Metagenome Family F096454

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096454
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	91 residues
Representative Sequence	MSRTEPPCTSANPPGTSEHRQGKPLTVQEQREALIAPLTARLQALWSKKTLRLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMPPTEAWDL
Number of Associated Samples	63
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	80.77 %
% of genes near scaffold ends (potentially truncated)	27.88 %
% of genes from short scaffolds (< 2000 bps)	70.19 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.654 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog (20.192 % of family members)
Environment Ontology (ENVO)	Unclassified (54.808 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (35.577 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.44% β-sheet: 0.00% Coil/Unstructured: 56.56%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF05973	Gp49	7.84
PF00196	GerE	3.92
PF03449	GreA_GreB_N	2.94
PF13635	DUF4143	1.96
PF02775	TPP_enzyme_C	1.96
PF09084	NMT1	1.96
PF13744	HTH_37	1.96
PF00773	RNB	0.98
PF10615	DUF2470	0.98
PF01641	SelR	0.98
PF13545	HTH_Crp_2	0.98
PF08388	GIIM	0.98
PF02954	HTH_8	0.98
PF00378	ECH_1	0.98
PF00005	ABC_tran	0.98
PF00248	Aldo_ket_red	0.98
PF01695	IstB_IS21	0.98
PF13883	Pyrid_oxidase_2	0.98
PF01381	HTH_3	0.98
PF08240	ADH_N	0.98
PF10502	Peptidase_S26	0.98
PF01663	Phosphodiest	0.98
PF13538	UvrD_C_2	0.98
PF03466	LysR_substrate	0.98
PF02361	CbiQ	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	7.84
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	7.84
COG0782	Transcription elongation factor, GreA/GreB family	Transcription [K]	2.94
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.96
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.96
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	0.98
COG0557	Exoribonuclease R	Transcription [K]	0.98
COG0619	ECF-type transporter transmembrane protein EcfT	Coenzyme transport and metabolism [H]	0.98
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.98
COG4776	Exoribonuclease II	Transcription [K]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
All Organisms	root	All Organisms	41.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
cellular organisms	root	All Organisms → cellular organisms	41.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	7.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.88 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.88 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.96 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.88 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.96 %
Coriobacteriia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.88 %
Eggerthellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia → Eggerthellales	0.96 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.88 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	0.96 %
Eggerthellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia → Eggerthellales → Eggerthellaceae	0.96 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
Bradyrhizobium huanghuaihaiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium huanghuaihaiense	2.88 %
Occallatibacter riparius	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	0.96 %
Clostridium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	0.96 %
Eggerthellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia → Eggerthellales → Eggerthellaceae	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003369\|JGI24140J50213_10155977	Not Available	727	Open in IMG/M
3300009552\|Ga0116138_1032756	Not Available	1549	Open in IMG/M
