NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F096426

Metagenome Family F096426

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F096426
Family Type Metagenome
Number of Sequences 104
Average Sequence Length 67 residues
Representative Sequence MDNFRTGLKGRTNHRVLLLSLTAFLVALGIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHV
Number of Associated Samples 63
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 95.19 %
% of genes near scaffold ends (potentially truncated) 99.04 %
% of genes from short scaffolds (< 2000 bps) 97.12 %
Associated GOLD sequencing projects 56
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (50.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(44.231 % of family members)
Environment Ontology (ENVO) Unclassified
(78.846 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(65.385 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 31.25%    β-sheet: 15.62%    Coil/Unstructured: 53.12%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF05694SBP56 9.62
PF00873ACR_tran 6.73
PF02321OEP 6.73
PF00581Rhodanese 4.81
PF13442Cytochrome_CBB3 0.96
PF01850PIN 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG1538Outer membrane protein TolCCell wall/membrane/envelope biogenesis [M] 13.46


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms53.85 %
UnclassifiedrootN/A46.15 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005332|Ga0066388_101529015All Organisms → cellular organisms → Bacteria1169Open in IMG/M
3300005764|Ga0066903_106416379All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300009792|Ga0126374_10335911All Organisms → cellular organisms → Bacteria → Acidobacteria1029Open in IMG/M
3300010046|Ga0126384_11386787Not Available655Open in IMG/M
3300010048|Ga0126373_10402664Not Available1393Open in IMG/M
3300010048|Ga0126373_12264790Not Available604Open in IMG/M
3300010360|Ga0126372_10298441Not Available1414Open in IMG/M
3300010360|Ga0126372_10966979Not Available860Open in IMG/M
3300010376|Ga0126381_101345527Not Available1032Open in IMG/M
3300010376|Ga0126381_101929018All Organisms → cellular organisms → Bacteria → Acidobacteria852Open in IMG/M
3300010376|Ga0126381_102480679Not Available743Open in IMG/M
3300010376|Ga0126381_104931492Not Available512Open in IMG/M
3300012971|Ga0126369_11501831Not Available763Open in IMG/M
3300016270|Ga0182036_10233261All Organisms → cellular organisms → Bacteria → Acidobacteria1368Open in IMG/M
3300016270|Ga0182036_10453663All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1008Open in IMG/M
3300016270|Ga0182036_11571058Not Available553Open in IMG/M
3300016294|Ga0182041_10113574All Organisms → cellular organisms → Bacteria → Acidobacteria2018Open in IMG/M
3300016294|Ga0182041_10595516All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium971Open in IMG/M
3300016294|Ga0182041_10824282Not Available830Open in IMG/M
3300016294|Ga0182041_10952179Not Available774Open in IMG/M
3300016319|Ga0182033_10187180All Organisms → cellular organisms → Bacteria → Acidobacteria1635Open in IMG/M
3300016319|Ga0182033_10682579Not Available898Open in IMG/M
3300016319|Ga0182033_11711780Not Available570Open in IMG/M
3300016319|Ga0182033_11813706Not Available554Open in IMG/M
3300016341|Ga0182035_10276754All Organisms → cellular organisms → Bacteria → Acidobacteria1366Open in IMG/M
