NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F096433

Metagenome / Metatranscriptome Family F096433

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F096433
Family Type Metagenome / Metatranscriptome
Number of Sequences 104
Average Sequence Length 57 residues
Representative Sequence VHFELNGKSYMLNFNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPNIVTPAESAMIN
Number of Associated Samples 62
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 64.42 %
% of genes near scaffold ends (potentially truncated) 28.85 %
% of genes from short scaffolds (< 2000 bps) 74.04 %
Associated GOLD sequencing projects 56
AlphaFold2 3D model prediction Yes
3D model pTM-score0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (62.500 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(22.115 % of family members)
Environment Ontology (ENVO) Unclassified
(42.308 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(61.538 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 6.98%    β-sheet: 29.07%    Coil/Unstructured: 63.95%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.48
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF00226DnaJ 36.54
PF00012HSP70 25.96
PF01556DnaJ_C 9.62
PF01425Amidase 3.85
PF02566OsmC 2.88
PF02744GalP_UDP_tr_C 2.88
PF10518TAT_signal 1.92
PF12697Abhydrolase_6 0.96
PF13302Acetyltransf_3 0.96
PF01797Y1_Tnp 0.96
PF00141peroxidase 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG0443Molecular chaperone DnaK (HSP70)Posttranslational modification, protein turnover, chaperones [O] 25.96
COG0484DnaJ-class molecular chaperone with C-terminal Zn finger domainPosttranslational modification, protein turnover, chaperones [O] 9.62
COG0154Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidaseTranslation, ribosomal structure and biogenesis [J] 3.85
COG1764Organic hydroperoxide reductase OsmC/OhrADefense mechanisms [V] 2.88
COG1765Uncharacterized OsmC-related proteinGeneral function prediction only [R] 2.88
COG0376Catalase (peroxidase I)Inorganic ion transport and metabolism [P] 0.96
COG1943REP element-mobilizing transposase RayTMobilome: prophages, transposons [X] 0.96


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms65.38 %
UnclassifiedrootN/A34.62 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_104862495Not Available703Open in IMG/M
3300000955|JGI1027J12803_103782359Not Available510Open in IMG/M
3300003152|Ga0052254_1064291All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300003219|JGI26341J46601_10018180All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter2305Open in IMG/M
3300003219|JGI26341J46601_10018607Not Available2277Open in IMG/M
3300004091|Ga0062387_100049179All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter2009Open in IMG/M
3300004092|Ga0062389_104997822All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium 4572_32.1500Open in IMG/M
3300004152|Ga0062386_100466461Not Available1023Open in IMG/M
3300004152|Ga0062386_100731651All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium813Open in IMG/M
3300004633|Ga0066395_10001158All Organisms → cellular organisms → Bacteria9524Open in IMG/M
3300005363|Ga0008090_15227056All Organisms → cellular organisms → Bacteria → Acidobacteria763Open in IMG/M
3300005764|Ga0066903_107787745Not Available551Open in IMG/M
3300005764|Ga0066903_109018833Not Available505Open in IMG/M
3300006052|Ga0075029_101334476Not Available504Open in IMG/M