3300009624\|Ga0116105_1086318	Not Available	768	Open in IMG/M
3300009628\|Ga0116125_1007884	All Organisms → cellular organisms → Bacteria	2868	Open in IMG/M
3300009638\|Ga0116113_1118466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium huanghuaihaiense	648	Open in IMG/M
3300009665\|Ga0116135_1106193	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300009759\|Ga0116101_1125955	Not Available	613	Open in IMG/M
3300010343\|Ga0074044_10995214	Not Available	549	Open in IMG/M
3300012204\|Ga0137374_10822449	Not Available	687	Open in IMG/M
3300012350\|Ga0137372_10136632	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	2016	Open in IMG/M
3300012532\|Ga0137373_10749743	Not Available	724	Open in IMG/M
3300014160\|Ga0181517_10025112	Not Available	4007	Open in IMG/M
3300014160\|Ga0181517_10025112	Not Available	4007	Open in IMG/M
3300014160\|Ga0181517_10232544	Not Available	993	Open in IMG/M
3300014160\|Ga0181517_10355222	Not Available	759	Open in IMG/M
3300014161\|Ga0181529_10076992	All Organisms → cellular organisms → Bacteria	2204	Open in IMG/M
3300014167\|Ga0181528_10000043	All Organisms → cellular organisms → Bacteria	125189	Open in IMG/M
3300014167\|Ga0181528_10638332	Not Available	592	Open in IMG/M
3300014167\|Ga0181528_10830972	Not Available	520	Open in IMG/M
3300014169\|Ga0181531_10618015	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300014201\|Ga0181537_11025482	Not Available	558	Open in IMG/M
3300014491\|Ga0182014_10151129	Not Available	1309	Open in IMG/M
3300014492\|Ga0182013_10166558	Not Available	1367	Open in IMG/M
3300014493\|Ga0182016_10083661	All Organisms → cellular organisms → Bacteria	2315	Open in IMG/M
3300014499\|Ga0182012_10002952	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	18266	Open in IMG/M
3300014499\|Ga0182012_10120963	Not Available	1931	Open in IMG/M
3300014502\|Ga0182021_11333728	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300014502\|Ga0182021_12876965	Not Available	578	Open in IMG/M
3300014654\|Ga0181525_10820143	Not Available	526	Open in IMG/M
3300014655\|Ga0181516_10427813	Not Available	677	Open in IMG/M
3300014657\|Ga0181522_10266289	Not Available	1014	Open in IMG/M
3300014658\|Ga0181519_10025069	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4158	Open in IMG/M
3300014838\|Ga0182030_10062890	All Organisms → cellular organisms → Bacteria	5649	Open in IMG/M
3300014838\|Ga0182030_10096800	Not Available	4113	Open in IMG/M
3300014838\|Ga0182030_10265975	All Organisms → cellular organisms → Bacteria	1938	Open in IMG/M
3300014838\|Ga0182030_10476062	Not Available	1259	Open in IMG/M
3300014838\|Ga0182030_10624577	Not Available	1032	Open in IMG/M
3300014838\|Ga0182030_10706900	Not Available	943	Open in IMG/M
3300014838\|Ga0182030_10797796	Not Available	864	Open in IMG/M
3300014838\|Ga0182030_10945109	Not Available	766	Open in IMG/M
3300014838\|Ga0182030_11175795	Not Available	657	Open in IMG/M
3300014838\|Ga0182030_11320051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium huanghuaihaiense	607	Open in IMG/M
3300017946\|Ga0187879_10096011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia → Eggerthellales → Eggerthellaceae	1701	Open in IMG/M
3300017988\|Ga0181520_10000649	All Organisms → cellular organisms → Bacteria	75063	Open in IMG/M
3300017988\|Ga0181520_10003071	All Organisms → cellular organisms → Bacteria	29870	Open in IMG/M
3300017988\|Ga0181520_10003071	All Organisms → cellular organisms → Bacteria	29870	Open in IMG/M
3300017988\|Ga0181520_10006240	All Organisms → cellular organisms → Bacteria	18401	Open in IMG/M
3300017988\|Ga0181520_10011656	All Organisms → cellular organisms → Bacteria	11486	Open in IMG/M