3300016341|Ga0182035_10411556All Organisms → cellular organisms → Bacteria → Acidobacteria1138Open in IMG/M
3300016341|Ga0182035_10699467All Organisms → cellular organisms → Bacteria → Acidobacteria883Open in IMG/M
3300016371|Ga0182034_11019372Not Available715Open in IMG/M
3300016371|Ga0182034_12020029Not Available509Open in IMG/M
3300016387|Ga0182040_10127772All Organisms → cellular organisms → Bacteria1775Open in IMG/M
3300016387|Ga0182040_10625017Not Available874Open in IMG/M
3300016404|Ga0182037_10103241All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium2057Open in IMG/M
3300016404|Ga0182037_11586476Not Available582Open in IMG/M
3300016422|Ga0182039_10203445Not Available1581Open in IMG/M
3300016422|Ga0182039_10263205All Organisms → cellular organisms → Bacteria → Acidobacteria1411Open in IMG/M
3300016422|Ga0182039_10269189All Organisms → cellular organisms → Bacteria → Proteobacteria1397Open in IMG/M
3300016422|Ga0182039_10986701All Organisms → cellular organisms → Bacteria → Acidobacteria755Open in IMG/M
3300016422|Ga0182039_11651089All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium586Open in IMG/M
3300016422|Ga0182039_11907103Not Available546Open in IMG/M
3300016422|Ga0182039_11997527Not Available533Open in IMG/M
3300016445|Ga0182038_10613201All Organisms → cellular organisms → Bacteria → Acidobacteria940Open in IMG/M
3300016445|Ga0182038_10780025Not Available837Open in IMG/M
3300016445|Ga0182038_10937266All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium764Open in IMG/M
3300021560|Ga0126371_10324452All Organisms → cellular organisms → Bacteria → Acidobacteria1670Open in IMG/M
3300021560|Ga0126371_10658150All Organisms → cellular organisms → Bacteria → Acidobacteria1196Open in IMG/M
3300026824|Ga0207723_102569All Organisms → cellular organisms → Bacteria1581Open in IMG/M
3300026849|Ga0207804_118651Not Available618Open in IMG/M
3300026868|Ga0207818_1024645All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300026910|Ga0207840_1013768Not Available830Open in IMG/M
3300026941|Ga0207741_1013821Not Available915Open in IMG/M
3300027003|Ga0207722_1008144All Organisms → cellular organisms → Bacteria1255Open in IMG/M
3300027043|Ga0207800_1051486Not Available553Open in IMG/M
3300031545|Ga0318541_10147829Not Available1288Open in IMG/M
3300031668|Ga0318542_10442638All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon673Open in IMG/M
3300031679|Ga0318561_10270376All Organisms → cellular organisms → Bacteria → Acidobacteria928Open in IMG/M
3300031680|Ga0318574_10634259Not Available626Open in IMG/M
3300031682|Ga0318560_10043551All Organisms → cellular organisms → Bacteria → Acidobacteria2185Open in IMG/M
3300031719|Ga0306917_10178012All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1597Open in IMG/M
3300031719|Ga0306917_10218621All Organisms → cellular organisms → Bacteria → Acidobacteria1449Open in IMG/M
3300031724|Ga0318500_10118915Not Available1219Open in IMG/M
3300031736|Ga0318501_10072879Not Available1662Open in IMG/M
3300031744|Ga0306918_10143864Not Available1754Open in IMG/M
3300031763|Ga0318537_10185476Not Available775Open in IMG/M
3300031768|Ga0318509_10404237Not Available764Open in IMG/M
3300031771|Ga0318546_10392115All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium969Open in IMG/M
3300031781|Ga0318547_10342286Not Available913Open in IMG/M
3300031781|Ga0318547_10344371Not Available910Open in IMG/M