3300009698|Ga0116216_10624844All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae648Open in IMG/M
3300009826|Ga0123355_10210984All Organisms → cellular organisms → Bacteria2814Open in IMG/M
3300010048|Ga0126373_10057397All Organisms → cellular organisms → Bacteria3480Open in IMG/M
3300010048|Ga0126373_11011894Not Available896Open in IMG/M
3300010048|Ga0126373_12190942All Organisms → cellular organisms → Bacteria → Acidobacteria614Open in IMG/M
3300010361|Ga0126378_10567314All Organisms → cellular organisms → Bacteria1249Open in IMG/M
3300010361|Ga0126378_10788992All Organisms → cellular organisms → Bacteria1060Open in IMG/M
3300010361|Ga0126378_11062520All Organisms → cellular organisms → Bacteria912Open in IMG/M
3300010361|Ga0126378_11389196Not Available795Open in IMG/M
3300010366|Ga0126379_11087524All Organisms → cellular organisms → Bacteria → Acidobacteria905Open in IMG/M
3300010376|Ga0126381_100219061All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2557Open in IMG/M
3300010376|Ga0126381_100555789All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1627Open in IMG/M
3300010376|Ga0126381_101136540Not Available1128Open in IMG/M
3300010376|Ga0126381_101680393All Organisms → cellular organisms → Bacteria917Open in IMG/M
3300010376|Ga0126381_103804479Not Available590Open in IMG/M
3300010379|Ga0136449_100056503All Organisms → cellular organisms → Bacteria8696Open in IMG/M
3300010398|Ga0126383_11670414Not Available726Open in IMG/M
3300012971|Ga0126369_10521366All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1249Open in IMG/M
3300012971|Ga0126369_11767071All Organisms → cellular organisms → Bacteria → Acidobacteria707Open in IMG/M
3300012971|Ga0126369_11882802Not Available687Open in IMG/M
3300014200|Ga0181526_10088159All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1980Open in IMG/M
3300016270|Ga0182036_10800066All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300016294|Ga0182041_11225364All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300016319|Ga0182033_10001687All Organisms → cellular organisms → Bacteria11076Open in IMG/M
3300016357|Ga0182032_10176157Not Available1607Open in IMG/M
3300016357|Ga0182032_10273032All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1324Open in IMG/M
3300016371|Ga0182034_10136927All Organisms → cellular organisms → Eukaryota1819Open in IMG/M
3300016371|Ga0182034_10701848Not Available860Open in IMG/M
3300016371|Ga0182034_11303609All Organisms → cellular organisms → Bacteria → Acidobacteria633Open in IMG/M
3300016404|Ga0182037_10916290Not Available761Open in IMG/M
3300016404|Ga0182037_11796354Not Available548Open in IMG/M
3300016404|Ga0182037_12058482All Organisms → cellular organisms → Bacteria → Acidobacteria513Open in IMG/M
3300016445|Ga0182038_10527348All Organisms → cellular organisms → Bacteria1011Open in IMG/M
3300021407|Ga0210383_10007825All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae9254Open in IMG/M
3300021560|Ga0126371_10017527All Organisms → cellular organisms → Bacteria6575Open in IMG/M
3300021560|Ga0126371_10169398All Organisms → cellular organisms → Bacteria2259Open in IMG/M
3300021560|Ga0126371_11704526All Organisms → cellular organisms → Bacteria754Open in IMG/M
3300021560|Ga0126371_11743684All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum745Open in IMG/M
3300027783|Ga0209448_10003351All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4956Open in IMG/M