3300017988\|Ga0181520_10138478	All Organisms → cellular organisms → Bacteria	2001	Open in IMG/M
3300017988\|Ga0181520_10229297	All Organisms → cellular organisms → Bacteria	1436	Open in IMG/M
3300018034\|Ga0187863_10510125	Not Available	674	Open in IMG/M
3300018037\|Ga0187883_10293088	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300018037\|Ga0187883_10344119	Not Available	762	Open in IMG/M
3300018042\|Ga0187871_10017879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	4642	Open in IMG/M
3300018042\|Ga0187871_10163964	Not Available	1252	Open in IMG/M
3300018042\|Ga0187871_10837727	Not Available	513	Open in IMG/M
3300018043\|Ga0187887_10453113	Not Available	757	Open in IMG/M
3300018047\|Ga0187859_10372420	Not Available	781	Open in IMG/M
3300019082\|Ga0187852_1029700	Not Available	2657	Open in IMG/M
3300019787\|Ga0182031_1033305	Not Available	504	Open in IMG/M
3300019787\|Ga0182031_1060815	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300019787\|Ga0182031_1187590	Not Available	1118	Open in IMG/M
3300019787\|Ga0182031_1495534	All Organisms → cellular organisms → Bacteria	2162	Open in IMG/M
3300022863\|Ga0224532_1004944	Not Available	1611	Open in IMG/M
3300022872\|Ga0224526_1058369	Not Available	741	Open in IMG/M
3300023091\|Ga0224559_1014484	All Organisms → cellular organisms → Bacteria	3429	Open in IMG/M
3300023091\|Ga0224559_1047476	All Organisms → cellular organisms → Bacteria	1705	Open in IMG/M
3300023091\|Ga0224559_1143193	Not Available	855	Open in IMG/M
3300024295\|Ga0224556_1122089	Not Available	638	Open in IMG/M
3300028084\|Ga0255356_1071799	Not Available	514	Open in IMG/M
3300028745\|Ga0302267_10416817	Not Available	552	Open in IMG/M
3300028765\|Ga0302198_10287497	Not Available	778	Open in IMG/M
3300028785\|Ga0302201_10415290	Not Available	520	Open in IMG/M
3300028788\|Ga0302189_10172740	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300028813\|Ga0302157_10588702	Not Available	574	Open in IMG/M
3300028874\|Ga0302155_10050024	All Organisms → cellular organisms → Bacteria	1922	Open in IMG/M
3300028882\|Ga0302154_10334410	Not Available	739	Open in IMG/M
3300029908\|Ga0311341_10494856	Not Available	697	Open in IMG/M
3300029916\|Ga0302148_1210414	Not Available	549	Open in IMG/M
3300029953\|Ga0311343_11170610	Not Available	589	Open in IMG/M
3300029956\|Ga0302150_10042313	All Organisms → cellular organisms → Bacteria	1787	Open in IMG/M
3300030051\|Ga0302195_10189136	Not Available	957	Open in IMG/M
3300031261\|Ga0302140_10097553	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2960	Open in IMG/M
3300031261\|Ga0302140_11116184	Not Available	533	Open in IMG/M
3300031759\|Ga0316219_1039380	All Organisms → cellular organisms → Bacteria	2016	Open in IMG/M
3300031759\|Ga0316219_1345223	Not Available	502	Open in IMG/M
3300031813\|Ga0316217_10000327	All Organisms → cellular organisms → Bacteria → Acidobacteria	69415	Open in IMG/M
3300031813\|Ga0316217_10036178	All Organisms → cellular organisms → Bacteria	2897	Open in IMG/M
3300031813\|Ga0316217_10183464	Not Available	873	Open in IMG/M
3300032805\|Ga0335078_10527363	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1510	Open in IMG/M
3300032805\|Ga0335078_10972171	Not Available	1010	Open in IMG/M
3300032954\|Ga0335083_11274081	Not Available	567	Open in IMG/M
3300033402\|Ga0326728_10014987	All Organisms → cellular organisms → Bacteria	16265	Open in IMG/M
3300033402\|Ga0326728_10018728	All Organisms → cellular organisms → Bacteria	13579	Open in IMG/M
3300033402\|Ga0326728_10212892	Not Available	1918	Open in IMG/M
3300033888\|Ga0334792_022788	Not Available	2206	Open in IMG/M