3300031792|Ga0318529_10219993All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium882Open in IMG/M
3300031799|Ga0318565_10413285All Organisms → cellular organisms → Bacteria → Acidobacteria654Open in IMG/M
3300031819|Ga0318568_10223075All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1165Open in IMG/M
3300031819|Ga0318568_10773433All Organisms → cellular organisms → Bacteria → Acidobacteria596Open in IMG/M
3300031833|Ga0310917_10148485All Organisms → cellular organisms → Bacteria → Acidobacteria1545Open in IMG/M
3300031833|Ga0310917_10418491Not Available911Open in IMG/M
3300031846|Ga0318512_10486888Not Available625Open in IMG/M
3300031890|Ga0306925_10307301All Organisms → cellular organisms → Bacteria → Acidobacteria1705Open in IMG/M
3300031890|Ga0306925_10575033All Organisms → cellular organisms → Bacteria → Acidobacteria1192Open in IMG/M
3300031910|Ga0306923_10513112All Organisms → cellular organisms → Bacteria → Acidobacteria1354Open in IMG/M
3300031910|Ga0306923_10519756All Organisms → cellular organisms → Bacteria → Acidobacteria1344Open in IMG/M
3300031910|Ga0306923_10542454All Organisms → cellular organisms → Bacteria → Acidobacteria1311Open in IMG/M
3300031912|Ga0306921_10671200All Organisms → cellular organisms → Bacteria → Acidobacteria1193Open in IMG/M
3300031912|Ga0306921_10864431All Organisms → cellular organisms → Bacteria → Acidobacteria1029Open in IMG/M
3300031941|Ga0310912_11013628Not Available636Open in IMG/M
3300031941|Ga0310912_11501429Not Available507Open in IMG/M
3300031942|Ga0310916_10661432All Organisms → cellular organisms → Bacteria → Acidobacteria885Open in IMG/M
3300031945|Ga0310913_10245389All Organisms → cellular organisms → Bacteria → Acidobacteria1257Open in IMG/M
3300031946|Ga0310910_11587018All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium500Open in IMG/M
3300031947|Ga0310909_10186822Not Available1717Open in IMG/M
3300032001|Ga0306922_11404933Not Available701Open in IMG/M
3300032001|Ga0306922_11862987All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300032035|Ga0310911_10112316All Organisms → cellular organisms → Bacteria → Acidobacteria1505Open in IMG/M
3300032041|Ga0318549_10558073Not Available514Open in IMG/M
3300032052|Ga0318506_10091442Not Available1291Open in IMG/M
3300032052|Ga0318506_10429635Not Available586Open in IMG/M
3300032054|Ga0318570_10478057All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon568Open in IMG/M
3300032059|Ga0318533_10707040Not Available740Open in IMG/M
3300032063|Ga0318504_10312178Not Available745Open in IMG/M
3300032064|Ga0318510_10379132All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon600Open in IMG/M
3300032066|Ga0318514_10550053All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium615Open in IMG/M
3300032076|Ga0306924_11151081All Organisms → cellular organisms → Bacteria → Acidobacteria842Open in IMG/M
3300032261|Ga0306920_100802812All Organisms → cellular organisms → Bacteria → Acidobacteria1381Open in IMG/M
3300032261|Ga0306920_100931138All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium F42-011269Open in IMG/M
3300032261|Ga0306920_101511674All Organisms → cellular organisms → Bacteria → Acidobacteria958Open in IMG/M
3300033289|Ga0310914_10296294All Organisms → cellular organisms → Bacteria → Acidobacteria1458Open in IMG/M