3300027812|Ga0209656_10002463All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae11974Open in IMG/M
3300027812|Ga0209656_10017492All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4424Open in IMG/M
3300027824|Ga0209040_10399053All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300031544|Ga0318534_10484944All Organisms → cellular organisms → Bacteria → Acidobacteria707Open in IMG/M
3300031544|Ga0318534_10607837Not Available621Open in IMG/M
3300031545|Ga0318541_10102663All Organisms → cellular organisms → Bacteria1537Open in IMG/M
3300031545|Ga0318541_10284641Not Available921Open in IMG/M
3300031545|Ga0318541_10367835Not Available803Open in IMG/M
3300031564|Ga0318573_10085904All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1596Open in IMG/M
3300031573|Ga0310915_10069241All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2321Open in IMG/M
3300031744|Ga0306918_11264661All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300031771|Ga0318546_10383785All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae980Open in IMG/M
3300031795|Ga0318557_10305843Not Available730Open in IMG/M
3300031833|Ga0310917_10980373All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300031890|Ga0306925_10200454Not Available2152Open in IMG/M
3300031896|Ga0318551_10479958All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae712Open in IMG/M
3300031910|Ga0306923_10030004All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis5855Open in IMG/M
3300031910|Ga0306923_10091305All Organisms → cellular organisms → Bacteria3427Open in IMG/M
3300031910|Ga0306923_12070545Not Available575Open in IMG/M
3300031912|Ga0306921_10299404Not Available1883Open in IMG/M
3300031912|Ga0306921_12611210All Organisms → cellular organisms → Bacteria → Acidobacteria521Open in IMG/M
3300031941|Ga0310912_10249707All Organisms → cellular organisms → Eukaryota1365Open in IMG/M
3300031941|Ga0310912_10427388All Organisms → cellular organisms → Bacteria1032Open in IMG/M
3300031941|Ga0310912_10903945All Organisms → cellular organisms → Bacteria → Acidobacteria679Open in IMG/M
3300031942|Ga0310916_10246625Not Available1504Open in IMG/M
3300031942|Ga0310916_10774170All Organisms → cellular organisms → Bacteria → Acidobacteria809Open in IMG/M
3300031945|Ga0310913_10139808Not Available1667Open in IMG/M
3300031945|Ga0310913_11041821All Organisms → cellular organisms → Bacteria → Acidobacteria572Open in IMG/M
3300032009|Ga0318563_10808784Not Available502Open in IMG/M
3300032042|Ga0318545_10377058All Organisms → cellular organisms → Bacteria → Acidobacteria511Open in IMG/M
3300032064|Ga0318510_10142823Not Available941Open in IMG/M
3300032076|Ga0306924_11363512Not Available758Open in IMG/M
3300032160|Ga0311301_11779645Not Available735Open in IMG/M
3300032261|Ga0306920_101581516All Organisms → cellular organisms → Bacteria933Open in IMG/M
3300032261|Ga0306920_102681868Not Available681Open in IMG/M
3300032261|Ga0306920_102730644Not Available674Open in IMG/M
3300032770|Ga0335085_10098269Not Available3792Open in IMG/M
3300032770|Ga0335085_10459318All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1463Open in IMG/M
3300032782|Ga0335082_10817354All Organisms → cellular organisms → Bacteria → Acidobacteria794Open in IMG/M
3300032783|Ga0335079_10160468All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2517Open in IMG/M
3300032828|Ga0335080_10094406Not Available3318Open in IMG/M