3300034124\|Ga0370483_0000052	All Organisms → cellular organisms → Bacteria	40762	Open in IMG/M
3300034124\|Ga0370483_0151124	Not Available	781	Open in IMG/M
3300034163\|Ga0370515_0001999	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10251	Open in IMG/M
3300034163\|Ga0370515_0045260	Not Available	1952	Open in IMG/M
3300034163\|Ga0370515_0222226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium huanghuaihaiense	803	Open in IMG/M
3300034199\|Ga0370514_142432	Not Available	618	Open in IMG/M
3300034282\|Ga0370492_0006485	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4734	Open in IMG/M
3300034282\|Ga0370492_0085547	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.62%
Aquatic	Environmental → Aquatic	40.38%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	40.38%
Soil	Environmental → Terrestrial → Soil	35.58%
Peat	Environmental → Terrestrial → Peat	24.04%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	35.58%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	31.73%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	24.04%
Lentic	Environmental → Aquatic → Freshwater → Lentic	4.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	3.85%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	29.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	24.04%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	20.19%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.54%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.77%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	4.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.88%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.96%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	20.19%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	18.27%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	13.46%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	9.62%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	7.69%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	7.69%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.77%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	4.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.88%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.88%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.92%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.96%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300022863	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 1-5	Environmental	Open in IMG/M
3300022872	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25	Environmental	Open in IMG/M
3300023091	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 30-34	Environmental	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300028084	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T100	Environmental	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300028765	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2	Environmental	Open in IMG/M
3300028785	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_2	Environmental	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300028874	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029916	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_1	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029956	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_2	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031759	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003P	Environmental	Open in IMG/M