3300033289|Ga0310914_10749010Not Available874Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil44.23%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil34.62%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil12.50%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil8.65%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300026824Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 27 (SPAdes)EnvironmentalOpen in IMG/M
3300026849Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 46 (SPAdes)EnvironmentalOpen in IMG/M
3300026868Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 32 (SPAdes)EnvironmentalOpen in IMG/M
3300026910Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 65 (SPAdes)EnvironmentalOpen in IMG/M
3300026941Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 39 (SPAdes)EnvironmentalOpen in IMG/M
3300027003Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 26 (SPAdes)EnvironmentalOpen in IMG/M
3300027043Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 11 (SPAdes)EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031763Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29EnvironmentalOpen in IMG/M
3300031768Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031792Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23EnvironmentalOpen in IMG/M
3300031799Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031846Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032041Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032054Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032063Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17EnvironmentalOpen in IMG/M
3300032064Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0066388_10152901513300005332Tropical Forest SoilMQNFRTGLKRRSNHRVLLLSLTAFPVALGISLLRPRPIMAQDQQVQVIELKAKKYEYVPSPV
Ga0066903_10641637913300005764Tropical Forest SoilMENFRTGLKRRTNQRVLLLCLTPFLVALGIYLLQPRPITAQDQQVQVVE
Ga0126374_1033591123300009792Tropical Forest SoilMFNSLKERRMDNFRTGLKGRTNHRVLMLSLTAFLVALVIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVKSGSKVQLKITA
Ga0126384_1138678713300010046Tropical Forest SoilMENFRTGLKRRTKQRLLLLSLTAFLVVALGMYLVQPRPITAQDQQVQVVELKAKKYEYVPSPVHVKAGTKVQLKITAVD
Ga0126373_1040266413300010048Tropical Forest SoilMLSYRGCSILIKERRMENVRTGLKRRTNHRVLLLSLTAFLVAFGMYLLQPGPITAQDQQVQVVELKAKKYEYVPSPVHVKAGTKVQLKITA
Ga0126373_1226479023300010048Tropical Forest SoilMDNFRTSLKRRTNQRVLLLSLTAFLVALGIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVKAGTKVQLKITAVD
Ga0126372_1029844113300010360Tropical Forest SoilMFNSLKERRMDNFRTGLKGRTNHRVLLLSLTAFLVALGIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVKSGTK
Ga0126372_1096697933300010360Tropical Forest SoilVFTAFIKEKRMKNFRTGLKGRTNHRVLLLCLTAFLVALVIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVKSGTK
Ga0126381_10134552713300010376Tropical Forest SoilMENFRTSLKRRTNQRVLLLSLTAFLVALGIYLLQPRPITAQDQQVQVVELKAKKYEYVPS
Ga0126381_10192901813300010376Tropical Forest SoilMENFRTGLKGRTNQRVLLLSLTAFLVALGIYLLQPRPITAQDQQVQVVELKAKKYEYVPS
Ga0126381_10248067913300010376Tropical Forest SoilMENFRTGLKRRTKQRLLLLSLTAFLVVALGMYLVQPRPITAQDQQVQVVELKAKKYEYVPSPVHVKAGTKVQLKITAVDHDHG
Ga0126381_10493149223300010376Tropical Forest SoilMENFRTGLKRRTNQRVLLHSLTAFLVALGIYLLQPRRITAQDQQVQVVELKAKKYEYVSSPVH
Ga0126369_1150183113300012971Tropical Forest SoilMFNSLKERRMDNFRTGLKGRTNHRVLLLSLTAFLVALGIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPV
Ga0182036_1023326113300016270SoilMENFRKGLKRRTNHRVLLLCLTPFLVALGIYLLQPRPITAQDQQVQVVELKAKKYEY
Ga0182036_1045366313300016270SoilMENFRTGLKRRTNQRVLLLSLTAFLVAPGIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVKAGTKVQLKITAVDHDHGFKI
Ga0182036_1157105813300016270SoilMKNFRTGLKGRTNHRVLLLSLTAFLVALGIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVH
Ga0182041_1011357443300016294SoilMKNFRTGLKGRTNHRVLLLCLTAFLVALGVYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVK
Ga0182041_1059551613300016294SoilMENFRTGLKRRTNQRVLLLSLTAFLVAPGIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVKAGTKVQLKITAVDHDHGFKITTVP
Ga0182041_1082428213300016294SoilMKNFRTGLKRRTNQRVLLLCLTPFLVALGIYLLQPRPITAQDQQVQVVELKAKKYE
Ga0182041_1095217923300016294SoilMDNFRTGLTWRANRRVPLLSLIAFLVALGIYLLGPRPITAQDQQVQVVELKAKKYEYV
Ga0182033_1018718043300016319SoilMDNFRTGLKRRTNQRVLLLSLTAFLVALGIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVH
Ga0182033_1068257923300016319SoilMDNFRTGLTWRANRRVPLLSLIAFLVALGIYLLGPRPITAQDQQVQVVELKAKKYEYVPSPV
Ga0182033_1171178013300016319SoilMENFGSGLKGYANSRVLRLTLTAFLVALGMYLLQPRSITAQDQQVQVVELNAKKYEYAPSPVHVKAG
Ga0182033_1181370613300016319SoilMKNFRTGLKGRTNHRVLLLSLTAFLMALGIYLLQPRPITAQDQQVQVVELKAKKYEYVP
Ga0182035_1027675413300016341SoilMDNFRTGLKRRTNQRVLLLSLTAFLVALGIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVKA
Ga0182035_1041155633300016341SoilMKNFRTGLKGRTNHRVLLLSLTAFLMALGIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVKA
Ga0182035_1069946713300016341SoilMDNFRTGLKWRANNRVLLLSLTAFLVADGIYLLGPRPITAQDQQVQVVELKAKKYEY
Ga0182034_1101937213300016371SoilMKNFRTGLKRRTNQRVLLLCLTPFLVALGIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVKAGTKV
Ga0182034_1202002913300016371SoilMKNFRTGLKGRTNHRVLLLCLTAFLVALGVYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVKAGTKV
Ga0182040_1012777213300016387SoilMENFRTGLRRRTNHRVLLLSLTPFLVAFGMYLLQPGPITAQDQQVQVVELKAKKYEYVPSPVHVK
Ga0182040_1062501713300016387SoilMDNFRTGLKRRTNQRVLLLSLTAFLVALGIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVK
Ga0182037_1010324123300016404SoilMENFRTGLRRRTNHRVLLLSLTPFLVAFGMYLLQPGPITAQDQQVQVVELK
Ga0182037_1158647613300016404SoilMENFRTGLKRRANRRVLLLSLAAFLGMYLLQPRPISAQDQQVQVVELKAKKYEYVSSPVHVKAGTKVQLKIT
Ga0182039_1020344513300016422SoilMENFRTGLKRRTNQRVLLLSLTAFLVAPGIYLLQPRPITAQDQQVQVVELKAKKYEY
Ga0182039_1026320513300016422SoilMDNFRTGLKRRTNQRVLLLSLTAFLVALGIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVKAGTK
Ga0182039_1026918913300016422SoilMENSRTGLKRRTNHRVLLLGLTAFLVALGMYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVKAGTKVQLKITAVDHDHG
Ga0182039_1098670123300016422SoilMDNFRTGLKWRANNRVLLLSLTAFLVADGIYLLRPRPIRAQDQQVQVVELKAKKY
Ga0182039_1165108923300016422SoilMENFRTGLRRRTNHRVLLLSLTPFLVAFGMYLLQPGPITAQDQQVQVVELKAKKYEYVPSPVHV
Ga0182039_1190710313300016422SoilMENFRTGLKRHTNHRVLLLSLTAFLVALGMYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVKAGT
Ga0182039_1199752713300016422SoilMDNPRRGFKHCANHRVLLLSLTSAFLVALAMCLLQPRRITAQDQQVQVIELN
Ga0182038_1061320113300016445SoilMENFRTGLKRRTNQRVLLLSLTAFLVAPGIYLLQPRPITAQDQQVQVVELKAKKYEYVPS
Ga0182038_1078002513300016445SoilMKNFRTGLKRRTNQRVLLLCLTPFLVALGIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVH
Ga0182038_1093726623300016445SoilMGNFCSGLKQCANHRILLLRLAPSVMALSMHLLQPHPLKAQDQPVQVIELTAKKYEYVPSPIHVKAGTKVQLKITAVDHDHG