3300032829|Ga0335070_10020050All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis7730Open in IMG/M
3300032829|Ga0335070_10143534All Organisms → cellular organisms → Bacteria2437Open in IMG/M
3300032829|Ga0335070_10217183Not Available1893Open in IMG/M
3300032829|Ga0335070_10645909All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae992Open in IMG/M
3300032893|Ga0335069_10043917All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis5933Open in IMG/M
3300032893|Ga0335069_10349290All Organisms → cellular organisms → Eukaryota1747Open in IMG/M
3300032893|Ga0335069_10860252All Organisms → cellular organisms → Bacteria → Acidobacteria1016Open in IMG/M
3300032893|Ga0335069_11546864All Organisms → cellular organisms → Bacteria → Acidobacteria712Open in IMG/M
3300032897|Ga0335071_10102419Not Available2808Open in IMG/M
3300032954|Ga0335083_10090465All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter3050Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil22.12%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil21.15%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil20.19%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil14.42%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil9.62%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.88%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.92%
SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Sediment0.96%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.96%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.96%
Termite GutHost-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut0.96%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil0.96%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300003152Freshwater sediment microbial communities from Loktak Lake, IndiaEnvironmentalOpen in IMG/M
3300003219Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005363Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300009826Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1Host-AssociatedOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300014200Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaGEnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300027783Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027812Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027824Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031564Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031795Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300032009Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19EnvironmentalOpen in IMG/M
3300032042Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26EnvironmentalOpen in IMG/M
3300032064Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300032897Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10486249523300000364SoilVRIEVHFELNGKSYVLNWNPQDERWYLLTAGPRGLAKAIPVFEDEEGFVPNIVAPAESAMIN*
JGI1027J12803_10378235913300000955SoilVHFELNGKSYVLNWNPQDERWYLLTAGPRGLAKAIPVFEDEEGFVPNIVAPAESAMIN*
Ga0052254_106429113300003152SedimentVHFELNGKSYMLNWNPEDERWYLLTAGPRGMAKAIPVFEDEEGFVPNIVAPAESAMIN*
JGI26341J46601_1001818023300003219Bog Forest SoilVHFELNGQSYVLNFNPQDERWYLLTAGLGGRAKAIPVFNDEEGFVPNIVVPAESEGSGRVN*
JGI26341J46601_1001860713300003219Bog Forest SoilVHFELNGQSYVLNFNPQDERWYLLTAGLGGRAKAIPVFNDEEGFVPNFVVPAESEGTGRVN*
Ga0062387_10004917923300004091Bog Forest SoilVHFELNGQSYVLNFNPQDERWYLLTAGLGGRAKAIPVFNDEEGFVPNIVVPAEGEGSGRIN*