3300031813	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - 1anoA	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033888	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24140J50213_101559772	3300003369	Arctic Peat Soil	MSRTEPPCTSANPPSTSEHQQGKPLTVQEQREALITPLTARLQALWSKKTLTFTSDEIHLLQLMSTLVRLSELDVLQTLPIANKIMPPTEAWDL*
Ga0116138_10327561	3300009552	Peatland	MSRTEPLRTSAHPPGTAEQQQPKPPTVQERREALIAPLTAKLQALWSKGTIAFTSDEIHLLRLMSTLVRLSDLDTLLTLPTANMAMPPEWWD*
Ga0116105_10863181	3300009624	Peatland	MSRTEPRSTSACPPGTDEHQQAELLTVQEQREALITPLTTKLRALWSKGTLRFTSDEIHLLRLMSTLVRLSDLDTLQTLSTAYQAMPPEWWD
Ga0116125_10078842	3300009628	Peatland	MSRTEPLRTSAHPPGTAEQQQPKPPTVQERREALIAPLTSRLQALWSKKAPALTSDEIHLLRLMSTLVRLSDLDTLLTLPTANMAMPPEWWD*
Ga0116113_11184661	3300009638	Peatland	MSRTEPLRTSAHPPGTAEQQQPKPPTVQERREALIAPLTSRLQALWSKKAPALTSDEIHLLRLMRTLVRLSDLDTLLTLPTANMAMPPEWWD*
Ga0116135_11061932	3300009665	Peatland	MSRTELPCTSANPPDTSEHHEPNPLTVQEQREALIAPLTARLQTLWSKKTLTFTSDEIQLLQLMSTLVRLSDLDVLQTLPIANKIMPPTEAWDL*
Ga0116101_11259552	3300009759	Peatland	MSRTEQPCTSAHPPGTAKHQPAELLTVQEKREALIAPLTAKLQALWSKGTIAFTSDEIHLLRLMSTLVRLSDLDTLQTLSTAYEAMPPEWWDL*
Ga0074044_109952141	3300010343	Bog Forest Soil	VHPPGTAEHQQAEIPTVQEKREVLIAPLTAKLQALWSKGTLRFTSDEIHLLRLMSTLVRLSDLDTLQTLSAGYEAMPPE*
Ga0137374_108224492	3300012204	Vadose Zone Soil	MSRVEMSRAHPPVAAEDQQAEPLTIQEKRQALIAPLTSRLQTLWSKGTLAPDEIHLLQLMSTLVRLSDLDVLQTLPVANKIMPPADWNS*
Ga0137372_101366322	3300012350	Vadose Zone Soil	MSRVETSRAHPPVAAEDQQAEPLTIQEKRQALIAPLTSRLQTLWSKGTLAPDEIHLLQLMSTLVRLSDLDVLQTLPVANKIMPPADWNT*
Ga0137373_107497432	3300012532	Vadose Zone Soil	MSRVEMSRAHPPVAAEDQQAEPLTIQEKRQALIAPLTSRLQTLWSKGTLAPDEIQLLQLMSTLVRLSDLDVLQTLPVANKIMPPADWNT*
Ga0181517_100251121	3300014160	Bog	MSRTEPPCTSANPPGTSEHRQGKPLTVQEQREALIAPLTARLQALWSKKTLRLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMPPTEAWDL*
Ga0181517_100251124	3300014160	Bog	MSRTEPLRPVARHPGSAKQKTELLTIQEKREELITPLVARLQALWSKETLHLTSDEIHLLQLMSTLVRLSDLDVLQTLPIANEIRPPTEAWDL*
Ga0181517_102325441	3300014160	Bog	MSRTELPCTSANPPDTSEHHQGKRLTVQEQREALITPLTARLQALWSKKTLRLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMPPTEAWEL*
Ga0181517_103552222	3300014160	Bog	GNTVMSRTEPPRKSAQPPGSAEQQKAELLTVQEKREALIAPLTAQLQALWSKETLRLTSDEIHLLQLMSTLVRLSDIDVLQTLPIANEIMPPTEAWDL*
Ga0181529_100769922	3300014161	Bog	MSRTELPCTSANPPDTSEHHQGKPLTVQEQREALIAPLTARLQALWSKKTLRLTSDEVNLLQLMGTLVRLSDLDVLQTLPIANKIMPPTEAWDL*
Ga0181528_1000004368	3300014167	Bog	MSRTEPPCTSANPPNTAEHQQGKPLTVQEQREALIAPLTARLQALWSKKTLRLTSDEVNLLQLMGTLVRLSDLDVLQTLPIANKIMPPTEAWDL*
Ga0181528_106383321	3300014167	Bog	MSRIEPPQTSEHPLGVAVHKAEVLTAQEEREALIAPLTAGLQALWSRENLPFTSDEIHLLQLMSTLVRLSDLDVLQTLPIANKIMPPTEPWNS*
Ga0181528_108309721	3300014167	Bog	VHPPGAAEHQQQAELLTVQEKREALIAPLTAKLQALGSKGTIAFTSDEIYLLRLMSTLVRLSDLETLQTLSTAYKAMPPEWWDL*
Ga0181531_106180152	3300014169	Bog	MSRTELPCTSANPPDTSEHHQGKPLTVQEQREALIAPLTARLQALWSKKTLGLTSDEVDLLQLMSTLVRLSDLDVLQTLPIAN
Ga0181537_110254821	3300014201	Bog	MSRTELPCTSANPPGTSEHHQGKPLTVQEQREALIAPLTARLQALWSKKTLRLTSDEVNLLQLMSTLVRLSDLDVLQTLPIANKIMPPTEAWDL*
Ga0182014_101511292	3300014491	Bog	MSRTELPCTSANPSGTSEHRQGKPLTIQKQREALIAPLTARLQALWSKKTLRLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMPPTEAWDL*
Ga0182013_101665581	3300014492	Bog	MSRTEPPRKSAQTPGSAEQQKAELLTVQEKREALIAPLTAQLQALWSKETLRLTSDEIHLLQLMSTLVRLSDIDVLQTLPIANEIMPPTEAWDL*
Ga0182016_100836612	3300014493	Bog	MSRTEPPCTSVHPPGTAKHQQAELLTVQEKREALIAPLTAKLQALWSKGTLRFTSEEIHLLRLMSTLVRLSDLETLQTLSTAYEAMPPEWWDL*
Ga0182012_1000295218	3300014499	Bog	MSRTELPCTSANPPGTSEHRQGKPLTIQKQREALIAPLTARLQALWSKKTLRLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMPPTEAWDL*
Ga0182012_101209632	3300014499	Bog	VHPPGTAEHQQQADLLTVQEKREALIAPLTAKLQALWSKGTIAFTSDEIHLLRLMSTLVRLSDLETLQTLSTAYEAMPPEWWDL*
