVWDRRGWDGTPDQPALTRWLLGIGGSALAI
Ga0209465_1041125823300027874Tropical Forest SoilMNEAHGLNLTTHRASVSVWDRRGWNGTPEQLAVTRWLVGIGGAALAVQGLR
Ga0268265_1147589313300028380Switchgrass RhizosphereMTDNNELNLTTHRASASVWDRRGWDGTRERLAMTRWLLGIGGCALALQGVRQK
Ga0318542_1050449313300031668SoilMTTDTTGLNLTTHRAATSVWDRRGWNGSTEYAVTRWLVGVGGAALAIQGVR
Ga0318521_1051663323300031770SoilMTTDTTGLNLTTHRAATSVWDRRGWNGSTEYAVTRWLVGVGGAALAIQ
Ga0307413_1213810213300031824RhizosphereMTDMSELNLQTHRAPVSVWDRRGWNGTREELAVTRLLVGVGGAALAVQGLRQGTWTGR
Ga0318527_1040060713300031859SoilMTTDTTGLNLTTHRAATSVWDRRGWNGSTEYAVTRWLLGVGGAALAIQGVRHRSR
Ga0310916_1011360413300031942SoilMNDANELNLTARRTPVSVWSREGWDGTQQQLTLSRWLVGIGGGALAIQGLRQRSIPGSLL
Ga0310902_1065018113300032012SoilMTDQTADLNLTSTTHRAPASVWERQGWDGSKEPLALTRWLVGIGGAALAVQGVRQRTLIG
Ga0307470_1017874213300032174Hardwood Forest SoilMNDNNELNLTTHRAPASVWDRRGWDGTRERLAMTRWLLGIGGCALALQGVRQK
Ga0310914_1180261933300033289SoilMTEHELNLTTHRSSESVWNRSGWDGTREQLAMTRWLVGIGGSALAVQGLRQRKTSGWML
Ga0318519_1062369223300033290SoilMTTNTSGLNLTTHRAATSVWDRRGWNGSTEYAVTRWLVGVGGAALAIQG
Ga0364929_0253264_1_1683300034149SedimentMTDNHRLNLATHRSPNSVWERSGWDGTREQLATTRWLVGIGGAALAVQGLRQRSIT

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.