Ga0062389_10499782223300004092Bog Forest SoilEVHFELNGKSYMLNFNPQDERWYLLTAGLSGMAKAIPVFEDEEGFVPNIVVPTASEGTGSVN*
Ga0062386_10046646123300004152Bog Forest SoilVHFEYNGQAYALNFNPQDERWYLLTAGLGGRAKVIPVFNDEEGFVPNIVVPAESEGTGSVN*
Ga0062386_10073165123300004152Bog Forest SoilVHFELNGQSYVLNFNPQDERWYLLTAGFGGRAKAIPVFNDEEGFVPNFVVPAEGEGTRSVN*
Ga0066395_10001158113300004633Tropical Forest SoilMRSEVHFELNGKSYVLNWNPQDERWYLVTAGLGGMAKAIPVLEDEEGFVPNFVAPAEAAMIN*
Ga0008090_1522705613300005363Tropical Rainforest SoilVHFELNGKSYVLNFNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPNIVAPAESSMIN*
Ga0066903_10778774513300005764Tropical Forest SoilVRTEVHFELNGKVYVLNFNPQDERWYLVTAGLGGMAKAIPVFEDEEGFVPNVVAPAESGMIN*
Ga0066903_10901883313300005764Tropical Forest SoilMLNFNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPNIVTPAQSAMIN*
Ga0075029_10133447613300006052WatershedsVHFELNGKSYMLNFNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPNIVVPAGAEGTPTIN*
Ga0116216_1062484433300009698Peatlands SoilVHFELNGQSYVLNFNPQDERWYLLTAGFGGRAKAIPVFNDEEGFVPNIVVPAEGEG
Ga0123355_1021098443300009826Termite GutVHFELNGKSYVLNFNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPNIVTPAESAMIN*
Ga0126373_1005739743300010048Tropical Forest SoilVHFELNGKAYVLNFNPQDERWYLLTAGLDGMAKAIPVFEDEEGFVPNIVTPAESAMIN*
Ga0126373_1101189423300010048Tropical Forest SoilVHFELNGKAYMLNFNPQDERWYLLTAGQGGMAKAIPVFEDEEGFVPNVVAPAESAMIN*
Ga0126373_1219094223300010048Tropical Forest SoilMVRTEVHFELNGKSYVLNFNPQDERWYLVTAGVGGMAKAIPVFEDEEGFVPNMVAPAESAMIN*
Ga0126378_1056731413300010361Tropical Forest SoilMRSEVHFELNGRSYVLNWNPQDERWYLVTAGLGGMAKAIPVLEDEEGFVPNFVAPAEAAMIN*
Ga0126378_1078899223300010361Tropical Forest SoilVRKEVHFELNGKSYMLNFNSQDERWYLLTAGLGGMAKAIPVFEDEEGFVPSIVTPTESASIN*
Ga0126378_1106252023300010361Tropical Forest SoilVHFELNGKAYVLNFNPEDERWYLVTAGLGGLAKAIPVFEDEEGFVPNVVAPAESAMIN*
Ga0126378_1138919623300010361Tropical Forest SoilMLNFNPQDERWYLLTAGQGGMAKAIPVFEDEEGFVPNVVAPAESAMIN*
Ga0126379_1108752413300010366Tropical Forest SoilVHFELNGKVYVLNFNPQDERWYLVTAGLGGMAKAIPVFEDEEGFVPNVVAPAESGMIN*
Ga0126381_10021906123300010376Tropical Forest SoilVHFELNGKSYVLNFNPQDERWYLVTAGLGGLAKAIPVFEDEEGFVPNVVAPAESGMIN*
Ga0126381_10055578923300010376Tropical Forest SoilMRTEVHFELNGKSYMLNFNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPNIVTPAESAMIN*
Ga0126381_10113654013300010376Tropical Forest SoilVRIEVHFELNGKSYVLNFNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPNIVTPAESAMIN*
Ga0126381_10168039323300010376Tropical Forest SoilVHFELNGKSYVLNFNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPNVVAPAESAMIN*
Ga0126381_10380447913300010376Tropical Forest SoilMRTEVHFELNGKSYMLNFNPQDERWYLLTAGQGGMAKAIPVFEDEEGFVPNIVTPAESAMIN*
Ga0136449_100056503103300010379Peatlands SoilVHFELNGQSYVLNFNPQDERWYLLTAGFGGRAKAIPVFNDEEGFVPNIVVPAEGEGSGRIN*
Ga0126383_1167041423300010398Tropical Forest SoilVHFELNGKSYVLNWNPQDERWYLVTAGQGGMAKAIPVFEDEEGFVPSIVAPAEGSARVN*
Ga0126369_1052136623300012971Tropical Forest SoilMLNFNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPNIVTPAESAMIN*
Ga0126369_1176707113300012971Tropical Forest SoilVQFELNGKSYILNWNPQDERWYLVTAGVGGMAKAIPVFEDEEGFVPNVVAPAESAMIN*
Ga0126369_1188280223300012971Tropical Forest SoilVHFELNGKVYVLNFNPQDERWYLVTAGLGGMAKAIPVFEDEEGFVPTVVAPAESGIIN*
Ga0181526_1008815923300014200BogMLNFNPQDERWYLLTAGVGGMAKAIPVLEDEDGFVPNIVVPMASEGTGSVN*
Ga0182036_1080006623300016270SoilVHFELNGKSYMLNFNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPSIVTPTESASIN
Ga0182041_1122536423300016294SoilVHFELNGKSYMLNWNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPNMVAPAEEDAPLSI
Ga0182033_10001687113300016319SoilVHFELNGKSYVLNWNPQDERWYLVTAGLGGMAKAIPVLEDEEGFVPNFVAPAEAAMIN
Ga0182032_1017615713300016357SoilGKSYMLNFNPQDERWYLLTAGLNGMAKAIPVFNDEEGFVPNIVVPASGESSATVN
Ga0182032_1027303223300016357SoilMLNFNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPNIVTPAESAMIN
Ga0182034_1013692723300016371SoilVRTEVNFELNGKSYMLNFNPQDERWYLLTAGLNGMAKAIPVFNDEEGFVPNIVVPASGESSATVN
Ga0182034_1070184823300016371SoilVHFELNGKSYMLNGNPQDERWYLVTAGLGGMAKAIPVFEDEEGFVPNMVAPAEEDAPLSI
Ga0182034_1130360913300016371SoilNGKSYVLNFNPQDERWYLLTAGLGGMAKAIPVFNDEEGFVPNIVVPAEGTGSVN
Ga0182037_1091629013300016404SoilVHFELNGKSYMLNFNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPSI
Ga0182037_1179635413300016404SoilMLNWNPQDERWYLVTAGPRGMAKAIPVFEDEEGFVPNVVAPAETEGSKYIN
Ga0182037_1205848213300016404SoilYMLNFNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPNIVTPAESAMIN
Ga0182038_1052734813300016445SoilLNGKSYMLNWNPQDERWYLVTAGLGGMAKAIPVFEDEEGFVPNMVAPAEEDAPLSIN
Ga0210383_1000782593300021407SoilVHFELNGKSYMLNFNPQDERWYLLTAGLSGMAKAIPVFEDEEGFVPNIVVPTASEGTGSV
Ga0126371_10017527103300021560Tropical Forest SoilMRSEVHFELNGKSYVLNWNPQDERWYLVTAGLGGMAKAIPVLEDEEGFVPNFVAPAEAAMIN
Ga0126371_1016939823300021560Tropical Forest SoilVHFELNGRSYVLNWNPQDERWYLVTAGLGGMAKAIPVLEDEEGFVPNFVAPAEAAMIN
Ga0126371_1170452613300021560Tropical Forest SoilVRIEVNFELHGKSYILNFNPEDERWYLVTAGPRGMAKAIPVFEDEEGFVPNIVTPEADGAKYIN
Ga0126371_1174368423300021560Tropical Forest SoilMRTEVHFELNGKSYMLNFNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPNIVTPAESAMIN
Ga0209448_1000335153300027783Bog Forest SoilVHFELNGQSYVLNFNPQDERWYLLTAGLGGRAKAIPVFNDEEGFVPNIVVPAEGEGSGRI
Ga0209656_10002463113300027812Bog Forest SoilVHFELNGQSYVLNFNPQDERWYLLTAGLGGRAKAIPVFNDEEGFVPNFVVPAESEGTGRV
Ga0209656_1001749243300027812Bog Forest SoilVHFELNGQSYVLNFNPQDERWYLLTAGLGGRAKAIPVFNDEEGFVPNIVVPAESEGSGRV
Ga0209040_1039905313300027824Bog Forest SoilVLNFNPQDERWYLLTAGLSGRPKAIPVLEDEEGFVPNIVVPTESEGTGRVN
Ga0318534_1048494413300031544SoilSYMLNFNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPNIVTPAESAMIN
Ga0318534_1060783713300031544SoilVNFELNGKSYMLNFNPQDERWYLLTAGLNGMAKAIPVFNDEEGFVPNIVVPASGESSATV
Ga0318541_1010266313300031545SoilVHFELNGKSYVLNFNPQDERWYLLTAGLGGMAKAIPVFNDEEGFVPNIVVPAEGTGSVN
Ga0318541_1028464123300031545SoilVNFELNGKSYMLNFNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPNIVAPAESSMIN
Ga0318541_1036783523300031545SoilVHFELNGKSYMLNFNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPNIVTPAESAMIN
Ga0318573_1008590423300031564SoilMLNWNPQDERWYLVTAGPRGMAKAIPVFEDEEGFVPNIVAPVESAMIN
Ga0310915_1006924123300031573SoilMADSRPAERVKTEVHFELNGKSYMLNFNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPNIVTPAESAMIN
Ga0306918_1126466113300031744SoilHFELNGKSYVLNFNPQDERWYLLTAGLGGMAKAIPVFNDEEGFVPNIVVPAEGTGSVN
Ga0318546_1038378523300031771SoilMLNFNPQDERWYLLTAGLNGMAKAIPVFNDEEGFVPNIVVPASGESSATVN
Ga0318557_1030584313300031795SoilLSYMLNWNPQDERWYLVTAGPRGMAKAIPVFEDEEGFVPNIVAPVESAMIN
Ga0310917_1098037323300031833SoilRVRTEVHFELNGKSYMLNFNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPSIVTPTESASIN
Ga0306925_1020045413300031890SoilVHFELNGKSYMLNWNPQDERWYLVTAGLGGMAKAIPVFEDEEGFVPNMVAPAEEDAPLSI
Ga0318551_1047995813300031896SoilVHFELNGKSYVLNFNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPNVVVPTEGEATVN
Ga0306923_1003000443300031910SoilMRTAVHFELNGKSYMLNWNPQDERWYLVTAGLGGMAKAIPVFEDEEGFVPNMVAPAEEDAPLSIN
Ga0306923_1009130533300031910SoilMLNFNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPSIVTPTESASIN
Ga0306923_1207054513300031910SoilMLNFNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPNIVTPAQSAMIN
Ga0306921_1029940423300031912SoilMLNWNPQDERWYLVTAGPRGMAKAIPVFEDEEGFVPNIVAP
Ga0306921_1261121013300031912SoilLNFNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPNIVAPAESSMIN
Ga0310912_1024970713300031941SoilVNFELNGKSYMLNFNPQDERWYLLTAGLNGMAKAIPVFNDEEGFVPNIVVPASGESS
Ga0310912_1042738823300031941SoilHFELNGKSYMLNWNPQDERWYLVTAGLGGMAKAIPVFEDEEGFVPNMVAPAEEDAPLSIN
Ga0310912_1090394523300031941SoilVHFELNGKSYVLNFNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPNIVAPAESSMIN
Ga0310916_1024662513300031942SoilTEVHFELNGKSYMLNFNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPNIVTPAESAMIN
Ga0310916_1077417023300031942SoilEIGGIGLEVRTEVHFELNGKSYVLNFNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPNIVAPAESSMIN
Ga0310913_1013980823300031945SoilEVHFELNGKSYVLNFNPQDERWYLLTAGLGGMAKAIPVFNDEEGFVPNIVVPAEGTGSVN
Ga0310913_1104182123300031945SoilNGKSYMLNFNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPNIVTPAESAMIN
Ga0318563_1080878413300032009SoilSYMLNWNPQDERWYLVTAGPRGMAKAIPVFEDEEGFVPNIVAPVESAMIN
Ga0318545_1037705813300032042SoilSEVHFELNGKSYVLNWNPQDERWYLVTAGLGGMAKAIPVLEDEEGFVPNFVAPAEAAMIN
Ga0318510_1014282313300032064SoilVLNWNPQDERWYLVTAGLGGMAKAIPVLEDEEGFVPNFVAPAEAAMIN
Ga0306924_1136351223300032076SoilLNWNPQDERWYLVTAGLGGMAKAIPVFEDEEGFVPNMVAPAEEDAPLSIN
Ga0311301_1177964513300032160Peatlands SoilVHFELNGQSYVLNFNPQDERWYLLTAGFGGRAKAIPVFNDEEGFVPNIVVPAEGEGSGRI
Ga0306920_10158151623300032261SoilVHFELNGKSYMLNFNPQDERWYLLTAGPGGMAKAIPVFEDEEGFVPNVVAPAESASIN
Ga0306920_10268186813300032261SoilNWNPQDERWYLVTAGPRGMAKAIPVFEDEEGFVPNIVAPVESAMIN
Ga0306920_10273064413300032261SoilVHFELNGKSYMLNWNPEDERWYLVTAGRGGMAKCIPVFEDEEGFVPNMVAPAES
Ga0335085_1009826923300032770SoilVHFELNGKSYMLNFNPQDERWYLVTAGAGGLAKAIPVFEDEEGFVPNVVAPAESAMIN
Ga0335085_1045931823300032770SoilMRPLSQARVNAKGEWRMADSQRVRKKVHFELNGKAYMLNWNPQDERWYLVTAGLGGMAKAIPVLEDEEGFVPNVVAPAESGMIN
Ga0335082_1081735423300032782SoilVHFELNGKSYVLNFNPQDERWYLVTAGLGGMAKAIPVFNDEEGFVPNIVVPADDKGSPTI
Ga0335079_1016046823300032783SoilVRIEVHFELNGKSYVLNFNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPNVVAPAESGMIN
Ga0335080_1009440633300032828SoilVHFELNGKSYVLNFNPQDERWYLLTAGLGGMAKAIPVFEDEEGFVPNVVAPAESGMIN
Ga0335070_1002005083300032829SoilMLNWNPQDERWYLVTAGSGGMAKAIPVFEDEEGFVPNVVAPAESAMIN
Ga0335070_1014353433300032829SoilVHFELYGQPYMLNFDPQDERWYLLTEGFRGQVKAVPVFNDEEGFVPNIVAPAMGEGTGSI
Ga0335070_1021718313300032829SoilWRVRTEVHFELHGKSYMLNFNPQDERWYLVTAGIGGMAKAIPVFEDEEGFVPNVVAPTESGMIN
Ga0335070_1064590923300032829SoilMGWRVRTEVHFELHGKSYMLNFNPQDERWYLVTAGIGGMAKAIPVFEDEEGFVPNVVAPTESGMIN
Ga0335069_1004391773300032893SoilVHFELKGKSYMLNWNPQDERWYLVTAGSGGMAKAIPVFEDEEGFVPNVVAPAESAMIN
Ga0335069_1034929013300032893SoilMLNFNPQDERWYLLTEGFRGQVKAVPVFNDEEGFVPNIVAPAMGEGTGSIN
Ga0335069_1086025223300032893SoilMLNFNPQDERWYLLTEGFRGQVKAVPVFNDEAGFVPSIVVSAMGEGTGSIN
Ga0335069_1154686423300032893SoilVHFELHGKSYMLNFNPQDERWYLVTAGIGGMAKAIPVFEDEEGFVPNVVAPTESGMIN
Ga0335071_1010241923300032897SoilMLNFDPQDERWYLLTEGFRGQVKAVPVFNDEEGFVPNIVAPAMGEGTGSIN
Ga0335083_1009046523300032954SoilVHFELNGKSYVLNFNPQDERWYLLTAGLGGMAKAIPVFNDEEGFVPNIVVPADDKGSPTI


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