Ga0182021_113337281	3300014502	Fen	MSRTELPCTSANPPGTSEHRQGKPLTVQEQREALIAPLTARLQALWSKKTLRLTSEEVDLLQLMSTLVRLSDLDVLQTLPIANKIMPPTEAW
Ga0182021_128769651	3300014502	Fen	MSRTERPSKSEHPPSTAEDQQAEPRTIQEQREALITPLIAGLQALWSKKTLALMPDEIHLLQLMSTLVRLSDL
Ga0181525_108201431	3300014654	Bog	MSRTEPPCRSANPPGTSEHRQGKPLTLQEQREALIAPLTTRLQDLWSKKTLRLTSDEVDLLQLMSTLIRLSDLDVLQTLPIANKIMPPTEAWDL*
Ga0181516_104278132	3300014655	Bog	MSRTELPCTSANPPDTSEHHQGKPLTVQEQREALIAPLTARLQALWSKKTLLLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMQPTEAWDL*
Ga0181522_102662891	3300014657	Bog	MSRTEPPCRSANPPGTSEHRQGKPLTLQEQREALIAPLTARLQDLWSKKTLRLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMPPTEAWDL*
Ga0181519_100250692	3300014658	Bog	MSRTEPPRKSAQPPGSAEQQKAELLTVQEKREALIAPLTAQLQALWSKETLRLTSDEIHLLQLMSTLVRLSDIDVLQTLPIANEIMPPTEAWDL*
Ga0182030_100628905	3300014838	Bog	MSKKKSPRTSAHPPVTAEDQPAEPFTFHEQREALILPLTTGLRALWSKKTLALTSDEIHLLRLMCTLVRLSDLDSLQALPAANKAMPPEWWNS*
Ga0182030_100968006	3300014838	Bog	MSRTAPLRTSANPPGTAEQQQPNPLTVQERREALIAPLTSRLQVLWSKKTPALTSDEIHLLRLMSTLVRLSDLDTLLTLPTANMAMPPEWWD*
Ga0182030_102659752	3300014838	Bog	MSRTKPPCTSAIPPGTFEHQQGKPLTIQEQREALIAPLTTRLQALWSKETLTFTPDEIHLLQLMSTLVRLSDIDVLQTLPIANQIRPPTEAWDL*
Ga0182030_104760622	3300014838	Bog	SEHHQGKPLTVQEQREALIAPLTARLQALWSKKTLGLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMPPTEAWDL*
Ga0182030_106245772	3300014838	Bog	MSRTELPCTSANPPGTSEHHQGKPLTVQEQREALIAPLTAGLRALWSRKTLRLTSDEIDLLQLMSTLVRLSDLDVLQTLTIANKIMPPNEAWDL*
Ga0182030_107069002	3300014838	Bog	MSRTEPPCTSAHPPGTAKHQQAELLTVQEKREALIAPLTAKLQALWSKGTLRFTSDEIHLLRLMSTLVRLSDLETLQTLSTAYEAMPPEWWDL*
Ga0182030_107977961	3300014838	Bog	MSRTEPFRTSANPPGTAEEQQPKPLTVQERREALIAPLTSRLQALWSKKTPALTSDEIHLLRLMSTLVRLSDLDTLLTL
Ga0182030_109451091	3300014838	Bog	HVNPSSVTGRFAKRGDFVMSRTEPLRTSAHPPGTAEQQQPKSPTVQERREALIAPLTSRLQALWSKKTPALTSDEIHLLRLMSTLVRLSDLDTLLTLPTANMAMPPEWWD*
Ga0182030_111757951	3300014838	Bog	SEHHQGKPLTVQEQREALIAPLTARLQALWSKKTLRLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMPPTEAWDL*
Ga0182030_113200511	3300014838	Bog	HVNPSSVTGRFAKRGDFVMSRTEPLRTSAHPPGTAEQQQPKPPTVQERREALIAPLTSRLQALWSKKAPVLTSDEIHLLRLMSTLVRLSDLDTLLTLPTANMAMPPEWWD*
Ga0187879_100960112	3300017946	Peatland	MSRTEPLRTSAHPPGTAEQQQPKPPTVQERREALIAPLTSRLQALWSKKAPALTSDEIHLLRLMSTLVRLSDLDTLLTLPTANMAMPPEWWD
Ga0181520_100006493	3300017988	Bog	MSRTELPCTSANPPDTSEHHQGKRLTVQEQREALITPLTARLQALWSKKTLRLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMPPTEAWEL
Ga0181520_1000307112	3300017988	Bog	MSRTEPLRPVARHPGSAKQKTELLTIQEKREELITPLVARLQALWSKETLHLTSDEIHLLQLMSTLVRLSDLDVLQTLPIANEIRPPTEAWDL
Ga0181520_1000307115	3300017988	Bog	MSRTELPCTSANPPDTSEHHQGKPLTVQEQREALIAPLTARLQALWSKKTLRLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMQPTEAWDL
Ga0181520_100062408	3300017988	Bog	MSRIEPPCTSANPPNTSEHQQGKSLTVQEQREALIAPLTARLQALWSKETLTFTSDEIHLLQLMSTLVRLSELDVLQTLPIANRIMPPTEAWDL
Ga0181520_1001165617	3300017988	Bog	MSRTEPPCTSANPPNTSEHYEGKPITVQEQREALIAPLTARLQALWSKKTLRLSSDEVDLLQLMSTLVRLSDIAVLQTLPIANKIMPTTEAWDL
Ga0181520_101384783	3300017988	Bog	MSRTEPPCTSANPPNTAEHQQGKPLTVQEQREALIAPLTARLQALWSKKTLRLTSDEVNLLQLMGTLVRLSDLDVLQTLPIANKIMPPTEAWDL
Ga0181520_102292971	3300017988	Bog	MSRTEPPCTSANPPGTSEHRQGKPLTVQEQREALIAPLTARLQALWSKKTLRLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMPPTEAWD
Ga0187863_105101251	3300018034	Peatland	MSRTEPPCTSAHLPDTAKHQQAELLTVQEKREALIAPLTAKLQALWSKGTFAFTSDEIHLLRLMSTLVRLSDLDTLQTLSTAYKAMPPEWWDL
Ga0187883_102930882	3300018037	Peatland	MSRTELPCTSANPPGTSEHRQGKPLTVQEQREALIAPLTARLQALWSKKTLRLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMPPTEAWDL
Ga0187883_103441191	3300018037	Peatland	MSRTEPLRTCANPPGTAEQQQPKPLTLQERREALIAPLTSRLQALWSKKTPALTSDEIHLLRLMSTLVRLSDLDTLLTLPTANMAMPPEWWD