Ga0126371_1032445243300021560Tropical Forest SoilMKNFRTGLKGRTNHRVLLLCLTAFLVALGIYLLQPRPITAQDQQVQVVELKAKKYEYVPS
Ga0126371_1065815013300021560Tropical Forest SoilMDNFRTGLKGRTNHRVLLLCLTAFLVALVIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVKSGTK
Ga0207723_10256933300026824Tropical Forest SoilMENFRTGIKWRANHRVLLLGLTALLVALGMYLLQPRAITAQDQQVQVVELKAKKYEYVSSPVHVKAGTKVQLKITAVDHDHGFKIAT
Ga0207804_11865123300026849Tropical Forest SoilMENFRTGIKWRANHRVLLLGLTALLVALGMYLLQPRAITAQDQQVQVVELKAKKYEYVSSPVHVKAGTKVQLKIT
Ga0207818_102464513300026868Tropical Forest SoilMENFRTGIKWRANHRVLLLGLTALLVALGMYLLQPRAITAQDQQVQVVELKAKKYEYVSSPVHVKAGTKV
Ga0207840_101376823300026910Tropical Forest SoilMENFRTGIKWRANHRVLLLGLTALLVALGMYLLQPRAITAQDQQVQVVELKAKKYEYVSS
Ga0207741_101382113300026941Tropical Forest SoilMENFRTGIKWRANHRVLLLGLTALLVALGMYLLQPRAITAQDQQVQVVELKAKKYEYVSSPVHVKAG
Ga0207722_100814413300027003Tropical Forest SoilMENFRTGIKWRANHRVLLLGLTALLVALGMYLLQPRAITAQDQQVQVVELKAKKYEYVSSPVHVKAGTKVQLKITA
Ga0207800_105148623300027043Tropical Forest SoilMENCRTGLKRRTNRVLLLSLTAILVAVGMYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVKAGTKVQLKI
Ga0318541_1014782913300031545SoilMENFRTGLKRRTNQRVLLLSLTAFLVAPGIYLLQPRPITAQDQQVQVVELKAKKYE
Ga0318542_1044263813300031668SoilMENFRTGLKRRTNHRVLLLSLTAFLVALGMYLLQPGPITAQDQQVQVVELKAKKYEYVPS
Ga0318561_1027037623300031679SoilMENFRTGLKRRTNQRVLLLSLTAFLVAPGIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVKAGTKVQLKITAVDHDHG
Ga0318574_1063425913300031680SoilMKNFRTGLKGRTNHRVLLLGLTAFLVALGIYLLQPRPITAQDQEVQVVELKAKKYEY
Ga0318560_1004355113300031682SoilMKNFRTGLKGRTNHRVLLLGLTAFLVALGIYLLQPRPITAQDQEVQVVELKAKKYEYVPSPVHVKAGTKVQLKITAVDHDHG
Ga0306917_1017801213300031719SoilMENFRTGLRRRTNHRVLLLSLTPFLVAFGMYLLQPGPITAQDQQVQVVELKAKKYEYVPSPVHVRAGTKV
Ga0306917_1021862113300031719SoilMKNFRTGLKGRTNHRVLLLCLTAFLVALGVYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVKAGTKVQLKIT
Ga0318500_1011891513300031724SoilMENFRTGLKRRTNQRVLLLSLTAFLVAPGIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHV
Ga0318501_1007287923300031736SoilMENFRTGLKRRTNQRVLLLSLTAFLVAPGIYLLQPRPITAQDQQVQVVELKAKKYEYV
Ga0306918_1014386443300031744SoilMDNFRTGLKRRTNQRVLLLSLTAFLVALGIYLLQPRPITAQDQQVQVVELKAKKYEYVP
Ga0318537_1018547623300031763SoilMKNFRTGLKGRTNHRVLLLGLTAFLVALGIYLLQPRPITAQDQEVQVVELKAKKYEYVPSPVHVKAGTK
Ga0318509_1040423713300031768SoilMKNFRTGLKGRTNHRVLLLSLTAFLMALGIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVKSGTKVQLKITAVDHDHGF
Ga0318546_1039211513300031771SoilMDNFRTGLKGRTNHRVLLLSLTAFLVALGIYLLQPRPITAQDQQVQVVELKAKKYE
Ga0318547_1034228613300031781SoilMKNFRTGLKGRTNHRVLLLGLTAFLVALGIYLLQPRPITAQDQEVQVVELKAKKYEYVPSPVHVKAGTKVQ
Ga0318547_1034437123300031781SoilMENFRTGLKRRTNQRVLLLSLTAFLVAPGIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVKAGTKVQLK
Ga0318529_1021999313300031792SoilMENFRTGLKRRTNQRVLLLSLTAFLVAPGIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVRAGTKVQLKITAVDHDHGFK
Ga0318565_1041328513300031799SoilMDNFRTGLKGRTNHRVLLLSLTAFLVALGIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHV
Ga0318568_1022307513300031819SoilMENFRTGLKRRTNHRVLLLSLTAFLVALGMYLLQPGPITAQDQQVQVVELKAKKYEYVPSPVHVKAGTK
Ga0318568_1077343313300031819SoilMDNFRTGLKRRTNQRVLLLSLTAFLVALGIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHV
Ga0310917_1014848543300031833SoilMDNFRTGLKRRTNQRVLLLSLTAFLVALGIYLLQPRPITAQDQQVQVVELKAK
Ga0310917_1041849113300031833SoilMENFGTRLKWRANNRVLLLSLSAFLVALGMYLLRPRPITAQDQQVQVVELKAKKYEYVPSPVHVKAGAKVQLK
Ga0318512_1048688813300031846SoilMKNFRTGLKGRTNHRVLLLSLTAFLVALGIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVKAGTKVQLKITAVD
Ga0306925_1030730133300031890SoilMDNFRTGLKGRTNHRVLLLSLTAFLVALGIYLLQPRPITAQDQQVQVVELKAKKYEYVP
Ga0306925_1057503313300031890SoilMKNFRTGLKGRTNHRVLLLSLTAFLMALGIYLLQPRPITAQDQQVQVVELKAKKYEY
Ga0306923_1051311233300031910SoilMDNFRTGLKRRTNQRVLLLSLTAFLVALGIYLLQPRPITAQDQQVQVVELKAKKY
Ga0306923_1051975633300031910SoilMKNFRTGLKGRTNHRVLLLSLTAFLMALGIYLLQPRPITAQDQQVQVVELK
Ga0306923_1054245413300031910SoilMDNFRTGLKGRTNHRVLLLSLTAFLVALGIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPV
Ga0306921_1067120023300031912SoilMKNFRTGLKGRTNHRVLLLCLTAFLVALGVYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVKAGTKVQ
Ga0306921_1086443123300031912SoilMENFRTGLKRHTNHRVLLLSLTAFLVALGMYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVKAGTNVQLKITAVDHDHGFKIRT
Ga0310912_1101362813300031941SoilMDNFRTGLKRRTNQRVLLLSLTAFLVALGIYLLQPRPITAQDQQVQVVELKA
Ga0310912_1150142913300031941SoilMKNFRTGLKRRTNQRVLLLCLTPFLVALGIYLLQPRPITAQDQQVQVVELK
Ga0310916_1066143213300031942SoilMENFRTGLKRHTNHRVLLLSLTAFLVALGMYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVKAGTNV
Ga0310913_1024538913300031945SoilMKNFRTGLKGRTNHRVLLLCLTAFLVALGVYLLQPRPITAQDQQVQVVELKAKKYEYVPS
Ga0310910_1158701813300031946SoilMEHFKWCAKRRVLLLSLTGSLVALGVCLLQPRRIMAQDQQVQVVELKAKKYEYVPSPVHVKAGTKVQLKITAVDHDHGFKIT
Ga0310909_1018682213300031947SoilMDNFRTGLKRRTNQRVLLLSLTAFLVALGIYLLQPRPITAQDQQVQVVELKAKKYE
Ga0306922_1140493313300032001SoilMDNFRTGLKGRTNHRVLLLSLTAFLVALGIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVKAGTKVQLKITAVDHDH
Ga0306922_1186298713300032001SoilMDNFRTGLKRRTNHPVLLLSLTAFLVALSMYLLQPGPITAQDQQVQVVELK
Ga0310911_1011231643300032035SoilMKNFRTGLKGRTNHRVLLLSLTAFLMALGIYLLQPRPITAQDQQVQVVELKAK
Ga0318549_1055807313300032041SoilMENFRTGLKRRTNHRVLLLSLTAFLVALGMYLLQPGPITAQDQQVQVVELKAKKYEYVPSPVHVKAGTKVQLKITAVDHDH
Ga0318506_1009144223300032052SoilMENFRTGLKRRTNHRVLLLSLTAFLVALGMYLLQPGPITAQDQQVQVVELKAKKYE
Ga0318506_1042963523300032052SoilMENSRTGLKRRTNHRVLLLGLTAFLVALGIYLLQPRPITAQDQEVQVVELKAKKYEYVPSPVHVKAGTKVQLKI
Ga0318570_1047805713300032054SoilMENFRTGLKRRTNHRVLLLSLTAFLVALGMYLLQPGPITAQDQQVQVVELKAKKYEYVPSPVHVKAGTKVQLK
Ga0318533_1070704013300032059SoilMKNFRTGLKGRTNHRVLLLSLTAFLVALGIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVKAGTKVQLKITAVDHD
Ga0318504_1031217813300032063SoilMKNFRTGLKGRTNHRVLLLSLTAFLVALGIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVKAGTKVQLK
Ga0318510_1037913223300032064SoilMKNFRTGLKGRTNHRVLLLSLTAFLVALGIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPVHVKAGTKV
Ga0318514_1055005313300032066SoilMKNFRTGLKGRTNHRVLLLGLTAFLVALGIYLLQPRPITAQDQEVQVVELKAKKYEYVPSPVHVKAGTKVQLKITAVDHDHGFKITTVF
Ga0306924_1115108133300032076SoilMKNFRTGLKGRTNHRVLLLSLTAFLMALGIYLLQPRPITAQDQQVQVVELKAKKYEYV
Ga0306920_10080281223300032261SoilMKNFRTGLKRRTNQRVLLLCLTPFLVALGIYLLQPRPITAQDQQVQVVELKA
Ga0306920_10093113813300032261SoilMDNFRTGLKRRTNHPVLLLSLTAFLVALSMYLLQPGPITAQDQQVQVVELKAKKYEYVPSPVHVKAG
Ga0306920_10151167413300032261SoilMDNFRTGLKGRTNHRVLLLSLTAFLVALGIYLLQPRPITAQDQQVQVVELKAKKYEYVPS
Ga0310914_1029629413300033289SoilMKNFRTGLKGRTNHRVLLLSLTAFLMALGIYLLQPRPITAQDQQVQVVELKAKKYEYVPSPV
Ga0310914_1074901013300033289SoilMKNFRTGLKRRTNQRVLLLCLTPFLVALGIYLLQPRPITAQDQQVQVVELKAKKY


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.