Ga0187871_100178796	3300018042	Peatland	MSRTEPLRTSAHPPGTAEQQQPKPPTVQERREALIAPLTSRLQALWSKKAPALTSDEIHLLRLMSTLVRLSDLDTLQTLPTANMAMPPEWWD
Ga0187871_101639641	3300018042	Peatland	TEPRSTSACPPGTDEHQQAELLTVQEQREALITALTTKLRALWSKGTLRFTSDEIHLLRLMSTLVRLADLDTLQTLATANKAMPPEWWD
Ga0187871_108377271	3300018042	Peatland	MSRTEPRSTSACPPGTDEHQQAELLTVQEQREALITPLTTKLRALWSKGTLRFTSDEIHLLRLMSTLVRLSDLDTLQTLSTAYEAMPPEWWDL
Ga0187887_104531131	3300018043	Peatland	MSRTEPPCTSAHPPGTAKHQQAEPLTVQEKREALIAPLTAKLQALWSKGTLRFTSDEIHLLRLMSTLVRLSDLDTLQTLSTAYKAMPPEWWDL
Ga0187859_103724201	3300018047	Peatland	MSRTKLPCTSVHPPGTAEHQQQADLLTVQEKREALIAPLTAKLQALWSKGTIAFTSDEIHLLRLMSTLVRLSDLDTLQTLSTAYKAMPPEWWDV
Ga0187852_10297003	3300019082	Peatland	MSRTEPLRTSAHPPGTAEQQQPKPPTVQERREALIAPLTSRLQALWSKKTPALTSDEIHLLRLMSTLVRLSDLDTLLTLPTANMAMPPEWWD
Ga0182031_10333051	3300019787	Bog	MSRTEPLRTSAHPPGTAEQQQPKSPTVQERREALIAPLTSRLQALWSKKTPALTSDEIHLLRLMSTLVRLSDLDTLLTLPTANMAMPPEWW
Ga0182031_10608151	3300019787	Bog	MSRTELPCTSANPPGTSEHRQGKPLTIQKQREALIAPLTARLQALWSKKTLRLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMPPTEAWEL
Ga0182031_11875901	3300019787	Bog	MSRTEPLRTSAHPPGTAEQQQPKPPTVQERREALIAPLTSRLQALWSKKAPALTSDEIHLLRLMSTLVRLSDLDTLLTLPTANMTMPPEWWD
Ga0182031_14955344	3300019787	Bog	MSRTELPCTSANPSGTSEHRQGKPLTIQKQREALIAPLTARLQALWSKKTLRLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMPPTEAWDL
Ga0224532_10049441	3300022863	Soil	MSRTERPRKSGHPPSTAEYQQAEPSTIQEQREALVAPLIAGLQALWSKRTLALTPEEVHLLQLMSTLVRLSDLDTLQTLPIANKTMPPKWWNS
Ga0224526_10583691	3300022872	Soil	MSRTEPPRKSAQTPGSAEQQKAELLTVQEKREALIAPLTAQLQALWSKETLRLTSDEIHLLQLMSTLVRLSDIDVLQ
Ga0224559_10144842	3300023091	Soil	MSKKKSPRTSAHPPVTAEDQPAEPFTFHEQREALILPLTTGLRALWSKKTLALTSDEIHLLRLMCTLVRLSDLDSLQALPAANKAMPPEWWNS
Ga0224559_10474762	3300023091	Soil	MSRTEPPCRSANPPGTSEHRQGKPLTLQEQREALIAPLTARLQDLWSKKTLRLTSDEVDLLQLMSTLIRLSDLDVLQTLPIANKIMPPTEAWDL
Ga0224559_11431932	3300023091	Soil	MSRTKPPCTSAIPPGTFEHQQGKPLTIQEQREALIAPLTTRLQALWSKETLAFTSDEIHLLQLMSTLVRLSDIDVLQTLPIANQIRPPTEAWDL
Ga0224556_11220891	3300024295	Soil	MSRTELPCTSANPPGTSEHRQGKPLTLQEQREALIAPLTARLQALWSKKTLRLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMPPPWRGIYSPCNI
Ga0255356_10717991	3300028084	Soil	MSRTEPPRKSAQTPGSAEQQKAELLTVQEKREALIAPLTAQLQALWSKETLRLTSDEIHLLQLMSTLVRLSDIDVLQTLPIANEIMPPT
Ga0302267_104168172	3300028745	Bog	SANPSGTSEHRQGKPLTIQKQREALIAPLTARLQALWSKKTLRLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMPPTEAWDL
Ga0302198_102874972	3300028765	Bog	ANPSGTSEHRQGKPLTIQKQREALIAPLTARLQALWSKKTLRLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMPPTEAWDL
Ga0302201_104152901	3300028785	Bog	MSRTELPCTSANPSGTSEHRQGKPLTIQKQREALIAPLTARLQALWSKKTLRLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMPPTE
Ga0302189_101727401	3300028788	Bog	MSRTELPCTSANPPDTSEHHQGKPLTVQEQREALIAPLTARLQALWSKKTLRLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMPPTEAWDL
Ga0302157_105887021	3300028813	Bog	MSRTELPCTSANPPGTSEHRQVKPLTIQKQREALIAPLTARLQALWSKKTLRLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMPPPWRGIYSPCNI
Ga0302155_100500244	3300028874	Bog	MSRTELPCTSANPPGTSEHRQVKPLTIQKQREALIAPLTARLQALWSKKTLRLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMPPTEAWDL
Ga0302154_103344101	3300028882	Bog	EHRQGKPLTIQKQREALIAPLTARLQALWSKKTLRLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMPPTEAWDL
Ga0311341_104948561	3300029908	Bog	CTSANPPGTSEHRQGKPLTIQKQREALIAPLTARLQALWSKKTLRLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMPPTEAWDL
Ga0302148_12104141	3300029916	Bog	MSRTELPCTSANPPDTSEHHQGKPLTVQEQREALIAPLTARLQALWSKKTLRLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMPPT
Ga0311343_111706102	3300029953	Bog	MSRTEPPCTSAIPPDTSEHHQGIPLTVQEQRDALIAPLTARLQALWSKKTLRLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMPPTEAWDL
Ga0302150_100423134	3300029956	Bog	MSRTELPCTSANPSGTSEHRQGKPLTIQKQREALIAPLTARLQALWSKKTLRLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMPPTEAWEL
Ga0302195_101891362	3300030051	Bog	MSRTELPCTSANPSGTSEHRQGKPLTIQKQREALIAPLTARLQALWSKKTLRLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMPPPWRGIYSPCNI
Ga0302140_100975531	3300031261	Bog	MSRTELPCTSANPSGTSEHRQGKPLTIQKQREALIAPLTARLQALWSKKTLRLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMP
Ga0302140_111161841	3300031261	Bog	EPPCTSANPPDTSEHHQGIPLTVQEQRDALIAPLTARLQALWSKKTLRLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMPPTEAWDL
Ga0316219_10393802	3300031759	Freshwater	MSRTKPPCTSYDPQCISEHIQGKKLTVQEQRDALIAPLTAKLQALWSKETLTFTSDEIHLLQLMSTLVRLSDLDVLQTLAIANKVMPPTAWDL
Ga0316219_13452231	3300031759	Freshwater	MSRTEPPCTSANPPNTSEHQQGKPLTVQEQREALIAPLTARLQALWSKKTLRLTSDEVDLLQLMSTLVRLSDLDVLQTLPIANKIMPPTEAWDL
Ga0316217_100003274	3300031813	Freshwater	MSRTEPPCTSAHPPGTAKLQQAELLTVQEKREALIAPLTAKLQALWSKGTIAFTSDEIHLLRLMSTLVRLSDLDTLQTLSTAYRAMPPEWWDL
Ga0316217_100361782	3300031813	Freshwater	MSRTEPPCTSVHSPGTGEHQPAELLTVQEKREALIAPLTAKLQALWSKGTLRFTSDEIHLLRLMSTLVRLSDLDTLQTLSTAYKAMPPEWWDL
Ga0316217_101834641	3300031813	Freshwater	MSRTEPPCTAAHPPGAAKHHQAELLTIQEKREALIAPLTAKLQALWSKGTLRFTSDEIHLLRLMSTLVRLSDLDTLQTLSTAYKAMPPEWWDL
Ga0335078_105273631	3300032805	Soil	MSRTEPPCTSANPPNTSEHQQSKPLTVQEQREALIAPLTARLQALWSKKTLRLTSDEVNLLQLMSTLVRLSDLDVLQTLPIANKIMPPTEAWDL
Ga0335078_109721712	3300032805	Soil	GDFAMSRTEPLRTSANPPGTAEQQQPKPLTVQERREALIAPLTSRLRALWSKKTSTLTPDEIQLLRLMSTLVRLSDLDTLLTLPTANMAMPPEWWDL
Ga0335083_112740812	3300032954	Soil	NPPNTSEHQQSKPLTVQEQREALIAPLTARLQALWSKKTLRLTSDEVNLLQLMSTLVRLSDLDVLQTLPIANKIMPPTEAWDL
Ga0326728_1001498710	3300033402	Peat Soil	MSRTERSRKSEHPPSTAEYQQAEPSTIQEQREALVAPLIAGLQALWSKKTLALTPDEIHLLQLMSTLVRLSDLDTLQTLPIANKTMPPKWWNL
Ga0326728_1001872812	3300033402	Peat Soil	MSRTELPCTSANPPDTSEHHEPNPLTVQEQREALIAPLTARLQTLWSKKTLTFTSDEIQLLQLMSTLVRLSELDVLQTLPIANKIMPPTEAWDL
Ga0326728_102128922	3300033402	Peat Soil	MSRTEPRRPVAQQGSAEQKTELLTIQEKREELITPLVTRLQALWSKETLHLTSDEIHLLQLMSTLVRLSDLDVLQTLPIANEIMPPTQAWDV
Ga0334792_022788_1651_1929	3300033888	Soil	MSRTEPLRTSAHPPGTAELQRPKPPTVQERREALIAPLTSRLQALWSKKTPALTSDEIHLLRLMSTLVRLSDLDTLLTLPTANVAMPPEWWD
Ga0370483_0000052_23417_23698	3300034124	Untreated Peat Soil	MSRTEPPRTANLSCADHKRAKVHSVQEQRDALITPLTTRLHALWSKRTLRLSSDEIDLLQLMSTLVRLSDLDVLQTLPIANKVMPPTEKGWDL
Ga0370483_0151124_429_680	3300034124	Untreated Peat Soil	VHPPGTAEHQQQTELLTVQEKREALIAPLTAKLQALWSKGTLRFTSDEIHLLRLMSTLVRLSDLDTLQTLSTAYKAMPPEWWD
Ga0370515_0001999_5341_5622	3300034163	Untreated Peat Soil	MSKTEPPCTSVHPPGTAEHQPAELLTVQEKREALVAPLTAKLQALWSKGTLRFTSDEIHLLRLMSTLVRLSDLETLQTLSTAYEAMPPEWWDL
Ga0370515_0045260_1676_1930	3300034163	Untreated Peat Soil	VHPPGTAEHQQQADLLTVQEKREALIAPLTAKLQALWSKGTIAFTSDEIHLLRLMSTLVRLSDLDTLQTLSTAYKAMPPEWWDL
Ga0370515_0222226_2_253	3300034163	Untreated Peat Soil	SAHPPGTAEQQQPKPPTVQERREALIAPLTSRLQALWSKKAPVLTSDEIHLLRLMSTLVRLSDLDTLLTLPTANMAMPPEWWD
Ga0370514_142432_358_618	3300034199	Untreated Peat Soil	MSRTEPLRTSANPPGTAEQQQPKPLTVQERREALIAPLTSRLQALWSKKTPALTSDEIHLLRLMSTLVRLSDLDTLLTLPTANMAML
Ga0370492_0006485_4501_4734	3300034282	Untreated Peat Soil	EHQQGKPLTVQEQREALIAPLTARLQALWSKKTLRLTSDEVDLLQLMSTLIRLSDLDVRQTLPIANKIMPPTKEWDL
Ga0370492_0085547_1_276	3300034282	Untreated Peat Soil	MSRTELPCTSANPPDTSEHHQGKPLTVQEQREALIAPLTARLQALWSKKTLRLTSDEVDLLQLMSTLIRLSDLDVLQTLPIANKIMPPTEEW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096454

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences